F261163

General Info

Members Datasets Scaffolds Average Seq Length
172 110 344 397

Family's Representative Sequence

Representative Sequence 3300042001|Ga0439441_001908|Ga0439441_001908_1405_2709
Length 434
Sequence MGKMSHSAKINRITRKQKFGMPNKFILDYPYLCRVMTNKIKALAIICLLILAGIGCQKLLPKVPADDSILDGPVERLTHEQNAIFLRGDIAFNDDIFTAQTGLGPLFVATSCGSCHAGDGKGHPFTTLTRFGQVDTFGNQFMNQGGPQLQNRAIPGFTPEQIPAGTAFSKFTPPANTGLGFLEAVGDATLLALSDPNDANGDGISGRPNWITVPQYCIYRPGTIERNGKYIGRFGKKAAVYDLLQQTVNAYNQDMGVNSTYEHYSTHNALEVDPEITNQTALDVVFYLQTLKAPVQRNKNDADVIAGKQVFLNLSCGKCHVPELQTSFSPIAPLSNKTFFPYTDLLLHDMGPGLNDGYTEGTALPAEWRTPALWGLGLSKNSQGGQYFLLHDGRATTIEQAILMHGGEAEQSKNRFQQLTATDKANLIKFLESL

Samples

Sample ID Description Type Environment
1 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
58 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
60 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
61 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
87 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
88 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
89 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
90 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
91 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
92 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
93 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
94 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
95 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
96 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
97 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
98 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
99 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
100 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
101 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
102 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
103 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
104 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
105 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
106 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
107 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
108 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
109 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
110 2738541278 Niastella sp. CF465 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.42
Metatranscriptomes 0
Isolates 0.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.3
Nodule 0
Rhizoplane 0.58
Rhizosphere 84.3
Stem 0
Stem Tuber 0
Unclassified 20.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439441_001908 3300042001 Bacteria 2851
2 rootH2_10323652 3300003320 Unclassified 1882
3 rootL2_10149857 3300003322 Bacteria 5152
4 rootL2_10236989 3300003322 Bacteria 1812
5 rootH1_10088947 3300003323 Bacteria 18169
6 rootH1_10100208 3300003323 Bacteria 2445
7 Ga0055531_10000491 3300003794 Bacteria 36227
8 Ga0065714_10003161 3300005288 Bacteria 18452
9 Ga0065715_10166384 3300005293 Viruses 1576
10 Ga0070676_10011012 3300005328 Bacteria 4914
11 Ga0070676_10022461 3300005328 Bacteria 3537
12 Ga0070683_100002300 3300005329 Bacteria 15147
13 Ga0070690_100030349 3300005330 Bacteria 3359
14 Ga0070690_100060916 3300005330 Bacteria 2430
15 Ga0070670_100012826 3300005331 Bacteria 7172
16 Ga0070670_100018275 3300005331 Bacteria 6015
17 Ga0068869_100011701 3300005334 Bacteria 5766
18 Ga0068869_100033209 3300005334 Bacteria 3642
19 Ga0068869_100138605 3300005334 Unclassified 1876
20 Ga0068868_100002622 3300005338 Bacteria 12473
21 Ga0070661_100009018 3300005344 Bacteria 6899
22 Ga0070668_100045166 3300005347 Bacteria 3380
23 Ga0070669_100074709 3300005353 Bacteria 2513
24 Ga0070675_100197491 3300005354 Bacteria 1745
25 Ga0070673_100151253 3300005364 Unclassified 1966
26 Ga0070667_100017360 3300005367 Bacteria 5964
27 Ga0070694_100125112 3300005444 Bacteria 1850
28 Ga0070678_100043438 3300005456 Bacteria 3202
29 Ga0070678_100300611 3300005456 Bacteria 1364
30 Ga0070662_100052642 3300005457 Bacteria 2944
31 Ga0070662_100096108 3300005457 Unclassified 2234
32 Ga0068867_100033774 3300005459 Bacteria 3707
33 Ga0070685_10011570 3300005466 Bacteria 4621
34 Ga0070698_100009578 3300005471 Bacteria 10366
35 Ga0070698_100023658 3300005471 Bacteria 6418
36 Ga0070684_100012550 3300005535 Bacteria 6796
37 Ga0068853_100083815 3300005539 Bacteria 2793
38 Ga0070672_100080739 3300005543 Bacteria 2606
39 Ga0070665_100418057 3300005548 Unclassified 1349
40 Ga0070664_100135645 3300005564 Unclassified 2164
41 Ga0070664_100206210 3300005564 Bacteria 1756
42 Ga0070664_100290029 3300005564 Bacteria 1477
43 Ga0068857_100056208 3300005577 Unclassified 3493
44 Ga0068857_100058387 3300005577 Bacteria 3426
45 Ga0068857_100106597 3300005577 Unclassified 2517
46 Ga0068857_100134733 3300005577 Unclassified 2230
47 Ga0068854_100061562 3300005578 Bacteria 2719
48 Ga0068864_100026471 3300005618 Unclassified 4891
49 Ga0068864_100042488 3300005618 Bacteria 3890
50 Ga0068866_10010067 3300005718 Unclassified 4043
51 Ga0068861_100023655 3300005719 Bacteria 4434
52 Ga0068870_10150521 3300005840 Unclassified 1370
53 Ga0068860_100009822 3300005843 Bacteria 9494
54 Ga0068862_100030496 3300005844 Unclassified 4545
55 Ga0097621_100055402 3300006237 Unclassified 3238
56 Ga0068871_100013701 3300006358 Bacteria 6026
57 Ga0075429_100062007 3300006880 Bacteria 3258
58 Ga0105240_10389773 3300009093 Bacteria 1571
59 Ga0111539_10005961 3300009094 Bacteria 15739
60 Ga0111539_10007048 3300009094 Bacteria 14423
61 Ga0114129_10030315 3300009147 Bacteria 7655
62 Ga0114129_10039962 3300009147 Bacteria 6617
63 Ga0105242_10098046 3300009176 Bacteria 2479
64 Ga0105242_10246352 3300009176 Unclassified 1608
65 Ga0105237_10050984 3300009545 Unclassified 4158
66 Ga0105249_10127793 3300009553 Bacteria 2422
67 Ga0157370_10042489 3300013104 Unclassified 4380
68 Ga0157374_10002812 3300013296 Bacteria 14601
69 Ga0157374_10028754 3300013296 Bacteria 5025
70 Ga0157374_10041062 3300013296 Bacteria 4261
71 Ga0157374_10270375 3300013296 Bacteria 1676
72 Ga0157378_10009441 3300013297 Bacteria 8502
73 Ga0157378_10011335 3300013297 Bacteria 7803
74 Ga0157378_10093023 3300013297 Bacteria 2744
75 Ga0157378_10215384 3300013297 Bacteria 1823
76 Ga0163162_10012388 3300013306 Bacteria 8327
77 Ga0163162_10146031 3300013306 Unclassified 2482
78 Ga0163162_10275192 3300013306 Bacteria 1815
79 Ga0163162_10426976 3300013306 Bacteria 1457
80 Ga0157375_10031377 3300013308 Bacteria 5023
81 Ga0157375_10182538 3300013308 Bacteria 2250
82 Ga0157375_10320076 3300013308 Unclassified 1716
83 Ga0163163_10001011 3300014325 Bacteria 23801
84 Ga0157380_10006770 3300014326 Bacteria 8100
85 Ga0157380_10009921 3300014326 Bacteria 6835
86 Ga0157380_10039420 3300014326 Bacteria 3673
87 Ga0157380_10056911 3300014326 Unclassified 3112
88 Ga0157380_10068943 3300014326 Bacteria 2852
89 Ga0182008_10000017 3300014497 Bacteria 235130
90 Ga0157377_10001900 3300014745 Bacteria 9150
91 Ga0157377_10009612 3300014745 Bacteria 4754
92 Ga0157377_10011221 3300014745 Unclassified 4465
93 Ga0163161_10012926 3300017792 Bacteria 5800
94 Ga0209564_1008894 3300025295 Unclassified 4876
95 Ga0209758_1001717 3300025297 Bacteria 24515
96 Ga0207426_1033897 3300025302 Bacteria 1642
97 Ga0209257_1000005 3300025304 Bacteria 1592528
98 Ga0207688_10022355 3300025901 Bacteria 3461
99 Ga0207645_10010846 3300025907 Bacteria 6243
100 Ga0207645_10041985 3300025907 Bacteria 2927
101 Ga0207645_10150466 3300025907 Bacteria 1519
102 Ga0207643_10003004 3300025908 Bacteria 9097
103 Ga0207662_10040520 3300025918 Bacteria 2739
104 Ga0207662_10089187 3300025918 Bacteria 1894
105 Ga0207649_10016015 3300025920 Unclassified 4221
106 Ga0207681_10080764 3300025923 Bacteria 2294
107 Ga0207659_10014058 3300025926 Bacteria 5153
108 Ga0207706_10045955 3300025933 Bacteria 3867
109 Ga0207706_10214314 3300025933 Bacteria 1687
110 Ga0207670_10032005 3300025936 Bacteria 3377
111 Ga0207704_10036699 3300025938 Bacteria 2822
112 Ga0207704_10045477 3300025938 Unclassified 2608
113 Ga0207691_10009899 3300025940 Bacteria 9151
114 Ga0207691_10113790 3300025940 Bacteria 2404
115 Ga0207689_10003771 3300025942 Bacteria 13808
116 Ga0207689_10027186 3300025942 Unclassified 4790
117 Ga0207689_10028381 3300025942 Unclassified 4682
118 Ga0207689_10043488 3300025942 Bacteria 3713
119 Ga0207689_10101166 3300025942 Bacteria 2367
120 Ga0207661_10021134 3300025944 Unclassified 4876
121 Ga0207679_10005096 3300025945 Bacteria 8215
122 Ga0207679_10293435 3300025945 Bacteria 1399
123 Ga0207668_10046262 3300025972 Bacteria 2972
124 Ga0207703_10138939 3300026035 Bacteria 2107
125 Ga0207678_10044936 3300026067 Bacteria 3820
126 Ga0207641_10339632 3300026088 Bacteria 1429
127 Ga0207648_10021494 3300026089 Bacteria 5800
128 Ga0207648_10084279 3300026089 Unclassified 2772
129 Ga0207674_10033247 3300026116 Bacteria 5400
130 Ga0207674_10039831 3300026116 Bacteria 4870
131 Ga0207674_10085699 3300026116 Bacteria 3145
132 Ga0207674_10092216 3300026116 Bacteria 3019
133 Ga0207675_100001112 3300026118 Bacteria 26617
134 Ga0207675_100037757 3300026118 Bacteria 4506
135 Ga0207675_100080302 3300026118 Bacteria 3058
136 Ga0207683_10005488 3300026121 Bacteria 10863
137 Ga0207683_10065764 3300026121 Bacteria 3197
138 Ga0207428_10064381 3300027907 Unclassified 2894
139 Ga0207428_10102963 3300027907 Bacteria 2204
140 Ga0268265_10062488 3300028380 Bacteria 2862
141 Ga0268265_10146748 3300028380 Unclassified 1983
142 Ga0307515_10000300 3300028794 Bacteria 122040
143 Ga0265327_10005182 3300031251 Bacteria 11028
144 Ga0307509_10022322 3300031507 Bacteria 7138
145 Ga0307509_10128104 3300031507 Unclassified 2500
146 Ga0307408_100001666 3300031548 Bacteria 16370
147 Ga0307508_10038379 3300031616 Bacteria 4305
148 Ga0495616_0001519 3300046513 Bacteria 15997
149 Ga0495648_0063890 3300046524 Bacteria 2171
150 Ga0495668_0001836 3300046616 Bacteria 19167
151 Ga0495668_0009422 3300046616 Bacteria 5999
152 Ga0495625_0107976 3300046660 Bacteria 1904
153 Ga0495686_0014892 3300047472 Bacteria 5336
154 Ga0496114_0000244 3300048917 Bacteria 39586
155 nmdc:mga05p37_27238_c2 3300050507 Bacteria 4990
156 nmdc:mga09592_50712_c1 3300050508 Bacteria 3500
157 nmdc:mga08y16_123121_c1 3300050511 Unclassified 2698
158 nmdc:mga08y16_28063_c1 3300050511 Bacteria 5934
159 nmdc:mga08y16_284997_c1 3300050511 Unclassified 1703
160 nmdc:mga08y16_98245_c1 3300050511 Unclassified 3049
161 Ga0500578_0015748 3300053086 Bacteria 4854
162 Ga0500646_0011453 3300053090 Unclassified 2282
163 Ga0500583_0000004 3300053092 Bacteria 174723
164 Ga0500583_0001632 3300053092 Bacteria 6525
165 Ga0500650_0014464 3300053098 Bacteria 3339
166 Ga0500562_000008 3300053108 Bacteria 188332
167 Ga0500652_014797 3300053131 Bacteria 2799
168 Ga0500568_0003883 3300053139 Bacteria 8146
169 Ga0500616_0001761 3300053153 Bacteria 19816
170 Ga0500622_0086574 3300053156 Bacteria 1561
171 Ga0500611_000031 3300053727 Bacteria 85821
172 2738727482 2738541278 Bacteria 9755573
173 Ga0439441_001908
174 rootH2_10323652
175 rootL2_10149857
176 rootL2_10236989
177 rootH1_10088947
178 rootH1_10100208
179 Ga0055531_10000491
180 Ga0065714_10003161
181 Ga0065715_10166384
182 Ga0070676_10011012
183 Ga0070676_10022461
184 Ga0070683_100002300
185 Ga0070690_100030349
186 Ga0070690_100060916
187 Ga0070670_100012826
188 Ga0070670_100018275
189 Ga0068869_100011701
190 Ga0068869_100033209
191 Ga0068869_100138605
192 Ga0068868_100002622
193 Ga0070661_100009018
194 Ga0070668_100045166
195 Ga0070669_100074709
196 Ga0070675_100197491
197 Ga0070673_100151253
198 Ga0070667_100017360
199 Ga0070694_100125112
200 Ga0070678_100043438
201 Ga0070678_100300611
202 Ga0070662_100052642
203 Ga0070662_100096108
204 Ga0068867_100033774
205 Ga0070685_10011570
206 Ga0070698_100009578
207 Ga0070698_100023658
208 Ga0070684_100012550
209 Ga0068853_100083815
210 Ga0070672_100080739
211 Ga0070665_100418057
212 Ga0070664_100135645
213 Ga0070664_100206210
214 Ga0070664_100290029
215 Ga0068857_100056208
216 Ga0068857_100058387
217 Ga0068857_100106597
218 Ga0068857_100134733
219 Ga0068854_100061562
220 Ga0068864_100026471
221 Ga0068864_100042488
222 Ga0068866_10010067
223 Ga0068861_100023655
224 Ga0068870_10150521
225 Ga0068860_100009822
226 Ga0068862_100030496
227 Ga0097621_100055402
228 Ga0068871_100013701
229 Ga0075429_100062007
230 Ga0105240_10389773
231 Ga0111539_10005961
232 Ga0111539_10007048
233 Ga0114129_10030315
234 Ga0114129_10039962
235 Ga0105242_10098046
236 Ga0105242_10246352
237 Ga0105237_10050984
238 Ga0105249_10127793
239 Ga0157370_10042489
240 Ga0157374_10002812
241 Ga0157374_10028754
242 Ga0157374_10041062
243 Ga0157374_10270375
244 Ga0157378_10009441
245 Ga0157378_10011335
246 Ga0157378_10093023
247 Ga0157378_10215384
248 Ga0163162_10012388
249 Ga0163162_10146031
250 Ga0163162_10275192
251 Ga0163162_10426976
252 Ga0157375_10031377
253 Ga0157375_10182538
254 Ga0157375_10320076
255 Ga0163163_10001011
256 Ga0157380_10006770
257 Ga0157380_10009921
258 Ga0157380_10039420
259 Ga0157380_10056911
260 Ga0157380_10068943
261 Ga0182008_10000017
262 Ga0157377_10001900
263 Ga0157377_10009612
264 Ga0157377_10011221
265 Ga0163161_10012926
266 Ga0209564_1008894
267 Ga0209758_1001717
268 Ga0207426_1033897
269 Ga0209257_1000005
270 Ga0207688_10022355
271 Ga0207645_10010846
272 Ga0207645_10041985
273 Ga0207645_10150466
274 Ga0207643_10003004
275 Ga0207662_10040520
276 Ga0207662_10089187
277 Ga0207649_10016015
278 Ga0207681_10080764
279 Ga0207659_10014058
280 Ga0207706_10045955
281 Ga0207706_10214314
282 Ga0207670_10032005
283 Ga0207704_10036699
284 Ga0207704_10045477
285 Ga0207691_10009899
286 Ga0207691_10113790
287 Ga0207689_10003771
288 Ga0207689_10027186
289 Ga0207689_10028381
290 Ga0207689_10043488
291 Ga0207689_10101166
292 Ga0207661_10021134
293 Ga0207679_10005096
294 Ga0207679_10293435
295 Ga0207668_10046262
296 Ga0207703_10138939
297 Ga0207678_10044936
298 Ga0207641_10339632
299 Ga0207648_10021494
300 Ga0207648_10084279
301 Ga0207674_10033247
302 Ga0207674_10039831
303 Ga0207674_10085699
304 Ga0207674_10092216
305 Ga0207675_100001112
306 Ga0207675_100037757
307 Ga0207675_100080302
308 Ga0207683_10005488
309 Ga0207683_10065764
310 Ga0207428_10064381
311 Ga0207428_10102963
312 Ga0268265_10062488
313 Ga0268265_10146748
314 Ga0307515_10000300
315 Ga0265327_10005182
316 Ga0307509_10022322
317 Ga0307509_10128104
318 Ga0307408_100001666
319 Ga0307508_10038379
320 Ga0495616_0001519
321 Ga0495648_0063890
322 Ga0495668_0001836
323 Ga0495668_0009422
324 Ga0495625_0107976
325 Ga0495686_0014892
326 Ga0496114_0000244
327 nmdc:mga05p37_27238_c2
328 nmdc:mga09592_50712_c1
329 nmdc:mga08y16_123121_c1
330 nmdc:mga08y16_28063_c1
331 nmdc:mga08y16_284997_c1
332 nmdc:mga08y16_98245_c1
333 Ga0500578_0015748
334 Ga0500646_0011453
335 Ga0500583_0000004
336 Ga0500583_0001632
337 Ga0500650_0014464
338 Ga0500562_000008
339 Ga0500652_014797
340 Ga0500568_0003883
341 Ga0500616_0001761
342 Ga0500622_0086574
343 Ga0500611_000031
344 2738727482

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06537

DHOR

Di-haem oxidoreductase, putative peroxidase

173

434

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fu3-assembly1.cif.gz_B structure of the mixed-valence, active form, of cytochrome c peroxidase from obligate human pathogenic bacterium neisseria gonorrhoeae 0.5321 244 386
1eb7-assembly1.cif.gz_A-2 crystal structure of the di-haem cytochrome c peroxidase from pseudomonas aeruginosa 0.4931 244 387
5c2w-assembly1.cif.gz_F kuenenia stuttgartiensis hydrazine synthase pressurized with 20 bar xenon 0.488 228 387
3hq9-assembly1.cif.gz_A ccpa from g. sulfurreducens, s134p variant 0.4655 244 387
2vhd-assembly1.cif.gz_B crystal structure of the di-haem cytochrome c peroxidase from pseudomonas aeruginosa - mixed valence form 0.4619 244 387
ID Description Score Start End Superfamily
1zzhC01 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.4894 266 387 1.10.760.10
4fa4B02 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.4563 266 386 1.10.760.10
6fu3B01 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.4562 263 386 1.10.760.10
1ls9A00 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.4262 266 385 1.10.760.10
1zzhC01 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.3893 266 387 1.10.760.10
ID Description Score Start End GO Terms
AF-A0A656JYG3-F1-model_v4 Lipoprotein 0.9047 197 339 GO:0004130
GO:0009055
GO:0020037
AF-A0A4Q3W9H9-F1-model_v4 Thiol oxidoreductase 0.8779 173 387 GO:0004130
GO:0009055
GO:0020037
AF-A0A535BI50-F1-model_v4 Cytochrome c domain-containing protein 0.8674 134 337 GO:0004130
GO:0009055
GO:0020037
GO:0046872
AF-F3GIX0-F1-model_v4 Lipoprotein 0.8584 137 333 GO:0004130
GO:0009055
GO:0020037
AF-A0A4Q6EM58-F1-model_v4 deleted 0.8548 136 350

Map