F259713
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 171 | 144 | 342 | 461 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2558860280|2559427535 |
| Length | 512 |
| Sequence | DEGAYHLRVSLHLYDTATRSLRAFQPARSGTVSIYECGATVQGAPHLGHIRGAVNFDVLRRWLEHDGTDVLHVRNVTDIDDKVLAKAAAADRPWWEWASTHEREFLDAYETLGCLPASISPRATGHITQMIELMQRLIDRGHAYAANGDVYFAVASFPEYGALSGQKLDEVVQGESAATGKRDPRDFTLWKGAKPGEPSWPTPWGPGRPGWHLECSAMSTYYLGPEFDIHGGGLDLVFPHHENEQAQSRAAGDAFSRYWMHWSWVTMSGEKMSKSLGNVMSIPAMLTKARAVELRYYLVGPHYRSTIEYSDTALDEAVTAYGRIENFVQRVVQQTGSVEPGVLCADFTAAMDDDLSTPSALAAVHSTVREGNVALDNGDQDGARGAAGSVRAMMDVLGLDPLSDRWSRSSTADNSMQQALDVLVGHLLEERQRARAERDFATADLLRDRLSKAGVTDNLGPELMQWVLDRVTCRVGNVRLSRTCQIISGQQPPTRRIISRKSSGLTTSQHPQ |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300002073 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 | Metagenome | Rhizosphere |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 7 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 17 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 18 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 19 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 21 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 22 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 23 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 24 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 25 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 26 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 27 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 33 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 34 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 58 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 59 | 3300030732 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 | Metagenome | Rhizosphere |
| 60 | 3300030733 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 | Metagenome | Rhizosphere |
| 61 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 62 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 63 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 64 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 65 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 66 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 67 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 68 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 69 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 70 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 71 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 72 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 73 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 74 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 75 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 76 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 77 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 78 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 79 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 80 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 81 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 82 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 83 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 84 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 85 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 86 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 87 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 88 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 89 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 90 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 91 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 92 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 93 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 94 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 95 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 107 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 108 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 109 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 110 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 111 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 112 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 113 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 114 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 115 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 116 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 117 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 118 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 119 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 120 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 121 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 122 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 123 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 125 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 127 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 128 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 129 | 2558860280 | Kutzneria sp. 744 | Isolate | Unclassified |
| 130 | 2551306166 | Nocardia tenerifensis NBRC 101015 | Isolate | Rhizosphere |
| 131 | 2582580736 | Prauserella sp. Am3 | Isolate | Unclassified |
| 132 | 2643221692 | Nocardia sp. Root136 | Isolate | Unclassified |
| 133 | 2738543005 | Rhodococcus sp. OK519 | Isolate | Unclassified |
| 134 | 2751185734 | Saccharothrix sp. NRRL B-16314 | Isolate | Rhizosphere |
| 135 | 2795385472 | Herbihabitans rhizosphaerae DSM 101727 | Isolate | Rhizosphere |
| 136 | 2816332139 | Pseudonocardia kunmingensis DSM 45301 | Isolate | Unclassified |
| 137 | 2870721527 | Saccharothrix ecbatanensis DSM 45486 | Isolate | Rhizosphere |
| 138 | 2899359706 | Amycolatopsis anabasis EGI 650086 | Isolate | Unclassified |
| 139 | 2899370129 | Amycolatopsis alkalitolerans SYSUP0005 | Isolate | Stem Tuber |
| 140 | 2917736166 | Amycolatopsis dendrobii DR6-1 | Isolate | Unclassified |
| 141 | 2928142448 | Prescottella equi DPS 2018 | Isolate | Unclassified |
| 142 | 8003314358 | Amycolatopsis sp. MtRt-6 | Isolate | Unclassified |
| 143 | 8047710418 | Umezawaea endophytica DSM 103496 | Isolate | Unclassified |
| 144 | 8054472261 | Pseudonocardia terrae RS11V-5 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.06 |
| Metatranscriptomes | 0.58 |
| Isolates | 9.36 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.17 |
| Nodule | 0 |
| Rhizoplane | 7.02 |
| Rhizosphere | 76.02 |
| Stem | 0 |
| Stem Tuber | 0.58 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24745J21846_1001847 | 3300002073 | Bacteria | 2097 |
| 2 | Ga0070658_10100694 | 3300005327 | Bacteria | 2388 |
| 3 | Ga0070670_100169382 | 3300005331 | Bacteria | 1894 |
| 4 | Ga0070666_10093831 | 3300005335 | Bacteria | 2064 |
| 5 | Ga0070660_100072941 | 3300005339 | Bacteria | 2683 |
| 6 | Ga0070689_100161879 | 3300005340 | Bacteria | 1809 |
| 7 | Ga0070692_10031832 | 3300005345 | Bacteria | 2647 |
| 8 | Ga0070668_100007387 | 3300005347 | Bacteria | 8154 |
| 9 | Ga0070668_100010800 | 3300005347 | Bacteria | 6792 |
| 10 | Ga0070671_100023038 | 3300005355 | Bacteria | 5090 |
| 11 | Ga0070674_100056607 | 3300005356 | Bacteria | 2719 |
| 12 | Ga0070659_100000641 | 3300005366 | Bacteria | 25591 |
| 13 | Ga0070713_100135227 | 3300005436 | Bacteria | 2178 |
| 14 | Ga0070710_10000085 | 3300005437 | Bacteria | 42670 |
| 15 | Ga0070663_100001479 | 3300005455 | Bacteria | 12906 |
| 16 | Ga0070699_100002446 | 3300005518 | Bacteria | 16678 |
| 17 | Ga0070679_100106023 | 3300005530 | Bacteria | 2796 |
| 18 | Ga0070684_100047996 | 3300005535 | Bacteria | 3703 |
| 19 | Ga0068853_100031695 | 3300005539 | Bacteria | 4472 |
| 20 | Ga0070665_100003592 | 3300005548 | Bacteria | 16420 |
| 21 | Ga0068863_100001369 | 3300005841 | Bacteria | 24219 |
| 22 | Ga0068862_100177057 | 3300005844 | Bacteria | 1912 |
| 23 | Ga0081455_10000037 | 3300005937 | Bacteria | 136059 |
| 24 | Ga0081539_10000027 | 3300005985 | Bacteria | 328691 |
| 25 | Ga0070716_100029888 | 3300006173 | Bacteria | 2951 |
| 26 | Ga0075431_100030175 | 3300006847 | Bacteria | 5584 |
| 27 | Ga0099794_10001557 | 3300007265 | Bacteria | 8083 |
| 28 | Ga0105245_10084872 | 3300009098 | Bacteria | 2902 |
| 29 | Ga0105245_10162573 | 3300009098 | Bacteria | 2120 |
| 30 | Ga0105247_10073924 | 3300009101 | Bacteria | 2137 |
| 31 | Ga0157371_10008114 | 3300013102 | Bacteria | 8389 |
| 32 | Ga0157369_10000672 | 3300013105 | Bacteria | 44047 |
| 33 | Ga0157369_10163917 | 3300013105 | Bacteria | 2345 |
| 34 | Ga0157379_10010549 | 3300014968 | Bacteria | 8057 |
| 35 | Ga0213876_10024482 | 3300021384 | Bacteria | 3187 |
| 36 | Ga0213876_10058317 | 3300021384 | Bacteria | 2038 |
| 37 | Ga0224712_10000330 | 3300022467 | Bacteria | 8967 |
| 38 | Ga0207692_10002693 | 3300025898 | Bacteria | 6840 |
| 39 | Ga0207647_10021539 | 3300025904 | Bacteria | 4302 |
| 40 | Ga0207643_10012977 | 3300025908 | Bacteria | 4505 |
| 41 | Ga0207660_10066233 | 3300025917 | Bacteria | 2613 |
| 42 | Ga0207662_10049420 | 3300025918 | Bacteria | 2495 |
| 43 | Ga0207657_10045026 | 3300025919 | Bacteria | 3876 |
| 44 | Ga0207657_10092411 | 3300025919 | Bacteria | 2522 |
| 45 | Ga0207646_10078729 | 3300025922 | Bacteria | 2946 |
| 46 | Ga0207687_10123929 | 3300025927 | Bacteria | 1937 |
| 47 | Ga0207644_10039981 | 3300025931 | Bacteria | 3312 |
| 48 | Ga0207690_10000217 | 3300025932 | Bacteria | 43715 |
| 49 | Ga0207706_10047165 | 3300025933 | Bacteria | 3813 |
| 50 | Ga0207704_10083068 | 3300025938 | Bacteria | 2077 |
| 51 | Ga0207689_10029286 | 3300025942 | Bacteria | 4599 |
| 52 | Ga0207689_10066841 | 3300025942 | Bacteria | 2955 |
| 53 | Ga0207661_10097382 | 3300025944 | Bacteria | 2463 |
| 54 | Ga0207678_10001934 | 3300026067 | Bacteria | 18900 |
| 55 | Ga0207708_10046225 | 3300026075 | Bacteria | 3315 |
| 56 | Ga0207641_10003203 | 3300026088 | Bacteria | 14647 |
| 57 | Ga0207648_10109470 | 3300026089 | Bacteria | 2425 |
| 58 | Ga0207675_100163002 | 3300026118 | Bacteria | 2128 |
| 59 | Ga0207683_10046419 | 3300026121 | Bacteria | 3801 |
| 60 | Ga0268266_10010672 | 3300028379 | Bacteria | 8006 |
| 61 | Ga0268265_10072416 | 3300028380 | Bacteria | 2688 |
| 62 | Ga0268264_10167663 | 3300028381 | Bacteria | 1984 |
| 63 | Ga0307515_10038807 | 3300028794 | Bacteria | 7602 |
| 64 | Ga0307511_10000924 | 3300030521 | Bacteria | 31060 |
| 65 | Ga0307511_10094486 | 3300030521 | Bacteria | 2003 |
| 66 | Ga0316176_1083349 | 3300030732 | Bacteria | 6322 |
| 67 | Ga0314311_1204576 | 3300030733 | Bacteria | 6829 |
| 68 | Ga0307509_10072585 | 3300031507 | Bacteria | 3585 |
| 69 | Ga0307410_10027059 | 3300031852 | Bacteria | 3620 |
| 70 | Ga0307410_10082712 | 3300031852 | Bacteria | 2259 |
| 71 | Ga0307409_100022364 | 3300031995 | Bacteria | 4358 |
| 72 | Ga0307416_100032257 | 3300032002 | Bacteria | 3955 |
| 73 | Ga0307411_10014515 | 3300032005 | Bacteria | 4386 |
| 74 | Ga0373926_0012051 | 3300035083 | Bacteria | 2919 |
| 75 | Ga0373934_0000155 | 3300035086 | Bacteria | 24945 |
| 76 | Ga0373953_0010427 | 3300035117 | Bacteria | 3233 |
| 77 | Ga0373954_0005632 | 3300035118 | Bacteria | 5427 |
| 78 | Ga0373954_0008052 | 3300035118 | Bacteria | 4619 |
| 79 | Ga0373956_0001546 | 3300035119 | Bacteria | 9492 |
| 80 | Ga0373956_0006667 | 3300035119 | Bacteria | 4629 |
| 81 | Ga0373956_0016513 | 3300035119 | Bacteria | 3102 |
| 82 | Ga0373955_0049293 | 3300035172 | Bacteria | 2286 |
| 83 | Ga0373924_0006550 | 3300035410 | Bacteria | 4177 |
| 84 | Ga0373927_0004709 | 3300035695 | Bacteria | 9507 |
| 85 | Ga0373927_0052310 | 3300035695 | Bacteria | 2642 |
| 86 | Ga0373947_0069298 | 3300035725 | Bacteria | 2158 |
| 87 | Ga0373937_0064610 | 3300036401 | Bacteria | 3366 |
| 88 | Ga0373925_0033482 | 3300037068 | Bacteria | 3786 |
| 89 | Ga0395900_0052890 | 3300037418 | Bacteria | 4180 |
| 90 | Ga0395898_0084437 | 3300037466 | Bacteria | 3061 |
| 91 | Ga0395901_0005015 | 3300038443 | Bacteria | 13366 |
| 92 | Ga0436365_1716494 | 3300039437 | Bacteria | 2073 |
| 93 | Ga0436360_1038947 | 3300039438 | Bacteria | 1688 |
| 94 | Ga0436363_0940887 | 3300039450 | Bacteria | 3517 |
| 95 | Ga0436362_0779470 | 3300039453 | Bacteria | 2564 |
| 96 | Ga0466969_0000985 | 3300044656 | Bacteria | 15374 |
| 97 | Ga0466965_0002945 | 3300044683 | Bacteria | 7367 |
| 98 | Ga0466965_0007955 | 3300044683 | Bacteria | 4888 |
| 99 | Ga0466965_0055209 | 3300044683 | Bacteria | 1976 |
| 100 | Ga0466966_0017007 | 3300044684 | Bacteria | 4807 |
| 101 | Ga0466961_0006311 | 3300044693 | Bacteria | 7527 |
| 102 | Ga0466961_0097341 | 3300044693 | Bacteria | 1855 |
| 103 | Ga0466968_0015689 | 3300044735 | Bacteria | 3007 |
| 104 | Ga0466970_0003013 | 3300044765 | Bacteria | 8167 |
| 105 | Ga0466970_0025387 | 3300044765 | Bacteria | 3102 |
| 106 | Ga0466957_0034253 | 3300044842 | Bacteria | 3047 |
| 107 | Ga0466957_0063618 | 3300044842 | Bacteria | 2268 |
| 108 | Ga0466960_0001291 | 3300044901 | Bacteria | 9092 |
| 109 | Ga0466960_0006563 | 3300044901 | Bacteria | 4673 |
| 110 | Ga0466960_0015921 | 3300044901 | Bacteria | 3250 |
| 111 | Ga0466960_0016048 | 3300044901 | Bacteria | 3241 |
| 112 | Ga0466959_0010653 | 3300045049 | Bacteria | 6583 |
| 113 | Ga0466959_0066329 | 3300045049 | Bacteria | 2618 |
| 114 | Ga0466959_0083134 | 3300045049 | Bacteria | 2306 |
| 115 | Ga0451576_0165689 | 3300045051 | Bacteria | 2306 |
| 116 | Ga0466967_0001300 | 3300045976 | Bacteria | 14240 |
| 117 | Ga0466967_0013640 | 3300045976 | Bacteria | 6290 |
| 118 | Ga0466967_0143388 | 3300045976 | Bacteria | 2226 |
| 119 | Ga0495592_0049682 | 3300046454 | Bacteria | 3117 |
| 120 | Ga0495651_0087605 | 3300046462 | Bacteria | 2341 |
| 121 | Ga0495653_0041512 | 3300046463 | Bacteria | 3590 |
| 122 | Ga0495608_0012150 | 3300046511 | Bacteria | 5984 |
| 123 | Ga0495587_0006735 | 3300046536 | Bacteria | 7481 |
| 124 | Ga0495667_0006836 | 3300046559 | Bacteria | 7742 |
| 125 | Ga0495657_0062556 | 3300046675 | Bacteria | 2458 |
| 126 | Ga0495599_0020365 | 3300046678 | Bacteria | 4131 |
| 127 | Ga0495600_0056346 | 3300046809 | Bacteria | 2568 |
| 128 | Ga0495604_0101823 | 3300047317 | Bacteria | 2109 |
| 129 | Ga0495675_0005566 | 3300047444 | Bacteria | 7686 |
| 130 | Ga0496100_0000282 | 3300048903 | Bacteria | 25777 |
| 131 | Ga0496101_0026074 | 3300048904 | Bacteria | 4061 |
| 132 | Ga0496102_0000155 | 3300048905 | Bacteria | 92990 |
| 133 | Ga0496102_0097412 | 3300048905 | Bacteria | 2728 |
| 134 | Ga0496103_0000506 | 3300048906 | Bacteria | 32166 |
| 135 | Ga0496104_0018211 | 3300048907 | Bacteria | 6406 |
| 136 | Ga0496105_0010611 | 3300048908 | Bacteria | 7247 |
| 137 | Ga0496106_0116422 | 3300048909 | Bacteria | 2085 |
| 138 | Ga0496109_0176956 | 3300048912 | Bacteria | 2003 |
| 139 | Ga0496110_0011013 | 3300048913 | Bacteria | 7380 |
| 140 | Ga0496110_0030960 | 3300048913 | Bacteria | 4615 |
| 141 | Ga0496110_0046647 | 3300048913 | Bacteria | 3791 |
| 142 | Ga0496116_0000539 | 3300048919 | Bacteria | 50894 |
| 143 | Ga0496117_0000747 | 3300048920 | Bacteria | 51180 |
| 144 | Ga0496118_0000265 | 3300048921 | Bacteria | 91869 |
| 145 | Ga0496119_0001023 | 3300048922 | Bacteria | 35834 |
| 146 | Ga0496120_0001169 | 3300048923 | Bacteria | 33549 |
| 147 | Ga0496121_0004201 | 3300048924 | Bacteria | 19665 |
| 148 | Ga0496125_0015137 | 3300048928 | Bacteria | 7475 |
| 149 | Ga0496126_0000381 | 3300048929 | Bacteria | 91810 |
| 150 | Ga0501047_0135322 | 3300049581 | Bacteria | 2345 |
| 151 | nmdc:mga06r32_3567_c1 | 3300050510 | Bacteria | 8437 |
| 152 | Ga0495595_0001434 | 3300053084 | Bacteria | 9287 |
| 153 | Ga0500559_0001719 | 3300053136 | Bacteria | 12006 |
| 154 | Ga0500577_0003553 | 3300053142 | Bacteria | 4054 |
| 155 | Ga0530510_0069959 | 3300061734 | Bacteria | 2547 |
| 156 | 2559427535 | 2558860280 | Bacteria | 11429938 |
| 157 | 2552105307 | 2551306166 | Bacteria | 9731570 |
| 158 | 2583149169 | 2582580736 | Bacteria | 5325865 |
| 159 | 2644515737 | 2643221692 | Bacteria | 7282860 |
| 160 | 2739204792 | 2738543005 | Bacteria | 5278128 |
| 161 | 2753075835 | 2751185734 | Bacteria | 8863695 |
| 162 | 2795793752 | 2795385472 | Bacteria | 6627535 |
| 163 | 2816505950 | 2816332139 | Bacteria | 9138787 |
| 164 | 2870728599 | 2870721527 | Bacteria | 9689237 |
| 165 | 2899366128 | 2899359706 | Bacteria | 10940472 |
| 166 | 2899374717 | 2899370129 | Bacteria | 6781179 |
| 167 | 2917739036 | 2917736166 | Bacteria | 9690793 |
| 168 | 2928147038 | 2928142448 | Bacteria | 5288925 |
| 169 | 8003319878 | 8003314358 | Bacteria | 10575343 |
| 170 | 8047714095 | 8047710418 | Bacteria | 11023148 |
| 171 | 8054474097 | 8054472261 | Bacteria | 7464355 |
| 172 | JGI24745J21846_1001847 | |||
| 173 | Ga0070658_10100694 | |||
| 174 | Ga0070670_100169382 | |||
| 175 | Ga0070666_10093831 | |||
| 176 | Ga0070660_100072941 | |||
| 177 | Ga0070689_100161879 | |||
| 178 | Ga0070692_10031832 | |||
| 179 | Ga0070668_100007387 | |||
| 180 | Ga0070668_100010800 | |||
| 181 | Ga0070671_100023038 | |||
| 182 | Ga0070674_100056607 | |||
| 183 | Ga0070659_100000641 | |||
| 184 | Ga0070713_100135227 | |||
| 185 | Ga0070710_10000085 | |||
| 186 | Ga0070663_100001479 | |||
| 187 | Ga0070699_100002446 | |||
| 188 | Ga0070679_100106023 | |||
| 189 | Ga0070684_100047996 | |||
| 190 | Ga0068853_100031695 | |||
| 191 | Ga0070665_100003592 | |||
| 192 | Ga0068863_100001369 | |||
| 193 | Ga0068862_100177057 | |||
| 194 | Ga0081455_10000037 | |||
| 195 | Ga0081539_10000027 | |||
| 196 | Ga0070716_100029888 | |||
| 197 | Ga0075431_100030175 | |||
| 198 | Ga0099794_10001557 | |||
| 199 | Ga0105245_10084872 | |||
| 200 | Ga0105245_10162573 | |||
| 201 | Ga0105247_10073924 | |||
| 202 | Ga0157371_10008114 | |||
| 203 | Ga0157369_10000672 | |||
| 204 | Ga0157369_10163917 | |||
| 205 | Ga0157379_10010549 | |||
| 206 | Ga0213876_10024482 | |||
| 207 | Ga0213876_10058317 | |||
| 208 | Ga0224712_10000330 | |||
| 209 | Ga0207692_10002693 | |||
| 210 | Ga0207647_10021539 | |||
| 211 | Ga0207643_10012977 | |||
| 212 | Ga0207660_10066233 | |||
| 213 | Ga0207662_10049420 | |||
| 214 | Ga0207657_10045026 | |||
| 215 | Ga0207657_10092411 | |||
| 216 | Ga0207646_10078729 | |||
| 217 | Ga0207687_10123929 | |||
| 218 | Ga0207644_10039981 | |||
| 219 | Ga0207690_10000217 | |||
| 220 | Ga0207706_10047165 | |||
| 221 | Ga0207704_10083068 | |||
| 222 | Ga0207689_10029286 | |||
| 223 | Ga0207689_10066841 | |||
| 224 | Ga0207661_10097382 | |||
| 225 | Ga0207678_10001934 | |||
| 226 | Ga0207708_10046225 | |||
| 227 | Ga0207641_10003203 | |||
| 228 | Ga0207648_10109470 | |||
| 229 | Ga0207675_100163002 | |||
| 230 | Ga0207683_10046419 | |||
| 231 | Ga0268266_10010672 | |||
| 232 | Ga0268265_10072416 | |||
| 233 | Ga0268264_10167663 | |||
| 234 | Ga0307515_10038807 | |||
| 235 | Ga0307511_10000924 | |||
| 236 | Ga0307511_10094486 | |||
| 237 | Ga0316176_1083349 | |||
| 238 | Ga0314311_1204576 | |||
| 239 | Ga0307509_10072585 | |||
| 240 | Ga0307410_10027059 | |||
| 241 | Ga0307410_10082712 | |||
| 242 | Ga0307409_100022364 | |||
| 243 | Ga0307416_100032257 | |||
| 244 | Ga0307411_10014515 | |||
| 245 | Ga0373926_0012051 | |||
| 246 | Ga0373934_0000155 | |||
| 247 | Ga0373953_0010427 | |||
| 248 | Ga0373954_0005632 | |||
| 249 | Ga0373954_0008052 | |||
| 250 | Ga0373956_0001546 | |||
| 251 | Ga0373956_0006667 | |||
| 252 | Ga0373956_0016513 | |||
| 253 | Ga0373955_0049293 | |||
| 254 | Ga0373924_0006550 | |||
| 255 | Ga0373927_0004709 | |||
| 256 | Ga0373927_0052310 | |||
| 257 | Ga0373947_0069298 | |||
| 258 | Ga0373937_0064610 | |||
| 259 | Ga0373925_0033482 | |||
| 260 | Ga0395900_0052890 | |||
| 261 | Ga0395898_0084437 | |||
| 262 | Ga0395901_0005015 | |||
| 263 | Ga0436365_1716494 | |||
| 264 | Ga0436360_1038947 | |||
| 265 | Ga0436363_0940887 | |||
| 266 | Ga0436362_0779470 | |||
| 267 | Ga0466969_0000985 | |||
| 268 | Ga0466965_0002945 | |||
| 269 | Ga0466965_0007955 | |||
| 270 | Ga0466965_0055209 | |||
| 271 | Ga0466966_0017007 | |||
| 272 | Ga0466961_0006311 | |||
| 273 | Ga0466961_0097341 | |||
| 274 | Ga0466968_0015689 | |||
| 275 | Ga0466970_0003013 | |||
| 276 | Ga0466970_0025387 | |||
| 277 | Ga0466957_0034253 | |||
| 278 | Ga0466957_0063618 | |||
| 279 | Ga0466960_0001291 | |||
| 280 | Ga0466960_0006563 | |||
| 281 | Ga0466960_0015921 | |||
| 282 | Ga0466960_0016048 | |||
| 283 | Ga0466959_0010653 | |||
| 284 | Ga0466959_0066329 | |||
| 285 | Ga0466959_0083134 | |||
| 286 | Ga0451576_0165689 | |||
| 287 | Ga0466967_0001300 | |||
| 288 | Ga0466967_0013640 | |||
| 289 | Ga0466967_0143388 | |||
| 290 | Ga0495592_0049682 | |||
| 291 | Ga0495651_0087605 | |||
| 292 | Ga0495653_0041512 | |||
| 293 | Ga0495608_0012150 | |||
| 294 | Ga0495587_0006735 | |||
| 295 | Ga0495667_0006836 | |||
| 296 | Ga0495657_0062556 | |||
| 297 | Ga0495599_0020365 | |||
| 298 | Ga0495600_0056346 | |||
| 299 | Ga0495604_0101823 | |||
| 300 | Ga0495675_0005566 | |||
| 301 | Ga0496100_0000282 | |||
| 302 | Ga0496101_0026074 | |||
| 303 | Ga0496102_0000155 | |||
| 304 | Ga0496102_0097412 | |||
| 305 | Ga0496103_0000506 | |||
| 306 | Ga0496104_0018211 | |||
| 307 | Ga0496105_0010611 | |||
| 308 | Ga0496106_0116422 | |||
| 309 | Ga0496109_0176956 | |||
| 310 | Ga0496110_0011013 | |||
| 311 | Ga0496110_0030960 | |||
| 312 | Ga0496110_0046647 | |||
| 313 | Ga0496116_0000539 | |||
| 314 | Ga0496117_0000747 | |||
| 315 | Ga0496118_0000265 | |||
| 316 | Ga0496119_0001023 | |||
| 317 | Ga0496120_0001169 | |||
| 318 | Ga0496121_0004201 | |||
| 319 | Ga0496125_0015137 | |||
| 320 | Ga0496126_0000381 | |||
| 321 | Ga0501047_0135322 | |||
| 322 | nmdc:mga06r32_3567_c1 | |||
| 323 | Ga0495595_0001434 | |||
| 324 | Ga0500559_0001719 | |||
| 325 | Ga0500577_0003553 | |||
| 326 | Ga0530510_0069959 | |||
| 327 | 2559427535 | |||
| 328 | 2552105307 | |||
| 329 | 2583149169 | |||
| 330 | 2644515737 | |||
| 331 | 2739204792 | |||
| 332 | 2753075835 | |||
| 333 | 2795793752 | |||
| 334 | 2816505950 | |||
| 335 | 2870728599 | |||
| 336 | 2899366128 | |||
| 337 | 2899374717 | |||
| 338 | 2917739036 | |||
| 339 | 2928147038 | |||
| 340 | 8003319878 | |||
| 341 | 8047714095 | |||
| 342 | 8054474097 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1li7-assembly2.cif.gz_B | crystal structure of cysteinyl-trna synthetase with cysteine substrate bound | 0.9487 | 3 | 391 |
| 1li7-assembly1.cif.gz_A | crystal structure of cysteinyl-trna synthetase with cysteine substrate bound | 0.9354 | 3 | 391 |
| 3tqo-assembly1.cif.gz_A | structure of the cysteinyl-trna synthetase (cyss) from coxiella burnetii. | 0.9332 | 1 | 393 |
| 8qhp-assembly1.cif.gz_B | cysteine trna ligase homodimer | 0.9315 | 1 | 390 |
| 1li7-assembly2.cif.gz_B | crystal structure of cysteinyl-trna synthetase with cysteine substrate bound | 0.9215 | 3 | 391 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WFW1_1_304_3.40.50.620 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.9813 | 1 | 300 | 3.40.50.620 |
| af_P9WFW1_1_304_3.40.50.620 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.9653 | 1 | 300 | 3.40.50.620 |
| af_C0PHQ1_15_336_3.40.50.620 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.9633 | 2 | 302 | 3.40.50.620 |
| 1li7A01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.9493 | 18 | 302 | 3.40.50.620 |
| 1li7A01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.9459 | 18 | 302 | 3.40.50.620 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-X8C7K5-F1-model_v4 | deleted | 0.9937 | 1 | 108 |
|
| AF-A0A554J927-F1-model_v4 | Cysteinyl-tRNA synthetase | 0.9916 | 3 | 133 |
GO:0004817
GO:0005524 GO:0005737 GO:0006423 |
| AF-A0A835RCV5-F1-model_v4 | tRNA synthetases class I catalytic domain-containing protein | 0.9902 | 1 | 127 |
GO:0004817
GO:0005524 GO:0005737 GO:0006423 |
| AF-A0A0T5Z8J2-F1-model_v4 | tRNA synthetases class I (C) catalytic domain-containing protein | 0.9885 | 3 | 109 |
GO:0004817
GO:0005524 GO:0005829 GO:0006423 |
| AF-J1F6D8-F1-model_v4 | Cysteinyl-tRNA synthetase | 0.9882 | 3 | 131 |
GO:0004817
GO:0005524 GO:0005829 GO:0006423 |