F257529

General Info

Members Datasets Scaffolds Average Seq Length
170 121 157 292

Family's Representative Sequence

Representative Sequence 3300048929|Ga0496126_0006862|Ga0496126_0006862_8254_9189
Length 311
Sequence LPREYAVEVPKPEADADRSAEPANSDFAPTIISWFAANARDLPWRRSGFTAWGTLVSEFMLQQTPVVRVIPRLEEWLERWPTPPALAAVPPGEAVRAWASLGYPRRALALHACAVAITERHGGNVPEDVNALLALPGVGDYTARAVASFAYGHRHPVVDTNVRRVIARAIDGLGEPAPPNAKRDLAAMARLLPEDRADARAFNAGAMELGAIVCTARSPRCDVCPVASSCAWRAAGYPSYDGPRKPVQKRYEGSDRQVRGAILRELRASHIPVSDEELAAVWPDATQRERALSGLLSDGLAVRVDGGYLLP

Samples

Sample ID Description Type Environment
1 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
2 2643221616 Leifsonia sp. Root227 Isolate Unclassified
3 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
4 2643221649 Leifsonia sp. Root4 Isolate Unclassified
5 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
6 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
7 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
8 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
9 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
10 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
11 2928153084 Leifsonia sp. 563 Isolate Unclassified
12 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
13 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
14 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
15 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
16 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
17 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
49 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
50 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
53 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
75 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
76 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
77 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
78 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
79 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
80 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
81 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
82 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
83 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
84 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
85 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
88 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
89 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
90 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
91 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
92 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
93 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
94 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
95 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
96 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
97 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
98 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
99 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
100 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
105 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
106 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
107 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
108 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
109 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
110 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
111 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
112 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
113 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
114 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
115 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
116 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
117 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
118 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
119 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
120 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
121 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.41
Metatranscriptomes 2.94
Isolates 7.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.29
Nodule 0
Rhizoplane 3.53
Rhizosphere 68.24
Stem 0
Stem Tuber 0.59
Unclassified 12.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10022647 3300002067 Bacteria 1910
2 JGI25164J39214_1000504 3300002772 Bacteria 18881
3 JGI25165J46597_1000002 3300003214 Bacteria 765387
4 Ga0006562J51391_1037234 3300003578 Bacteria 5676
5 Ga0006562J51391_1037236 3300003578 Bacteria 2650
6 Ga0065714_10066705 3300005288 Bacteria 6425
7 Ga0070658_10004717 3300005327 Bacteria 11085
8 Ga0070658_10005308 3300005327 Bacteria 10458
9 Ga0070658_10008275 3300005327 Bacteria 8366
10 Ga0068868_100037922 3300005338 Bacteria 3739
11 Ga0068868_100066899 3300005338 Bacteria 2858
12 Ga0070659_100005170 3300005366 Bacteria 9360
13 Ga0070659_100070828 3300005366 Bacteria 2771
14 Ga0070714_100049141 3300005435 Bacteria 3590
15 Ga0070710_10060220 3300005437 Bacteria 2159
16 Ga0070685_10050263 3300005466 Bacteria 2408
17 Ga0068853_100005169 3300005539 Bacteria 10202
18 Ga0068853_100055709 3300005539 Bacteria 3408
19 Ga0068853_100077613 3300005539 Bacteria 2901
20 Ga0068855_100003100 3300005563 Bacteria 20345
21 Ga0068855_100060691 3300005563 Bacteria 4421
22 Ga0068855_100150096 3300005563 Bacteria 2650
23 Ga0068855_100594926 3300005563 Bacteria 1193
24 Ga0068857_100006075 3300005577 Bacteria 10313
25 Ga0068856_100091903 3300005614 Bacteria 3019
26 Ga0068856_100129127 3300005614 Bacteria 2531
27 Ga0068852_100005464 3300005616 Bacteria 9091
28 Ga0068852_100054571 3300005616 Bacteria 3445
29 Ga0068851_10000005 3300005834 Bacteria 262808
30 Ga0068858_100000058 3300005842 Bacteria 117238
31 Ga0075365_10030437 3300006038 Bacteria 3457
32 Ga0075365_10122777 3300006038 Bacteria 1793
33 Ga0075365_10163243 3300006038 Bacteria 1553
34 Ga0075364_10181603 3300006051 Bacteria 1424
35 Ga0105240_10020926 3300009093 Bacteria 8710
36 Ga0105240_10388675 3300009093 Bacteria 1574
37 Ga0105240_10420860 3300009093 Bacteria 1501
38 Ga0111539_10397892 3300009094 Bacteria 1604
39 Ga0105245_10014394 3300009098 Bacteria 6891
40 Ga0105245_10021443 3300009098 Bacteria 5668
41 Ga0105241_10001714 3300009174 Bacteria 16683
42 Ga0105237_10000222 3300009545 Bacteria 80237
43 Ga0105237_10060526 3300009545 Bacteria 3788
44 Ga0105238_10003263 3300009551 Bacteria 16186
45 Ga0105239_10087649 3300010375 Bacteria 3431
46 Ga0105239_10598757 3300010375 Bacteria 1257
47 Ga0157371_10032657 3300013102 Bacteria 3744
48 Ga0157370_10027753 3300013104 Bacteria 5581
49 Ga0157369_10011196 3300013105 Bacteria 10194
50 Ga0157369_10042910 3300013105 Bacteria 4933
51 Ga0157369_10195336 3300013105 Bacteria 2125
52 Ga0163163_10130821 3300014325 Bacteria 2550
53 Ga0157379_10016739 3300014968 Bacteria 6452
54 Ga0206356_11568970 3300020070 Bacteria 1182
55 Ga0206354_11147604 3300020081 Bacteria 2651
56 Ga0206353_10380611 3300020082 Bacteria 2319
57 Ga0207427_100034 3300025231 Bacteria 320342
58 Ga0209437_100360 3300025233 Bacteria 50855
59 Ga0209677_100720 3300025253 Bacteria 16852
60 Ga0209148_1001534 3300025254 Bacteria 11256
61 Ga0209233_1000001 3300025261 Bacteria 2992747
62 Ga0209455_1006472 3300025272 Bacteria 3450
63 Ga0207656_10000001 3300025321 Bacteria 1323684
64 Ga0207656_10000003 3300025321 Bacteria 771644
65 Ga0207656_10000004 3300025321 Bacteria 632320
66 Ga0207705_10000001 3300025909 Bacteria 2061880
67 Ga0207654_10000003 3300025911 Bacteria 1030378
68 Ga0207654_10251524 3300025911 Bacteria 1185
69 Ga0207695_10009229 3300025913 Bacteria 12223
70 Ga0207695_10056094 3300025913 Bacteria 4102
71 Ga0207695_10075863 3300025913 Bacteria 3420
72 Ga0207671_10000001 3300025914 Bacteria 1318881
73 Ga0207657_10012940 3300025919 Bacteria 8204
74 Ga0207657_10166671 3300025919 Bacteria 1787
75 Ga0207649_10028627 3300025920 Bacteria 3281
76 Ga0207694_10000039 3300025924 Bacteria 186164
77 Ga0207687_10004874 3300025927 Bacteria 8919
78 Ga0207687_10057553 3300025927 Bacteria 2731
79 Ga0207664_10130552 3300025929 Bacteria 2114
80 Ga0207690_10007599 3300025932 Bacteria 6432
81 Ga0207690_10125794 3300025932 Bacteria 1869
82 Ga0207667_10004729 3300025949 Bacteria 16666
83 Ga0207667_10018489 3300025949 Bacteria 7813
84 Ga0207667_10108506 3300025949 Bacteria 2863
85 Ga0207667_10149776 3300025949 Bacteria 2402
86 Ga0207658_10040598 3300025986 Bacteria 3365
87 Ga0207677_10025922 3300026023 Bacteria 3666
88 Ga0207677_10196452 3300026023 Bacteria 1600
89 Ga0207703_10002430 3300026035 Bacteria 16140
90 Ga0207639_10006099 3300026041 Bacteria 8175
91 Ga0207639_10053078 3300026041 Bacteria 3091
92 Ga0207678_10069748 3300026067 Bacteria 3014
93 Ga0207702_10112114 3300026078 Bacteria 2427
94 Ga0207702_10218760 3300026078 Bacteria 1774
95 Ga0207674_10007419 3300026116 Bacteria 12779
96 Ga0207674_10210790 3300026116 Bacteria 1892
97 Ga0207698_10001435 3300026142 Bacteria 13842
98 Ga0207698_10010519 3300026142 Bacteria 5953
99 Ga0307515_10105373 3300028794 Bacteria 3358
100 Ga0307515_10158277 3300028794 Bacteria 2325
101 Ga0307514_10005526 3300031649 Bacteria 11229
102 Ga0395899_0015660 3300037312 Bacteria 5782
103 Ga0400490_19047 3300038726 Bacteria 2199
104 Ga0451793_0385551 3300041452 Bacteria 2358
105 Ga0466965_0027016 3300044683 Bacteria 2783
106 Ga0466966_0075828 3300044684 Bacteria 2100
107 Ga0466961_0033771 3300044693 Bacteria 3287
108 Ga0466963_0257849 3300044694 Bacteria 1224
109 Ga0466970_0032395 3300044765 Bacteria 2761
110 Ga0466970_0061369 3300044765 Bacteria 2014
111 Ga0466957_0149850 3300044842 Bacteria 1508
112 Ga0466960_0029856 3300044901 Bacteria 2504
113 Ga0466959_0018620 3300045049 Bacteria 5099
114 Ga0466959_0211865 3300045049 Bacteria 1346
115 Ga0466958_0045144 3300045836 Bacteria 2657
116 Ga0466967_0061794 3300045976 Bacteria 3324
117 Ga0495650_0001494 3300046471 Bacteria 22300
118 Ga0496102_0541605 3300048905 Bacteria 1087
119 Ga0496104_0276832 3300048907 Bacteria 1591
120 Ga0496104_0845208 3300048907 Bacteria 821
121 Ga0496105_0018586 3300048908 Bacteria 5594
122 Ga0496114_0207066 3300048917 Bacteria 1719
123 Ga0496117_0017814 3300048920 Bacteria 5920
124 Ga0496117_0051568 3300048920 Bacteria 2907
125 Ga0496117_0057829 3300048920 Bacteria 2689
126 Ga0496118_0244452 3300048921 Bacteria 1025
127 Ga0496119_0014946 3300048922 Bacteria 6031
128 Ga0496120_0001306 3300048923 Bacteria 30982
129 Ga0496122_0085574 3300048925 Bacteria 2175
130 Ga0496126_0006862 3300048929 Bacteria 12621
131 Ga0496126_0139893 3300048929 Bacteria 2084
132 Ga0501032_0236011 3300049569 Bacteria 1189
133 Ga0501034_0020557 3300049571 Bacteria 6742
134 Ga0501034_0563495 3300049571 Bacteria 1048
135 Ga0501042_0000338 3300049578 Bacteria 23476
136 Ga0501046_0146716 3300049580 Bacteria 1781
137 Ga0501072_0352524 3300049588 Bacteria 1168
138 Ga0501073_0000150 3300049589 Bacteria 46446
139 Ga0501073_0249891 3300049589 Bacteria 1224
140 Ga0501080_0065416 3300049742 Bacteria 3382
141 Ga0501083_0000250 3300049744 Bacteria 34192
142 Ga0501083_0032046 3300049744 Bacteria 3606
143 nmdc:mga00v17_7124_c1 3300050491 Bacteria 5958
144 nmdc:mga0yw44_8650_c1 3300050492 Bacteria 5086
145 Ga0500635_0000015 3300053080 Bacteria 125195
146 Ga0500643_001374 3300053087 Bacteria 14103
147 Ga0500556_0000775 3300053104 Bacteria 18888
148 Ga0500562_000370 3300053108 Bacteria 10851
149 Ga0500593_001805 3300053117 Bacteria 7690
150 Ga0500559_0001995 3300053136 Bacteria 10974
151 Ga0500559_0002152 3300053136 Bacteria 10475
152 Ga0500568_0000098 3300053139 Bacteria 80393
153 Ga0500568_0033335 3300053139 Bacteria 2114
154 Ga0500573_0000007 3300053140 Bacteria 272970
155 Ga0500616_0000302 3300053153 Bacteria 71543
156 Ga0500620_000175 3300053155 Bacteria 13047
157 Ga0466962_0048162 3300061719 Bacteria 2037

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048907 Ga0496104_0845208 Ga0496104_0845208_72_809 245
2 3300005288 Ga0065714_10066705 Ga0065714_100667053 253
3 3300038726 Ga0400490_19047 Ga0400490_19047_460_1323 254
4 3300049589 Ga0501073_0249891 Ga0501073_0249891_118_930 265
5 3300006038 Ga0075365_10122777 Ga0075365_101227773 266
6 3300028794 Ga0307515_10158277 Ga0307515_101582773 268
7 3300049571 Ga0501034_0020557 Ga0501034_0020557_5443_6318 273
8 iso_pu_bacteria 2643221632 2644184004 276
9 3300048920 Ga0496117_0051568 Ga0496117_0051568_824_1762 279
10 3300009093 Ga0105240_10388675 Ga0105240_103886752 280
11 3300009093 Ga0105240_10420860 Ga0105240_104208602 280
12 3300009098 Ga0105245_10021443 Ga0105245_100214435 280
13 3300010375 Ga0105239_10598757 Ga0105239_105987572 280
14 3300014968 Ga0157379_10016739 Ga0157379_100167395 280
15 3300025913 Ga0207695_10056094 Ga0207695_100560943 280
16 3300048921 Ga0496118_0244452 Ga0496118_0244452_138_992 280
17 3300049744 Ga0501083_0000250 Ga0501083_0000250_24445_25290 280
18 3300005539 Ga0068853_100077613 Ga0068853_1000776132 281
19 3300026041 Ga0207639_10053078 Ga0207639_100530782 281
20 3300048922 Ga0496119_0014946 Ga0496119_0014946_561_1475 281
21 3300048923 Ga0496120_0001306 Ga0496120_0001306_4564_5478 281
22 iso_pu_bacteria 2857733635 2857736904 282
23 iso_pu_bacteria 2844841374 2844841799 283
24 iso_pu_bacteria 2919055335 2919057486 283
25 iso_pu_bacteria 2919523602 2919523852 283
26 iso_pu_bacteria 2928153084 2928156999 283
27 3300005437 Ga0070710_10060220 Ga0070710_100602202 284
28 3300025911 Ga0207654_10251524 Ga0207654_102515242 284
29 iso_pu_bacteria 2966921586 2966921648 284
30 3300044693 Ga0466961_0033771 Ga0466961_0033771_702_1568 285
31 3300044765 Ga0466970_0061369 Ga0466970_0061369_947_1813 285
32 3300049571 Ga0501034_0563495 Ga0501034_0563495_61_933 285
33 iso_pu_bacteria 8055034563 8055037072 285
34 3300005327 Ga0070658_10004717 Ga0070658_100047173 286
35 3300005366 Ga0070659_100070828 Ga0070659_1000708283 286
36 3300005539 Ga0068853_100055709 Ga0068853_1000557092 286
37 3300005563 Ga0068855_100060691 Ga0068855_1000606914 286
38 3300006038 Ga0075365_10030437 Ga0075365_100304374 286
39 3300006038 Ga0075365_10163243 Ga0075365_101632431 286
40 3300006051 Ga0075364_10181603 Ga0075364_101816031 286
41 3300010375 Ga0105239_10087649 Ga0105239_100876493 286
42 3300013102 Ga0157371_10032657 Ga0157371_100326574 286
43 3300013104 Ga0157370_10027753 Ga0157370_100277535 286
44 3300025909 Ga0207705_10000001 Ga0207705_100000011902 286
45 3300025919 Ga0207657_10166671 Ga0207657_101666712 286
46 3300025932 Ga0207690_10125794 Ga0207690_101257941 286
47 3300025949 Ga0207667_10108506 Ga0207667_101085064 286
48 3300026067 Ga0207678_10069748 Ga0207678_100697482 286
49 3300028794 Ga0307515_10105373 Ga0307515_101053733 286
50 3300031649 Ga0307514_10005526 Ga0307514_100055264 286
51 3300041452 Ga0451793_0385551 Ga0451793_0385551_1383_2249 286
52 3300044842 Ga0466957_0149850 Ga0466957_0149850_231_1103 286
53 3300045976 Ga0466967_0061794 Ga0466967_0061794_915_1787 286
54 3300046471 Ga0495650_0001494 Ga0495650_0001494_15024_15914 286
55 3300048920 Ga0496117_0017814 Ga0496117_0017814_3184_4047 286
56 3300049588 Ga0501072_0352524 Ga0501072_0352524_64_939 286
57 3300050491 nmdc:mga00v17_7124_c1 nmdc:mga00v17_7124_c1_1590_2453 286
58 3300050492 nmdc:mga0yw44_8650_c1 nmdc:mga0yw44_8650_c1_730_1593 286
59 3300053080 Ga0500635_0000015 Ga0500635_0000015_62687_63547 286
60 3300053087 Ga0500643_001374 Ga0500643_001374_3718_4581 286
61 3300053104 Ga0500556_0000775 Ga0500556_0000775_6437_7342 286
62 3300053117 Ga0500593_001805 Ga0500593_001805_5647_6552 286
63 3300053136 Ga0500559_0001995 Ga0500559_0001995_2753_3616 286
64 3300053136 Ga0500559_0002152 Ga0500559_0002152_3235_4098 286
65 3300053139 Ga0500568_0000098 Ga0500568_0000098_29010_29873 286
66 3300053140 Ga0500573_0000007 Ga0500573_0000007_121524_122387 286
67 iso_pu_bacteria 2862993130 2862995546 286
68 3300002067 JGI24735J21928_10022647 JGI24735J21928_100226473 287
69 3300002772 JGI25164J39214_1000504 JGI25164J39214_100050421 287
70 3300003214 JGI25165J46597_1000002 JGI25165J46597_100000273 287
71 3300003578 Ga0006562J51391_1037234 Ga0006562J51391_10372345 287
72 3300003578 Ga0006562J51391_1037236 Ga0006562J51391_10372363 287
73 3300005327 Ga0070658_10005308 Ga0070658_100053089 287
74 3300005327 Ga0070658_10008275 Ga0070658_100082755 287
75 3300005338 Ga0068868_100037922 Ga0068868_1000379222 287
76 3300005338 Ga0068868_100066899 Ga0068868_1000668993 287
77 3300005366 Ga0070659_100005170 Ga0070659_1000051706 287
78 3300005435 Ga0070714_100049141 Ga0070714_1000491414 287
79 3300005466 Ga0070685_10050263 Ga0070685_100502632 287
80 3300005539 Ga0068853_100005169 Ga0068853_1000051699 287
81 3300005563 Ga0068855_100003100 Ga0068855_1000031009 287
82 3300005563 Ga0068855_100150096 Ga0068855_1001500963 287
83 3300005563 Ga0068855_100594926 Ga0068855_1005949262 287
84 3300005577 Ga0068857_100006075 Ga0068857_10000607513 287
85 3300005614 Ga0068856_100091903 Ga0068856_1000919032 287
86 3300005614 Ga0068856_100129127 Ga0068856_1001291271 287
87 3300005616 Ga0068852_100005464 Ga0068852_1000054642 287
88 3300005616 Ga0068852_100054571 Ga0068852_1000545714 287
89 3300005834 Ga0068851_10000005 Ga0068851_10000005134 287
90 3300005842 Ga0068858_100000058 Ga0068858_100000058101 287
91 3300009093 Ga0105240_10020926 Ga0105240_100209263 287
92 3300009094 Ga0111539_10397892 Ga0111539_103978922 287
93 3300009098 Ga0105245_10014394 Ga0105245_100143946 287
94 3300009174 Ga0105241_10001714 Ga0105241_100017148 287
95 3300009545 Ga0105237_10000222 Ga0105237_1000022275 287
96 3300009545 Ga0105237_10060526 Ga0105237_100605263 287
97 3300009551 Ga0105238_10003263 Ga0105238_100032634 287
98 3300013105 Ga0157369_10011196 Ga0157369_100111969 287
99 3300013105 Ga0157369_10042910 Ga0157369_100429104 287
100 3300013105 Ga0157369_10195336 Ga0157369_101953362 287
101 3300014325 Ga0163163_10130821 Ga0163163_101308213 287
102 3300020070 Ga0206356_11568970 Ga0206356_115689701 287
103 3300020081 Ga0206354_11147604 Ga0206354_111476042 287
104 3300020082 Ga0206353_10380611 Ga0206353_103806113 287
105 3300025231 Ga0207427_100034 Ga0207427_1000341 287
106 3300025233 Ga0209437_100360 Ga0209437_10036022 287
107 3300025253 Ga0209677_100720 Ga0209677_1007204 287
108 3300025254 Ga0209148_1001534 Ga0209148_100153412 287
109 3300025261 Ga0209233_1000001 Ga0209233_10000012732 287
110 3300025272 Ga0209455_1006472 Ga0209455_10064723 287
111 3300025321 Ga0207656_10000001 Ga0207656_10000001168 287
112 3300025321 Ga0207656_10000003 Ga0207656_10000003274 287
113 3300025321 Ga0207656_10000004 Ga0207656_10000004131 287
114 3300025911 Ga0207654_10000003 Ga0207654_10000003487 287
115 3300025913 Ga0207695_10009229 Ga0207695_100092296 287
116 3300025913 Ga0207695_10075863 Ga0207695_100758633 287
117 3300025914 Ga0207671_10000001 Ga0207671_10000001166 287
118 3300025919 Ga0207657_10012940 Ga0207657_100129403 287
119 3300025920 Ga0207649_10028627 Ga0207649_100286272 287
120 3300025924 Ga0207694_10000039 Ga0207694_10000039154 287
121 3300025927 Ga0207687_10004874 Ga0207687_100048746 287
122 3300025927 Ga0207687_10057553 Ga0207687_100575532 287
123 3300025929 Ga0207664_10130552 Ga0207664_101305524 287
124 3300025932 Ga0207690_10007599 Ga0207690_100075995 287
125 3300025949 Ga0207667_10004729 Ga0207667_1000472917 287
126 3300025949 Ga0207667_10018489 Ga0207667_100184896 287
127 3300025949 Ga0207667_10149776 Ga0207667_101497763 287
128 3300025986 Ga0207658_10040598 Ga0207658_100405983 287
129 3300026023 Ga0207677_10025922 Ga0207677_100259222 287
130 3300026023 Ga0207677_10196452 Ga0207677_101964522 287
131 3300026035 Ga0207703_10002430 Ga0207703_1000243013 287
132 3300026041 Ga0207639_10006099 Ga0207639_100060996 287
133 3300026078 Ga0207702_10112114 Ga0207702_101121142 287
134 3300026078 Ga0207702_10218760 Ga0207702_102187602 287
135 3300026116 Ga0207674_10007419 Ga0207674_1000741913 287
136 3300026116 Ga0207674_10210790 Ga0207674_102107902 287
137 3300026142 Ga0207698_10001435 Ga0207698_1000143511 287
138 3300026142 Ga0207698_10010519 Ga0207698_100105192 287
139 3300037312 Ga0395899_0015660 Ga0395899_0015660_562_1425 287
140 3300044683 Ga0466965_0027016 Ga0466965_0027016_1191_2057 287
141 3300044684 Ga0466966_0075828 Ga0466966_0075828_1213_2079 287
142 3300044694 Ga0466963_0257849 Ga0466963_0257849_195_1070 287
143 3300044765 Ga0466970_0032395 Ga0466970_0032395_274_1140 287
144 3300044901 Ga0466960_0029856 Ga0466960_0029856_1372_2238 287
145 3300045049 Ga0466959_0018620 Ga0466959_0018620_2226_3092 287
146 3300045049 Ga0466959_0211865 Ga0466959_0211865_399_1268 287
147 3300045836 Ga0466958_0045144 Ga0466958_0045144_1728_2594 287
148 3300048905 Ga0496102_0541605 Ga0496102_0541605_20_916 287
149 3300048907 Ga0496104_0276832 Ga0496104_0276832_224_1120 287
150 3300048908 Ga0496105_0018586 Ga0496105_0018586_221_1120 287
151 3300048917 Ga0496114_0207066 Ga0496114_0207066_575_1471 287
152 3300048920 Ga0496117_0057829 Ga0496117_0057829_1172_2035 287
153 3300048925 Ga0496122_0085574 Ga0496122_0085574_105_968 287
154 3300048929 Ga0496126_0006862 Ga0496126_0006862_8254_9189 287
155 3300048929 Ga0496126_0139893 Ga0496126_0139893_141_1037 287
156 3300049569 Ga0501032_0236011 Ga0501032_0236011_193_1065 287
157 3300049578 Ga0501042_0000338 Ga0501042_0000338_5222_6097 287
158 3300049580 Ga0501046_0146716 Ga0501046_0146716_697_1569 287
159 3300049589 Ga0501073_0000150 Ga0501073_0000150_19302_20186 287
160 3300049742 Ga0501080_0065416 Ga0501080_0065416_950_1834 287
161 3300049744 Ga0501083_0032046 Ga0501083_0032046_361_1242 287
162 3300053108 Ga0500562_000370 Ga0500562_000370_7992_8870 287
163 3300053139 Ga0500568_0033335 Ga0500568_0033335_1070_1948 287
164 3300053153 Ga0500616_0000302 Ga0500616_0000302_38717_39598 287
165 3300053155 Ga0500620_000175 Ga0500620_000175_8145_9029 287
166 3300061719 Ga0466962_0048162 Ga0466962_0048162_658_1524 287
167 iso_pu_bacteria 2585428094 2587863192 287
168 iso_pu_bacteria 2643221616 2644095409 287
169 iso_pu_bacteria 2643221649 2644277236 287
170 iso_pu_bacteria 2884763398 2884764781 287

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10576

EndIII_4Fe-2S

Iron-sulfur binding domain of endonuclease III

214

230

0.99

PF00730

HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

56

190

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3n5n-assembly2.cif.gz_Y crystal structure analysis of the catalytic domain and interdomain connector of human muty homologue 0.9291 3 211
1rrs-assembly1.cif.gz_A muty adenine glycosylase in complex with dna containing an abasic site 0.9193 4 223
1rrq-assembly1.cif.gz_A muty adenine glycosylase in complex with dna containing an a:oxog pair 0.9187 4 216
5kn9-assembly1.cif.gz_A muty n-terminal domain in complex with dna containing an intrahelical oxog:a base-pair 0.9103 4 216
4yph-assembly1.cif.gz_A crystal structure of muty bound to its anti-substrate with the disulfide cross-linker reduced 0.9089 3 216
ID Description Score Start End Superfamily
af_P9WQ09_31_141_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9839 18 128 1.10.340.30
af_P9WQ09_31_141_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9753 18 128 1.10.340.30
1kg2A02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9661 18 130 1.10.340.30
1kg2A02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9578 18 130 1.10.340.30
1rrqA02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9535 18 130 1.10.340.30
ID Description Score Start End GO Terms
AF-A0A838SLU0-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.9859 2 216 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051539
AF-A0A399NBZ5-F1-model_v4 deleted 0.9856 3 171
AF-A0A6I4P7G2-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.9852 5 287 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051539
AF-A0A522NSI8-F1-model_v4 A/G-specific adenine glycosylase 0.9849 5 287 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051539
AF-A0A2W4L651-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.9808 5 185 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051536

Feature Viewer

pLDDT pTM Quality
93.95 0.89 High
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Predicted Structure (AlphaFold2)

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