F256987

General Info

Members Datasets Scaffolds Average Seq Length
170 93 340 785

Family's Representative Sequence

Representative Sequence 3300028016|Ga0265354_1000537|Ga0265354_10005373
Length 868
Sequence MSTQSVKENNGSLNPALPPEVMSVGSSVTDIQKSWLSSALSLIADKYRETRASPAPKRQKQNLSWPAASFILLQVVVGLPLLPYALLHWNPENQLRFACFFGVALAASLFKVRLPGIEATMSANFLFILVGILDLSYPETLLMGCFGGLVQSIWQSKPRPRLTQILFNFANLSISITAANLVFHSRAASHLGLGWPLLLVSASTTYFAINTMSVSGIIALTQKRNPLLVWKECYLWSFPYYLLGAMIAGGISLINRAFGWQFAILVLPLVYWMYRSYRIYLDRLEAEKKHTEEIADLHLRTIEALSLAIEAKDHSTHDHLRRVQTYAVQLGKDLGLTDAELNALRAASMLHDIGKLAVPEQILSKPGRLTPEEFDRMKIHPIVGAEILDRVQFPYPVVPIVRSHHEKWDGSGYPYGLKREAIPIGARILSVVDCFDALTSERPYRRAMSADEAMKHLVSEIDTSFDPRVVAAIEKRYVELEQGVRRSETTKSPFPTVTNANRSVAPSAGFADVPNAAEVRATSFLASIVSARQEAQLLFELAQTLGNSLSLRETLSVVAIRLKEMIPYDLIVFYVCQDQKLVPRYVHGVDYDLFRSLEMPIGQGISGWVAQNKKPIINGDPMAESKHLGDPTRVSVLRSTLSIPLQGRDGVAGVLTLYLKEKQAFTKDHLRMLMAASSKLGLSVENSLQFEKAQDSASTDFLTGLPNARSICAHLDTELARSERSGQPLAVLLCDLNGFKTVNDNFGHLVGNKLLEEIARNFRTVCREYDLVGRLGGDEFVLVLPEFTTTTVRELLPRIELAVVEAGRVVCGKKVVTVSVGAAFYPQNGVTAEELLSEADRGMYEAKESHYREKGVPAVPQLVVPSPG

Samples

Sample ID Description Type Environment
1 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
38 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
51 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
67 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
68 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
69 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
70 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
71 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
72 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
73 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
74 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
75 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
76 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
78 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
79 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
80 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
81 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
82 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
83 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
84 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
85 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
86 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
87 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
88 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
89 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
90 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
91 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
92 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
93 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.47
Nodule 0
Rhizoplane 1.18
Rhizosphere 91.18
Stem 0
Stem Tuber 0
Unclassified 14.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265354_1000537 3300028016 Bacteria 6524
2 JGI25406J46586_10003427 3300003203 Bacteria 7460
3 Ga0065712_10067909 3300005290 Bacteria 21602
4 Ga0065712_10073263 3300005290 Bacteria 4439
5 Ga0065715_10001222 3300005293 Bacteria 12023
6 Ga0065715_10109250 3300005293 Bacteria 2676
7 Ga0070690_100007022 3300005330 Bacteria 6420
8 Ga0070666_10007339 3300005335 Bacteria 6793
9 Ga0070687_100013524 3300005343 Unclassified 3639
10 Ga0070692_10006451 3300005345 Bacteria 5094
11 Ga0070694_100007520 3300005444 Bacteria 6648
12 Ga0070707_100051005 3300005468 Bacteria 3966
13 Ga0070698_100028889 3300005471 Bacteria 5757
14 Ga0070699_100013108 3300005518 Bacteria 7145
15 Ga0070699_100014174 3300005518 Bacteria 6859
16 Ga0070679_100002774 3300005530 Bacteria 15918
17 Ga0070697_100000096 3300005536 Bacteria 73635
18 Ga0070697_100040021 3300005536 Bacteria 3791
19 Ga0070697_100061171 3300005536 Unclassified 3071
20 Ga0070696_100012395 3300005546 Bacteria 5720
21 Ga0070665_100005072 3300005548 Bacteria 13665
22 Ga0070665_100101415 3300005548 Bacteria 2882
23 Ga0070704_100040175 3300005549 Bacteria 3218
24 Ga0068864_100097054 3300005618 Bacteria 2609
25 Ga0068861_100006252 3300005719 Bacteria 8101
26 Ga0068858_100066092 3300005842 Unclassified 3347
27 Ga0081539_10000201 3300005985 Bacteria 138553
28 Ga0081539_10014966 3300005985 Bacteria 5687
29 Ga0075364_10021714 3300006051 Bacteria 4047
30 Ga0070716_100001762 3300006173 Bacteria 9784
31 Ga0075367_10014156 3300006178 Unclassified 4312
32 Ga0075366_10016594 3300006195 Unclassified 4235
33 Ga0075366_10031376 3300006195 Bacteria 3127
34 Ga0097621_100021167 3300006237 Bacteria 5024
35 Ga0097621_100026852 3300006237 Unclassified 4522
36 Ga0068871_100017692 3300006358 Bacteria 5400
37 Ga0068871_100023250 3300006358 Unclassified 4791
38 Ga0075428_100023855 3300006844 Bacteria 6769
39 Ga0075428_100064368 3300006844 Bacteria 4015
40 Ga0075430_100013314 3300006846 Bacteria 7011
41 Ga0075430_100026825 3300006846 Bacteria 4899
42 Ga0075431_100035100 3300006847 Bacteria 5165
43 Ga0075431_100045622 3300006847 Bacteria 4519
44 Ga0075431_100057408 3300006847 Bacteria 4015
45 Ga0075431_100066471 3300006847 Bacteria 3722
46 Ga0075433_10024459 3300006852 Bacteria 5098
47 Ga0075433_10028349 3300006852 Bacteria 4759
48 Ga0075433_10079562 3300006852 Bacteria 2888
49 Ga0075434_100000633 3300006871 Bacteria 27175
50 Ga0075434_100030023 3300006871 Bacteria 5351
51 Ga0075434_100045817 3300006871 Bacteria 4339
52 Ga0075434_100092409 3300006871 Bacteria 3028
53 Ga0075429_100015487 3300006880 Bacteria 6608
54 Ga0075429_100062224 3300006880 Bacteria 3252
55 Ga0068865_100017491 3300006881 Bacteria 4611
56 Ga0075436_100001697 3300006914 Bacteria 15078
57 Ga0075436_100002836 3300006914 Bacteria 11872
58 Ga0075436_100008017 3300006914 Bacteria 7231
59 Ga0075436_100010852 3300006914 Bacteria 6250
60 Ga0075436_100015837 3300006914 Bacteria 5163
61 Ga0075436_100022086 3300006914 Unclassified 4370
62 Ga0075436_100033543 3300006914 Unclassified 3539
63 Ga0075436_100051381 3300006914 Bacteria 2845
64 Ga0075435_100000285 3300007076 Bacteria 31543
65 Ga0075435_100019577 3300007076 Bacteria 5173
66 Ga0075435_100020510 3300007076 Bacteria 5066
67 Ga0075435_100022986 3300007076 Bacteria 4814
68 Ga0099794_10001359 3300007265 Bacteria 8500
69 Ga0099794_10005652 3300007265 Bacteria 5034
70 Ga0099794_10006299 3300007265 Bacteria 4795
71 Ga0099794_10022611 3300007265 Unclassified 2868
72 Ga0099795_10008723 3300007788 Bacteria 2907
73 Ga0111539_10000235 3300009094 Bacteria 66044
74 Ga0111539_10000956 3300009094 Bacteria 37902
75 Ga0111539_10018333 3300009094 Bacteria 8670
76 Ga0111539_10057793 3300009094 Unclassified 4605
77 Ga0105247_10042779 3300009101 Unclassified 2775
78 Ga0114129_10022516 3300009147 Bacteria 8940
79 Ga0114129_10034587 3300009147 Bacteria 7138
80 Ga0114129_10034944 3300009147 Bacteria 7100
81 Ga0114129_10049765 3300009147 Bacteria 5888
82 Ga0114129_10053223 3300009147 Bacteria 5677
83 Ga0114129_10095296 3300009147 Bacteria 4122
84 Ga0114129_10129718 3300009147 Unclassified 3464
85 Ga0114129_10156395 3300009147 Bacteria 3117
86 Ga0105243_10025726 3300009148 Unclassified 4501
87 Ga0105241_10014445 3300009174 Bacteria 5782
88 Ga0105242_10026702 3300009176 Unclassified 4578
89 Ga0105242_10029408 3300009176 Bacteria 4382
90 Ga0105242_10077104 3300009176 Bacteria 2780
91 Ga0105248_10053335 3300009177 Unclassified 4537
92 Ga0105248_10066964 3300009177 Bacteria 4032
93 Ga0105248_10081939 3300009177 Viruses 3628
94 Ga0105246_10031983 3300011119 Bacteria 3485
95 Ga0157375_10041439 3300013308 Bacteria 4446
96 Ga0163163_10029317 3300014325 Bacteria 5293
97 Ga0157376_10011846 3300014969 Bacteria 6447
98 Ga0213875_10020397 3300021388 Unclassified 3179
99 Ga0207697_10003134 3300025315 Bacteria 8252
100 Ga0207688_10002858 3300025901 Bacteria 9380
101 Ga0207645_10039276 3300025907 Unclassified 3033
102 Ga0207704_10006766 3300025938 Bacteria 5371
103 Ga0207704_10018735 3300025938 Unclassified 3621
104 Ga0207665_10002952 3300025939 Bacteria 11397
105 Ga0207711_10061289 3300025941 Bacteria 3244
106 Ga0207661_10022127 3300025944 Bacteria 4781
107 Ga0207703_10004608 3300026035 Bacteria 11281
108 Ga0207641_10027868 3300026088 Unclassified 4666
109 Ga0207648_10008813 3300026089 Bacteria 9718
110 Ga0207676_10007316 3300026095 Bacteria 7828
111 Ga0207675_100003978 3300026118 Bacteria 14335
112 Ga0207675_100058316 3300026118 Bacteria 3603
113 Ga0209588_1000681 3300027671 Bacteria 8547
114 Ga0207428_10003371 3300027907 Bacteria 15530
115 Ga0207428_10007003 3300027907 Bacteria 10325
116 Ga0207428_10023936 3300027907 Bacteria 5129
117 Ga0207428_10029308 3300027907 Bacteria 4563
118 Ga0268266_10018738 3300028379 Bacteria 5897
119 Ga0307408_100059044 3300031548 Bacteria 2791
120 Ga0373926_0000625 3300035083 Bacteria 9614
121 Ga0373941_0000216 3300035115 Bacteria 11056
122 Ga0373961_0000845 3300035241 Bacteria 10337
123 Ga0373927_0000268 3300035695 Bacteria 41100
124 Ga0373925_0000172 3300037068 Bacteria 70000
125 Ga0373925_0009480 3300037068 Bacteria 7088
126 Ga0436364_1343295 3300037853 Bacteria 10293
127 Ga0451577_0034915 3300042876 Bacteria 4531
128 Ga0495630_0009916 3300046517 Bacteria 6860
129 Ga0496112_0012913 3300048915 Bacteria 7693
130 Ga0496112_0014666 3300048915 Bacteria 7283
131 Ga0501041_0021716 3300049577 Bacteria 3844
132 Ga0501071_0062983 3300049587 Bacteria 2688
133 Ga0501076_0018161 3300049592 Bacteria 5357
134 Ga0501045_0012514 3300049824 Bacteria 5976
135 nmdc:mga00v17_14401_c1 3300050491 Unclassified 4413
136 nmdc:mga00v17_2656_c1 3300050491 Bacteria 9165
137 nmdc:mga0k408_16341_c1 3300050493 Bacteria 4118
138 nmdc:mga0k408_28568_c1 3300050493 Bacteria 3171
139 nmdc:mga0k408_7665_c2 3300050493 Unclassified 4096
140 nmdc:mga06z11_20739_c1 3300050494 Bacteria 3042
141 nmdc:mga07m45_13660_c1 3300050496 Bacteria 4312
142 nmdc:mga05p37_114747_c1 3300050507 Bacteria 3311
143 nmdc:mga05p37_1535_c1 3300050507 Bacteria 26839
144 nmdc:mga05p37_20154_c1 3300050507 Bacteria 8069
145 nmdc:mga05p37_33113_c1 3300050507 Bacteria 6329
146 nmdc:mga05p37_46661_c1 3300050507 Bacteria 5326
147 nmdc:mga09592_23953_c1 3300050508 Bacteria 5046
148 nmdc:mga0qj67_3523_c1 3300050509 Bacteria 11300
149 nmdc:mga0qj67_45708_c1 3300050509 Bacteria 3455
150 nmdc:mga0qj67_56187_c1 3300050509 Bacteria 3120
151 nmdc:mga06r32_3329_c1 3300050510 Bacteria 14400
152 nmdc:mga06r32_37333_c1 3300050510 Bacteria 4596
153 nmdc:mga06r32_54090_c1 3300050510 Bacteria 3849
154 nmdc:mga08y16_16397_c1 3300050511 Bacteria 7791
155 nmdc:mga08y16_17483_c1 3300050511 Bacteria 7551
156 nmdc:mga08y16_34014_c1 3300050511 Bacteria 5354
157 nmdc:mga08y16_384_c1 3300050511 Bacteria 40430
158 nmdc:mga08y16_48444_c1 3300050511 Bacteria 4447
159 nmdc:mga0n895_11_c1 3300050512 Bacteria 112540
160 nmdc:mga0n895_22457_c1 3300050512 Bacteria 5916
161 nmdc:mga0n895_37175_c1 3300050512 Unclassified 4709
162 nmdc:mga0rr50_12890_c1 3300050513 Bacteria 5421
163 nmdc:mga0rr50_19_c1 3300050513 Bacteria 158236
164 nmdc:mga08x19_1104_c1 3300050514 Bacteria 16817
165 nmdc:mga08x19_1370_c1 3300050514 Bacteria 15085
166 nmdc:mga08x19_27733_c1 3300050514 Unclassified 3543
167 nmdc:mga08x19_29187_c1 3300050514 Bacteria 3459
168 nmdc:mga0a205_29054_c1 3300050515 Bacteria 5290
169 nmdc:mga0a205_93078_c1 3300050515 Bacteria 2912
170 Ga0501084_0026999 3300054114 Bacteria 4797
171 Ga0265354_1000537
172 JGI25406J46586_10003427
173 Ga0065712_10067909
174 Ga0065712_10073263
175 Ga0065715_10001222
176 Ga0065715_10109250
177 Ga0070690_100007022
178 Ga0070666_10007339
179 Ga0070687_100013524
180 Ga0070692_10006451
181 Ga0070694_100007520
182 Ga0070707_100051005
183 Ga0070698_100028889
184 Ga0070699_100013108
185 Ga0070699_100014174
186 Ga0070679_100002774
187 Ga0070697_100000096
188 Ga0070697_100040021
189 Ga0070697_100061171
190 Ga0070696_100012395
191 Ga0070665_100005072
192 Ga0070665_100101415
193 Ga0070704_100040175
194 Ga0068864_100097054
195 Ga0068861_100006252
196 Ga0068858_100066092
197 Ga0081539_10000201
198 Ga0081539_10014966
199 Ga0075364_10021714
200 Ga0070716_100001762
201 Ga0075367_10014156
202 Ga0075366_10016594
203 Ga0075366_10031376
204 Ga0097621_100021167
205 Ga0097621_100026852
206 Ga0068871_100017692
207 Ga0068871_100023250
208 Ga0075428_100023855
209 Ga0075428_100064368
210 Ga0075430_100013314
211 Ga0075430_100026825
212 Ga0075431_100035100
213 Ga0075431_100045622
214 Ga0075431_100057408
215 Ga0075431_100066471
216 Ga0075433_10024459
217 Ga0075433_10028349
218 Ga0075433_10079562
219 Ga0075434_100000633
220 Ga0075434_100030023
221 Ga0075434_100045817
222 Ga0075434_100092409
223 Ga0075429_100015487
224 Ga0075429_100062224
225 Ga0068865_100017491
226 Ga0075436_100001697
227 Ga0075436_100002836
228 Ga0075436_100008017
229 Ga0075436_100010852
230 Ga0075436_100015837
231 Ga0075436_100022086
232 Ga0075436_100033543
233 Ga0075436_100051381
234 Ga0075435_100000285
235 Ga0075435_100019577
236 Ga0075435_100020510
237 Ga0075435_100022986
238 Ga0099794_10001359
239 Ga0099794_10005652
240 Ga0099794_10006299
241 Ga0099794_10022611
242 Ga0099795_10008723
243 Ga0111539_10000235
244 Ga0111539_10000956
245 Ga0111539_10018333
246 Ga0111539_10057793
247 Ga0105247_10042779
248 Ga0114129_10022516
249 Ga0114129_10034587
250 Ga0114129_10034944
251 Ga0114129_10049765
252 Ga0114129_10053223
253 Ga0114129_10095296
254 Ga0114129_10129718
255 Ga0114129_10156395
256 Ga0105243_10025726
257 Ga0105241_10014445
258 Ga0105242_10026702
259 Ga0105242_10029408
260 Ga0105242_10077104
261 Ga0105248_10053335
262 Ga0105248_10066964
263 Ga0105248_10081939
264 Ga0105246_10031983
265 Ga0157375_10041439
266 Ga0163163_10029317
267 Ga0157376_10011846
268 Ga0213875_10020397
269 Ga0207697_10003134
270 Ga0207688_10002858
271 Ga0207645_10039276
272 Ga0207704_10006766
273 Ga0207704_10018735
274 Ga0207665_10002952
275 Ga0207711_10061289
276 Ga0207661_10022127
277 Ga0207703_10004608
278 Ga0207641_10027868
279 Ga0207648_10008813
280 Ga0207676_10007316
281 Ga0207675_100003978
282 Ga0207675_100058316
283 Ga0209588_1000681
284 Ga0207428_10003371
285 Ga0207428_10007003
286 Ga0207428_10023936
287 Ga0207428_10029308
288 Ga0268266_10018738
289 Ga0307408_100059044
290 Ga0373926_0000625
291 Ga0373941_0000216
292 Ga0373961_0000845
293 Ga0373927_0000268
294 Ga0373925_0000172
295 Ga0373925_0009480
296 Ga0436364_1343295
297 Ga0451577_0034915
298 Ga0495630_0009916
299 Ga0496112_0012913
300 Ga0496112_0014666
301 Ga0501041_0021716
302 Ga0501071_0062983
303 Ga0501076_0018161
304 Ga0501045_0012514
305 nmdc:mga00v17_14401_c1
306 nmdc:mga00v17_2656_c1
307 nmdc:mga0k408_16341_c1
308 nmdc:mga0k408_28568_c1
309 nmdc:mga0k408_7665_c2
310 nmdc:mga06z11_20739_c1
311 nmdc:mga07m45_13660_c1
312 nmdc:mga05p37_114747_c1
313 nmdc:mga05p37_1535_c1
314 nmdc:mga05p37_20154_c1
315 nmdc:mga05p37_33113_c1
316 nmdc:mga05p37_46661_c1
317 nmdc:mga09592_23953_c1
318 nmdc:mga0qj67_3523_c1
319 nmdc:mga0qj67_45708_c1
320 nmdc:mga0qj67_56187_c1
321 nmdc:mga06r32_3329_c1
322 nmdc:mga06r32_37333_c1
323 nmdc:mga06r32_54090_c1
324 nmdc:mga08y16_16397_c1
325 nmdc:mga08y16_17483_c1
326 nmdc:mga08y16_34014_c1
327 nmdc:mga08y16_384_c1
328 nmdc:mga08y16_48444_c1
329 nmdc:mga0n895_11_c1
330 nmdc:mga0n895_22457_c1
331 nmdc:mga0n895_37175_c1
332 nmdc:mga0rr50_12890_c1
333 nmdc:mga0rr50_19_c1
334 nmdc:mga08x19_1104_c1
335 nmdc:mga08x19_1370_c1
336 nmdc:mga08x19_27733_c1
337 nmdc:mga08x19_29187_c1
338 nmdc:mga0a205_29054_c1
339 nmdc:mga0a205_93078_c1
340 Ga0501084_0026999

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13487

HD_5

HD domain

303

469

0.97

PF00990

GGDEF

Diguanylate cyclase, GGDEF domain

697

853

0.95

PF01966

HD

HD domain

316

438

0.95

PF01590

GAF

GAF domain

550

684

0.88

PF13185

GAF_2

GAF domain

548

685

0.81

PF13492

GAF_3

GAF domain

550

686

0.79

Map