F257776

General Info

Members Datasets Scaffolds Average Seq Length
170 142 340 405

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2954673503|2954678156
Length 461
Sequence DLVRWTPRKTPLLTDSGENGGYGVDAGELTAAADDGGKAHMAPYESDDSATAADAEELRAARRRKAARYVVPATVVGVAAATIGLVPALADSGDPDLPKISAQELIEKIAASDVQQLSGTVKITTDLGLPDLGGLESSLGSAAGPSGSGDGSSADPSTKLTELASGTHTLRVAADGEDKQKISLLENAAEYSLIHNGKDVWGYDSKSNSVFHTTASESHGKQKEELPATPKDLAEEALKAADKTTSVTVEGTAQVAGRDAYRLVIKPKDDGSTVGQITVAVDSATGLPLKFTLTPASGGAAVVDAGFTQVSFAKPAASTFDFTPPKGAKVEEGDAGKAPEHSEGLGRGSAGEFGKGPAGEFGKGPAGEFGKGGPEGLNVIGDGWDSIATFDTGGQGVPSGSEVGGDVGGFLNSLGDKVSGKFGEGTVFKTRLINALITDDGKVYVGAVTKDALVKAADAGK

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
6 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
7 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
8 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
9 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
10 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
11 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
12 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
13 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
14 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
15 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
17 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
18 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
19 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
20 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
21 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
22 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
23 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
24 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
25 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
26 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
27 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
28 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
29 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
30 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
31 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
32 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
33 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
34 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
35 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
36 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
37 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
38 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
39 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
40 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
41 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
42 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
43 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
44 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
45 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
46 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
47 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
48 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
49 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
50 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
51 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
52 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
53 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
54 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
55 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
56 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
57 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
58 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
59 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
60 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
61 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
73 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
74 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
75 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
78 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
79 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
80 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
81 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
82 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
83 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
84 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
85 2643221578 Streptomyces sp. Root63 Isolate Unclassified
86 2643221647 Streptomyces sp. Root369 Isolate Unclassified
87 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
88 2643221714 Streptomyces sp. Root264 Isolate Unclassified
89 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
90 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
91 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
92 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
93 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
94 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
95 2808606448 Streptomyces sp. 193411 Isolate Unclassified
96 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
97 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
98 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
99 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
100 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
101 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
102 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
103 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
104 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
105 2862574272 Streptomyces sp. AcE210 Isolate Nodule
106 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
107 2867428634 Streptomyces sp. RP5T Isolate Unclassified
108 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
109 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
110 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
111 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
112 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
113 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
114 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
115 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
116 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
117 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
118 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
119 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
120 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
121 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
122 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
123 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
124 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
125 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
126 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
127 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
128 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
129 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
130 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
131 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
132 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
133 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
134 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
135 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
136 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
137 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
138 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
139 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
140 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
141 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
142 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 60.59
Metatranscriptomes 2.94
Isolates 36.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.53
Nodule 2.35
Rhizoplane 0.59
Rhizosphere 72.35
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10003371 3300003316 Bacteria 16995
2 rootL2_10004813 3300003322 Bacteria 12728
3 Ga0006562J51391_1042099 3300003578 Bacteria 3310
4 Ga0006562J51391_1042100 3300003578 Bacteria 2306
5 Ga0006562J51391_1101084 3300003578 Bacteria 2413
6 Ga0058863_11720403 3300004799 Bacteria 1450
7 Ga0068853_100036938 3300005539 Bacteria 4155
8 Ga0070672_100161791 3300005543 Bacteria 1857
9 Ga0075365_10022301 3300006038 Bacteria 3966
10 Ga0075367_10000718 3300006178 Bacteria 12810
11 Ga0099826_10041035 3300006948 Bacteria 3215
12 Ga0105245_10099355 3300009098 Bacteria 2690
13 Ga0105238_10195428 3300009551 Bacteria 1999
14 Ga0182007_10007018 3300015262 Bacteria 4776
15 Ga0183367_1002 3300015688 Bacteria 1101531
16 Ga0207426_1005414 3300025302 Bacteria 5833
17 Ga0207687_10178140 3300025927 Bacteria 1645
18 Ga0207639_10043298 3300026041 Bacteria 3379
19 Ga0209371_1009072 3300027312 Bacteria 3202
20 Ga0307515_10077361 3300028794 Bacteria 4396
21 Ga0268256_1009316 3300030500 Bacteria 3278
22 Ga0307513_10052909 3300031456 Bacteria 4368
23 Ga0307508_10027078 3300031616 Bacteria 5192
24 Ga0307514_10012774 3300031649 Bacteria 6979
25 Ga0307413_10063642 3300031824 Bacteria 2288
26 Ga0307510_10011017 3300033180 Bacteria 10749
27 Ga0395898_0006282 3300037466 Bacteria 12702
28 Ga0395898_0016951 3300037466 Bacteria 7439
29 Ga0395901_0109635 3300038443 Bacteria 2898
30 Ga0439436_0001222 3300041404 Bacteria 7317
31 Ga0439436_0010269 3300041404 Bacteria 2858
32 Ga0439439_0000517 3300041406 Bacteria 6662
33 Ga0451841_0037966 3300041498 Bacteria 2038
34 Ga0451853_0264008 3300041512 Bacteria 2477
35 Ga0451853_1948078 3300041512 Bacteria 6217
36 Ga0451853_2294185 3300041512 Bacteria 2760
37 Ga0439448_0002916 3300042005 Bacteria 4689
38 Ga0439449_0006546 3300042007 Bacteria 4451
39 Ga0439457_000500 3300042014 Bacteria 11363
40 Ga0439457_000561 3300042014 Bacteria 10837
41 Ga0450898_004385 3300042134 Bacteria 2084
42 Ga0450899_000197 3300042135 Bacteria 6172
43 Ga0450906_008746 3300042145 Bacteria 1947
44 Ga0466963_0000947 3300044694 Bacteria 14863
45 Ga0466964_0008059 3300044706 Bacteria 3950
46 Ga0466971_0080970 3300044719 Bacteria 1480
47 Ga0466970_0029840 3300044765 Bacteria 2874
48 Ga0466967_0032286 3300045976 Bacteria 4419
49 Ga0495603_0005114 3300046455 Bacteria 7834
50 Ga0495603_0015900 3300046455 Bacteria 4548
51 Ga0495603_0041967 3300046455 Bacteria 2735
52 Ga0495629_0001337 3300046459 Bacteria 19390
53 Ga0495629_0008388 3300046459 Bacteria 7601
54 Ga0495629_0011040 3300046459 Bacteria 6563
55 Ga0495638_0041395 3300046460 Bacteria 2915
56 Ga0495639_0007737 3300046475 Bacteria 4621
57 Ga0495585_0033891 3300046492 Bacteria 2888
58 Ga0495594_0000809 3300046499 Bacteria 16155
59 Ga0495611_0017237 3300046648 Bacteria 3088
60 Ga0495661_0109472 3300046665 Bacteria 1542
61 Ga0495588_0010721 3300046674 Bacteria 4276
62 Ga0495613_0007615 3300046689 Bacteria 8052
63 Ga0495670_0013604 3300046691 Bacteria 4001
64 Ga0495589_0020349 3300046794 Bacteria 3394
65 Ga0495636_0005141 3300047318 Bacteria 5137
66 Ga0495636_0008468 3300047318 Bacteria 4058
67 Ga0495636_0139667 3300047318 Bacteria 1081
68 Ga0495676_0007478 3300047321 Bacteria 10019
69 Ga0495687_001865 3300047443 Bacteria 18321
70 Ga0495685_010097 3300047447 Bacteria 3163
71 Ga0495685_010593 3300047447 Bacteria 3096
72 Ga0495686_0056612 3300047472 Bacteria 2449
73 Ga0495614_0000238 3300048089 Bacteria 21398
74 Ga0495614_0026263 3300048089 Bacteria 2510
75 Ga0501315_006225 3300049531 Bacteria 1322
76 Ga0501031_0006273 3300049568 Bacteria 7750
77 Ga0501032_0077129 3300049569 Bacteria 2219
78 Ga0501033_0004249 3300049570 Bacteria 11520
79 Ga0501033_0005293 3300049570 Bacteria 10233
80 Ga0501033_0017861 3300049570 Bacteria 5355
81 Ga0501033_0109590 3300049570 Bacteria 2010
82 Ga0501034_0027491 3300049571 Bacteria 5787
83 Ga0501034_0058250 3300049571 Bacteria 3882
84 Ga0501034_0227325 3300049571 Bacteria 1816
85 Ga0501036_0000337 3300049572 Bacteria 32891
86 Ga0501036_0017475 3300049572 Bacteria 5997
87 Ga0501037_0151895 3300049573 Bacteria 1654
88 Ga0501039_0003165 3300049575 Bacteria 12309
89 Ga0501043_0003642 3300049579 Bacteria 12647
90 Ga0501043_0018356 3300049579 Bacteria 5485
91 Ga0501046_0093270 3300049580 Bacteria 2314
92 Ga0501047_0013526 3300049581 Bacteria 7737
93 Ga0501047_0018594 3300049581 Bacteria 6662
94 Ga0501048_0009720 3300049582 Bacteria 7213
95 Ga0501070_0001714 3300049586 Bacteria 19423
96 Ga0501070_0106801 3300049586 Bacteria 2314
97 Ga0501070_0183637 3300049586 Bacteria 1721
98 Ga0501074_0001186 3300049590 Bacteria 17124
99 Ga0501080_0284977 3300049742 Bacteria 1501
100 Ga0501035_0066583 3300049822 Bacteria 3197
101 Ga0501035_0185700 3300049822 Bacteria 1790
102 Ga0501044_0007089 3300049823 Bacteria 12337
103 Ga0501044_0008212 3300049823 Bacteria 11455
104 Ga0501044_0089245 3300049823 Bacteria 3111
105 Ga0501045_0044134 3300049824 Bacteria 3247
106 nmdc:mga0yw44_42644_c1 3300050492 Bacteria 2706
107 nmdc:mga06z11_1622_c1 3300050494 Bacteria 8412
108 Ga0500600_0032159 3300053149 Bacteria 3077
109 2954678156 2954673503 Bacteria 9685905
110 2547410042 2547132111 Bacteria 8013147
111 2554256873 2554235005 Bacteria 6457341
112 2585308169 2582581313 Bacteria 10042643
113 2643902812 2643221578 Bacteria 9213798
114 2644261674 2643221647 Bacteria 10741251
115 2644404679 2643221673 Bacteria 9196637
116 2644633429 2643221714 Bacteria 9015452
117 2784589647 2784132148 Bacteria 8627943
118 2785341963 2784746763 Bacteria 9783172
119 2785370700 2784746768 Bacteria 10036182
120 2786671883 2786546132 Bacteria 10419719
121 2793985258 2791355406 Bacteria 11364898
122 2808912832 2808606375 Bacteria 9466072
123 2809233320 2808606448 Bacteria 8656184
124 2811845166 2808606982 Bacteria 7791042
125 2812356795 2811994879 Bacteria 9313447
126 2812479516 2811994917 Bacteria 7761064
127 2819695300 2818991463 Bacteria 7948711
128 2852640413 2852635781 Bacteria 8251373
129 2862181697 2862178590 Bacteria 8583590
130 2862286778 2862281513 Bacteria 9621493
131 2862292183 2862290372 Bacteria 7471434
132 2862392793 2862382967 Bacteria 10317375
133 2862578262 2862574272 Bacteria 10567477
134 2863411651 2863404153 Bacteria 9672205
135 2867432778 2867428634 Bacteria 9590268
136 2875395946 2875391855 Bacteria 7600475
137 2877679887 2877676314 Bacteria 9512378
138 2912718545 2912715099 Bacteria 9460473
139 2912730863 2912723979 Bacteria 8557534
140 2912762049 2912757875 Bacteria 7940295
141 2935394879 2935390628 Bacteria 7043367
142 2946069078 2946064051 Bacteria 8957905
143 2946077016 2946072368 Bacteria 8999607
144 2947227859 2947224130 Bacteria 9938529
145 2954384843 2954380949 Bacteria 10050426
146 2954686003 2954682443 Bacteria 9862841
147 2954710850 2954701450 Bacteria 10834262
148 2954715079 2954711539 Bacteria 10867210
149 2954725021 2954721474 Bacteria 10456478
150 2954736797 2954731030 Bacteria 10243860
151 2954743954 2954740390 Bacteria 10229294
152 2954755645 2954749733 Bacteria 10366972
153 2954762895 2954759201 Bacteria 9358192
154 2966601532 2966598605 Bacteria 7676064
155 2997606389 2997600082 Bacteria 9896405
156 3006393702 3006393351 Bacteria 6615579
157 3006492641 3006486233 Bacteria 8157040
158 3006497745 3006493962 Bacteria 8825450
159 8008566459 8008558824 Bacteria 10610750
160 8008577877 8008574985 Bacteria 7815457
161 8023626436 8023623736 Bacteria 8593882
162 8025534825 8025530807 Bacteria 8495698
163 8047897047 8047893842 Bacteria 11723082
164 8048132510 8048127548 Bacteria 11053136
165 8048361905 8048356638 Bacteria 11044339
166 8048374031 8048369669 Bacteria 11666822
167 8048384195 8048379754 Bacteria 11877923
168 8048410746 8048406513 Bacteria 8936924
169 8056448885 8056447290 Bacteria 7680491
170 8056833891 8056829672 Bacteria 9045328
171 rootH1_10003371
172 rootL2_10004813
173 Ga0006562J51391_1042099
174 Ga0006562J51391_1042100
175 Ga0006562J51391_1101084
176 Ga0058863_11720403
177 Ga0068853_100036938
178 Ga0070672_100161791
179 Ga0075365_10022301
180 Ga0075367_10000718
181 Ga0099826_10041035
182 Ga0105245_10099355
183 Ga0105238_10195428
184 Ga0182007_10007018
185 Ga0183367_1002
186 Ga0207426_1005414
187 Ga0207687_10178140
188 Ga0207639_10043298
189 Ga0209371_1009072
190 Ga0307515_10077361
191 Ga0268256_1009316
192 Ga0307513_10052909
193 Ga0307508_10027078
194 Ga0307514_10012774
195 Ga0307413_10063642
196 Ga0307510_10011017
197 Ga0395898_0006282
198 Ga0395898_0016951
199 Ga0395901_0109635
200 Ga0439436_0001222
201 Ga0439436_0010269
202 Ga0439439_0000517
203 Ga0451841_0037966
204 Ga0451853_0264008
205 Ga0451853_1948078
206 Ga0451853_2294185
207 Ga0439448_0002916
208 Ga0439449_0006546
209 Ga0439457_000500
210 Ga0439457_000561
211 Ga0450898_004385
212 Ga0450899_000197
213 Ga0450906_008746
214 Ga0466963_0000947
215 Ga0466964_0008059
216 Ga0466971_0080970
217 Ga0466970_0029840
218 Ga0466967_0032286
219 Ga0495603_0005114
220 Ga0495603_0015900
221 Ga0495603_0041967
222 Ga0495629_0001337
223 Ga0495629_0008388
224 Ga0495629_0011040
225 Ga0495638_0041395
226 Ga0495639_0007737
227 Ga0495585_0033891
228 Ga0495594_0000809
229 Ga0495611_0017237
230 Ga0495661_0109472
231 Ga0495588_0010721
232 Ga0495613_0007615
233 Ga0495670_0013604
234 Ga0495589_0020349
235 Ga0495636_0005141
236 Ga0495636_0008468
237 Ga0495636_0139667
238 Ga0495676_0007478
239 Ga0495687_001865
240 Ga0495685_010097
241 Ga0495685_010593
242 Ga0495686_0056612
243 Ga0495614_0000238
244 Ga0495614_0026263
245 Ga0501315_006225
246 Ga0501031_0006273
247 Ga0501032_0077129
248 Ga0501033_0004249
249 Ga0501033_0005293
250 Ga0501033_0017861
251 Ga0501033_0109590
252 Ga0501034_0027491
253 Ga0501034_0058250
254 Ga0501034_0227325
255 Ga0501036_0000337
256 Ga0501036_0017475
257 Ga0501037_0151895
258 Ga0501039_0003165
259 Ga0501043_0003642
260 Ga0501043_0018356
261 Ga0501046_0093270
262 Ga0501047_0013526
263 Ga0501047_0018594
264 Ga0501048_0009720
265 Ga0501070_0001714
266 Ga0501070_0106801
267 Ga0501070_0183637
268 Ga0501074_0001186
269 Ga0501080_0284977
270 Ga0501035_0066583
271 Ga0501035_0185700
272 Ga0501044_0007089
273 Ga0501044_0008212
274 Ga0501044_0089245
275 Ga0501045_0044134
276 nmdc:mga0yw44_42644_c1
277 nmdc:mga06z11_1622_c1
278 Ga0500600_0032159
279 2954678156
280 2547410042
281 2554256873
282 2585308169
283 2643902812
284 2644261674
285 2644404679
286 2644633429
287 2784589647
288 2785341963
289 2785370700
290 2786671883
291 2793985258
292 2808912832
293 2809233320
294 2811845166
295 2812356795
296 2812479516
297 2819695300
298 2852640413
299 2862181697
300 2862286778
301 2862292183
302 2862392793
303 2862578262
304 2863411651
305 2867432778
306 2875395946
307 2877679887
308 2912718545
309 2912730863
310 2912762049
311 2935394879
312 2946069078
313 2946077016
314 2947227859
315 2954384843
316 2954686003
317 2954710850
318 2954715079
319 2954725021
320 2954736797
321 2954743954
322 2954755645
323 2954762895
324 2966601532
325 2997606389
326 3006393702
327 3006492641
328 3006497745
329 8008566459
330 8008577877
331 8023626436
332 8025534825
333 8047897047
334 8048132510
335 8048361905
336 8048374031
337 8048384195
338 8048410746
339 8056448885
340 8056833891

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03888

MucB_RseB

MucB/RseB N-terminal domain

162

325

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
2yzy-assembly1.cif.gz_A crystal structure of uncharacterized conserved protein from thermus thermophilus hb8 0.6501 65 292
4mxt-assembly1.cif.gz_A-2 crystal structure of an outer-membrane lipoprotein carrier protein (bacuni_04723) from bacteroides uniformis atcc 8492 at 1.40 a resolution 0.6457 61 292
2p4b-assembly2.cif.gz_C-2 crystal structure of e.coli rseb 0.6449 65 403
5c0w-assembly1.cif.gz_H structure of a 12-subunit nuclear exosome complex bound to single-stranded rna substrates 0.6414 375 399
2yzy-assembly1.cif.gz_A crystal structure of uncharacterized conserved protein from thermus thermophilus hb8 0.6377 65 292
ID Description Score Start End Superfamily
af_F1R3F8_89_193_3.30.390.150 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1; 0.6951 142 186 3.30.390.150
2v43A01 Mainly Beta;Clam;outer membrane lipoprotein receptor (LolB), chain A;Lipoprotein localisation LolA/LolB/LppX 0.6946 65 285 2.50.20.10
af_Q58100_22_207_2.50.20.10 Mainly Beta;Clam;outer membrane lipoprotein receptor (LolB), chain A;Lipoprotein localisation LolA/LolB/LppX 0.6899 60 293 2.50.20.10
2v43A01 Mainly Beta;Clam;outer membrane lipoprotein receptor (LolB), chain A;Lipoprotein localisation LolA/LolB/LppX 0.688 65 285 2.50.20.10
af_Q58100_22_207_2.50.20.10 Mainly Beta;Clam;outer membrane lipoprotein receptor (LolB), chain A;Lipoprotein localisation LolA/LolB/LppX 0.6868 60 293 2.50.20.10
ID Description Score Start End GO Terms
AF-A0A6B3I2Q1-F1-model_v4 DUF2092 domain-containing protein 0.8646 204 291
AF-A0A699UQC1-F1-model_v4 Uncharacterized protein 0.8592 202 263
AF-A0A0L8QPV0-F1-model_v4 deleted 0.8141 107 402
AF-A0A1C5CFV3-F1-model_v4 Outer membrane lipoprotein-sorting protein 0.8134 209 402
AF-E1YKL1-F1-model_v4 Uncharacterized protein 0.7996 201 260

Map