F261678

General Info

Members Datasets Scaffolds Average Seq Length
172 144 344 328

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2738543027|2739326808
Length 371
Sequence AVGGTGVRLTSLGLGAAPAGNLYRATTDEEAHATFEAAWDAGVRYFDTAPHYGLGLSERRLGAFLRTRPRDEAVVSTKVGRLLVPSPETAHRTDPDLFEVPAAARRVWDFSRDGVLRSLESSLERTGLDRVDVVYLHDPDGHWEQAAHEALPALVDLRDQGVIGAVGAGMNQSAMLTRFVRETDVDVVMCAGRFTLLEQTALADLLPAAAETGVAVVAAAVYNSGILAYDAPPPDATYDYAPAAAELLDRARRIAAVCADHGVTLPQAALAYVRTHPAVASAVVGLGTPEQARQAADRAAARVPAALWRALADVGLLAEAAVPAPAGPTSPSHQHRPEGPHRPENPHRPENPHHPENPHHPENPHHPERRY

Samples

Sample ID Description Type Environment
1 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
2 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
7 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
8 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
33 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
36 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
37 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
39 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
55 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
56 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
57 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
58 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
59 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
60 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
61 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
62 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
63 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
64 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
65 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
66 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
67 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
68 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
69 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
70 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
71 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
72 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
73 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
74 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
75 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
76 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
77 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
78 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
79 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
80 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
81 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
82 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
83 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
84 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
85 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
86 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
87 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
88 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
89 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
95 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
96 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
97 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
100 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
101 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
102 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
103 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
104 2643221616 Leifsonia sp. Root227 Isolate Unclassified
105 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
106 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
107 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
108 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
109 2808606372 Agromyces sp. 23-23 Isolate Unclassified
110 2808606394 Promicromonospora sp. C35 Isolate Unclassified
111 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
112 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
113 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
114 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
115 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
116 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
117 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
118 2858882152 Micromonospora noduli MED15 Isolate Nodule
119 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
120 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
121 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
122 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
123 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
124 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
125 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
126 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
127 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
128 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
129 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
130 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
131 2928153084 Leifsonia sp. 563 Isolate Unclassified
132 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
133 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
134 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
135 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
136 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
137 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
138 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
139 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
140 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
141 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
142 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
143 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
144 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.09
Metatranscriptomes 1.16
Isolates 26.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.05
Nodule 2.91
Rhizoplane 4.65
Rhizosphere 56.4
Stem 0
Stem Tuber 0.58
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10001478 3300002067 Bacteria 8308
2 JGI24735J21928_10004182 3300002067 Bacteria 4874
3 JGI24735J21928_10037711 3300002067 Bacteria 1416
4 JGI25164J39214_1000826 3300002772 Bacteria 10822
5 JGI25406J46586_10000804 3300003203 Bacteria 14823
6 JGI25165J46597_1000005 3300003214 Bacteria 623702
7 Ga0006562J51391_1095666 3300003578 Bacteria 4911
8 Ga0006562J51391_1095667 3300003578 Bacteria 4280
9 Ga0055527_1000004 3300003760 Bacteria 570634
10 Ga0055542_1000055 3300003762 Bacteria 171477
11 Ga0055529_1000066 3300003763 Bacteria 170902
12 Ga0070658_10053530 3300005327 Bacteria 3276
13 Ga0070683_100002139 3300005329 Bacteria 15616
14 Ga0070670_100255825 3300005331 Bacteria 1526
15 Ga0068855_100068335 3300005563 Bacteria 4137
16 Ga0068857_100001777 3300005577 Bacteria 17338
17 Ga0068857_100026513 3300005577 Bacteria 5108
18 Ga0068857_100029096 3300005577 Bacteria 4875
19 Ga0068856_100056402 3300005614 Bacteria 3876
20 Ga0068856_100199060 3300005614 Bacteria 2018
21 Ga0068852_100000693 3300005616 Bacteria 22056
22 Ga0068852_100012608 3300005616 Bacteria 6425
23 Ga0068864_100009245 3300005618 Bacteria 8127
24 Ga0068851_10000033 3300005834 Bacteria 108511
25 Ga0068863_100148221 3300005841 Bacteria 2245
26 Ga0068863_100198798 3300005841 Bacteria 1928
27 Ga0081539_10001051 3300005985 Bacteria 50562
28 Ga0075365_10088327 3300006038 Bacteria 2109
29 Ga0105244_10066400 3300009036 Bacteria 1806
30 Ga0105240_10004370 3300009093 Bacteria 21580
31 Ga0105245_10014955 3300009098 Bacteria 6761
32 Ga0105241_10000410 3300009174 Bacteria 32447
33 Ga0105248_10034133 3300009177 Bacteria 5687
34 Ga0105248_10091852 3300009177 Bacteria 3419
35 Ga0105237_10000673 3300009545 Bacteria 47236
36 Ga0105237_10288715 3300009545 Bacteria 1643
37 Ga0105238_10000376 3300009551 Bacteria 47943
38 Ga0105238_10002038 3300009551 Bacteria 20395
39 Ga0105239_10148930 3300010375 Bacteria 2612
40 Ga0157369_10091855 3300013105 Bacteria 3240
41 Ga0157375_10489229 3300013308 Bacteria 1395
42 Ga0163163_10008903 3300014325 Bacteria 8939
43 Ga0163163_10018110 3300014325 Bacteria 6583
44 Ga0157379_10027434 3300014968 Bacteria 5071
45 Ga0209672_100011 3300025228 Bacteria 856297
46 Ga0209147_100496 3300025229 Bacteria 23038
47 Ga0207427_100024 3300025231 Bacteria 438403
48 Ga0209437_100583 3300025233 Bacteria 23338
49 Ga0209148_1000132 3300025254 Bacteria 171529
50 Ga0209148_1000601 3300025254 Bacteria 32421
51 Ga0209233_1000001 3300025261 Bacteria 2992747
52 Ga0209455_1000122 3300025272 Bacteria 170954
53 Ga0207656_10000001 3300025321 Bacteria 1323684
54 Ga0207647_10127914 3300025904 Bacteria 1494
55 Ga0207699_10080223 3300025906 Bacteria 2021
56 Ga0207654_10000001 3300025911 Bacteria 1816198
57 Ga0207695_10002392 3300025913 Bacteria 27815
58 Ga0207671_10000001 3300025914 Bacteria 1318881
59 Ga0207671_10192763 3300025914 Bacteria 1589
60 Ga0207694_10000019 3300025924 Bacteria 312382
61 Ga0207711_10007872 3300025941 Bacteria 8914
62 Ga0207711_10184720 3300025941 Bacteria 1897
63 Ga0207667_10094121 3300025949 Bacteria 3094
64 Ga0207702_10133815 3300026078 Bacteria 2234
65 Ga0207641_10189816 3300026088 Bacteria 1888
66 Ga0207676_10289557 3300026095 Bacteria 1490
67 Ga0207674_10001465 3300026116 Bacteria 30502
68 Ga0207674_10016188 3300026116 Bacteria 8167
69 Ga0207698_10003284 3300026142 Bacteria 9719
70 Ga0207698_10006735 3300026142 Bacteria 7179
71 Ga0307515_10090100 3300028794 Bacteria 3851
72 Ga0307513_10010474 3300031456 Bacteria 11618
73 Ga0307513_10040141 3300031456 Bacteria 5177
74 Ga0307510_10158677 3300033180 Bacteria 1864
75 Ga0395899_0019940 3300037312 Bacteria 5088
76 Ga0395900_0001959 3300037418 Bacteria 23249
77 Ga0395898_0000158 3300037466 Bacteria 172981
78 Ga0451789_0596990 3300041443 Bacteria 2397
79 Ga0451793_0198380 3300041452 Bacteria 1805
80 Ga0451837_1260544 3300041494 Bacteria 3662
81 Ga0451853_1125494 3300041512 Bacteria 2115
82 Ga0439442_003012 3300042002 Bacteria 3327
83 Ga0450920_000834 3300042122 Bacteria 4993
84 Ga0450907_002069 3300042146 Bacteria 3985
85 Ga0439434_0004866 3300042435 Bacteria 3927
86 Ga0450918_007233 3300042531 Bacteria 1970
87 Ga0466972_0092751 3300044658 Bacteria 1431
88 Ga0466966_0234172 3300044684 Bacteria 1107
89 Ga0495627_001461 3300046453 Bacteria 13840
90 Ga0495603_0000443 3300046455 Bacteria 22692
91 Ga0495603_0024985 3300046455 Bacteria 3613
92 Ga0495629_0001445 3300046459 Bacteria 18738
93 Ga0495629_0002293 3300046459 Bacteria 14755
94 Ga0495650_0000727 3300046471 Bacteria 41607
95 Ga0495594_0005378 3300046499 Bacteria 6579
96 Ga0495622_0015327 3300046557 Bacteria 3564
97 Ga0495588_0011484 3300046674 Bacteria 4159
98 Ga0495613_0010789 3300046689 Bacteria 6778
99 Ga0495581_0130571 3300047315 Bacteria 1464
100 Ga0495676_0009632 3300047321 Bacteria 8792
101 Ga0495614_0000247 3300048089 Bacteria 21181
102 Ga0496105_0014965 3300048908 Bacteria 6175
103 Ga0496105_0104468 3300048908 Bacteria 2339
104 Ga0496107_0378617 3300048910 Bacteria 1053
105 Ga0496108_0062172 3300048911 Bacteria 3144
106 Ga0496110_0154513 3300048913 Bacteria 2078
107 Ga0496111_0066416 3300048914 Bacteria 2619
108 Ga0496117_0007904 3300048920 Bacteria 10224
109 Ga0496117_0094831 3300048920 Bacteria 1909
110 Ga0496119_0001055 3300048922 Bacteria 35142
111 Ga0496120_0000600 3300048923 Bacteria 54546
112 Ga0496120_0014635 3300048923 Bacteria 5219
113 Ga0501032_0075132 3300049569 Bacteria 2251
114 Ga0501033_0004539 3300049570 Bacteria 11113
115 Ga0501043_0008756 3300049579 Bacteria 7967
116 Ga0501047_0079889 3300049581 Bacteria 3144
117 Ga0501070_0148119 3300049586 Bacteria 1937
118 Ga0501073_0000052 3300049589 Bacteria 73681
119 Ga0501074_0020834 3300049590 Bacteria 4763
120 Ga0501080_0075379 3300049742 Bacteria 3138
121 Ga0501044_0178447 3300049823 Bacteria 2092
122 Ga0500635_0000088 3300053080 Bacteria 58889
123 Ga0500651_0000221 3300053093 Bacteria 35785
124 Ga0500568_0000997 3300053139 Bacteria 19374
125 Ga0500568_0055560 3300053139 Bacteria 1545
126 Ga0500620_000022 3300053155 Bacteria 31020
127 2739326808 2738543027 Bacteria 6409078
128 2644097323 2643221616 Bacteria 4066575
129 2738697294 2738541272 Bacteria 6848551
130 2739605986 2739367654 Bacteria 6049412
131 2739607648 2739367654 Bacteria 6049412
132 2760303901 2758568522 Bacteria 5953541
133 2760304323 2758568522 Bacteria 5953541
134 2760624336 2758568621 Bacteria 5967089
135 2808900187 2808606372 Bacteria 4649509
136 2809026530 2808606394 Bacteria 6248540
137 2809029218 2808606394 Bacteria 6248540
138 2812354186 2811994879 Bacteria 9313447
139 2832007745 2832004796 Bacteria 6538017
140 2852635862 2852635781 Bacteria 8251373
141 2852644659 2852643534 Bacteria 3013378
142 2855681768 2855676851 Bacteria 7063653
143 2857293675 2857288857 Bacteria 7189066
144 2858851154 2858848962 Bacteria 6963058
145 2858887735 2858882152 Bacteria 7230291
146 2858893566 2858888857 Bacteria 7060307
147 2858896900 2858895516 Bacteria 7378898
148 2866071364 2866065130 Bacteria 6518152
149 2867507433 2867507094 Bacteria 6506033
150 2869052630 2869048445 Bacteria 6875584
151 2869067754 2869061728 Bacteria 7112407
152 2869069060 2869068681 Bacteria 7205615
153 2880491758 2880489317 Bacteria 7096270
154 2880500560 2880495981 Bacteria 7340502
155 2884763471 2884763398 Bacteria 4091164
156 2919056876 2919055335 Bacteria 3875751
157 2919525916 2919523602 Bacteria 3788128
158 2928154574 2928153084 Bacteria 4020257
159 2929229055 2929226422 Bacteria 7248583
160 2946071512 2946064051 Bacteria 8957905
161 2946083240 2946080515 Bacteria 4310960
162 2947225266 2947224130 Bacteria 9938529
163 2964327047 2964326757 Bacteria 3290868
164 8001789187 8001781756 Bacteria 9586736
165 8003834957 8003830390 Bacteria 6541657
166 8003871704 8003870546 Bacteria 7396674
167 8023626711 8023623736 Bacteria 8593882
168 8054709350 8054704163 Bacteria 7247792
169 8054727809 8054727385 Bacteria 7558670
170 8054730502 8054727385 Bacteria 7558670
171 8054736732 8054734606 Bacteria 6947278
172 8056583828 8056579771 Bacteria 5840325
173 JGI24735J21928_10001478
174 JGI24735J21928_10004182
175 JGI24735J21928_10037711
176 JGI25164J39214_1000826
177 JGI25406J46586_10000804
178 JGI25165J46597_1000005
179 Ga0006562J51391_1095666
180 Ga0006562J51391_1095667
181 Ga0055527_1000004
182 Ga0055542_1000055
183 Ga0055529_1000066
184 Ga0070658_10053530
185 Ga0070683_100002139
186 Ga0070670_100255825
187 Ga0068855_100068335
188 Ga0068857_100001777
189 Ga0068857_100026513
190 Ga0068857_100029096
191 Ga0068856_100056402
192 Ga0068856_100199060
193 Ga0068852_100000693
194 Ga0068852_100012608
195 Ga0068864_100009245
196 Ga0068851_10000033
197 Ga0068863_100148221
198 Ga0068863_100198798
199 Ga0081539_10001051
200 Ga0075365_10088327
201 Ga0105244_10066400
202 Ga0105240_10004370
203 Ga0105245_10014955
204 Ga0105241_10000410
205 Ga0105248_10034133
206 Ga0105248_10091852
207 Ga0105237_10000673
208 Ga0105237_10288715
209 Ga0105238_10000376
210 Ga0105238_10002038
211 Ga0105239_10148930
212 Ga0157369_10091855
213 Ga0157375_10489229
214 Ga0163163_10008903
215 Ga0163163_10018110
216 Ga0157379_10027434
217 Ga0209672_100011
218 Ga0209147_100496
219 Ga0207427_100024
220 Ga0209437_100583
221 Ga0209148_1000132
222 Ga0209148_1000601
223 Ga0209233_1000001
224 Ga0209455_1000122
225 Ga0207656_10000001
226 Ga0207647_10127914
227 Ga0207699_10080223
228 Ga0207654_10000001
229 Ga0207695_10002392
230 Ga0207671_10000001
231 Ga0207671_10192763
232 Ga0207694_10000019
233 Ga0207711_10007872
234 Ga0207711_10184720
235 Ga0207667_10094121
236 Ga0207702_10133815
237 Ga0207641_10189816
238 Ga0207676_10289557
239 Ga0207674_10001465
240 Ga0207674_10016188
241 Ga0207698_10003284
242 Ga0207698_10006735
243 Ga0307515_10090100
244 Ga0307513_10010474
245 Ga0307513_10040141
246 Ga0307510_10158677
247 Ga0395899_0019940
248 Ga0395900_0001959
249 Ga0395898_0000158
250 Ga0451789_0596990
251 Ga0451793_0198380
252 Ga0451837_1260544
253 Ga0451853_1125494
254 Ga0439442_003012
255 Ga0450920_000834
256 Ga0450907_002069
257 Ga0439434_0004866
258 Ga0450918_007233
259 Ga0466972_0092751
260 Ga0466966_0234172
261 Ga0495627_001461
262 Ga0495603_0000443
263 Ga0495603_0024985
264 Ga0495629_0001445
265 Ga0495629_0002293
266 Ga0495650_0000727
267 Ga0495594_0005378
268 Ga0495622_0015327
269 Ga0495588_0011484
270 Ga0495613_0010789
271 Ga0495581_0130571
272 Ga0495676_0009632
273 Ga0495614_0000247
274 Ga0496105_0014965
275 Ga0496105_0104468
276 Ga0496107_0378617
277 Ga0496108_0062172
278 Ga0496110_0154513
279 Ga0496111_0066416
280 Ga0496117_0007904
281 Ga0496117_0094831
282 Ga0496119_0001055
283 Ga0496120_0000600
284 Ga0496120_0014635
285 Ga0501032_0075132
286 Ga0501033_0004539
287 Ga0501043_0008756
288 Ga0501047_0079889
289 Ga0501070_0148119
290 Ga0501073_0000052
291 Ga0501074_0020834
292 Ga0501080_0075379
293 Ga0501044_0178447
294 Ga0500635_0000088
295 Ga0500651_0000221
296 Ga0500568_0000997
297 Ga0500568_0055560
298 Ga0500620_000022
299 2739326808
300 2644097323
301 2738697294
302 2739605986
303 2739607648
304 2760303901
305 2760304323
306 2760624336
307 2808900187
308 2809026530
309 2809029218
310 2812354186
311 2832007745
312 2852635862
313 2852644659
314 2855681768
315 2857293675
316 2858851154
317 2858887735
318 2858893566
319 2858896900
320 2866071364
321 2867507433
322 2869052630
323 2869067754
324 2869069060
325 2880491758
326 2880500560
327 2884763471
328 2919056876
329 2919525916
330 2928154574
331 2929229055
332 2946071512
333 2946083240
334 2947225266
335 2964327047
336 8001789187
337 8003834957
338 8003871704
339 8023626711
340 8054709350
341 8054727809
342 8054730502
343 8054736732
344 8056583828

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00248

Aldo_ket_red

Aldo/keto reductase family

11

314

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7lh6-assembly1.cif.gz_A the structure of bacteroides plebeius l-galactose dehydrogenase 0.8768 3 320
4exb-assembly2.cif.gz_C putative aldo-keto reductase from pseudomona aeruginosa 0.8708 4 306
1ynq-assembly1.cif.gz_A aldo-keto reductase akr11c1 from bacillus halodurans (holo form) 0.8702 1 325
4exb-assembly1.cif.gz_A putative aldo-keto reductase from pseudomona aeruginosa 0.8653 4 306
7lh6-assembly1.cif.gz_B the structure of bacteroides plebeius l-galactose dehydrogenase 0.8626 3 320
ID Description Score Start End Superfamily
1ynpB01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8746 1 325 3.20.20.100
1ynpB01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8718 1 325 3.20.20.100
af_K7L2J1_1_132_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8593 5 157 3.20.20.100
3v0uA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8456 1 325 3.20.20.100
af_Q2G0G6_3_309_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8438 3 325 3.20.20.100
ID Description Score Start End GO Terms
AF-A0A7Z7BVE2-F1-model_v4 D-threo-aldose 1-dehydrogenase 1.001 1 325 GO:0005829
GO:0016491
AF-A0A1H5JER7-F1-model_v4 D-threo-aldose 1-dehydrogenase 0.9941 5 324 GO:0005829
GO:0016491
AF-A0A2P8DFD7-F1-model_v4 D-threo-aldose 1-dehydrogenase 0.9893 2 324 GO:0005829
GO:0016491
AF-A0A4Q7KIW8-F1-model_v4 D-threo-aldose 1-dehydrogenase 0.9883 3 325 GO:0005829
GO:0016491
AF-A0A3R8TBX6-F1-model_v4 Aldo/keto reductase 0.9844 3 280 GO:0005829
GO:0016491

Map