F259374

General Info

Members Datasets Scaffolds Average Seq Length
171 115 342 545

Family's Representative Sequence

Representative Sequence 3300046533|Ga0495640_0023180|Ga0495640_0023180_1145_2881
Length 578
Sequence LNAIIVPASTNGRRGMSVELHFNHHQTRVAPGSSLFEYAESLGIAVPTSCRKQGKCKECVIEVTEGAECLSERDPAERHLKGDFRLSCCCRLVKDSGTVRCHTMRRGELRIQRDALHLLVRSAGWKPDPAVSREGERILLDGEEIARGTGPLHGLALDLGTTTVVLRLLNLETGEVLADDSFENPQRFGGSDVMARIHYDTEDGTRVLQRTLIGYLNRAIEQFPVDPTSIYELVVAGNSTMRDLLFGLSVYSIGQSPYRSITELEMAEGKRTTTSLSQPARRLGLRLHPKARVYGLPIISGHVGADAAACMLAVDLAHEERLVAIMDIGTNTELIVGNKDRIVAASCPAGPAFEGGKITCGMPGLPGGIEHVSFGPDGALSIKVIGDGPAEGICGSGLVDMLGELFRTERMNGLGRLQDGENRIVLDSRGDEPIYFTEADINELAQAKGANAAGLRVVFEDYGIKPEALEVFYLAGGFGRYLDVQSAKRIGLVPNLPDCKIRQVGNASIEGACIALLSKTRRREVEDLVKHVTHCRLEAHPRFFDFFVEGCQFGPFDSSASECARLGHSKPESEGRLC

Samples

Sample ID Description Type Environment
1 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
18 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
44 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
45 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
46 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
47 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
48 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
51 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
52 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
53 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
54 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
55 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
56 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
57 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
58 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
59 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
62 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
63 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
64 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
65 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
66 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
67 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
68 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
69 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
70 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
71 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
72 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
73 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
74 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
78 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
79 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
80 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
81 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
82 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
83 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
84 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
85 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
86 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
87 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
88 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
89 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
90 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
91 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
92 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
93 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
94 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
95 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
96 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
100 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
101 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
102 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
107 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
108 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
109 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
110 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
111 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
112 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
113 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
114 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
115 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.42
Metatranscriptomes 0
Isolates 0.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.17
Nodule 0
Rhizoplane 2.92
Rhizosphere 94.74
Stem 0
Stem Tuber 0
Unclassified 8.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495640_0023180 3300046533 Unclassified 4531
2 rootH1_10188759 3300003323 Bacteria 4149
3 Ga0065712_10000695 3300005290 Bacteria 9164
4 Ga0065715_10004449 3300005293 Bacteria 7659
5 Ga0065715_10100231 3300005293 Bacteria 3325
6 Ga0065715_10105085 3300005293 Bacteria 2914
7 Ga0070683_100005354 3300005329 Bacteria 10700
8 Ga0070683_100097752 3300005329 Bacteria 2762
9 Ga0070670_100001152 3300005331 Bacteria 20970
10 Ga0070689_100036457 3300005340 Bacteria 3762
11 Ga0070675_100063795 3300005354 Bacteria 3046
12 Ga0070713_100008108 3300005436 Bacteria 7430
13 Ga0070681_10092806 3300005458 Bacteria 2968
14 Ga0068867_100073803 3300005459 Bacteria 2555
15 Ga0070679_100000725 3300005530 Bacteria 28466
16 Ga0070679_100018033 3300005530 Bacteria 6842
17 Ga0070684_100000515 3300005535 Bacteria 26549
18 Ga0068855_100152909 3300005563 Bacteria 2623
19 Ga0070664_100001660 3300005564 Bacteria 17800
20 Ga0068857_100020954 3300005577 Bacteria 5751
21 Ga0068862_100062662 3300005844 Bacteria 3198
22 Ga0075368_10016572 3300006042 Bacteria 2747
23 Ga0070712_100089273 3300006175 Bacteria 2254
24 Ga0075367_10014418 3300006178 Bacteria 4279
25 Ga0075428_100111787 3300006844 Bacteria 2976
26 Ga0075430_100036513 3300006846 Bacteria 4166
27 Ga0075431_100037612 3300006847 Bacteria 4984
28 Ga0075435_100073929 3300007076 Bacteria 2787
29 Ga0111539_10002888 3300009094 Bacteria 22812
30 Ga0111539_10046037 3300009094 Bacteria 5220
31 Ga0114129_10001828 3300009147 Bacteria 28970
32 Ga0105248_10008845 3300009177 Bacteria 11063
33 Ga0105248_10195292 3300009177 Bacteria 2280
34 Ga0105249_10001093 3300009553 Bacteria 24114
35 Ga0105249_10074980 3300009553 Bacteria 3133
36 Ga0157370_10005724 3300013104 Bacteria 13896
37 Ga0157370_10036169 3300013104 Bacteria 4794
38 Ga0157370_10103848 3300013104 Bacteria 2660
39 Ga0157369_10017268 3300013105 Bacteria 8111
40 Ga0157375_10175504 3300013308 Bacteria 2292
41 Ga0163163_10005247 3300014325 Bacteria 11173
42 Ga0207680_10044343 3300025903 Bacteria 2615
43 Ga0207652_10002846 3300025921 Bacteria 14495
44 Ga0207652_10011952 3300025921 Bacteria 7006
45 Ga0207694_10010597 3300025924 Bacteria 6959
46 Ga0207694_10045956 3300025924 Bacteria 3374
47 Ga0207650_10014056 3300025925 Bacteria 5558
48 Ga0207711_10037819 3300025941 Bacteria 4102
49 Ga0207661_10039035 3300025944 Bacteria 3725
50 Ga0207661_10119288 3300025944 Bacteria 2243
51 Ga0207679_10005441 3300025945 Bacteria 7978
52 Ga0207667_10122782 3300025949 Bacteria 2676
53 Ga0207648_10115774 3300026089 Bacteria 2356
54 Ga0207674_10029649 3300026116 Bacteria 5759
55 Ga0265337_1000736 3300028556 Bacteria 17247
56 Ga0265337_1001143 3300028556 Bacteria 13556
57 Ga0265319_1026109 3300028563 Bacteria 2084
58 Ga0265319_1029643 3300028563 Bacteria 1920
59 Ga0265334_10001256 3300028573 Bacteria 12385
60 Ga0265334_10012968 3300028573 Bacteria 3497
61 Ga0265334_10013478 3300028573 Bacteria 3421
62 Ga0265318_10006005 3300028577 Bacteria 5634
63 Ga0265322_10003187 3300028654 Bacteria 4983
64 Ga0265336_10000966 3300028666 Bacteria 14351
65 Ga0265338_10000132 3300028800 Bacteria 137378
66 Ga0265338_10000494 3300028800 Bacteria 70344
67 Ga0265338_10001599 3300028800 Bacteria 36351
68 Ga0265338_10001670 3300028800 Bacteria 35304
69 Ga0265338_10008861 3300028800 Bacteria 12131
70 Ga0265338_10009065 3300028800 Bacteria 11968
71 Ga0265338_10020498 3300028800 Bacteria 6951
72 Ga0265338_10021822 3300028800 Bacteria 6656
73 Ga0265338_10031526 3300028800 Bacteria 5195
74 Ga0265338_10039116 3300028800 Bacteria 4481
75 Ga0265338_10047070 3300028800 Bacteria 3943
76 Ga0265330_10000643 3300031235 Bacteria 22456
77 Ga0265332_10027761 3300031238 Unclassified 2479
78 Ga0265320_10000892 3300031240 Bacteria 22456
79 Ga0265320_10005140 3300031240 Bacteria 8445
80 Ga0265320_10005800 3300031240 Bacteria 7870
81 Ga0265325_10000415 3300031241 Bacteria 30438
82 Ga0265325_10008068 3300031241 Bacteria 6243
83 Ga0265325_10016917 3300031241 Unclassified 4066
84 Ga0265325_10038039 3300031241 Unclassified 2541
85 Ga0265340_10018438 3300031247 Unclassified 3600
86 Ga0265340_10021703 3300031247 Bacteria 3291
87 Ga0265339_10005985 3300031249 Bacteria 8037
88 Ga0265339_10010853 3300031249 Bacteria 5634
89 Ga0265339_10020389 3300031249 Bacteria 3874
90 Ga0265339_10033017 3300031249 Bacteria 2918
91 Ga0265331_10001805 3300031250 Bacteria 15207
92 Ga0265316_10031016 3300031344 Bacteria 4375
93 Ga0265316_10046828 3300031344 Bacteria 3423
94 Ga0265316_10055215 3300031344 Bacteria 3107
95 Ga0307408_100022013 3300031548 Bacteria 4324
96 Ga0265313_10001128 3300031595 Bacteria 25524
97 Ga0265313_10001245 3300031595 Bacteria 24277
98 Ga0265313_10001781 3300031595 Bacteria 19674
99 Ga0265313_10016861 3300031595 Bacteria 4182
100 Ga0265314_10003847 3300031711 Bacteria 14311
101 Ga0265314_10004319 3300031711 Bacteria 13262
102 Ga0265314_10019497 3300031711 Bacteria 5255
103 Ga0265342_10000156 3300031712 Bacteria 77615
104 Ga0265342_10003085 3300031712 Bacteria 13920
105 Ga0265342_10008929 3300031712 Bacteria 7121
106 Ga0265342_10023252 3300031712 Bacteria 3927
107 Ga0307410_10120202 3300031852 Bacteria 1915
108 Ga0307409_100021414 3300031995 Bacteria 4432
109 Ga0307416_100154658 3300032002 Bacteria 2109
110 Ga0307411_10114735 3300032005 Bacteria 1936
111 Ga0373954_0006212 3300035118 Bacteria 5207
112 Ga0373956_0039109 3300035119 Unclassified 2101
113 Ga0373937_0017831 3300036401 Bacteria 6334
114 Ga0316584_0048080 3300036712 Bacteria 3188
115 Ga0451577_0020317 3300042876 Bacteria 6096
116 Ga0451577_0021108 3300042876 Bacteria 5965
117 Ga0451577_0067153 3300042876 Bacteria 3198
118 Ga0453683_0002185 3300044673 Bacteria 15562
119 Ga0466966_0058355 3300044684 Bacteria 2439
120 Ga0466961_0019065 3300044693 Bacteria 4414
121 Ga0453684_0014599 3300044712 Bacteria 12541
122 Ga0453684_0034159 3300044712 Bacteria 7067
123 Ga0451576_0016231 3300045051 Bacteria 8225
124 Ga0466967_0009985 3300045976 Bacteria 7089
125 Ga0495592_0041828 3300046454 Unclassified 3434
126 Ga0495629_0029174 3300046459 Unclassified 3914
127 Ga0495641_0015883 3300046461 Bacteria 3991
128 Ga0495664_0045444 3300046477 Bacteria 2604
129 Ga0495618_0001794 3300046514 Bacteria 14239
130 Ga0495628_0018823 3300046516 Bacteria 5715
131 Ga0495630_0014993 3300046517 Bacteria 5654
132 Ga0495630_0033151 3300046517 Unclassified 3851
133 Ga0495666_0022634 3300046526 Unclassified 3112
134 Ga0495652_0022451 3300046529 Bacteria 5599
135 Ga0495586_0000499 3300046535 Bacteria 23147
136 Ga0495586_0002640 3300046535 Bacteria 9698
137 Ga0495586_0021440 3300046535 Viruses 3444
138 Ga0495645_0055506 3300046543 Bacteria 2876
139 Ga0495622_0012052 3300046557 Unclassified 3997
140 Ga0495667_0127185 3300046559 Unclassified 1644
141 Ga0495634_0001667 3300046642 Bacteria 19346
142 Ga0495634_0004477 3300046642 Bacteria 10962
143 Ga0495658_0014228 3300046683 Bacteria 4061
144 Ga0495613_0000896 3300046689 Bacteria 22904
145 Ga0495674_0027182 3300047319 Bacteria 5230
146 Ga0495676_0043012 3300047321 Unclassified 3701
147 Ga0495680_0003875 3300047322 Bacteria 14473
148 Ga0495680_0020792 3300047322 Bacteria 5510
149 Ga0495684_0029058 3300047471 Bacteria 4242
150 Ga0495684_0042557 3300047471 Unclassified 3479
151 Ga0496104_0004106 3300048907 Bacteria 12639
152 Ga0496105_0006312 3300048908 Bacteria 9107
153 Ga0496108_0022291 3300048911 Bacteria 5206
154 Ga0496109_0003511 3300048912 Bacteria 13099
155 Ga0496110_0012863 3300048913 Bacteria 6897
156 Ga0501032_0048494 3300049569 Bacteria 2867
157 Ga0501034_0133877 3300049571 Bacteria 2460
158 Ga0501038_0053070 3300049574 Bacteria 3492
159 Ga0501047_0085665 3300049581 Bacteria 3027
160 Ga0501074_0096353 3300049590 Bacteria 2118
161 Ga0501080_0123690 3300049742 Bacteria 2396
162 Ga0501044_0282823 3300049823 Bacteria 1592
163 nmdc:mga05p37_5661_c1 3300050507 Bacteria 14692
164 nmdc:mga0qj67_34893_c1 3300050509 Bacteria 3931
165 nmdc:mga06r32_33342_c1 3300050510 Bacteria 4850
166 nmdc:mga08y16_32351_c1 3300050511 Bacteria 5499
167 nmdc:mga08y16_35552_c1 3300050511 Bacteria 5231
168 nmdc:mga08y16_6847_c1 3300050511 Bacteria 11950
169 Ga0495619_0053949 3300053085 Bacteria 2660
170 Ga0501082_0159577 3300060353 Bacteria 1959
171 2788434578 2786546940 Bacteria 6396474
172 Ga0495640_0023180
173 rootH1_10188759
174 Ga0065712_10000695
175 Ga0065715_10004449
176 Ga0065715_10100231
177 Ga0065715_10105085
178 Ga0070683_100005354
179 Ga0070683_100097752
180 Ga0070670_100001152
181 Ga0070689_100036457
182 Ga0070675_100063795
183 Ga0070713_100008108
184 Ga0070681_10092806
185 Ga0068867_100073803
186 Ga0070679_100000725
187 Ga0070679_100018033
188 Ga0070684_100000515
189 Ga0068855_100152909
190 Ga0070664_100001660
191 Ga0068857_100020954
192 Ga0068862_100062662
193 Ga0075368_10016572
194 Ga0070712_100089273
195 Ga0075367_10014418
196 Ga0075428_100111787
197 Ga0075430_100036513
198 Ga0075431_100037612
199 Ga0075435_100073929
200 Ga0111539_10002888
201 Ga0111539_10046037
202 Ga0114129_10001828
203 Ga0105248_10008845
204 Ga0105248_10195292
205 Ga0105249_10001093
206 Ga0105249_10074980
207 Ga0157370_10005724
208 Ga0157370_10036169
209 Ga0157370_10103848
210 Ga0157369_10017268
211 Ga0157375_10175504
212 Ga0163163_10005247
213 Ga0207680_10044343
214 Ga0207652_10002846
215 Ga0207652_10011952
216 Ga0207694_10010597
217 Ga0207694_10045956
218 Ga0207650_10014056
219 Ga0207711_10037819
220 Ga0207661_10039035
221 Ga0207661_10119288
222 Ga0207679_10005441
223 Ga0207667_10122782
224 Ga0207648_10115774
225 Ga0207674_10029649
226 Ga0265337_1000736
227 Ga0265337_1001143
228 Ga0265319_1026109
229 Ga0265319_1029643
230 Ga0265334_10001256
231 Ga0265334_10012968
232 Ga0265334_10013478
233 Ga0265318_10006005
234 Ga0265322_10003187
235 Ga0265336_10000966
236 Ga0265338_10000132
237 Ga0265338_10000494
238 Ga0265338_10001599
239 Ga0265338_10001670
240 Ga0265338_10008861
241 Ga0265338_10009065
242 Ga0265338_10020498
243 Ga0265338_10021822
244 Ga0265338_10031526
245 Ga0265338_10039116
246 Ga0265338_10047070
247 Ga0265330_10000643
248 Ga0265332_10027761
249 Ga0265320_10000892
250 Ga0265320_10005140
251 Ga0265320_10005800
252 Ga0265325_10000415
253 Ga0265325_10008068
254 Ga0265325_10016917
255 Ga0265325_10038039
256 Ga0265340_10018438
257 Ga0265340_10021703
258 Ga0265339_10005985
259 Ga0265339_10010853
260 Ga0265339_10020389
261 Ga0265339_10033017
262 Ga0265331_10001805
263 Ga0265316_10031016
264 Ga0265316_10046828
265 Ga0265316_10055215
266 Ga0307408_100022013
267 Ga0265313_10001128
268 Ga0265313_10001245
269 Ga0265313_10001781
270 Ga0265313_10016861
271 Ga0265314_10003847
272 Ga0265314_10004319
273 Ga0265314_10019497
274 Ga0265342_10000156
275 Ga0265342_10003085
276 Ga0265342_10008929
277 Ga0265342_10023252
278 Ga0307410_10120202
279 Ga0307409_100021414
280 Ga0307416_100154658
281 Ga0307411_10114735
282 Ga0373954_0006212
283 Ga0373956_0039109
284 Ga0373937_0017831
285 Ga0316584_0048080
286 Ga0451577_0020317
287 Ga0451577_0021108
288 Ga0451577_0067153
289 Ga0453683_0002185
290 Ga0466966_0058355
291 Ga0466961_0019065
292 Ga0453684_0014599
293 Ga0453684_0034159
294 Ga0451576_0016231
295 Ga0466967_0009985
296 Ga0495592_0041828
297 Ga0495629_0029174
298 Ga0495641_0015883
299 Ga0495664_0045444
300 Ga0495618_0001794
301 Ga0495628_0018823
302 Ga0495630_0014993
303 Ga0495630_0033151
304 Ga0495666_0022634
305 Ga0495652_0022451
306 Ga0495586_0000499
307 Ga0495586_0002640
308 Ga0495586_0021440
309 Ga0495645_0055506
310 Ga0495622_0012052
311 Ga0495667_0127185
312 Ga0495634_0001667
313 Ga0495634_0004477
314 Ga0495658_0014228
315 Ga0495613_0000896
316 Ga0495674_0027182
317 Ga0495676_0043012
318 Ga0495680_0003875
319 Ga0495680_0020792
320 Ga0495684_0029058
321 Ga0495684_0042557
322 Ga0496104_0004106
323 Ga0496105_0006312
324 Ga0496108_0022291
325 Ga0496109_0003511
326 Ga0496110_0012863
327 Ga0501032_0048494
328 Ga0501034_0133877
329 Ga0501038_0053070
330 Ga0501047_0085665
331 Ga0501074_0096353
332 Ga0501080_0123690
333 Ga0501044_0282823
334 nmdc:mga05p37_5661_c1
335 nmdc:mga0qj67_34893_c1
336 nmdc:mga06r32_33342_c1
337 nmdc:mga08y16_32351_c1
338 nmdc:mga08y16_35552_c1
339 nmdc:mga08y16_6847_c1
340 Ga0495619_0053949
341 Ga0501082_0159577
342 2788434578

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14574

RACo_C_ter

C-terminal domain of RACo the ASKHA domain

321

562

0.95

PF17651

Raco_middle

RACo middle region

153

319

0.9

PF00111

Fer2

2Fe-2S iron-sulfur cluster binding domain

20

93

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vk9-assembly1.cif.gz_A crystal structure of xcas9 p411t 0.9209 135 155
4c1n-assembly4.cif.gz_X corrinoid protein reactivation complex with activator 0.8745 122 539
5xta-assembly1.cif.gz_D crystal structure of lpg1832, a virk family protein from legionella pneumophila 0.8633 148 168
4cmq-assembly2.cif.gz_B crystal structure of mn-bound s.pyogenes cas9 0.8575 138 157
4q6z-assembly1.cif.gz_A lpob c-terminal domain from escherichia coli 0.8388 148 168
ID Description Score Start End Superfamily
af_A0A0P0XDX2_25_77_3.10.20.370 Alpha Beta;Roll;Ubiquitin-like (UB roll); 0.9481 138 168 3.10.20.370
af_K7KMF1_95_188_3.40.630.30 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.9283 138 166 3.40.630.30
af_A0A1D6EVV4_90_195_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.9045 14 80 3.10.20.30
af_A0A0R0GLS0_46_147_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.8765 5 88 3.10.20.30
af_P75863_271_368_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.8709 1 86 3.10.20.30
ID Description Score Start End GO Terms
AF-A0A7W0LGW3-F1-model_v4 DUF4445 domain-containing protein 0.9778 243 547
AF-A0A1V5ZHR3-F1-model_v4 RACo C-terminal domain-containing protein 0.9751 310 540
AF-A0A356PG25-F1-model_v4 Ferredoxin 0.9712 318 539
AF-A0A117LL36-F1-model_v4 2Fe-2S iron-sulfur cluster binding domain protein 0.9654 347 540
AF-A0A7Y8LJP5-F1-model_v4 DUF4445 domain-containing protein 0.965 1 543 GO:0051536

Map