F262228

General Info

Members Datasets Scaffolds Average Seq Length
173 127 346 480

Family's Representative Sequence

Representative Sequence 3300005518|Ga0070699_100145420|Ga0070699_1001454202
Length 519
Sequence MRLLADASREQITLDYDSLYVGGEWITPASSSKITVVSASTEQVIGHVPEAVEADVDAAVGAARRAFDDPNGWAHWEPARRAAAMERLASALDKRAGEMVQRISSQNGMPVAVASQLEAVFPALLLRYYAGLVKDDTFEENRPGMLGGATLVRREPLGVVGAIVPWNFPQSLAFFKLAPALAAGCTVVLKPASETVLDSYLAAEAIAEAELPAGVVNIVPGGRGMGAYLVSHPQVDKIAFTGSTQAGRSIAETCGRLLRPVTLELGGKSAGIVLDDADLDLSKVAQQMFTATLLNNGQTCFLCTRVLAPRSRYGEIVDIFSGLAGALKVGDPLDASTQIGPMVSERQRQRVEGYIAKGRSEGARITVGGGRPRGLDKGWFVEPTIFADVDNSYTIAQEEIFGPVLSVIPYSDVDEAVSIANASDYGLGGTVWTTDHGRGVEVAKRVQTGSIGINNYLPDPTAPFGGVKSSGLGRELGPEGLAAYLNFKSIYLPVKLQPLSPEARCLRSCATRARTEGEF

Samples

Sample ID Description Type Environment
1 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
2 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
58 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
60 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
61 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
62 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
63 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
64 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
65 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
66 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
67 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
68 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
69 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
70 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
71 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
72 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
73 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
74 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
75 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
76 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
77 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
78 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
79 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
80 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
81 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
82 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
83 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
84 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
85 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
86 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
87 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
88 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
89 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
90 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
91 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
92 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
93 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
94 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
101 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
102 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
103 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
104 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
105 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
106 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
107 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
108 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
109 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
110 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
111 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
112 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
113 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
114 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
115 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
116 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
117 2773857933 Frankia sp. BMG5.30 Isolate Nodule
118 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
119 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
120 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
121 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
122 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
123 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
124 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
125 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
126 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
127 8002784119 Frankia sp. AgB1.9 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 87.28
Metatranscriptomes 0
Isolates 12.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.56
Nodule 1.16
Rhizoplane 6.36
Rhizosphere 60.69
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070699_100145420 3300005518 Bacteria 2094
2 JGI24749J21850_1000081 3300002076 Bacteria 17395
3 JGI24749J21850_1000290 3300002076 Bacteria 7711
4 JGI24751J29686_10000643 3300002459 Bacteria 8915
5 Ga0055531_10003958 3300003794 Bacteria 9194
6 Ga0065707_10110324 3300005295 Bacteria 2430
7 Ga0070670_100000282 3300005331 Bacteria 44780
8 Ga0070682_100038382 3300005337 Bacteria 2938
9 Ga0070668_100024743 3300005347 Bacteria 4551
10 Ga0070669_100000243 3300005353 Bacteria 45185
11 Ga0070667_100000881 3300005367 Bacteria 27716
12 Ga0070667_100001413 3300005367 Bacteria 21486
13 Ga0070709_10051100 3300005434 Bacteria 2593
14 Ga0070714_100042811 3300005435 Bacteria 3827
15 Ga0070714_100069981 3300005435 Bacteria 3032
16 Ga0070714_100124785 3300005435 Bacteria 2294
17 Ga0070714_100141387 3300005435 Bacteria 2161
18 Ga0070710_10034335 3300005437 Bacteria 2759
19 Ga0070711_100087601 3300005439 Bacteria 2236
20 Ga0070708_100019310 3300005445 Bacteria 5725
21 Ga0070706_100013620 3300005467 Bacteria 7518
22 Ga0070706_100044461 3300005467 Bacteria 4103
23 Ga0070707_100001310 3300005468 Bacteria 24486
24 Ga0070707_100038256 3300005468 Bacteria 4581
25 Ga0070698_100000073 3300005471 Bacteria 75512
26 Ga0070698_100001705 3300005471 Bacteria 24505
27 Ga0070698_100069250 3300005471 Bacteria 3543
28 Ga0068853_100261805 3300005539 Bacteria 1590
29 Ga0068856_100258649 3300005614 Bacteria 1756
30 Ga0068864_100000289 3300005618 Bacteria 44780
31 Ga0068863_100004504 3300005841 Bacteria 13747
32 Ga0068862_100000073 3300005844 Bacteria 119632
33 Ga0070717_10033621 3300006028 Bacteria 4137
34 Ga0070717_10089018 3300006028 Bacteria 2603
35 Ga0070717_10094937 3300006028 Bacteria 2524
36 Ga0075368_10014301 3300006042 Bacteria 2929
37 Ga0075368_10043014 3300006042 Bacteria 1779
38 Ga0075363_100009235 3300006048 Bacteria 4632
39 Ga0070712_100065629 3300006175 Bacteria 2577
40 Ga0075367_10000039 3300006178 Bacteria 28753
41 Ga0075367_10000467 3300006178 Bacteria 15095
42 Ga0075370_10027381 3300006353 Bacteria 3162
43 Ga0105240_10078944 3300009093 Bacteria 4052
44 Ga0105247_10000139 3300009101 Bacteria 70312
45 Ga0105248_10000226 3300009177 Bacteria 64504
46 Ga0105248_10000493 3300009177 Bacteria 44891
47 Ga0105237_10037888 3300009545 Bacteria 4871
48 Ga0105249_10142346 3300009553 Bacteria 2301
49 Ga0105239_10005072 3300010375 Bacteria 15550
50 Ga0157370_10001096 3300013104 Bacteria 33957
51 Ga0157380_10000347 3300014326 Bacteria 27741
52 Ga0157379_10000696 3300014968 Bacteria 27279
53 Ga0209257_1000130 3300025304 Bacteria 212188
54 Ga0207692_10049662 3300025898 Bacteria 2118
55 Ga0207710_10000019 3300025900 Bacteria 339682
56 Ga0207684_10011144 3300025910 Bacteria 7871
57 Ga0207684_10117340 3300025910 Bacteria 2280
58 Ga0207693_10005414 3300025915 Bacteria 10659
59 Ga0207663_10046677 3300025916 Bacteria 2670
60 Ga0207646_10000510 3300025922 Bacteria 51977
61 Ga0207681_10000023 3300025923 Bacteria 229753
62 Ga0207650_10000029 3300025925 Bacteria 236660
63 Ga0207700_10011565 3300025928 Bacteria 5635
64 Ga0207664_10059065 3300025929 Bacteria 3053
65 Ga0207664_10074141 3300025929 Bacteria 2748
66 Ga0207664_10123172 3300025929 Bacteria 2173
67 Ga0207665_10013479 3300025939 Bacteria 5376
68 Ga0207711_10000176 3300025941 Bacteria 68725
69 Ga0207711_10010688 3300025941 Bacteria 7632
70 Ga0207668_10027777 3300025972 Bacteria 3690
71 Ga0207658_10001063 3300025986 Bacteria 22222
72 Ga0207658_10003203 3300025986 Bacteria 11650
73 Ga0207639_10054866 3300026041 Bacteria 3048
74 Ga0207641_10012578 3300026088 Bacteria 6937
75 Ga0207676_10000059 3300026095 Bacteria 119553
76 Ga0207676_10065833 3300026095 Bacteria 2887
77 Ga0209813_10000647 3300027866 Bacteria 7989
78 Ga0209813_10004732 3300027866 Bacteria 3264
79 Ga0268265_10000018 3300028380 Bacteria 285651
80 Ga0307515_10042809 3300028794 Bacteria 7068
81 Ga0307410_10186767 3300031852 Bacteria 1573
82 Ga0307407_10057499 3300031903 Bacteria 2256
83 Ga0316584_0031018 3300036712 Bacteria 3952
84 Ga0436364_0241950 3300037853 Bacteria 20551
85 Ga0466961_0019721 3300044693 Bacteria 4339
86 Ga0466967_0002055 3300045976 Bacteria 12296
87 Ga0495638_0001035 3300046460 Bacteria 27502
88 Ga0495638_0002466 3300046460 Bacteria 15063
89 Ga0495585_0018835 3300046492 Bacteria 3983
90 Ga0495583_0008776 3300046506 Bacteria 6130
91 Ga0495606_0015975 3300046507 Bacteria 5750
92 Ga0495666_0041521 3300046526 Bacteria 2227
93 Ga0495622_0066831 3300046557 Bacteria 1661
94 Ga0495625_0009658 3300046660 Bacteria 8042
95 Ga0495623_0001555 3300046679 Bacteria 15454
96 Ga0495589_0022261 3300046794 Bacteria 3234
97 Ga0495600_0047662 3300046809 Bacteria 2796
98 Ga0495581_0027620 3300047315 Bacteria 3291
99 Ga0495604_0001987 3300047317 Bacteria 16510
100 Ga0495672_0020361 3300047320 Bacteria 4350
101 Ga0495687_010067 3300047443 Bacteria 5217
102 Ga0495675_0026589 3300047444 Bacteria 3690
103 Ga0495685_000610 3300047447 Bacteria 10956
104 Ga0495684_0000537 3300047471 Bacteria 30804
105 Ga0496102_0000015 3300048905 Bacteria 304524
106 Ga0496102_0000062 3300048905 Bacteria 165967
107 Ga0496102_0000381 3300048905 Bacteria 52536
108 Ga0496102_0000846 3300048905 Bacteria 29425
109 Ga0496102_0004379 3300048905 Bacteria 11928
110 Ga0496102_0078565 3300048905 Bacteria 3038
111 Ga0496103_0000020 3300048906 Bacteria 234050
112 Ga0496103_0000073 3300048906 Bacteria 118430
113 Ga0496103_0001370 3300048906 Bacteria 16438
114 Ga0496104_0001986 3300048907 Bacteria 17735
115 Ga0496110_0031671 3300048913 Bacteria 4564
116 Ga0496116_0000139 3300048919 Bacteria 151501
117 Ga0496116_0001425 3300048919 Bacteria 26878
118 Ga0496117_0000047 3300048920 Bacteria 299632
119 Ga0496117_0001306 3300048920 Bacteria 36677
120 Ga0496117_0008692 3300048920 Bacteria 9599
121 Ga0496118_0000050 3300048921 Bacteria 244124
122 Ga0496118_0001247 3300048921 Bacteria 39110
123 Ga0496118_0001856 3300048921 Bacteria 30242
124 Ga0496118_0042024 3300048921 Bacteria 3611
125 Ga0496119_0000065 3300048922 Bacteria 164183
126 Ga0496119_0000649 3300048922 Bacteria 46945
127 Ga0496119_0031782 3300048922 Bacteria 3531
128 Ga0496120_0000815 3300048923 Bacteria 44637
129 Ga0496120_0024412 3300048923 Bacteria 3770
130 Ga0496121_0005504 3300048924 Bacteria 16197
131 Ga0496125_0108116 3300048928 Bacteria 2024
132 Ga0496126_0000049 3300048929 Bacteria 317568
133 Ga0496126_0016171 3300048929 Bacteria 7473
134 Ga0501034_0206377 3300049571 Bacteria 1921
135 Ga0501038_0169848 3300049574 Bacteria 1766
136 Ga0501047_0003212 3300049581 Bacteria 15501
137 Ga0501047_0168434 3300049581 Bacteria 2060
138 Ga0501035_0022814 3300049822 Bacteria 5747
139 Ga0501044_0004966 3300049823 Bacteria 14877
140 Ga0501044_0145868 3300049823 Bacteria 2352
141 Ga0501045_0159231 3300049824 Bacteria 1680
142 nmdc:mga03n38_890_c1 3300050490 Bacteria 8035
143 nmdc:mga0yw44_63252_c1 3300050492 Bacteria 2275
144 nmdc:mga06z11_1277_c1 3300050494 Bacteria 9317
145 nmdc:mga06z11_98_c1 3300050494 Bacteria 37465
146 nmdc:mga04h51_557_c1 3300050495 Bacteria 8872
147 nmdc:mga07m45_16265_c1 3300050496 Bacteria 3981
148 nmdc:mga07m45_23607_c1 3300050496 Bacteria 3363
149 Ga0500643_008470 3300053087 Bacteria 4038
150 Ga0500645_000006 3300053730 Bacteria 276677
151 Ga0500645_023027 3300053730 Bacteria 1911
152 2523387082 2523231044 Bacteria 6434991
153 2552107955 2551306166 Bacteria 9731570
154 2586063005 2585427649 Bacteria 9053857
155 2738665351 2738541264 Bacteria 5935393
156 2738702300 2738541274 Bacteria 6909446
157 2738704312 2738541274 Bacteria 6909446
158 2739144485 2738541356 Bacteria 5935017
159 2739331205 2738543028 Bacteria 6917070
160 2739331555 2738543028 Bacteria 6917070
161 2753036189 2751185725 Bacteria 5740550
162 2753324061 2751185792 Bacteria 5739090
163 2774903130 2773857933 Bacteria 5818019
164 2812352437 2811994878 Bacteria 5992952
165 2870629109 2870628048 Bacteria 3696012
166 2870786275 2870782633 Bacteria 9624083
167 2899365730 2899359706 Bacteria 10940472
168 2902804479 2902799365 Bacteria 5419524
169 2906801065 2906799679 Bacteria 4031749
170 2945956908 2945956166 Bacteria 5110334
171 2954007885 2954002825 Bacteria 9173742
172 2997604738 2997600082 Bacteria 9896405
173 8002789719 8002784119 Bacteria 9788632
174 Ga0070699_100145420
175 JGI24749J21850_1000081
176 JGI24749J21850_1000290
177 JGI24751J29686_10000643
178 Ga0055531_10003958
179 Ga0065707_10110324
180 Ga0070670_100000282
181 Ga0070682_100038382
182 Ga0070668_100024743
183 Ga0070669_100000243
184 Ga0070667_100000881
185 Ga0070667_100001413
186 Ga0070709_10051100
187 Ga0070714_100042811
188 Ga0070714_100069981
189 Ga0070714_100124785
190 Ga0070714_100141387
191 Ga0070710_10034335
192 Ga0070711_100087601
193 Ga0070708_100019310
194 Ga0070706_100013620
195 Ga0070706_100044461
196 Ga0070707_100001310
197 Ga0070707_100038256
198 Ga0070698_100000073
199 Ga0070698_100001705
200 Ga0070698_100069250
201 Ga0068853_100261805
202 Ga0068856_100258649
203 Ga0068864_100000289
204 Ga0068863_100004504
205 Ga0068862_100000073
206 Ga0070717_10033621
207 Ga0070717_10089018
208 Ga0070717_10094937
209 Ga0075368_10014301
210 Ga0075368_10043014
211 Ga0075363_100009235
212 Ga0070712_100065629
213 Ga0075367_10000039
214 Ga0075367_10000467
215 Ga0075370_10027381
216 Ga0105240_10078944
217 Ga0105247_10000139
218 Ga0105248_10000226
219 Ga0105248_10000493
220 Ga0105237_10037888
221 Ga0105249_10142346
222 Ga0105239_10005072
223 Ga0157370_10001096
224 Ga0157380_10000347
225 Ga0157379_10000696
226 Ga0209257_1000130
227 Ga0207692_10049662
228 Ga0207710_10000019
229 Ga0207684_10011144
230 Ga0207684_10117340
231 Ga0207693_10005414
232 Ga0207663_10046677
233 Ga0207646_10000510
234 Ga0207681_10000023
235 Ga0207650_10000029
236 Ga0207700_10011565
237 Ga0207664_10059065
238 Ga0207664_10074141
239 Ga0207664_10123172
240 Ga0207665_10013479
241 Ga0207711_10000176
242 Ga0207711_10010688
243 Ga0207668_10027777
244 Ga0207658_10001063
245 Ga0207658_10003203
246 Ga0207639_10054866
247 Ga0207641_10012578
248 Ga0207676_10000059
249 Ga0207676_10065833
250 Ga0209813_10000647
251 Ga0209813_10004732
252 Ga0268265_10000018
253 Ga0307515_10042809
254 Ga0307410_10186767
255 Ga0307407_10057499
256 Ga0316584_0031018
257 Ga0436364_0241950
258 Ga0466961_0019721
259 Ga0466967_0002055
260 Ga0495638_0001035
261 Ga0495638_0002466
262 Ga0495585_0018835
263 Ga0495583_0008776
264 Ga0495606_0015975
265 Ga0495666_0041521
266 Ga0495622_0066831
267 Ga0495625_0009658
268 Ga0495623_0001555
269 Ga0495589_0022261
270 Ga0495600_0047662
271 Ga0495581_0027620
272 Ga0495604_0001987
273 Ga0495672_0020361
274 Ga0495687_010067
275 Ga0495675_0026589
276 Ga0495685_000610
277 Ga0495684_0000537
278 Ga0496102_0000015
279 Ga0496102_0000062
280 Ga0496102_0000381
281 Ga0496102_0000846
282 Ga0496102_0004379
283 Ga0496102_0078565
284 Ga0496103_0000020
285 Ga0496103_0000073
286 Ga0496103_0001370
287 Ga0496104_0001986
288 Ga0496110_0031671
289 Ga0496116_0000139
290 Ga0496116_0001425
291 Ga0496117_0000047
292 Ga0496117_0001306
293 Ga0496117_0008692
294 Ga0496118_0000050
295 Ga0496118_0001247
296 Ga0496118_0001856
297 Ga0496118_0042024
298 Ga0496119_0000065
299 Ga0496119_0000649
300 Ga0496119_0031782
301 Ga0496120_0000815
302 Ga0496120_0024412
303 Ga0496121_0005504
304 Ga0496125_0108116
305 Ga0496126_0000049
306 Ga0496126_0016171
307 Ga0501034_0206377
308 Ga0501038_0169848
309 Ga0501047_0003212
310 Ga0501047_0168434
311 Ga0501035_0022814
312 Ga0501044_0004966
313 Ga0501044_0145868
314 Ga0501045_0159231
315 nmdc:mga03n38_890_c1
316 nmdc:mga0yw44_63252_c1
317 nmdc:mga06z11_1277_c1
318 nmdc:mga06z11_98_c1
319 nmdc:mga04h51_557_c1
320 nmdc:mga07m45_16265_c1
321 nmdc:mga07m45_23607_c1
322 Ga0500643_008470
323 Ga0500645_000006
324 Ga0500645_023027
325 2523387082
326 2552107955
327 2586063005
328 2738665351
329 2738702300
330 2738704312
331 2739144485
332 2739331205
333 2739331555
334 2753036189
335 2753324061
336 2774903130
337 2812352437
338 2870629109
339 2870786275
340 2899365730
341 2902804479
342 2906801065
343 2945956908
344 2954007885
345 2997604738
346 8002789719

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

25

490

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3b4w-assembly1.cif.gz_A-2 crystal structure of mycobacterium tuberculosis aldehyde dehydrogenase complexed with nad+ 0.9805 2 481
4pz2-assembly1.cif.gz_B structure of zm aldh2-6 (rf2f) in complex with nad 0.9764 5 474
3b4w-assembly1.cif.gz_A-2 crystal structure of mycobacterium tuberculosis aldehyde dehydrogenase complexed with nad+ 0.9764 2 481
4zwl-assembly1.cif.gz_C 2.60 angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betb) h448f/y450l double mutant from staphylococcus aureus in complex with nad+ and bme-free cys289 0.9747 4 481
4mpb-assembly1.cif.gz_A 1.7 angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betb) from staphylococcus aureus 0.9744 4 481
ID Description Score Start End Superfamily
af_I6X8S7_263_447_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9887 259 443 3.40.309.10
af_I6X8S7_24_476_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9827 20 472 3.40.605.10
af_I6X8S7_24_476_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9806 20 472 3.40.605.10
af_O59808_22_273_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9784 6 251 3.40.605.10
af_I6X8S7_263_447_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9782 259 443 3.40.309.10
ID Description Score Start End GO Terms
AF-A0A1A9MXS6-F1-model_v4 Aldehyde dehydrogenase 0.9888 5 475 GO:0016620
AF-A0A2A3G7A1-F1-model_v4 aldehyde dehydrogenase (NAD(+)) (EC 1.2.1.3) 0.9862 5 474 GO:0016620
AF-A0A1E4MVG4-F1-model_v4 deleted 0.9851 5 476
AF-A0A6G3X0S5-F1-model_v4 Aldehyde dehydrogenase family protein 0.9843 141 252 GO:0016491
AF-A0A5A9ZGU7-F1-model_v4 Aldehyde dehydrogenase family protein 0.9834 215 476 GO:0016620

Map