F261080

General Info

Members Datasets Scaffolds Average Seq Length
172 100 170 347

Family's Representative Sequence

Representative Sequence 3300036401|Ga0373937_0094406|Ga0373937_0094406_910_2094
Length 394
Sequence VLLAINSNRAVANEFETAPADDKLRNFARVSRFQASQFLLSRARHTVKSLVLEMLARQLATAQPLTPEQIREAVEDLTDENIPAAAKADFLTALAQKGETPEEIAAFAFALREKSIAPPLDAETRAREILDVVGTGGDRLSTFNISTTVAILCAAAGVTVAKHGNRAVTSSVGSADVIEALGIRADLSPVEAARSLRENNFAFFFAPNFHPAFKNIAPARKLCAERGQRTIFNILGPLLNPARPSAALVGVSRPELCEPMAHALQSLGVRRVMVACGEAEGKNLDELSTLGANHIAEFYQERGFAVSNLSTENFPVQPATLADLRGGDKLANAEIIRRILRGEERGPKRDAVLLNAGAALFVAGKSKSLAEGWDLATETIDSGKAKAKLAELAS

Samples

Sample ID Description Type Environment
1 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
20 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
37 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
38 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
39 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
40 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
41 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
42 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
43 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
44 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
45 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
46 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
47 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
48 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
49 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
50 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
51 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
52 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
53 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
54 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
55 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
56 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
57 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
58 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
59 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
60 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
64 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
65 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
66 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
67 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
68 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
69 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
70 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
71 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
72 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
74 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
75 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
76 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
77 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
78 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
79 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
80 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
81 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
82 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
83 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
84 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
85 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
86 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
87 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
88 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
96 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
99 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
100 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.84
Metatranscriptomes 0
Isolates 1.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.58
Nodule 0
Rhizoplane 0
Rhizosphere 95.35
Stem 0
Stem Tuber 0
Unclassified 4.07

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10043650 3300003320 Bacteria 2382
2 rootH2_10080429 3300003320 Bacteria 5745
3 rootH1_10039392 3300003323 Bacteria 17215
4 rootH1_10104161 3300003323 Bacteria 4876
5 rootH1_10367365 3300003323 Bacteria 1492
6 Ga0068869_100000396 3300005334 Bacteria 23752
7 Ga0070689_100023072 3300005340 Bacteria 4654
8 Ga0070687_100162813 3300005343 Bacteria 1320
9 Ga0070688_100085532 3300005365 Unclassified 2050
10 Ga0070701_10004485 3300005438 Bacteria 5663
11 Ga0070701_10097900 3300005438 Bacteria 1619
12 Ga0070711_100210926 3300005439 Bacteria 1504
13 Ga0068867_100001014 3300005459 Bacteria 19180
14 Ga0070686_100000537 3300005544 Bacteria 22707
15 Ga0070686_100055032 3300005544 Bacteria 2547
16 Ga0070704_100013851 3300005549 Bacteria 5022
17 Ga0068855_100103801 3300005563 Bacteria 3270
18 Ga0068856_100018549 3300005614 Bacteria 6743
19 Ga0068859_100027777 3300005617 Bacteria 5675
20 Ga0068863_100064955 3300005841 Bacteria 3452
21 Ga0068863_100106790 3300005841 Bacteria 2664
22 Ga0068858_100042839 3300005842 Bacteria 4197
23 Ga0097621_100018031 3300006237 Bacteria 5381
24 Ga0068871_100019443 3300006358 Bacteria 5185
25 Ga0068871_100057583 3300006358 Bacteria 3162
26 Ga0068865_100004638 3300006881 Bacteria 8299
27 Ga0097620_100027777 3300006931 Bacteria 5675
28 Ga0105240_10064223 3300009093 Bacteria 4562
29 Ga0111539_10081442 3300009094 Archaea 3808
30 Ga0105242_10065610 3300009176 Bacteria 2995
31 Ga0105248_10297539 3300009177 Bacteria 1817
32 Ga0105238_10156931 3300009551 Bacteria 2251
33 Ga0207663_10180917 3300025916 Bacteria 1506
34 Ga0207694_10164274 3300025924 Bacteria 1795
35 Ga0207670_10010383 3300025936 Bacteria 5361
36 Ga0207670_10012687 3300025936 Bacteria 4938
37 Ga0207704_10178873 3300025938 Bacteria 1531
38 Ga0207711_10371091 3300025941 Bacteria 1327
39 Ga0207689_10000928 3300025942 Bacteria 28114
40 Ga0207677_10003452 3300026023 Bacteria 8374
41 Ga0207641_10169342 3300026088 Bacteria 1992
42 Ga0207648_10000814 3300026089 Bacteria 35290
43 Ga0265337_1000299 3300028556 Bacteria 26474
44 Ga0265337_1005962 3300028556 Bacteria 4758
45 Ga0265337_1009863 3300028556 Bacteria 3378
46 Ga0265337_1022609 3300028556 Bacteria 1945
47 Ga0265337_1029908 3300028556 Bacteria 1626
48 Ga0265337_1040550 3300028556 Bacteria 1342
49 Ga0265326_10012481 3300028558 Unclassified 2495
50 Ga0265319_1000007 3300028563 Bacteria 217194
51 Ga0265323_10000101 3300028653 Bacteria 48976
52 Ga0265323_10002555 3300028653 Bacteria 8275
53 Ga0265323_10003026 3300028653 Bacteria 7490
54 Ga0265323_10004895 3300028653 Bacteria 5725
55 Ga0265323_10008981 3300028653 Bacteria 4103
56 Ga0265323_10009412 3300028653 Bacteria 3993
57 Ga0265323_10014810 3300028653 Bacteria 3076
58 Ga0265323_10032340 3300028653 Unclassified 1940
59 Ga0265322_10000739 3300028654 Bacteria 11944
60 Ga0265322_10001942 3300028654 Bacteria 6538
61 Ga0265336_10010488 3300028666 Bacteria 3173
62 Ga0265336_10017280 3300028666 Bacteria 2350
63 Ga0265338_10000105 3300028800 Bacteria 156108
64 Ga0265338_10000431 3300028800 Bacteria 75210
65 Ga0265338_10002269 3300028800 Bacteria 29284
66 Ga0265338_10002454 3300028800 Bacteria 27760
67 Ga0265338_10005065 3300028800 Bacteria 17394
68 Ga0265338_10006737 3300028800 Bacteria 14511
69 Ga0265338_10014896 3300028800 Bacteria 8600
70 Ga0265338_10029204 3300028800 Bacteria 5473
71 Ga0265338_10038461 3300028800 Bacteria 4533
72 Ga0265338_10044145 3300028800 Bacteria 4120
73 Ga0265338_10070865 3300028800 Unclassified 2986
74 Ga0265338_10074632 3300028800 Bacteria 2883
75 Ga0265338_10103445 3300028800 Bacteria 2313
76 Ga0265338_10171946 3300028800 Bacteria 1660
77 Ga0265338_10216490 3300028800 Bacteria 1434
78 Ga0265324_10000322 3300029957 Bacteria 35202
79 Ga0265324_10000539 3300029957 Bacteria 25946
80 Ga0265324_10012799 3300029957 Bacteria 3150
81 Ga0265324_10020273 3300029957 Bacteria 2390
82 Ga0265330_10053321 3300031235 Bacteria 1770
83 Ga0265332_10071534 3300031238 Bacteria 1477
84 Ga0265320_10001146 3300031240 Bacteria 19499
85 Ga0265320_10001964 3300031240 Bacteria 14522
86 Ga0265320_10008545 3300031240 Bacteria 6260
87 Ga0265320_10019915 3300031240 Bacteria 3653
88 Ga0265320_10043533 3300031240 Bacteria 2219
89 Ga0265320_10063398 3300031240 Bacteria 1758
90 Ga0265325_10009235 3300031241 Bacteria 5766
91 Ga0265329_10020042 3300031242 Bacteria 2264
92 Ga0265340_10006747 3300031247 Bacteria 6282
93 Ga0265339_10042333 3300031249 Bacteria 2522
94 Ga0265339_10058646 3300031249 Bacteria 2078
95 Ga0265331_10053712 3300031250 Bacteria 1921
96 Ga0265327_10000981 3300031251 Bacteria 40636
97 Ga0265327_10003754 3300031251 Bacteria 14117
98 Ga0265327_10007219 3300031251 Bacteria 8630
99 Ga0265327_10033509 3300031251 Bacteria 2861
100 Ga0265316_10000887 3300031344 Bacteria 32794
101 Ga0265316_10017020 3300031344 Bacteria 6293
102 Ga0265316_10019085 3300031344 Bacteria 5874
103 Ga0265316_10074732 3300031344 Bacteria 2608
104 Ga0265316_10094856 3300031344 Bacteria 2273
105 Ga0265316_10115611 3300031344 Bacteria 2028
106 Ga0265316_10173136 3300031344 Bacteria 1609
107 Ga0265316_10195041 3300031344 Bacteria 1503
108 Ga0307408_100000017 3300031548 Bacteria 355890
109 Ga0265313_10005680 3300031595 Bacteria 9105
110 Ga0265313_10006935 3300031595 Bacteria 7869
111 Ga0316575_10013686 3300031665 Bacteria 3034
112 Ga0265314_10024305 3300031711 Bacteria 4596
113 Ga0265342_10042623 3300031712 Bacteria 2741
114 Ga0265342_10065708 3300031712 Bacteria 2125
115 Ga0265342_10104318 3300031712 Unclassified 1611
116 Ga0265342_10162643 3300031712 Bacteria 1233
117 Ga0307410_10006577 3300031852 Bacteria 6283
118 Ga0307412_10016354 3300031911 Bacteria 4418
119 Ga0307409_100001046 3300031995 Bacteria 12990
120 Ga0307416_100000034 3300032002 Bacteria 155632
121 Ga0307416_100107464 3300032002 Bacteria 2449
122 Ga0316580_10002794 3300032139 Bacteria 4865
123 Ga0373944_0066993 3300035089 Bacteria 1162
124 Ga0373945_0002695 3300035116 Bacteria 5573
125 Ga0373954_0012866 3300035118 Bacteria 3726
126 Ga0373956_0010475 3300035119 Bacteria 3801
127 Ga0316574_0169104 3300035398 Bacteria 1407
128 Ga0373931_0228547 3300035691 Bacteria 1123
129 Ga0373935_0444843 3300035692 Bacteria 935
130 Ga0373927_0016741 3300035695 Bacteria 4836
131 Ga0373937_0002350 3300036401 Bacteria 15772
132 Ga0373937_0094406 3300036401 Bacteria 2774
133 Ga0373925_0001271 3300037068 Bacteria 22275
134 Ga0395905_0000015 3300037471 Bacteria 393880
135 Ga0453684_0276891 3300044712 Unclassified 1915
136 Ga0451576_0000878 3300045051 Bacteria 57500
137 Ga0451576_0021097 3300045051 Bacteria 7082
138 Ga0451576_0212574 3300045051 Bacteria 2020
139 Ga0451576_0261199 3300045051 Unclassified 1810
140 Ga0451576_0546949 3300045051 Bacteria 1216
141 Ga0495629_0105218 3300046459 Unclassified 1968
142 Ga0495630_0005630 3300046517 Bacteria 8852
143 Ga0495630_0061705 3300046517 Bacteria 2815
144 Ga0495630_0279566 3300046517 Bacteria 1275
145 Ga0495640_0011774 3300046533 Bacteria 6712
146 Ga0495586_0001252 3300046535 Bacteria 14248
147 Ga0495667_0008890 3300046559 Bacteria 6829
148 Ga0495634_0010190 3300046642 Bacteria 6894
149 Ga0495658_0038041 3300046683 Unclassified 2662
150 Ga0495669_0055482 3300046684 Bacteria 1784
151 Ga0495613_0003132 3300046689 Bacteria 12388
152 Ga0495674_0037463 3300047319 Bacteria 4358
153 Ga0495674_0114297 3300047319 Bacteria 2286
154 Ga0495680_0022071 3300047322 Bacteria 5316
155 Ga0495680_0229623 3300047322 Bacteria 1322
156 Ga0495680_0433908 3300047322 Unclassified 902
157 Ga0501031_0000113 3300049568 Bacteria 43219
158 Ga0501032_0001671 3300049569 Bacteria 17620
159 Ga0501032_0118145 3300049569 Bacteria 1753
160 Ga0501033_0007884 3300049570 Bacteria 8251
161 Ga0501034_0026879 3300049571 Bacteria 5856
162 Ga0501037_0023784 3300049573 Bacteria 4530
163 Ga0501043_0135715 3300049579 Bacteria 1927
164 Ga0501043_0234850 3300049579 Bacteria 1415
165 Ga0501046_0182128 3300049580 Bacteria 1570
166 Ga0501080_0251144 3300049742 Bacteria 1613
167 Ga0501035_0003627 3300049822 Bacteria 14724
168 Ga0501044_0000792 3300049823 Bacteria 38210
169 nmdc:mga08y16_346784_c1 3300050511 Unclassified 1526
170 Ga0500650_0127738 3300053098 Unclassified 1182

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047322 Ga0495680_0433908 Ga0495680_0433908_24_872 277
2 3300035692 Ga0373935_0444843 Ga0373935_0444843_19_891 285
3 3300005343 Ga0070687_100162813 Ga0070687_1001628131 313
4 3300005438 Ga0070701_10004485 Ga0070701_100044853 313
5 3300005544 Ga0070686_100055032 Ga0070686_1000550322 313
6 3300005549 Ga0070704_100013851 Ga0070704_1000138513 313
7 3300031247 Ga0265340_10006747 Ga0265340_100067476 315
8 3300031251 Ga0265327_10033509 Ga0265327_100335092 319
9 3300025936 Ga0207670_10010383 Ga0207670_100103836 322
10 3300006237 Ga0097621_100018031 Ga0097621_1000180313 323
11 3300006358 Ga0068871_100019443 Ga0068871_1000194432 323
12 3300046684 Ga0495669_0055482 Ga0495669_0055482_102_1172 323
13 3300005614 Ga0068856_100018549 Ga0068856_1000185497 325
14 3300028653 Ga0265323_10003026 Ga0265323_100030264 326
15 3300028654 Ga0265322_10001942 Ga0265322_100019425 326
16 3300031238 Ga0265332_10071534 Ga0265332_100715341 326
17 3300031242 Ga0265329_10020042 Ga0265329_100200422 326
18 3300031344 Ga0265316_10019085 Ga0265316_100190856 326
19 3300045051 Ga0451576_0546949 Ga0451576_0546949_20_1027 326
20 3300031665 Ga0316575_10013686 Ga0316575_100136863 329
21 3300032139 Ga0316580_10002794 Ga0316580_100027944 329
22 3300035398 Ga0316574_0169104 Ga0316574_0169104_76_1179 329
23 3300053098 Ga0500650_0127738 Ga0500650_0127738_15_1010 330
24 3300031251 Ga0265327_10007219 Ga0265327_100072198 331
25 3300028556 Ga0265337_1000299 Ga0265337_100029911 332
26 3300028556 Ga0265337_1009863 Ga0265337_10098632 332
27 3300028666 Ga0265336_10010488 Ga0265336_100104882 332
28 3300028800 Ga0265338_10014896 Ga0265338_100148967 332
29 3300031344 Ga0265316_10173136 Ga0265316_101731361 332
30 3300028653 Ga0265323_10004895 Ga0265323_100048955 333
31 3300028653 Ga0265323_10014810 Ga0265323_100148103 334
32 3300028800 Ga0265338_10002269 Ga0265338_1000226914 334
33 3300029957 Ga0265324_10000539 Ga0265324_1000053913 334
34 3300028653 Ga0265323_10008981 Ga0265323_100089814 335
35 3300031249 Ga0265339_10042333 Ga0265339_100423333 335
36 3300044712 Ga0453684_0276891 Ga0453684_0276891_28_1041 335
37 3300045051 Ga0451576_0212574 Ga0451576_0212574_330_1355 335
38 iso_pu_bacteria 8057473075 8057478275 335
39 3300028800 Ga0265338_10103445 Ga0265338_101034452 336
40 3300031240 Ga0265320_10063398 Ga0265320_100633983 336
41 3300028653 Ga0265323_10002555 Ga0265323_100025555 337
42 3300028800 Ga0265338_10005065 Ga0265338_100050658 342
43 3300028800 Ga0265338_10074632 Ga0265338_100746322 342
44 3300028800 Ga0265338_10171946 Ga0265338_101719462 342
45 iso_pu_bacteria 2786546940 2788434406 342
46 3300003320 rootH2_10080429 rootH2_100804292 343
47 3300003323 rootH1_10039392 rootH1_100393927 343
48 3300003323 rootH1_10104161 rootH1_101041615 343
49 3300003323 rootH1_10367365 rootH1_103673652 343
50 3300005334 Ga0068869_100000396 Ga0068869_1000003969 343
51 3300005459 Ga0068867_100001014 Ga0068867_10000101416 343
52 3300005544 Ga0070686_100000537 Ga0070686_1000005374 343
53 3300005563 Ga0068855_100103801 Ga0068855_1001038013 343
54 3300005617 Ga0068859_100027777 Ga0068859_1000277776 343
55 3300005841 Ga0068863_100106790 Ga0068863_1001067903 343
56 3300006358 Ga0068871_100057583 Ga0068871_1000575832 343
57 3300006881 Ga0068865_100004638 Ga0068865_1000046382 343
58 3300006931 Ga0097620_100027777 Ga0097620_1000277776 343
59 3300009176 Ga0105242_10065610 Ga0105242_100656102 343
60 3300009177 Ga0105248_10297539 Ga0105248_102975392 343
61 3300025938 Ga0207704_10178873 Ga0207704_101788732 343
62 3300025941 Ga0207711_10371091 Ga0207711_103710911 343
63 3300025942 Ga0207689_10000928 Ga0207689_1000092812 343
64 3300026023 Ga0207677_10003452 Ga0207677_100034522 343
65 3300026089 Ga0207648_10000814 Ga0207648_100008144 343
66 3300028556 Ga0265337_1005962 Ga0265337_10059624 343
67 3300028556 Ga0265337_1022609 Ga0265337_10226092 343
68 3300028556 Ga0265337_1029908 Ga0265337_10299082 343
69 3300028556 Ga0265337_1040550 Ga0265337_10405502 343
70 3300028558 Ga0265326_10012481 Ga0265326_100124814 343
71 3300028563 Ga0265319_1000007 Ga0265319_100000766 343
72 3300028653 Ga0265323_10000101 Ga0265323_1000010126 343
73 3300028653 Ga0265323_10009412 Ga0265323_100094122 343
74 3300028654 Ga0265322_10000739 Ga0265322_100007395 343
75 3300028800 Ga0265338_10000105 Ga0265338_10000105128 343
76 3300028800 Ga0265338_10000431 Ga0265338_1000043144 343
77 3300028800 Ga0265338_10029204 Ga0265338_100292042 343
78 3300028800 Ga0265338_10070865 Ga0265338_100708652 343
79 3300029957 Ga0265324_10000322 Ga0265324_1000032218 343
80 3300029957 Ga0265324_10020273 Ga0265324_100202732 343
81 3300031235 Ga0265330_10053321 Ga0265330_100533211 343
82 3300031240 Ga0265320_10001146 Ga0265320_100011468 343
83 3300031240 Ga0265320_10008545 Ga0265320_100085454 343
84 3300031241 Ga0265325_10009235 Ga0265325_100092352 343
85 3300031249 Ga0265339_10058646 Ga0265339_100586462 343
86 3300031250 Ga0265331_10053712 Ga0265331_100537122 343
87 3300031251 Ga0265327_10003754 Ga0265327_100037542 343
88 3300031344 Ga0265316_10000887 Ga0265316_1000088723 343
89 3300031344 Ga0265316_10017020 Ga0265316_100170202 343
90 3300031344 Ga0265316_10074732 Ga0265316_100747322 343
91 3300031344 Ga0265316_10115611 Ga0265316_101156112 343
92 3300031548 Ga0307408_100000017 Ga0307408_100000017127 343
93 3300031595 Ga0265313_10005680 Ga0265313_100056809 343
94 3300031595 Ga0265313_10006935 Ga0265313_100069352 343
95 3300031712 Ga0265342_10042623 Ga0265342_100426232 343
96 3300031712 Ga0265342_10065708 Ga0265342_100657082 343
97 3300031712 Ga0265342_10104318 Ga0265342_101043182 343
98 3300031712 Ga0265342_10162643 Ga0265342_101626431 343
99 3300031852 Ga0307410_10006577 Ga0307410_100065773 343
100 3300031911 Ga0307412_10016354 Ga0307412_100163542 343
101 3300031995 Ga0307409_100001046 Ga0307409_1000010461 343
102 3300032002 Ga0307416_100000034 Ga0307416_100000034116 343
103 3300035118 Ga0373954_0012866 Ga0373954_0012866_1633_2667 343
104 3300035119 Ga0373956_0010475 Ga0373956_0010475_1777_2811 343
105 3300035691 Ga0373931_0228547 Ga0373931_0228547_26_1087 343
106 3300036401 Ga0373937_0002350 Ga0373937_0002350_8385_9419 343
107 3300036401 Ga0373937_0094406 Ga0373937_0094406_910_2094 343
108 3300037471 Ga0395905_0000015 Ga0395905_0000015_15348_16394 343
109 3300045051 Ga0451576_0000878 Ga0451576_0000878_1025_2074 343
110 3300046459 Ga0495629_0105218 Ga0495629_0105218_105_1139 343
111 3300046517 Ga0495630_0061705 Ga0495630_0061705_869_2053 343
112 3300046517 Ga0495630_0279566 Ga0495630_0279566_42_1076 343
113 3300046533 Ga0495640_0011774 Ga0495640_0011774_511_1545 343
114 3300046535 Ga0495586_0001252 Ga0495586_0001252_8902_9936 343
115 3300046559 Ga0495667_0008890 Ga0495667_0008890_3508_4542 343
116 3300046642 Ga0495634_0010190 Ga0495634_0010190_4783_5817 343
117 3300046689 Ga0495613_0003132 Ga0495613_0003132_3176_4210 343
118 3300047322 Ga0495680_0022071 Ga0495680_0022071_3053_4087 343
119 3300047322 Ga0495680_0229623 Ga0495680_0229623_162_1259 343
120 3300005439 Ga0070711_100210926 Ga0070711_1002109261 344
121 3300009094 Ga0111539_10081442 Ga0111539_100814422 344
122 3300025916 Ga0207663_10180917 Ga0207663_101809172 344
123 3300028653 Ga0265323_10032340 Ga0265323_100323402 344
124 3300028666 Ga0265336_10017280 Ga0265336_100172802 344
125 3300028800 Ga0265338_10002454 Ga0265338_1000245410 344
126 3300028800 Ga0265338_10006737 Ga0265338_1000673715 344
127 3300028800 Ga0265338_10038461 Ga0265338_100384613 344
128 3300028800 Ga0265338_10044145 Ga0265338_100441453 344
129 3300029957 Ga0265324_10012799 Ga0265324_100127994 344
130 3300031240 Ga0265320_10019915 Ga0265320_100199153 344
131 3300031251 Ga0265327_10000981 Ga0265327_1000098137 344
132 3300031344 Ga0265316_10094856 Ga0265316_100948562 344
133 3300031344 Ga0265316_10195041 Ga0265316_101950412 344
134 3300031711 Ga0265314_10024305 Ga0265314_100243054 344
135 3300035089 Ga0373944_0066993 Ga0373944_0066993_77_1129 344
136 3300035116 Ga0373945_0002695 Ga0373945_0002695_304_1356 344
137 3300035695 Ga0373927_0016741 Ga0373927_0016741_1728_2780 344
138 3300037068 Ga0373925_0001271 Ga0373925_0001271_7476_8528 344
139 3300045051 Ga0451576_0261199 Ga0451576_0261199_539_1624 344
140 3300049568 Ga0501031_0000113 Ga0501031_0000113_10866_11918 344
141 3300049569 Ga0501032_0001671 Ga0501032_0001671_12304_13356 344
142 3300049569 Ga0501032_0118145 Ga0501032_0118145_499_1554 344
143 3300049570 Ga0501033_0007884 Ga0501033_0007884_3963_5015 344
144 3300049571 Ga0501034_0026879 Ga0501034_0026879_1839_2930 344
145 3300049573 Ga0501037_0023784 Ga0501037_0023784_3371_4426 344
146 3300049579 Ga0501043_0135715 Ga0501043_0135715_402_1493 344
147 3300049579 Ga0501043_0234850 Ga0501043_0234850_170_1225 344
148 3300049580 Ga0501046_0182128 Ga0501046_0182128_88_1140 344
149 3300049742 Ga0501080_0251144 Ga0501080_0251144_479_1534 344
150 3300049822 Ga0501035_0003627 Ga0501035_0003627_3540_4592 344
151 3300049823 Ga0501044_0000792 Ga0501044_0000792_26661_27713 344
152 3300050511 nmdc:mga08y16_346784_c1 nmdc:mga08y16_346784_c1_314_1369 344
153 3300046517 Ga0495630_0005630 Ga0495630_0005630_4555_5595 345
154 3300046683 Ga0495658_0038041 Ga0495658_0038041_1534_2607 345
155 3300047319 Ga0495674_0037463 Ga0495674_0037463_372_1412 345
156 3300005340 Ga0070689_100023072 Ga0070689_1000230722 346
157 3300005365 Ga0070688_100085532 Ga0070688_1000855322 346
158 3300005438 Ga0070701_10097900 Ga0070701_100979001 346
159 3300005841 Ga0068863_100064955 Ga0068863_1000649553 346
160 3300005842 Ga0068858_100042839 Ga0068858_1000428394 346
161 3300009093 Ga0105240_10064223 Ga0105240_100642233 346
162 3300025936 Ga0207670_10012687 Ga0207670_100126873 346
163 3300026088 Ga0207641_10169342 Ga0207641_101693422 346
164 3300028800 Ga0265338_10216490 Ga0265338_102164902 346
165 3300031240 Ga0265320_10001964 Ga0265320_100019646 346
166 3300031240 Ga0265320_10043533 Ga0265320_100435334 346
167 3300032002 Ga0307416_100107464 Ga0307416_1001074642 346
168 3300045051 Ga0451576_0021097 Ga0451576_0021097_2908_3951 346
169 3300047319 Ga0495674_0114297 Ga0495674_0114297_1182_2240 346
170 3300003320 rootH2_10043650 rootH2_100436502 347
171 3300009551 Ga0105238_10156931 Ga0105238_101569312 347
172 3300025924 Ga0207694_10164274 Ga0207694_101642742 347

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00591

Glycos_transf_3

Glycosyl transferase family, a/b domain

126

386

0.96

PF02885

Glycos_trans_3N

Glycosyl transferase family, helical bundle domain

53

115

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1khd-assembly2.cif.gz_C crystal structure analysis of the anthranilate phosphoribosyltransferase from erwinia carotovora at 1.9 resolution (current name, pectobacterium carotovorum) 0.9587 2 343
1zyk-assembly2.cif.gz_B anthranilate phosphoribosyltransferase in complex with prpp, anthranilate and magnesium 0.9585 2 343
1khd-assembly1.cif.gz_A crystal structure analysis of the anthranilate phosphoribosyltransferase from erwinia carotovora at 1.9 resolution (current name, pectobacterium carotovorum) 0.9581 2 343
3gbr-assembly1.cif.gz_B anthranilate phosphoribosyl-transferase (trpd) double mutant d83g f149s from s. solfataricus 0.9571 2 342
3gbr-assembly1.cif.gz_A anthranilate phosphoribosyl-transferase (trpd) double mutant d83g f149s from s. solfataricus 0.9566 2 342
ID Description Score Start End Superfamily
af_Q2FYR7_70_332_3.40.1030.10 Alpha Beta;3-Layer(aba) Sandwich;Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2;Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.9708 79 342 3.40.1030.10
af_Q57686_71_335_3.40.1030.10 Alpha Beta;3-Layer(aba) Sandwich;Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2;Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.9666 78 343 3.40.1030.10
af_K7WHC8_126_393_3.40.1030.10 Alpha Beta;3-Layer(aba) Sandwich;Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2;Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.9609 79 344 3.40.1030.10
3gbrB02 Alpha Beta;3-Layer(aba) Sandwich;Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2;Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.947 78 342 3.40.1030.10
af_P00904_275_530_3.40.1030.10 Alpha Beta;3-Layer(aba) Sandwich;Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2;Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.9468 81 343 3.40.1030.10
ID Description Score Start End GO Terms
AF-A0A2V6NNE8-F1-model_v4 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.98 1 344 GO:0000162
GO:0000287
GO:0004048
GO:0005829
AF-A0A357TI85-F1-model_v4 Anthranilate phosphoribosyltransferase 0.9776 208 342 GO:0000162
GO:0004048
GO:0005829
AF-A0A417P7B2-F1-model_v4 deleted 0.9774 2 343
AF-A0A6G6KFB8-F1-model_v4 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.977 1 343 GO:0000162
GO:0000287
GO:0004048
GO:0005829
AF-A0A2G6J3D8-F1-model_v4 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.975 2 343 GO:0000162
GO:0000287
GO:0004048
GO:0005829

Feature Viewer

pLDDT pTM Quality
95.25 0.93 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map