F257201

General Info

Members Datasets Scaffolds Average Seq Length
170 113 340 438

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0484742|Ga0436364_0484742_4953_6413
Length 486
Sequence MAGIQGDRALLDCRIGDGVICAGDPEAAVGERSELDFRGKHVLVIGAKRSGLSATALLVKQGARVRVMDAAALPGDEETKFREMGVPVVLQDAGNVTAEGRDPDVIVLSPGVPVDLPVLESARSRGVPVIGEVELASYFLKGPVIGITGSNGKTTTTALTGHVLKQCGMACQVGGNIGTAVTALIDSSRADQWNVLELSSFQLESIRTFRARISACLNVTPDHLDRHHTFEKYAAAKARLFETQNAEDCAVLNYDDETCRSYARQTRATVYWFSSARRVPSGIWMNGDELFLNDESFLAQSQIKLRGLHNVENVMAAALVAHLAGAAVKQIGAAVESFPGVEHRLEFVREVAGVAYYNDSKATNVDATLKAIDAFPQGLWIILGGKDKGSEYAPLREPLRQRAKAALLIGADPPYPQAAAPLIKEALKDAVPIFECGTLKRAIHYAREHAASGDVVLLAPACASFDQFQNYEERGNAFKQIVADLS

Samples

Sample ID Description Type Environment
1 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
38 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
56 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
57 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
58 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
59 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
60 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
61 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
62 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
63 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
64 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
65 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
66 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
67 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
68 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
69 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
70 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
71 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
72 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
74 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
75 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
76 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
77 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
78 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
79 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
80 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
81 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
82 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
83 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
84 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
85 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
86 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
87 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
99 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
100 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
101 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
102 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
103 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
104 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
105 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
106 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
107 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
108 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
110 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
111 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
112 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
113 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 84.12
Stem 0
Stem Tuber 0
Unclassified 3.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436364_0484742 3300037853 Bacteria 7878
2 Ga0070683_100000106 3300005329 Bacteria 54661
3 Ga0070680_100002396 3300005336 Bacteria 13879
4 Ga0070673_100019123 3300005364 Bacteria 4914
5 Ga0070714_100001641 3300005435 Bacteria 16259
6 Ga0070713_100002415 3300005436 Bacteria 12191
7 Ga0070711_100029530 3300005439 Bacteria 3619
8 Ga0070663_100127973 3300005455 Bacteria 1925
9 Ga0070681_10015661 3300005458 Bacteria 7554
10 Ga0070681_10045126 3300005458 Bacteria 4411
11 Ga0070706_100061348 3300005467 Bacteria 3472
12 Ga0070699_100021354 3300005518 Bacteria 5584
13 Ga0070679_100035734 3300005530 Bacteria 4929
14 Ga0070684_100000083 3300005535 Bacteria 61611
15 Ga0070665_100035618 3300005548 Bacteria 5005
16 Ga0068855_100017561 3300005563 Bacteria 8603
17 Ga0068855_100027145 3300005563 Bacteria 6851
18 Ga0068855_100052791 3300005563 Bacteria 4785
19 Ga0068856_100004036 3300005614 Bacteria 14698
20 Ga0068856_100176829 3300005614 Bacteria 2147
21 Ga0068852_100049971 3300005616 Bacteria 3580
22 Ga0068863_100077895 3300005841 Bacteria 3138
23 Ga0068858_100201639 3300005842 Bacteria 1881
24 Ga0068860_100143356 3300005843 Bacteria 2297
25 Ga0081455_10016594 3300005937 Bacteria 7100
26 Ga0081539_10017245 3300005985 Bacteria 5083
27 Ga0070717_10003373 3300006028 Bacteria 11413
28 Ga0070717_10014174 3300006028 Bacteria 6129
29 Ga0070717_10273931 3300006028 Bacteria 1495
30 Ga0097621_100104314 3300006237 Bacteria 2389
31 Ga0075430_100120728 3300006846 Bacteria 2185
32 Ga0075431_100120750 3300006847 Unclassified 2704
33 Ga0075436_100001666 3300006914 Bacteria 15174
34 Ga0105240_10000350 3300009093 Bacteria 86419
35 Ga0105240_10000425 3300009093 Bacteria 78173
36 Ga0105237_10001342 3300009545 Bacteria 32642
37 Ga0105237_10035992 3300009545 Bacteria 5008
38 Ga0105237_10041341 3300009545 Bacteria 4650
39 Ga0105238_10097583 3300009551 Bacteria 2924
40 Ga0105249_10024433 3300009553 Bacteria 5431
41 Ga0105249_10079967 3300009553 Bacteria 3036
42 Ga0157370_10015127 3300013104 Bacteria 7859
43 Ga0157369_10055585 3300013105 Bacteria 4272
44 Ga0157369_10097581 3300013105 Bacteria 3135
45 Ga0157378_10339114 3300013297 Bacteria 1465
46 Ga0157372_10093074 3300013307 Bacteria 3430
47 Ga0157372_10100852 3300013307 Bacteria 3295
48 Ga0163163_10190372 3300014325 Bacteria 2100
49 Ga0213872_10000413 3300021361 Bacteria 35029
50 Ga0213876_10000778 3300021384 Bacteria 21847
51 Ga0213876_10003749 3300021384 Bacteria 8619
52 Ga0213875_10000018 3300021388 Bacteria 233445
53 Ga0213875_10000027 3300021388 Bacteria 190420
54 Ga0213875_10000992 3300021388 Bacteria 20274
55 Ga0213875_10006695 3300021388 Bacteria 6020
56 Ga0213875_10007081 3300021388 Bacteria 5828
57 Ga0207707_10013379 3300025912 Bacteria 7154
58 Ga0207707_10129038 3300025912 Bacteria 2211
59 Ga0207695_10001593 3300025913 Bacteria 36862
60 Ga0207695_10001984 3300025913 Bacteria 31600
61 Ga0207695_10157896 3300025913 Bacteria 2202
62 Ga0207671_10016572 3300025914 Bacteria 5723
63 Ga0207663_10033864 3300025916 Bacteria 3048
64 Ga0207660_10112170 3300025917 Bacteria 2053
65 Ga0207662_10193662 3300025918 Bacteria 1313
66 Ga0207700_10000345 3300025928 Bacteria 27180
67 Ga0207690_10023312 3300025932 Bacteria 3862
68 Ga0207661_10000054 3300025944 Bacteria 88056
69 Ga0207667_10067085 3300025949 Bacteria 3738
70 Ga0207667_10074241 3300025949 Bacteria 3533
71 Ga0207651_10036512 3300025960 Bacteria 3209
72 Ga0207702_10019002 3300026078 Bacteria 5686
73 Ga0207702_10088899 3300026078 Bacteria 2700
74 Ga0207702_10096178 3300026078 Bacteria 2604
75 Ga0207641_10017264 3300026088 Bacteria 5908
76 Ga0207698_10005337 3300026142 Bacteria 7923
77 Ga0268266_10019832 3300028379 Bacteria 5731
78 Ga0265323_10000122 3300028653 Bacteria 44507
79 Ga0265338_10010827 3300028800 Bacteria 10627
80 Ga0265320_10001694 3300031240 Bacteria 15663
81 Ga0265325_10001054 3300031241 Bacteria 19829
82 Ga0265325_10077076 3300031241 Bacteria 1663
83 Ga0265329_10017607 3300031242 Bacteria 2454
84 Ga0265340_10010939 3300031247 Bacteria 4842
85 Ga0265331_10001396 3300031250 Bacteria 17743
86 Ga0265316_10003163 3300031344 Bacteria 16751
87 Ga0265316_10007324 3300031344 Bacteria 10404
88 Ga0265316_10021292 3300031344 Bacteria 5497
89 Ga0265313_10060063 3300031595 Bacteria 1785
90 Ga0373926_0016310 3300035083 Bacteria 2539
91 Ga0373934_0019688 3300035086 Bacteria 2592
92 Ga0373954_0035149 3300035118 Bacteria 2323
93 Ga0373956_0013195 3300035119 Bacteria 3437
94 Ga0373943_0012579 3300035170 Bacteria 3815
95 Ga0373935_0023255 3300035692 Bacteria 3808
96 Ga0373927_0000596 3300035695 Bacteria 27559
97 Ga0373927_0000845 3300035695 Bacteria 23373
98 Ga0373927_0002063 3300035695 Bacteria 14834
99 Ga0373927_0003551 3300035695 Bacteria 11146
100 Ga0373947_0001478 3300035725 Bacteria 14451
101 Ga0373937_0020849 3300036401 Bacteria 5878
102 Ga0373925_0000163 3300037068 Bacteria 71614
103 Ga0373925_0050643 3300037068 Bacteria 3098
104 Ga0436364_0207308 3300037853 Bacteria 4290
105 Ga0436364_0239259 3300037853 Bacteria 47780
106 Ga0436364_0382316 3300037853 Unclassified 1442
107 Ga0436364_0427138 3300037853 Bacteria 2173
108 Ga0436364_0446012 3300037853 Bacteria 193523
109 Ga0436364_0710305 3300037853 Bacteria 4095
110 Ga0436364_0919480 3300037853 Bacteria 92155
111 Ga0436364_1127946 3300037853 Bacteria 5041
112 Ga0436364_1129913 3300037853 Bacteria 3574
113 Ga0436364_1157957 3300037853 Bacteria 3022
114 Ga0436364_1238290 3300037853 Bacteria 5784
115 Ga0436364_1448685 3300037853 Bacteria 6371
116 Ga0436365_0515539 3300039437 Unclassified 2540
117 Ga0436365_0935835 3300039437 Bacteria 2493
118 Ga0436365_1206460 3300039437 Bacteria 5044
119 Ga0436365_1893764 3300039437 Bacteria 7634
120 Ga0436360_1231523 3300039438 Bacteria 27021
121 Ga0436361_0567168 3300039447 Bacteria 164343
122 Ga0436363_0314269 3300039450 Bacteria 13293
123 Ga0436363_0620088 3300039450 Bacteria 2425
124 Ga0466958_0103689 3300045836 Unclassified 1771
125 Ga0495580_0000951 3300046472 Bacteria 25325
126 Ga0495586_0037475 3300046535 Bacteria 2604
127 Ga0495634_0051058 3300046642 Bacteria 2776
128 Ga0495658_0025376 3300046683 Bacteria 3167
129 Ga0495624_0046425 3300046690 Bacteria 2761
130 Ga0495674_0092596 3300047319 Bacteria 2580
131 Ga0495684_0064789 3300047471 Bacteria 2777
132 Ga0496126_0028631 3300048929 Bacteria 5306
133 Ga0501031_0003270 3300049568 Bacteria 10410
134 Ga0501032_0005778 3300049569 Bacteria 9154
135 Ga0501033_0001456 3300049570 Bacteria 20986
136 Ga0501033_0031565 3300049570 Bacteria 3980
137 Ga0501034_0010546 3300049571 Bacteria 9620
138 Ga0501034_0113111 3300049571 Bacteria 2704
139 Ga0501036_0001567 3300049572 Bacteria 17668
140 Ga0501037_0001922 3300049573 Bacteria 15066
141 Ga0501037_0155858 3300049573 Bacteria 1630
142 Ga0501038_0175472 3300049574 Bacteria 1732
143 Ga0501039_0005541 3300049575 Bacteria 9552
144 Ga0501043_0001595 3300049579 Bacteria 19718
145 Ga0501043_0018649 3300049579 Bacteria 5446
146 Ga0501046_0001180 3300049580 Bacteria 25412
147 Ga0501047_0026273 3300049581 Bacteria 5601
148 Ga0501047_0082429 3300049581 Bacteria 3091
149 Ga0501047_0120274 3300049581 Bacteria 2508
150 Ga0501067_0003807 3300049583 Bacteria 8323
151 Ga0501068_0001663 3300049584 Bacteria 11882
152 Ga0501069_0002188 3300049585 Bacteria 9838
153 Ga0501070_0003236 3300049586 Bacteria 14159
154 Ga0501070_0013560 3300049586 Bacteria 6870
155 Ga0501072_0028342 3300049588 Bacteria 4372
156 Ga0501073_0000401 3300049589 Bacteria 29549
157 Ga0501077_0001827 3300049593 Bacteria 12870
158 Ga0501079_0001352 3300049741 Bacteria 17254
159 Ga0501080_0000034 3300049742 Bacteria 85093
160 Ga0501083_0009284 3300049744 Bacteria 6942
161 Ga0501035_0099305 3300049822 Bacteria 2555
162 Ga0501035_0141485 3300049822 Unclassified 2091
163 Ga0501044_0001256 3300049823 Bacteria 29994
164 Ga0501044_0010974 3300049823 Bacteria 9834
165 Ga0501044_0079700 3300049823 Bacteria 3318
166 nmdc:mga06r32_109989_c1 3300050510 Unclassified 2710
167 nmdc:mga08x19_32494_c1 3300050514 Bacteria 3290
168 Ga0501084_0000460 3300054114 Bacteria 31414
169 Ga0501082_0000581 3300060353 Bacteria 32431
170 Ga0501082_0024384 3300060353 Bacteria 5215
171 Ga0436364_0484742
172 Ga0070683_100000106
173 Ga0070680_100002396
174 Ga0070673_100019123
175 Ga0070714_100001641
176 Ga0070713_100002415
177 Ga0070711_100029530
178 Ga0070663_100127973
179 Ga0070681_10015661
180 Ga0070681_10045126
181 Ga0070706_100061348
182 Ga0070699_100021354
183 Ga0070679_100035734
184 Ga0070684_100000083
185 Ga0070665_100035618
186 Ga0068855_100017561
187 Ga0068855_100027145
188 Ga0068855_100052791
189 Ga0068856_100004036
190 Ga0068856_100176829
191 Ga0068852_100049971
192 Ga0068863_100077895
193 Ga0068858_100201639
194 Ga0068860_100143356
195 Ga0081455_10016594
196 Ga0081539_10017245
197 Ga0070717_10003373
198 Ga0070717_10014174
199 Ga0070717_10273931
200 Ga0097621_100104314
201 Ga0075430_100120728
202 Ga0075431_100120750
203 Ga0075436_100001666
204 Ga0105240_10000350
205 Ga0105240_10000425
206 Ga0105237_10001342
207 Ga0105237_10035992
208 Ga0105237_10041341
209 Ga0105238_10097583
210 Ga0105249_10024433
211 Ga0105249_10079967
212 Ga0157370_10015127
213 Ga0157369_10055585
214 Ga0157369_10097581
215 Ga0157378_10339114
216 Ga0157372_10093074
217 Ga0157372_10100852
218 Ga0163163_10190372
219 Ga0213872_10000413
220 Ga0213876_10000778
221 Ga0213876_10003749
222 Ga0213875_10000018
223 Ga0213875_10000027
224 Ga0213875_10000992
225 Ga0213875_10006695
226 Ga0213875_10007081
227 Ga0207707_10013379
228 Ga0207707_10129038
229 Ga0207695_10001593
230 Ga0207695_10001984
231 Ga0207695_10157896
232 Ga0207671_10016572
233 Ga0207663_10033864
234 Ga0207660_10112170
235 Ga0207662_10193662
236 Ga0207700_10000345
237 Ga0207690_10023312
238 Ga0207661_10000054
239 Ga0207667_10067085
240 Ga0207667_10074241
241 Ga0207651_10036512
242 Ga0207702_10019002
243 Ga0207702_10088899
244 Ga0207702_10096178
245 Ga0207641_10017264
246 Ga0207698_10005337
247 Ga0268266_10019832
248 Ga0265323_10000122
249 Ga0265338_10010827
250 Ga0265320_10001694
251 Ga0265325_10001054
252 Ga0265325_10077076
253 Ga0265329_10017607
254 Ga0265340_10010939
255 Ga0265331_10001396
256 Ga0265316_10003163
257 Ga0265316_10007324
258 Ga0265316_10021292
259 Ga0265313_10060063
260 Ga0373926_0016310
261 Ga0373934_0019688
262 Ga0373954_0035149
263 Ga0373956_0013195
264 Ga0373943_0012579
265 Ga0373935_0023255
266 Ga0373927_0000596
267 Ga0373927_0000845
268 Ga0373927_0002063
269 Ga0373927_0003551
270 Ga0373947_0001478
271 Ga0373937_0020849
272 Ga0373925_0000163
273 Ga0373925_0050643
274 Ga0436364_0207308
275 Ga0436364_0239259
276 Ga0436364_0382316
277 Ga0436364_0427138
278 Ga0436364_0446012
279 Ga0436364_0710305
280 Ga0436364_0919480
281 Ga0436364_1127946
282 Ga0436364_1129913
283 Ga0436364_1157957
284 Ga0436364_1238290
285 Ga0436364_1448685
286 Ga0436365_0515539
287 Ga0436365_0935835
288 Ga0436365_1206460
289 Ga0436365_1893764
290 Ga0436360_1231523
291 Ga0436361_0567168
292 Ga0436363_0314269
293 Ga0436363_0620088
294 Ga0466958_0103689
295 Ga0495580_0000951
296 Ga0495586_0037475
297 Ga0495634_0051058
298 Ga0495658_0025376
299 Ga0495624_0046425
300 Ga0495674_0092596
301 Ga0495684_0064789
302 Ga0496126_0028631
303 Ga0501031_0003270
304 Ga0501032_0005778
305 Ga0501033_0001456
306 Ga0501033_0031565
307 Ga0501034_0010546
308 Ga0501034_0113111
309 Ga0501036_0001567
310 Ga0501037_0001922
311 Ga0501037_0155858
312 Ga0501038_0175472
313 Ga0501039_0005541
314 Ga0501043_0001595
315 Ga0501043_0018649
316 Ga0501046_0001180
317 Ga0501047_0026273
318 Ga0501047_0082429
319 Ga0501047_0120274
320 Ga0501067_0003807
321 Ga0501068_0001663
322 Ga0501069_0002188
323 Ga0501070_0003236
324 Ga0501070_0013560
325 Ga0501072_0028342
326 Ga0501073_0000401
327 Ga0501077_0001827
328 Ga0501079_0001352
329 Ga0501080_0000034
330 Ga0501083_0009284
331 Ga0501035_0099305
332 Ga0501035_0141485
333 Ga0501044_0001256
334 Ga0501044_0010974
335 Ga0501044_0079700
336 nmdc:mga06r32_109989_c1
337 nmdc:mga08x19_32494_c1
338 Ga0501084_0000460
339 Ga0501082_0000581
340 Ga0501082_0024384

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

343

462

0.91

PF08245

Mur_ligase_M

Mur ligase middle domain

147

321

0.83

PF21799

MurD-like_N

Mur ligase MurD-like, N-terminal domain

40

131

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j33-assembly1.cif.gz_A crystal structure of kynurenine 3-monooxygenase (kmo-394) 0.9503 5 38
5x6r-assembly1.cif.gz_A crystal structure of saccharomyces cerevisiae kmo in complex with ro 61-8048 0.9485 5 38
2vvl-assembly4.cif.gz_G the structure of mao-n-d3, a variant of monoamine oxidase from aspergillus niger. 0.9307 6 35
2vvl-assembly1.cif.gz_E the structure of mao-n-d3, a variant of monoamine oxidase from aspergillus niger. 0.9267 6 35
3int-assembly3.cif.gz_B structure of udp-galactopyranose mutase bound to udp-galactose (reduced) 0.9149 4 37
ID Description Score Start End Superfamily
3lk7A02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9666 92 297 3.40.1190.10
3lk7A02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9572 92 297 3.40.1190.10
af_Q2FZ92_101_311_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9539 92 303 3.40.1190.10
af_Q2FZ92_101_311_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9452 92 303 3.40.1190.10
3lk7A03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9294 303 436 3.90.190.20
ID Description Score Start End GO Terms
AF-A0A359E2J3-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 0.9817 309 437 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301
AF-X1KLX4-F1-model_v4 Mur ligase central domain-containing protein 0.9758 167 251 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301
AF-A0A1F4X602-F1-model_v4 UDP-N-acetylmuramoylalanine--D-glutamate ligase 0.9701 2 295 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009252
GO:0051301
AF-A0A359E2J3-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 0.9669 309 437 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301
AF-A0A7Y2A6M6-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 0.9638 303 437 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301

Map