F260387

General Info

Members Datasets Scaffolds Average Seq Length
172 113 344 327

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100093527|Ga0068856_1000935273
Length 356
Sequence MERATILRCGIRAVLWRTRGDERESRSRVRTLVTGGAGYIGSVIVEELQRAGHTPIVYDSFVKGHRAALPAGVAVVEGDIRDTALLTRTLAEQRIEAVIHMVGLIEVGLSASDPAAFFETNVGGSMSVVRAMIEAGSEMDVKRLVFSSSAAVYADDAPLPLREDAPTGPSSAYGASKLMVEQLLGWVAPVHGLICTSLRYFNAAGATERNGEAHEPETHLMPLVLRAAERDEGVSLFGTDYPTVDGTCVRDYVHVRDLASAHLLALGLSEPGVQTYNVGSGTGHSVRQVIEMAREVTGRALPVIERPRRAGDQYATVAASERIERELGWRPQYSDLRTLLATAWAWRQTHPNGYAE

Samples

Sample ID Description Type Environment
1 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
64 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
65 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
84 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
87 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
92 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
93 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
94 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
95 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
96 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
97 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
98 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
99 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
100 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
103 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
104 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
105 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
106 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
107 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
108 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
109 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
110 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
111 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
112 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
113 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 93.6
Stem 0
Stem Tuber 0
Unclassified 2.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068856_100093527 3300005614 Bacteria 2992
2 Ga0065704_10111874 3300005289 Bacteria 1946
3 Ga0065715_10106870 3300005293 Bacteria 2804
4 Ga0065707_10148596 3300005295 Bacteria 1684
5 Ga0070683_100003187 3300005329 Bacteria 13236
6 Ga0070683_100429669 3300005329 Unclassified 1260
7 Ga0070690_100014046 3300005330 Bacteria 4747
8 Ga0068869_100037173 3300005334 Bacteria 3461
9 Ga0070682_100105528 3300005337 Bacteria 1868
10 Ga0070689_100107325 3300005340 Bacteria 2217
11 Ga0070692_10157199 3300005345 Bacteria 1299
12 Ga0070668_100270487 3300005347 Bacteria 1416
13 Ga0070671_100053528 3300005355 Bacteria 3355
14 Ga0070688_100003251 3300005365 Bacteria 8325
15 Ga0070667_100143158 3300005367 Bacteria 2095
16 Ga0070703_10002788 3300005406 Bacteria 5003
17 Ga0070709_10005085 3300005434 Bacteria 7107
18 Ga0070713_100060884 3300005436 Bacteria 3157
19 Ga0070711_100107496 3300005439 Bacteria 2042
20 Ga0070694_100002266 3300005444 Bacteria 11370
21 Ga0070694_100159944 3300005444 Bacteria 1652
22 Ga0070708_100001079 3300005445 Bacteria 20848
23 Ga0070708_100040060 3300005445 Bacteria 4102
24 Ga0070708_100079423 3300005445 Bacteria 2968
25 Ga0070708_100109905 3300005445 Bacteria 2533
26 Ga0070708_100128628 3300005445 Bacteria 2343
27 Ga0070708_100456951 3300005445 Unclassified 1205
28 Ga0070681_10008689 3300005458 Bacteria 9963
29 Ga0068867_100068061 3300005459 Bacteria 2657
30 Ga0070706_100005294 3300005467 Bacteria 12298
31 Ga0070706_100020300 3300005467 Bacteria 6123
32 Ga0070706_100408314 3300005467 Bacteria 1264
33 Ga0070707_100012891 3300005468 Bacteria 7808
34 Ga0070707_100035318 3300005468 Bacteria 4768
35 Ga0070707_100095740 3300005468 Bacteria 2875
36 Ga0070698_100002535 3300005471 Bacteria 20113
37 Ga0070698_100054943 3300005471 Bacteria 4041
38 Ga0070698_100074386 3300005471 Bacteria 3403
39 Ga0070698_100221346 3300005471 Bacteria 1826
40 Ga0070699_100000121 3300005518 Bacteria 72013
41 Ga0070684_100128806 3300005535 Bacteria 2282
42 Ga0070697_100159506 3300005536 Unclassified 1905
43 Ga0070697_100257650 3300005536 Bacteria 1493
44 Ga0070695_100131038 3300005545 Bacteria 1728
45 Ga0070696_100005359 3300005546 Bacteria 8557
46 Ga0070696_100067729 3300005546 Bacteria 2506
47 Ga0070696_100331890 3300005546 Bacteria 1173
48 Ga0070693_100138888 3300005547 Unclassified 1527
49 Ga0070704_100070067 3300005549 Bacteria 2543
50 Ga0068859_100004881 3300005617 Bacteria 13657
51 Ga0068859_100044909 3300005617 Bacteria 4439
52 Ga0068864_100008879 3300005618 Bacteria 8288
53 Ga0068861_100142420 3300005719 Bacteria 1958
54 Ga0068861_100234584 3300005719 Bacteria 1558
55 Ga0068863_100108791 3300005841 Unclassified 2638
56 Ga0068858_100000645 3300005842 Bacteria 36364
57 Ga0068860_100011022 3300005843 Bacteria 8913
58 Ga0068862_100011583 3300005844 Bacteria 7275
59 Ga0068862_100033693 3300005844 Bacteria 4332
60 Ga0081538_10024948 3300005981 Bacteria 4239
61 Ga0097621_100074810 3300006237 Bacteria 2806
62 Ga0075428_100053660 3300006844 Bacteria 4417
63 Ga0075431_100024119 3300006847 Bacteria 6229
64 Ga0075433_10001266 3300006852 Bacteria 18449
65 Ga0075433_10019200 3300006852 Bacteria 5690
66 Ga0075433_10027122 3300006852 Bacteria 4856
67 Ga0075433_10027919 3300006852 Bacteria 4794
68 Ga0075433_10086542 3300006852 Bacteria 2767
69 Ga0075433_10367130 3300006852 Bacteria 1271
70 Ga0075434_100000200 3300006871 Bacteria 40321
71 Ga0075434_100095815 3300006871 Bacteria 2973
72 Ga0075434_100101757 3300006871 Bacteria 2880
73 Ga0075429_100058120 3300006880 Bacteria 3368
74 Ga0068865_100217706 3300006881 Bacteria 1491
75 Ga0075436_100004720 3300006914 Bacteria 9348
76 Ga0075436_100006736 3300006914 Bacteria 7865
77 Ga0075436_100015497 3300006914 Bacteria 5218
78 Ga0097620_100004881 3300006931 Bacteria 13657
79 Ga0097620_100044907 3300006931 Bacteria 4439
80 Ga0075435_100000015 3300007076 Bacteria 100708
81 Ga0075435_100060488 3300007076 Bacteria 3072
82 Ga0075435_100461249 3300007076 Bacteria 1096
83 Ga0111539_10000055 3300009094 Bacteria 115027
84 Ga0114129_10112003 3300009147 Bacteria 3764
85 Ga0114129_10682244 3300009147 Bacteria 1322
86 Ga0105242_10167211 3300009176 Bacteria 1930
87 Ga0105248_10001696 3300009177 Bacteria 24525
88 Ga0105248_10070030 3300009177 Bacteria 3939
89 Ga0105249_10050451 3300009553 Bacteria 3793
90 Ga0105246_10397389 3300011119 Bacteria 1144
91 Ga0163162_10003873 3300013306 Bacteria 14362
92 Ga0157372_10129744 3300013307 Bacteria 2899
93 Ga0157375_10092188 3300013308 Bacteria 3093
94 Ga0163163_10037714 3300014325 Bacteria 4703
95 Ga0157379_10001191 3300014968 Bacteria 21180
96 Ga0163161_10000531 3300017792 Bacteria 31187
97 Ga0213874_10001666 3300021377 Bacteria 4663
98 Ga0213875_10000006 3300021388 Bacteria 579005
99 Ga0213875_10048222 3300021388 Bacteria 1998
100 Ga0207653_10001919 3300025885 Bacteria 6648
101 Ga0207699_10003917 3300025906 Bacteria 7113
102 Ga0207684_10027054 3300025910 Bacteria 4891
103 Ga0207684_10050886 3300025910 Bacteria 3515
104 Ga0207646_10054768 3300025922 Bacteria 3567
105 Ga0207646_10123223 3300025922 Bacteria 2330
106 Ga0207646_10213550 3300025922 Bacteria 1743
107 Ga0207644_10103133 3300025931 Bacteria 2146
108 Ga0207711_10003865 3300025941 Bacteria 12886
109 Ga0207689_10044831 3300025942 Bacteria 3657
110 Ga0207689_10349000 3300025942 Bacteria 1230
111 Ga0207661_10021916 3300025944 Bacteria 4797
112 Ga0207679_10263633 3300025945 Bacteria 1471
113 Ga0207712_10111328 3300025961 Bacteria 2054
114 Ga0207658_10024992 3300025986 Bacteria 4180
115 Ga0207703_10001165 3300026035 Bacteria 24823
116 Ga0207702_10143228 3300026078 Bacteria 2166
117 Ga0207648_10008782 3300026089 Bacteria 9735
118 Ga0207676_10118792 3300026095 Bacteria 2225
119 Ga0207675_100025317 3300026118 Bacteria 5522
120 Ga0207675_100138796 3300026118 Bacteria 2308
121 Ga0207428_10000204 3300027907 Bacteria 82492
122 Ga0268265_10016965 3300028380 Bacteria 5014
123 Ga0268265_10436159 3300028380 Bacteria 1220
124 Ga0373951_0000085 3300035091 Bacteria 37010
125 Ga0436364_0464964 3300037853 Bacteria 6436
126 Ga0436364_0478514 3300037853 Bacteria 578677
127 Ga0436364_0573140 3300037853 Bacteria 101258
128 Ga0436364_0687138 3300037853 Bacteria 2456
129 Ga0436364_1241863 3300037853 Bacteria 4759
130 Ga0436365_1001389 3300039437 Bacteria 6085
131 Ga0436365_1308381 3300039437 Bacteria 3816
132 Ga0436363_0570872 3300039450 Bacteria 4679
133 Ga0439446_0058007 3300042156 Bacteria 1166
134 Ga0451577_0002528 3300042876 Bacteria 21641
135 Ga0451577_0209290 3300042876 Bacteria 1762
136 Ga0453683_0002276 3300044673 Bacteria 15150
137 Ga0453683_0011623 3300044673 Bacteria 5799
138 Ga0453684_0002502 3300044712 Bacteria 44337
139 Ga0451576_0005079 3300045051 Bacteria 16683
140 Ga0495582_0003087 3300046473 Bacteria 9338
141 Ga0495639_0035095 3300046475 Bacteria 2244
142 Ga0495594_0031688 3300046499 Bacteria 2867
143 Ga0495598_0003759 3300046537 Bacteria 3245
144 Ga0495659_0000180 3300046664 Bacteria 27768
145 Ga0495588_0042752 3300046674 Bacteria 2317
146 Ga0495658_0000976 3300046683 Bacteria 15183
147 Ga0495676_0078700 3300047321 Bacteria 2509
148 Ga0501034_0038512 3300049571 Bacteria 4841
149 Ga0501043_0254889 3300049579 Bacteria 1351
150 Ga0501075_0080295 3300049591 Bacteria 2469
151 Ga0501081_0117923 3300049743 Bacteria 1888
152 nmdc:mga05p37_194846_c1 3300050507 Bacteria 2457
153 nmdc:mga05p37_424532_c1 3300050507 Bacteria 1546
154 nmdc:mga06r32_34840_c1 3300050510 Bacteria 4749
155 nmdc:mga06r32_88801_c1 3300050510 Bacteria 3017
156 nmdc:mga08y16_1331_c1 3300050511 Bacteria 24615
157 nmdc:mga0n895_12958_c1 3300050512 Bacteria 7498
158 nmdc:mga0n895_22048_c1 3300050512 Bacteria 5968
159 nmdc:mga0n895_42304_c1 3300050512 Bacteria 4432
160 nmdc:mga0n895_5007_c1 3300050512 Bacteria 10991
161 nmdc:mga0rr50_4646_c1 3300050513 Bacteria 8093
162 nmdc:mga08x19_22449_c1 3300050514 Bacteria 3908
163 nmdc:mga08x19_26072_c1 3300050514 Bacteria 3646
164 nmdc:mga0a205_26512_c1 3300050515 Bacteria 5528
165 nmdc:mga0a205_380856_c1 3300050515 Bacteria 1276
166 nmdc:mga0a205_393_c1 3300050515 Bacteria 33335
167 nmdc:mga0a205_53517_c1 3300050515 Bacteria 3896
168 nmdc:mga0a205_6611_c1 3300050515 Bacteria 10489
169 nmdc:mga0a205_8882_c1 3300050515 Bacteria 9156
170 Ga0495612_0029529 3300053078 Bacteria 2209
171 Ga0590071_013550 3300059421 Bacteria 1909
172 Ga0530510_0033457 3300061734 Bacteria 3701
173 Ga0068856_100093527
174 Ga0065704_10111874
175 Ga0065715_10106870
176 Ga0065707_10148596
177 Ga0070683_100003187
178 Ga0070683_100429669
179 Ga0070690_100014046
180 Ga0068869_100037173
181 Ga0070682_100105528
182 Ga0070689_100107325
183 Ga0070692_10157199
184 Ga0070668_100270487
185 Ga0070671_100053528
186 Ga0070688_100003251
187 Ga0070667_100143158
188 Ga0070703_10002788
189 Ga0070709_10005085
190 Ga0070713_100060884
191 Ga0070711_100107496
192 Ga0070694_100002266
193 Ga0070694_100159944
194 Ga0070708_100001079
195 Ga0070708_100040060
196 Ga0070708_100079423
197 Ga0070708_100109905
198 Ga0070708_100128628
199 Ga0070708_100456951
200 Ga0070681_10008689
201 Ga0068867_100068061
202 Ga0070706_100005294
203 Ga0070706_100020300
204 Ga0070706_100408314
205 Ga0070707_100012891
206 Ga0070707_100035318
207 Ga0070707_100095740
208 Ga0070698_100002535
209 Ga0070698_100054943
210 Ga0070698_100074386
211 Ga0070698_100221346
212 Ga0070699_100000121
213 Ga0070684_100128806
214 Ga0070697_100159506
215 Ga0070697_100257650
216 Ga0070695_100131038
217 Ga0070696_100005359
218 Ga0070696_100067729
219 Ga0070696_100331890
220 Ga0070693_100138888
221 Ga0070704_100070067
222 Ga0068859_100004881
223 Ga0068859_100044909
224 Ga0068864_100008879
225 Ga0068861_100142420
226 Ga0068861_100234584
227 Ga0068863_100108791
228 Ga0068858_100000645
229 Ga0068860_100011022
230 Ga0068862_100011583
231 Ga0068862_100033693
232 Ga0081538_10024948
233 Ga0097621_100074810
234 Ga0075428_100053660
235 Ga0075431_100024119
236 Ga0075433_10001266
237 Ga0075433_10019200
238 Ga0075433_10027122
239 Ga0075433_10027919
240 Ga0075433_10086542
241 Ga0075433_10367130
242 Ga0075434_100000200
243 Ga0075434_100095815
244 Ga0075434_100101757
245 Ga0075429_100058120
246 Ga0068865_100217706
247 Ga0075436_100004720
248 Ga0075436_100006736
249 Ga0075436_100015497
250 Ga0097620_100004881
251 Ga0097620_100044907
252 Ga0075435_100000015
253 Ga0075435_100060488
254 Ga0075435_100461249
255 Ga0111539_10000055
256 Ga0114129_10112003
257 Ga0114129_10682244
258 Ga0105242_10167211
259 Ga0105248_10001696
260 Ga0105248_10070030
261 Ga0105249_10050451
262 Ga0105246_10397389
263 Ga0163162_10003873
264 Ga0157372_10129744
265 Ga0157375_10092188
266 Ga0163163_10037714
267 Ga0157379_10001191
268 Ga0163161_10000531
269 Ga0213874_10001666
270 Ga0213875_10000006
271 Ga0213875_10048222
272 Ga0207653_10001919
273 Ga0207699_10003917
274 Ga0207684_10027054
275 Ga0207684_10050886
276 Ga0207646_10054768
277 Ga0207646_10123223
278 Ga0207646_10213550
279 Ga0207644_10103133
280 Ga0207711_10003865
281 Ga0207689_10044831
282 Ga0207689_10349000
283 Ga0207661_10021916
284 Ga0207679_10263633
285 Ga0207712_10111328
286 Ga0207658_10024992
287 Ga0207703_10001165
288 Ga0207702_10143228
289 Ga0207648_10008782
290 Ga0207676_10118792
291 Ga0207675_100025317
292 Ga0207675_100138796
293 Ga0207428_10000204
294 Ga0268265_10016965
295 Ga0268265_10436159
296 Ga0373951_0000085
297 Ga0436364_0464964
298 Ga0436364_0478514
299 Ga0436364_0573140
300 Ga0436364_0687138
301 Ga0436364_1241863
302 Ga0436365_1001389
303 Ga0436365_1308381
304 Ga0436363_0570872
305 Ga0439446_0058007
306 Ga0451577_0002528
307 Ga0451577_0209290
308 Ga0453683_0002276
309 Ga0453683_0011623
310 Ga0453684_0002502
311 Ga0451576_0005079
312 Ga0495582_0003087
313 Ga0495639_0035095
314 Ga0495594_0031688
315 Ga0495598_0003759
316 Ga0495659_0000180
317 Ga0495588_0042752
318 Ga0495658_0000976
319 Ga0495676_0078700
320 Ga0501034_0038512
321 Ga0501043_0254889
322 Ga0501075_0080295
323 Ga0501081_0117923
324 nmdc:mga05p37_194846_c1
325 nmdc:mga05p37_424532_c1
326 nmdc:mga06r32_34840_c1
327 nmdc:mga06r32_88801_c1
328 nmdc:mga08y16_1331_c1
329 nmdc:mga0n895_12958_c1
330 nmdc:mga0n895_22048_c1
331 nmdc:mga0n895_42304_c1
332 nmdc:mga0n895_5007_c1
333 nmdc:mga0rr50_4646_c1
334 nmdc:mga08x19_22449_c1
335 nmdc:mga08x19_26072_c1
336 nmdc:mga0a205_26512_c1
337 nmdc:mga0a205_380856_c1
338 nmdc:mga0a205_393_c1
339 nmdc:mga0a205_53517_c1
340 nmdc:mga0a205_6611_c1
341 nmdc:mga0a205_8882_c1
342 Ga0495612_0029529
343 Ga0590071_013550
344 Ga0530510_0033457

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

31

279

0.95

PF04321

RmlD_sub_bind

RmlD substrate binding domain

29

209

0.89

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

32

341

0.83

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

32

186

0.78

PF13460

NAD_binding_10

NAD(P)H-binding

35

186

0.72

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

31

207

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j34-assembly1.cif.gz_A crystal structure of kynurenine 3-monooxygenase - truncated at position 394 plus his tag cleaved. 0.9626 2 31
4j33-assembly2.cif.gz_B crystal structure of kynurenine 3-monooxygenase (kmo-394) 0.954 2 31
4j36-assembly1.cif.gz_A cocrystal structure of kynurenine 3-monooxygenase in complex with upf 648 inhibitor(kmo-394upf) 0.9529 1 31
5x6r-assembly1.cif.gz_A crystal structure of saccharomyces cerevisiae kmo in complex with ro 61-8048 0.9466 2 32
2c20-assembly3.cif.gz_F crystal structure of udp-glucose 4-epimerase 0.9322 1 288
ID Description Score Start End Superfamily
af_P26646_4_324_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9548 2 30 2.40.50.140
af_A0A1D6PCE2_262_419_3.90.25.10 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9524 135 286 3.90.25.10
2c20D02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9519 135 288 3.90.25.10
af_A0A1D6K005_288_418_3.90.25.10 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9498 156 285 3.90.25.10
4j36B00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9463 2 31 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A529Y8X6-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9945 1 72
AF-A0A382UEF1-F1-model_v4 NAD-dependent epimerase/dehydratase domain-containing protein 0.9918 1 71
AF-A0A3B8MTZ3-F1-model_v4 UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) 0.9876 1 75 GO:0016853
GO:0033499
AF-A0A7W0YBG6-F1-model_v4 UDP-glucose 4-epimerase 0.9855 114 288 GO:0016853
GO:0033499
AF-A0A2V8PFR4-F1-model_v4 UDP-glucose 4-epimerase 0.9852 177 288 GO:0016853
GO:0033499

Map