F257546

General Info

Members Datasets Scaffolds Average Seq Length
170 126 340 303

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0005141|Ga0501032_0005141_1932_2951
Length 339
Sequence MEPIRALLEALPPAMRDPVLFAVPFFLLLLILEWAAARKLESVEGADRAPEGAYQTRDAWASISMGLVSVATTAGWKLLALLGYAALYSYVAPWHLPAGRWYTWVVAIVGVDLLFYSYHRVAHRVRLIWATHQSHHSSEYFNFATALRQKWNNSGEIVAWIPLPLLGVPPWLVFASFSINLVYQFWVHTERIEKLWRPIEYIFNTPSHHRVHHGRDQQYLDRNYGGILIIWDRLFGTFQPELFRPHYGLTKPVDSFNIWTLQTHEYGAIARDVGRATRWRDRFGYVFGPPGWAPAEDVTGSLPDVLNCAEHNAPQARPRSVGSVGAGLDPVGRPESKGI

Samples

Sample ID Description Type Environment
1 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
16 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
17 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
18 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
19 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
20 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
25 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
26 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
27 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
28 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
29 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
30 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
31 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
40 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
41 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
42 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
43 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
44 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
45 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
46 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
47 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
48 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
49 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
50 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
51 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
52 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
53 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
54 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
55 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
56 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
57 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
58 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
59 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
60 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
61 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
62 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
65 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
66 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
67 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
68 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
69 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
70 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
71 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
72 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
73 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
74 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
75 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
76 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
77 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
78 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
79 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
80 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
81 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
90 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
91 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
93 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
94 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
95 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
96 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
97 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
98 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
99 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
100 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
101 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
102 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
103 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
104 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
105 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
106 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
107 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
108 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
109 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
110 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
111 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
112 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
113 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
114 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
115 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
116 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
117 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
118 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
119 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
120 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
121 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
122 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
123 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
124 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
125 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
126 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 87.06
Metatranscriptomes 0
Isolates 12.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20
Nodule 0.59
Rhizoplane 8.24
Rhizosphere 52.35
Stem 0
Stem Tuber 0.59
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501032_0005141 3300049569 Bacteria 9760
2 JGI24735J21928_10013713 3300002067 Bacteria 2544
3 Ga0055540_1002101 3300003792 Bacteria 10903
4 Ga0055540_1003269 3300003792 Bacteria 7925
5 Ga0068868_100068341 3300005338 Bacteria 2829
6 Ga0070668_100002337 3300005347 Bacteria 13935
7 Ga0070714_100000077 3300005435 Bacteria 84205
8 Ga0070714_100017735 3300005435 Bacteria 5772
9 Ga0070714_100177703 3300005435 Bacteria 1935
10 Ga0070713_100024081 3300005436 Bacteria 4736
11 Ga0070700_100000004 3300005441 Bacteria 245987
12 Ga0070663_100002377 3300005455 Bacteria 10582
13 Ga0070663_100282973 3300005455 Bacteria 1322
14 Ga0070678_100241385 3300005456 Bacteria 1511
15 Ga0070685_10022711 3300005466 Bacteria 3424
16 Ga0068858_100205638 3300005842 Bacteria 1863
17 Ga0081455_10032609 3300005937 Bacteria 4692
18 Ga0075365_10004890 3300006038 Bacteria 7158
19 Ga0075365_10027576 3300006038 Bacteria 3615
20 Ga0075365_10271062 3300006038 Bacteria 1194
21 Ga0075363_100012319 3300006048 Bacteria 4119
22 Ga0075364_10003114 3300006051 Bacteria 9388
23 Ga0075364_10033101 3300006051 Bacteria 3325
24 Ga0075364_10043397 3300006051 Bacteria 2924
25 Ga0075364_10057529 3300006051 Bacteria 2547
26 Ga0075362_10079255 3300006177 Bacteria 1512
27 Ga0075369_10010680 3300006186 Bacteria 3597
28 Ga0075369_10024154 3300006186 Bacteria 2517
29 Ga0075369_10054215 3300006186 Bacteria 1741
30 Ga0075370_10010109 3300006353 Bacteria 4922
31 Ga0099795_10010494 3300007788 Bacteria 2730
32 Ga0105240_10063391 3300009093 Bacteria 4598
33 Ga0105237_10203797 3300009545 Bacteria 1979
34 Ga0105238_10080322 3300009551 Bacteria 3251
35 Ga0157370_10024892 3300013104 Bacteria 5926
36 Ga0157374_10162173 3300013296 Bacteria 2177
37 Ga0157378_10286063 3300013297 Bacteria 1591
38 Ga0157372_10000025 3300013307 Bacteria 195491
39 Ga0157375_10363690 3300013308 Bacteria 1613
40 Ga0213874_10070898 3300021377 Bacteria 1111
41 Ga0213876_10010749 3300021384 Bacteria 4905
42 Ga0209051_1004222 3300025303 Bacteria 8956
43 Ga0209051_1004937 3300025303 Bacteria 7978
44 Ga0209051_1025824 3300025303 Bacteria 2381
45 Ga0207695_10036971 3300025913 Bacteria 5271
46 Ga0207694_10071518 3300025924 Bacteria 2711
47 Ga0207700_10119946 3300025928 Bacteria 2131
48 Ga0207664_10000091 3300025929 Bacteria 84244
49 Ga0207664_10158780 3300025929 Bacteria 1927
50 Ga0207668_10018190 3300025972 Bacteria 4416
51 Ga0207678_10001596 3300026067 Bacteria 20859
52 Ga0207678_10090334 3300026067 Bacteria 2618
53 Ga0207708_10000008 3300026075 Bacteria 245837
54 Ga0207428_10380449 3300027907 Bacteria 1035
55 Ga0307515_10056689 3300028794 Bacteria 5688
56 Ga0307509_10153941 3300031507 Bacteria 2209
57 Ga0307518_10000054 3300031838 Bacteria 76765
58 Ga0307415_100241035 3300032126 Bacteria 1463
59 Ga0307507_10071620 3300033179 Bacteria 3132
60 Ga0307510_10189628 3300033180 Bacteria 1605
61 Ga0436364_1305535 3300037853 Bacteria 1505
62 Ga0436365_0031186 3300039437 Bacteria 6010
63 Ga0436365_0522389 3300039437 Bacteria 5460
64 Ga0436363_0257707 3300039450 Bacteria 3625
65 Ga0439461_0009762 3300041410 Bacteria 1747
66 Ga0439461_0010739 3300041410 Bacteria 1687
67 Ga0451843_1072100 3300041509 Bacteria 1240
68 Ga0439431_0005432 3300041997 Bacteria 2813
69 Ga0439434_0004314 3300042435 Bacteria 4157
70 Ga0466972_0006834 3300044658 Bacteria 5725
71 Ga0466972_0054043 3300044658 Bacteria 1933
72 Ga0466972_0069978 3300044658 Bacteria 1674
73 Ga0466965_0003871 3300044683 Bacteria 6611
74 Ga0466965_0020170 3300044683 Bacteria 3202
75 Ga0466965_0187937 3300044683 Bacteria 1092
76 Ga0466966_0036543 3300044684 Bacteria 3171
77 Ga0466961_0026623 3300044693 Bacteria 3717
78 Ga0466964_0070018 3300044706 Bacteria 1481
79 Ga0466970_0012407 3300044765 Bacteria 4356
80 Ga0466970_0062466 3300044765 Bacteria 1996
81 Ga0466957_0065846 3300044842 Bacteria 2233
82 Ga0466960_0000012 3300044901 Bacteria 60091
83 Ga0466959_0021701 3300045049 Bacteria 4739
84 Ga0466958_0164326 3300045836 Bacteria 1404
85 Ga0466967_0005667 3300045976 Bacteria 8700
86 Ga0466967_0060694 3300045976 Bacteria 3352
87 Ga0466967_0393799 3300045976 Bacteria 1347
88 Ga0495638_0013801 3300046460 Bacteria 5485
89 Ga0495641_0050013 3300046461 Bacteria 1912
90 Ga0495606_0010051 3300046507 Bacteria 7909
91 Ga0495600_0039930 3300046809 Bacteria 3056
92 Ga0496100_0010118 3300048903 Bacteria 5330
93 Ga0496100_0056594 3300048903 Bacteria 2566
94 Ga0496102_0010344 3300048905 Bacteria 8024
95 Ga0496102_0027556 3300048905 Bacteria 5074
96 Ga0496102_0441991 3300048905 Bacteria 1220
97 Ga0496104_0041894 3300048907 Bacteria 4294
98 Ga0496105_0017048 3300048908 Bacteria 5814
99 Ga0496106_0123671 3300048909 Bacteria 2024
100 Ga0496106_0149922 3300048909 Bacteria 1839
101 Ga0496107_0011884 3300048910 Bacteria 6082
102 Ga0496107_0102413 3300048910 Bacteria 2099
103 Ga0496108_0231597 3300048911 Bacteria 1606
104 Ga0496114_0000808 3300048917 Bacteria 23470
105 Ga0496115_0195614 3300048918 Bacteria 1671
106 Ga0496121_0107739 3300048924 Bacteria 2133
107 Ga0496122_0046801 3300048925 Bacteria 3345
108 Ga0496123_0176559 3300048926 Bacteria 1120
109 Ga0496126_0001415 3300048929 Bacteria 37973
110 Ga0496126_0009125 3300048929 Bacteria 10586
111 Ga0496126_0009171 3300048929 Bacteria 10555
112 Ga0501032_0013339 3300049569 Bacteria 5850
113 Ga0501034_0005683 3300049571 Bacteria 13568
114 Ga0501034_0006434 3300049571 Bacteria 12647
115 Ga0501034_0083683 3300049571 Bacteria 3192
116 Ga0501036_0007552 3300049572 Bacteria 8870
117 Ga0501037_0059221 3300049573 Bacteria 2794
118 Ga0501038_0072867 3300049574 Bacteria 2909
119 Ga0501039_0014863 3300049575 Bacteria 5951
120 Ga0501043_0003707 3300049579 Bacteria 12555
121 Ga0501046_0008516 3300049580 Bacteria 8934
122 Ga0501047_0008076 3300049581 Bacteria 9927
123 Ga0501069_0113414 3300049585 Bacteria 1545
124 Ga0501070_0000247 3300049586 Bacteria 50837
125 Ga0501070_0002287 3300049586 Bacteria 16837
126 Ga0501035_0000640 3300049822 Bacteria 38536
127 Ga0501035_0001981 3300049822 Bacteria 20487
128 Ga0501044_0001281 3300049823 Bacteria 29713
129 Ga0501044_0008867 3300049823 Bacteria 10995
130 Ga0501044_0016010 3300049823 Bacteria 8066
131 Ga0501044_0056265 3300049823 Bacteria 4038
132 nmdc:mga03683_166344_c1 3300050489 Bacteria 1001
133 nmdc:mga03n38_8865_c1 3300050490 Bacteria 3631
134 nmdc:mga00v17_1405_c1 3300050491 Bacteria 12622
135 nmdc:mga00v17_148939_c1 3300050491 Bacteria 1503
136 nmdc:mga00v17_189691_c1 3300050491 Bacteria 1327
137 nmdc:mga00v17_207587_c1 3300050491 Bacteria 1267
138 nmdc:mga00v17_67078_c1 3300050491 Bacteria 2216
139 nmdc:mga0yw44_86881_c1 3300050492 Bacteria 1970
140 nmdc:mga06z11_94227_c1 3300050494 Bacteria 1631
141 nmdc:mga07m45_85198_c1 3300050496 Bacteria 1807
142 nmdc:mga0sz30_28025_c1 3300050516 Bacteria 2316
143 nmdc:mga0sz30_61562_c1 3300050516 Bacteria 1604
144 Ga0500635_0003882 3300053080 Bacteria 3800
145 Ga0495619_0230901 3300053085 Bacteria 1282
146 Ga0500643_010006 3300053087 Bacteria 3573
147 Ga0500652_007456 3300053131 Bacteria 3582
148 Ga0500645_000006 3300053730 Bacteria 276677
149 2523384609 2523231044 Bacteria 6434991
150 2586062299 2585427649 Bacteria 9053857
151 2644485394 2643221687 Bacteria 6500351
152 2644634688 2643221715 Bacteria 6671032
153 2738704254 2738541274 Bacteria 6909446
154 2739331262 2738543028 Bacteria 6917070
155 2744955936 2744054611 Bacteria 5611514
156 2809588526 2808606522 Bacteria 9488490
157 2842140375 2842134933 Bacteria 5847019
158 2855390438 2855386786 Bacteria 4752232
159 2899370712 2899370129 Bacteria 6781179
160 2902804534 2902799365 Bacteria 5419524
161 2902811221 2902810491 Bacteria 6794147
162 2904768161 2904765812 Bacteria 5369154
163 2904775517 2904770941 Bacteria 5580202
164 2908815455 2908811453 Bacteria 5478616
165 2915770326 2915768154 Bacteria 8424322
166 2919423417 2919420072 Bacteria 5390363
167 2919436025 2919432681 Bacteria 5390474
168 2919716712 2919713450 Bacteria 7431245
169 2929215793 2929212328 Bacteria 7708288
170 8003323894 8003314358 Bacteria 10575343
171 Ga0501032_0005141
172 JGI24735J21928_10013713
173 Ga0055540_1002101
174 Ga0055540_1003269
175 Ga0068868_100068341
176 Ga0070668_100002337
177 Ga0070714_100000077
178 Ga0070714_100017735
179 Ga0070714_100177703
180 Ga0070713_100024081
181 Ga0070700_100000004
182 Ga0070663_100002377
183 Ga0070663_100282973
184 Ga0070678_100241385
185 Ga0070685_10022711
186 Ga0068858_100205638
187 Ga0081455_10032609
188 Ga0075365_10004890
189 Ga0075365_10027576
190 Ga0075365_10271062
191 Ga0075363_100012319
192 Ga0075364_10003114
193 Ga0075364_10033101
194 Ga0075364_10043397
195 Ga0075364_10057529
196 Ga0075362_10079255
197 Ga0075369_10010680
198 Ga0075369_10024154
199 Ga0075369_10054215
200 Ga0075370_10010109
201 Ga0099795_10010494
202 Ga0105240_10063391
203 Ga0105237_10203797
204 Ga0105238_10080322
205 Ga0157370_10024892
206 Ga0157374_10162173
207 Ga0157378_10286063
208 Ga0157372_10000025
209 Ga0157375_10363690
210 Ga0213874_10070898
211 Ga0213876_10010749
212 Ga0209051_1004222
213 Ga0209051_1004937
214 Ga0209051_1025824
215 Ga0207695_10036971
216 Ga0207694_10071518
217 Ga0207700_10119946
218 Ga0207664_10000091
219 Ga0207664_10158780
220 Ga0207668_10018190
221 Ga0207678_10001596
222 Ga0207678_10090334
223 Ga0207708_10000008
224 Ga0207428_10380449
225 Ga0307515_10056689
226 Ga0307509_10153941
227 Ga0307518_10000054
228 Ga0307415_100241035
229 Ga0307507_10071620
230 Ga0307510_10189628
231 Ga0436364_1305535
232 Ga0436365_0031186
233 Ga0436365_0522389
234 Ga0436363_0257707
235 Ga0439461_0009762
236 Ga0439461_0010739
237 Ga0451843_1072100
238 Ga0439431_0005432
239 Ga0439434_0004314
240 Ga0466972_0006834
241 Ga0466972_0054043
242 Ga0466972_0069978
243 Ga0466965_0003871
244 Ga0466965_0020170
245 Ga0466965_0187937
246 Ga0466966_0036543
247 Ga0466961_0026623
248 Ga0466964_0070018
249 Ga0466970_0012407
250 Ga0466970_0062466
251 Ga0466957_0065846
252 Ga0466960_0000012
253 Ga0466959_0021701
254 Ga0466958_0164326
255 Ga0466967_0005667
256 Ga0466967_0060694
257 Ga0466967_0393799
258 Ga0495638_0013801
259 Ga0495641_0050013
260 Ga0495606_0010051
261 Ga0495600_0039930
262 Ga0496100_0010118
263 Ga0496100_0056594
264 Ga0496102_0010344
265 Ga0496102_0027556
266 Ga0496102_0441991
267 Ga0496104_0041894
268 Ga0496105_0017048
269 Ga0496106_0123671
270 Ga0496106_0149922
271 Ga0496107_0011884
272 Ga0496107_0102413
273 Ga0496108_0231597
274 Ga0496114_0000808
275 Ga0496115_0195614
276 Ga0496121_0107739
277 Ga0496122_0046801
278 Ga0496123_0176559
279 Ga0496126_0001415
280 Ga0496126_0009125
281 Ga0496126_0009171
282 Ga0501032_0013339
283 Ga0501034_0005683
284 Ga0501034_0006434
285 Ga0501034_0083683
286 Ga0501036_0007552
287 Ga0501037_0059221
288 Ga0501038_0072867
289 Ga0501039_0014863
290 Ga0501043_0003707
291 Ga0501046_0008516
292 Ga0501047_0008076
293 Ga0501069_0113414
294 Ga0501070_0000247
295 Ga0501070_0002287
296 Ga0501035_0000640
297 Ga0501035_0001981
298 Ga0501044_0001281
299 Ga0501044_0008867
300 Ga0501044_0016010
301 Ga0501044_0056265
302 nmdc:mga03683_166344_c1
303 nmdc:mga03n38_8865_c1
304 nmdc:mga00v17_1405_c1
305 nmdc:mga00v17_148939_c1
306 nmdc:mga00v17_189691_c1
307 nmdc:mga00v17_207587_c1
308 nmdc:mga00v17_67078_c1
309 nmdc:mga0yw44_86881_c1
310 nmdc:mga06z11_94227_c1
311 nmdc:mga07m45_85198_c1
312 nmdc:mga0sz30_28025_c1
313 nmdc:mga0sz30_61562_c1
314 Ga0500635_0003882
315 Ga0495619_0230901
316 Ga0500643_010006
317 Ga0500652_007456
318 Ga0500645_000006
319 2523384609
320 2586062299
321 2644485394
322 2644634688
323 2738704254
324 2739331262
325 2744955936
326 2809588526
327 2842140375
328 2855390438
329 2899370712
330 2902804534
331 2902811221
332 2904768161
333 2904775517
334 2908815455
335 2915770326
336 2919423417
337 2919436025
338 2919716712
339 2929215793
340 8003323894

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04116

FA_hydroxylase

Fatty acid hydroxylase

104

237

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
6qgh-assembly1.cif.gz_A structure of human bcl-2 in complex with abt-263 0.3387 46 191
5njg-assembly1.cif.gz_B structure of an abc transporter: part of the structure that could be built de novo 0.3077 49 176
4z9v-assembly1.cif.gz_B tctp contains a bh3-like domain, which instead of inhibiting, activates bcl-xl 0.2976 19 173
6uvh-assembly2.cif.gz_C crystal structure of bcl-xl bound to compound 15: (r)-2-(3-(2-((4'-chloro-[1,1'-biphenyl]-2-yl)methyl)-1,2,3,4-tetrahydroisoquinoline-6-carbonyl)-3-(4-methylbenzyl)ureido)-3-((cyclohexylmethyl)sulfonyl)propanoic acid 0.2935 19 173
6uvg-assembly5.cif.gz_J crystal structure of bcl-xl bound to compound 13: (r)-2-(3-([1,1'-biphenyl]-4-carbonyl)-3-(4-methylbenzyl)ureido)-3-(((3r,5r,7r)-adamantan-1-ylmethyl)sulfonyl)propanoic acid 0.2827 21 173
ID Description Score Start End Superfamily
af_Q6ZNB7_250_445_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.6677 228 291 1.20.1070.10
af_Q22833_116_606_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.2587 48 183 1.10.3080.10
af_P24800_30_234_1.20.1250.10 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;; 0.2482 34 177 1.20.1250.10
af_F1R3C0_1_279_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.248 18 192 1.20.1250.20
af_Q6ZNB7_250_445_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.246 228 291 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A3C0XRE7-F1-model_v4 C-5 sterol desaturase 0.9192 53 160 GO:0005506
GO:0006643
GO:0008610
GO:0012505
GO:0016020
GO:0050479
AF-A0A3C0XRE7-F1-model_v4 C-5 sterol desaturase 0.9034 53 160 GO:0005506
GO:0006643
GO:0008610
GO:0012505
GO:0016020
GO:0050479
AF-A0A7Y1YF02-F1-model_v4 Sterol desaturase family protein 0.8747 43 174 GO:0005506
GO:0006643
GO:0008610
GO:0012505
GO:0016020
GO:0050479
AF-A0A7W1L9A0-F1-model_v4 Sterol desaturase family protein 0.8596 5 169 GO:0005506
GO:0006643
GO:0008610
GO:0012505
GO:0016020
GO:0050479
AF-A0A3S4IKG4-F1-model_v4 Fatty acid hydroxylase superfamily 0.8429 53 196 GO:0005506
GO:0006643
GO:0008610
GO:0012505
GO:0016020
GO:0050479

Map