F255716
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 169 | 140 | 161 | 1025 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2738541307|2738881583 |
| Length | 1059 |
| Sequence | LIAFSLTQRVFVLVLVAALVGFGAYALSNLPIEAFPDVQDVQVRVISQLPGQAPEDMERTVTLPIEREVSGIPKLSNVRSVTMTGLSIVTLTFADGTDDYFARQQVTEKLSTVSLPTGVQPQLAPLSTAVGEVYRYTIEGGGLSDAQMRTLQDWTVRPFLRMTPGVADVVSFGGAITEYQIEVDPLALRKYQVTLDQLNQAVGNGNGSAGGGLMRQGDASLVVRSAGLFASLADIRNVVIASRQGRAISVADVAEVRAGVRPRFGIVAVDARDSVVEGIVSMTKGGNPAKINAELKARVAQLQGKLPPGVRIVPVYDRTELVRHTVSTVAENLVVGALLVMAVLIVFLSSWRAALIVATVIPLALLFAFILMNARGVSANLISLGAVDFGIIIDSAVVIVEALMVRLAARKVSEFGMADLASGAARHQRMGVLHRTLGELAHPVLFSKAIIILAFVPIFTFQRVEGKIFTPVALTLSFALLGAVLLTFTLLPTLLSYALQRGTLAEKHKPWLDWLQLRYRRLVMFTMRRGRATLTLSALPVVLALLLAPRLGSEFLPKLDEGNIWLTITLPTSAALETTQEVEHAVRARLLGYPEVARVIAQVGRPDDGSDPKGPNNLEILVDLKPRDQWRFESKDALVASMSAKLEAIPGISANFSQVIQDNVEEALSGFRGEIVAKIIGNNLDILDDKGAQVAAVIKGIRGASDVDATRIGGQTEVVVTPDRARLARYGLAINDVNTLVNEAMSGTSVTGFYDGDKRFDVVVRVGEKHRNSVDAIAGLQLALPGTQSGNGPGTIALGDVASIEVREGASRIFREAGSRMVIVKVNLLGRDQGSFVEEAQRTVAEQVKLPPGYELAWGGQFENSQRAAKRLMVIVPLTALLIFSLLFWAFRSVRLAGLVLGMIPFTLVGGLAALGLAGLHLSVSAAVGFIAVAGISVQNGVILVEEVTQRVRDGAAVTRAIVEGAAVRLRPILMTALMAGLGLLPAALSHGIGSETQRPFACVIVGGIVSGTLFTLLVLPLAIWLFGNFYDEAQDVQDVRGMQDAPDASAVQLPEGAR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2513237165 | Cupriavidus neocaledonicus STM6070 | Isolate | Nodule |
| 2 | 2547132512 | Azospira oryzae 6a3 | Isolate | Unclassified |
| 3 | 2738541307 | Variovorax sp. GV008 | Isolate | Unclassified |
| 4 | 2818991446 | Variovorax sp. 1180 | Isolate | Unclassified |
| 5 | 2857553236 | Duganella sp. R-74557 | Isolate | Unclassified |
| 6 | 2899924645 | Variovorax sp. 369 | Isolate | Unclassified |
| 7 | 2928051484 | Variovorax sp. 1133 | Isolate | Unclassified |
| 8 | 2928064002 | Variovorax sp. 1140 | Isolate | Rhizosphere |
| 9 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 10 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 11 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 12 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 13 | 3300003759 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 | Metagenome | Endosphere |
| 14 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 15 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 17 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 21 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 24 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 25 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 26 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 28 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 29 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 30 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 31 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 32 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 33 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 34 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 35 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 36 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 45 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 46 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 47 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 49 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 50 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 80 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 81 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 82 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 83 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 84 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 85 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 86 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 87 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 88 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 89 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 90 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 91 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 92 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 93 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 94 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 95 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 96 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 97 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 98 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 99 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 117 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 118 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 119 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 120 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 121 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 122 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 123 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 124 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 125 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 126 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 128 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 130 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 131 | 3300053110 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere | Metagenome | Endosphere |
| 132 | 3300053120 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere | Metagenome | Endosphere |
| 133 | 3300053133 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere | Metagenome | Endosphere |
| 134 | 3300053141 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere | Metagenome | Endosphere |
| 135 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 136 | 3300053157 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere | Metagenome | Endosphere |
| 137 | 3300053161 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere | Metagenome | Endosphere |
| 138 | 3300053162 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere | Metagenome | Endosphere |
| 139 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 140 | 3300053734 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.27 |
| Metatranscriptomes | 0 |
| Isolates | 4.73 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 17.16 |
| Nodule | 0.59 |
| Rhizoplane | 3.55 |
| Rhizosphere | 66.86 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 11.83 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25154J39366_1000336 | 3300002738 | Bacteria | 27003 |
| 2 | rootH1_10084329 | 3300003316 | Bacteria | 4292 |
| 3 | rootH2_10026876 | 3300003320 | Bacteria | 5312 |
| 4 | rootL2_10059154 | 3300003322 | Bacteria | 15361 |
| 5 | rootL2_10068819 | 3300003322 | Bacteria | 5114 |
| 6 | Ga0055525_1000238 | 3300003759 | Bacteria | 57257 |
| 7 | Ga0055529_1000119 | 3300003763 | Bacteria | 115765 |
| 8 | Ga0070666_10035006 | 3300005335 | Bacteria | 3329 |
| 9 | Ga0068868_100000108 | 3300005338 | Bacteria | 51477 |
| 10 | Ga0070675_100015111 | 3300005354 | Bacteria | 6098 |
| 11 | Ga0070671_100000036 | 3300005355 | Bacteria | 95440 |
| 12 | Ga0070671_100002802 | 3300005355 | Bacteria | 13547 |
| 13 | Ga0070673_100000405 | 3300005364 | Bacteria | 22787 |
| 14 | Ga0070688_100014607 | 3300005365 | Bacteria | 4453 |
| 15 | Ga0070667_100000440 | 3300005367 | Bacteria | 43394 |
| 16 | Ga0070663_100000031 | 3300005455 | Bacteria | 74126 |
| 17 | Ga0068867_100012335 | 3300005459 | Bacteria | 6046 |
| 18 | Ga0070685_10000338 | 3300005466 | Bacteria | 28781 |
| 19 | Ga0070697_100003158 | 3300005536 | Bacteria | 12656 |
| 20 | Ga0070702_100004949 | 3300005615 | Bacteria | 6146 |
| 21 | Ga0068852_100000116 | 3300005616 | Bacteria | 54311 |
| 22 | Ga0068858_100012012 | 3300005842 | Bacteria | 8164 |
| 23 | Ga0075365_10003291 | 3300006038 | Bacteria | 8287 |
| 24 | Ga0075368_10001731 | 3300006042 | Bacteria | 7026 |
| 25 | Ga0075364_10011372 | 3300006051 | Bacteria | 5407 |
| 26 | Ga0075367_10007524 | 3300006178 | Bacteria | 5584 |
| 27 | Ga0075369_10003017 | 3300006186 | Bacteria | 6088 |
| 28 | Ga0075366_10002679 | 3300006195 | Bacteria | 9186 |
| 29 | Ga0075370_10005839 | 3300006353 | Bacteria | 6149 |
| 30 | Ga0105240_10001524 | 3300009093 | Bacteria | 39410 |
| 31 | Ga0105241_10036609 | 3300009174 | Bacteria | 3694 |
| 32 | Ga0105242_10009644 | 3300009176 | Bacteria | 7399 |
| 33 | Ga0105248_10000797 | 3300009177 | Bacteria | 35383 |
| 34 | Ga0105237_10001593 | 3300009545 | Bacteria | 29522 |
| 35 | Ga0105249_10000394 | 3300009553 | Bacteria | 42210 |
| 36 | Ga0157374_10002224 | 3300013296 | Bacteria | 16357 |
| 37 | Ga0157374_10004944 | 3300013296 | Bacteria | 11188 |
| 38 | Ga0157375_10007429 | 3300013308 | Bacteria | 9591 |
| 39 | Ga0182008_10000093 | 3300014497 | Bacteria | 67966 |
| 40 | Ga0182007_10006310 | 3300015262 | Bacteria | 5100 |
| 41 | Ga0213872_10000057 | 3300021361 | Bacteria | 100906 |
| 42 | Ga0213872_10000190 | 3300021361 | Bacteria | 54695 |
| 43 | Ga0213872_10003632 | 3300021361 | Bacteria | 8462 |
| 44 | Ga0209563_100115 | 3300025230 | Bacteria | 134934 |
| 45 | Ga0207425_1000178 | 3300025245 | Bacteria | 52247 |
| 46 | Ga0209646_1000049 | 3300025246 | Bacteria | 301924 |
| 47 | Ga0209677_101681 | 3300025253 | Bacteria | 9246 |
| 48 | Ga0209233_1001002 | 3300025261 | Bacteria | 12072 |
| 49 | Ga0209455_1000047 | 3300025272 | Bacteria | 379709 |
| 50 | Ga0209025_1002459 | 3300025294 | Bacteria | 19572 |
| 51 | Ga0209758_1000475 | 3300025297 | Bacteria | 66207 |
| 52 | Ga0207656_10001372 | 3300025321 | Bacteria | 8030 |
| 53 | Ga0207688_10005171 | 3300025901 | Bacteria | 7091 |
| 54 | Ga0207680_10010464 | 3300025903 | Bacteria | 4641 |
| 55 | Ga0207647_10000391 | 3300025904 | Bacteria | 35888 |
| 56 | Ga0207645_10003462 | 3300025907 | Bacteria | 11979 |
| 57 | Ga0207705_10011352 | 3300025909 | Bacteria | 6452 |
| 58 | Ga0207684_10018000 | 3300025910 | Bacteria | 6056 |
| 59 | Ga0207695_10000651 | 3300025913 | Bacteria | 68979 |
| 60 | Ga0207659_10002960 | 3300025926 | Bacteria | 10114 |
| 61 | Ga0207644_10000136 | 3300025931 | Bacteria | 52507 |
| 62 | Ga0207644_10000155 | 3300025931 | Bacteria | 49535 |
| 63 | Ga0207706_10003249 | 3300025933 | Bacteria | 15578 |
| 64 | Ga0207711_10002510 | 3300025941 | Bacteria | 16357 |
| 65 | Ga0207667_10054088 | 3300025949 | Bacteria | 4223 |
| 66 | Ga0207651_10000469 | 3300025960 | Bacteria | 17016 |
| 67 | Ga0207712_10000207 | 3300025961 | Bacteria | 59439 |
| 68 | Ga0207712_10000345 | 3300025961 | Bacteria | 41964 |
| 69 | Ga0207658_10000020 | 3300025986 | Bacteria | 202984 |
| 70 | Ga0207658_10009985 | 3300025986 | Bacteria | 6452 |
| 71 | Ga0207639_10000114 | 3300026041 | Bacteria | 62176 |
| 72 | Ga0207678_10000010 | 3300026067 | Bacteria | 149258 |
| 73 | Ga0207708_10004604 | 3300026075 | Bacteria | 10147 |
| 74 | Ga0207648_10005316 | 3300026089 | Bacteria | 12989 |
| 75 | Ga0207675_100022292 | 3300026118 | Bacteria | 5897 |
| 76 | Ga0207683_10000065 | 3300026121 | Bacteria | 79668 |
| 77 | Ga0207683_10007129 | 3300026121 | Bacteria | 9582 |
| 78 | Ga0207698_10000272 | 3300026142 | Bacteria | 31380 |
| 79 | Ga0268266_10000007 | 3300028379 | Bacteria | 1372921 |
| 80 | Ga0307511_10000669 | 3300030521 | Bacteria | 36501 |
| 81 | Ga0265332_10000004 | 3300031238 | Bacteria | 426592 |
| 82 | Ga0265332_10000014 | 3300031238 | Bacteria | 249035 |
| 83 | Ga0265328_10000005 | 3300031239 | Bacteria | 230229 |
| 84 | Ga0265328_10000142 | 3300031239 | Bacteria | 33859 |
| 85 | Ga0265328_10002869 | 3300031239 | Bacteria | 7692 |
| 86 | Ga0265331_10000044 | 3300031250 | Bacteria | 186644 |
| 87 | Ga0265331_10006984 | 3300031250 | Bacteria | 6593 |
| 88 | Ga0265327_10000044 | 3300031251 | Bacteria | 284808 |
| 89 | Ga0265327_10000102 | 3300031251 | Bacteria | 186668 |
| 90 | Ga0265327_10000217 | 3300031251 | Bacteria | 117085 |
| 91 | Ga0265327_10002926 | 3300031251 | Bacteria | 17089 |
| 92 | Ga0265316_10000181 | 3300031344 | Bacteria | 71764 |
| 93 | Ga0265314_10001688 | 3300031711 | Bacteria | 24028 |
| 94 | Ga0395899_0001060 | 3300037312 | Bacteria | 24820 |
| 95 | Ga0395900_0010877 | 3300037418 | Bacteria | 9306 |
| 96 | Ga0395905_0001684 | 3300037471 | Bacteria | 26069 |
| 97 | Ga0436361_0374321 | 3300039447 | Bacteria | 74648 |
| 98 | Ga0436361_0420524 | 3300039447 | Bacteria | 55068 |
| 99 | Ga0436361_0488601 | 3300039447 | Bacteria | 34918 |
| 100 | Ga0436361_0681104 | 3300039447 | Bacteria | 24321 |
| 101 | Ga0466969_0004232 | 3300044656 | Bacteria | 7626 |
| 102 | Ga0453683_0027103 | 3300044673 | Bacteria | 3638 |
| 103 | Ga0466966_0000777 | 3300044684 | Bacteria | 20285 |
| 104 | Ga0466964_0000162 | 3300044706 | Bacteria | 18452 |
| 105 | Ga0466964_0001816 | 3300044706 | Bacteria | 7428 |
| 106 | Ga0453684_0000237 | 3300044712 | Bacteria | 236999 |
| 107 | Ga0453684_0003495 | 3300044712 | Bacteria | 35282 |
| 108 | Ga0453684_0003580 | 3300044712 | Bacteria | 34665 |
| 109 | Ga0466968_0001563 | 3300044735 | Bacteria | 8250 |
| 110 | Ga0466968_0001821 | 3300044735 | Bacteria | 7696 |
| 111 | Ga0466970_0003154 | 3300044765 | Bacteria | 8009 |
| 112 | Ga0466959_0003380 | 3300045049 | Bacteria | 10425 |
| 113 | Ga0466959_0009677 | 3300045049 | Bacteria | 6861 |
| 114 | Ga0451576_0042953 | 3300045051 | Bacteria | 4772 |
| 115 | Ga0495592_0001639 | 3300046454 | Bacteria | 15692 |
| 116 | Ga0495607_0002502 | 3300046501 | Bacteria | 14890 |
| 117 | Ga0495606_0000015 | 3300046507 | Bacteria | 288808 |
| 118 | Ga0495628_0007102 | 3300046516 | Bacteria | 9700 |
| 119 | Ga0495628_0027931 | 3300046516 | Bacteria | 4587 |
| 120 | Ga0495642_0010334 | 3300046528 | Bacteria | 3574 |
| 121 | Ga0495652_0021269 | 3300046529 | Bacteria | 5768 |
| 122 | Ga0495609_0000878 | 3300046538 | Bacteria | 22029 |
| 123 | Ga0495661_0013247 | 3300046665 | Bacteria | 5546 |
| 124 | Ga0495588_0002622 | 3300046674 | Bacteria | 7698 |
| 125 | Ga0495658_0019701 | 3300046683 | Bacteria | 3526 |
| 126 | Ga0495676_0000748 | 3300047321 | Bacteria | 27031 |
| 127 | Ga0495687_005228 | 3300047443 | Bacteria | 8367 |
| 128 | Ga0495681_0017120 | 3300047470 | Bacteria | 4037 |
| 129 | Ga0495686_0000325 | 3300047472 | Bacteria | 78833 |
| 130 | Ga0495593_0000325 | 3300047673 | Bacteria | 26425 |
| 131 | Ga0495614_0003731 | 3300048089 | Bacteria | 6843 |
| 132 | Ga0495626_0000003 | 3300048091 | Bacteria | 427774 |
| 133 | Ga0495626_0001588 | 3300048091 | Bacteria | 17741 |
| 134 | Ga0496100_0005124 | 3300048903 | Bacteria | 7025 |
| 135 | Ga0496108_0002512 | 3300048911 | Bacteria | 14667 |
| 136 | Ga0496109_0005878 | 3300048912 | Bacteria | 10294 |
| 137 | Ga0496109_0029735 | 3300048912 | Bacteria | 4895 |
| 138 | Ga0496110_0000397 | 3300048913 | Bacteria | 29425 |
| 139 | Ga0496110_0019937 | 3300048913 | Bacteria | 5652 |
| 140 | Ga0496117_0007944 | 3300048920 | Bacteria | 10194 |
| 141 | Ga0496118_0000065 | 3300048921 | Bacteria | 211750 |
| 142 | Ga0496122_0000037 | 3300048925 | Bacteria | 304495 |
| 143 | Ga0496123_0000083 | 3300048926 | Bacteria | 188730 |
| 144 | Ga0496124_0000125 | 3300048927 | Bacteria | 159942 |
| 145 | Ga0496125_0004435 | 3300048928 | Bacteria | 16188 |
| 146 | Ga0496125_0005760 | 3300048928 | Bacteria | 13622 |
| 147 | Ga0495678_000004 | 3300049459 | Bacteria | 532920 |
| 148 | nmdc:mga0sz30_10305_c1 | 3300050516 | Bacteria | 3581 |
| 149 | Ga0495601_0001263 | 3300053077 | Bacteria | 13855 |
| 150 | Ga0500643_003777 | 3300053087 | Bacteria | 7091 |
| 151 | Ga0500646_0000169 | 3300053090 | Bacteria | 19577 |
| 152 | Ga0500571_000159 | 3300053110 | Bacteria | 23600 |
| 153 | Ga0500597_000254 | 3300053120 | Bacteria | 10914 |
| 154 | Ga0500655_000112 | 3300053133 | Bacteria | 21113 |
| 155 | Ga0500574_000041 | 3300053141 | Bacteria | 15959 |
| 156 | Ga0500622_0000057 | 3300053156 | Bacteria | 141819 |
| 157 | Ga0500624_000083 | 3300053157 | Bacteria | 49123 |
| 158 | Ga0500634_0000105 | 3300053161 | Bacteria | 32265 |
| 159 | Ga0500638_000171 | 3300053162 | Bacteria | 12974 |
| 160 | Ga0500636_0007191 | 3300053177 | Bacteria | 6432 |
| 161 | Ga0500565_000061 | 3300053734 | Bacteria | 5099 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300044706 | Ga0466964_0000162 | Ga0466964_0000162_7732_10848 | 964 |
| 2 | 3300044735 | Ga0466968_0001821 | Ga0466968_0001821_4459_7563 | 964 |
| 3 | 3300031251 | Ga0265327_10002926 | Ga0265327_1000292611 | 966 |
| 4 | 3300005355 | Ga0070671_100000036 | Ga0070671_10000003634 | 967 |
| 5 | 3300025931 | Ga0207644_10000155 | Ga0207644_1000015538 | 967 |
| 6 | 3300021361 | Ga0213872_10003632 | Ga0213872_100036324 | 971 |
| 7 | 3300049459 | Ga0495678_000004 | Ga0495678_000004_273724_276837 | 976 |
| 8 | 3300006038 | Ga0075365_10003291 | Ga0075365_100032919 | 978 |
| 9 | 3300006042 | Ga0075368_10001731 | Ga0075368_100017318 | 978 |
| 10 | 3300006051 | Ga0075364_10011372 | Ga0075364_100113722 | 978 |
| 11 | 3300006178 | Ga0075367_10007524 | Ga0075367_100075244 | 978 |
| 12 | 3300006186 | Ga0075369_10003017 | Ga0075369_100030173 | 978 |
| 13 | 3300006195 | Ga0075366_10002679 | Ga0075366_100026799 | 978 |
| 14 | 3300006353 | Ga0075370_10005839 | Ga0075370_100058393 | 978 |
| 15 | 3300050516 | nmdc:mga0sz30_10305_c1 | nmdc:mga0sz30_10305_c1_14_3133 | 978 |
| 16 | 3300025910 | Ga0207684_10018000 | Ga0207684_100180004 | 982 |
| 17 | 3300025245 | Ga0207425_1000178 | Ga0207425_100017819 | 983 |
| 18 | 3300025294 | Ga0209025_1002459 | Ga0209025_10024596 | 983 |
| 19 | 3300025297 | Ga0209758_1000475 | Ga0209758_10004755 | 983 |
| 20 | 3300031251 | Ga0265327_10000044 | Ga0265327_10000044248 | 983 |
| 21 | 3300039447 | Ga0436361_0488601 | Ga0436361_0488601_31795_34908 | 983 |
| 22 | 3300030521 | Ga0307511_10000669 | Ga0307511_1000066910 | 984 |
| 23 | 3300053090 | Ga0500646_0000169 | Ga0500646_0000169_11413_14532 | 984 |
| 24 | 3300031238 | Ga0265332_10000004 | Ga0265332_10000004248 | 986 |
| 25 | 3300046528 | Ga0495642_0010334 | Ga0495642_0010334_309_3395 | 986 |
| 26 | 3300048927 | Ga0496124_0000125 | Ga0496124_0000125_57606_60713 | 987 |
| 27 | 3300048928 | Ga0496125_0004435 | Ga0496125_0004435_9571_12678 | 987 |
| 28 | 3300044712 | Ga0453684_0000237 | Ga0453684_0000237_185297_188407 | 989 |
| 29 | 3300046501 | Ga0495607_0002502 | Ga0495607_0002502_2115_5186 | 990 |
| 30 | 3300046538 | Ga0495609_0000878 | Ga0495609_0000878_4090_7161 | 990 |
| 31 | 3300046665 | Ga0495661_0013247 | Ga0495661_0013247_1872_4943 | 990 |
| 32 | 3300047470 | Ga0495681_0017120 | Ga0495681_0017120_826_3897 | 990 |
| 33 | 3300005365 | Ga0070688_100014607 | Ga0070688_1000146071 | 992 |
| 34 | 3300005615 | Ga0070702_100004949 | Ga0070702_1000049492 | 992 |
| 35 | 3300005842 | Ga0068858_100012012 | Ga0068858_1000120126 | 992 |
| 36 | 3300025901 | Ga0207688_10005171 | Ga0207688_100051714 | 992 |
| 37 | 3300025907 | Ga0207645_10003462 | Ga0207645_100034629 | 992 |
| 38 | 3300025933 | Ga0207706_10003249 | Ga0207706_100032497 | 992 |
| 39 | 3300026075 | Ga0207708_10004604 | Ga0207708_100046046 | 992 |
| 40 | 3300026089 | Ga0207648_10005316 | Ga0207648_100053164 | 992 |
| 41 | 3300026118 | Ga0207675_100022292 | Ga0207675_1000222922 | 992 |
| 42 | 3300026121 | Ga0207683_10007129 | Ga0207683_100071293 | 992 |
| 43 | 3300031239 | Ga0265328_10000142 | Ga0265328_1000014223 | 993 |
| 44 | 3300031250 | Ga0265331_10000044 | Ga0265331_10000044125 | 993 |
| 45 | 3300031251 | Ga0265327_10000102 | Ga0265327_1000010270 | 993 |
| 46 | 3300046674 | Ga0495588_0002622 | Ga0495588_0002622_1864_4980 | 994 |
| 47 | 3300048928 | Ga0496125_0005760 | Ga0496125_0005760_1014_4139 | 994 |
| 48 | 3300009174 | Ga0105241_10036609 | Ga0105241_100366092 | 995 |
| 49 | 3300026041 | Ga0207639_10000114 | Ga0207639_1000011427 | 995 |
| 50 | 3300044712 | Ga0453684_0003495 | Ga0453684_0003495_5794_8901 | 995 |
| 51 | 3300003763 | Ga0055529_1000119 | Ga0055529_100011969 | 996 |
| 52 | 3300025272 | Ga0209455_1000047 | Ga0209455_1000047158 | 996 |
| 53 | 3300045049 | Ga0466959_0009677 | Ga0466959_0009677_2616_5720 | 996 |
| 54 | 3300009176 | Ga0105242_10009644 | Ga0105242_100096444 | 997 |
| 55 | 3300048091 | Ga0495626_0000003 | Ga0495626_0000003_181683_184802 | 997 |
| 56 | 3300003759 | Ga0055525_1000238 | Ga0055525_100023818 | 998 |
| 57 | 3300025230 | Ga0209563_100115 | Ga0209563_10011518 | 998 |
| 58 | 3300025253 | Ga0209677_101681 | Ga0209677_1016813 | 998 |
| 59 | 3300045049 | Ga0466959_0003380 | Ga0466959_0003380_6979_10110 | 998 |
| 60 | 3300048091 | Ga0495626_0001588 | Ga0495626_0001588_7205_10342 | 998 |
| 61 | iso_pu_bacteria | 2857553236 | 2857554564 | 999 |
| 62 | 3300031250 | Ga0265331_10006984 | Ga0265331_100069844 | 1000 |
| 63 | 3300037471 | Ga0395905_0001684 | Ga0395905_0001684_8943_12023 | 1000 |
| 64 | 3300044735 | Ga0466968_0001563 | Ga0466968_0001563_594_3680 | 1000 |
| 65 | 3300047472 | Ga0495686_0000325 | Ga0495686_0000325_61137_64259 | 1000 |
| 66 | 3300048920 | Ga0496117_0007944 | Ga0496117_0007944_2394_5534 | 1000 |
| 67 | 3300048921 | Ga0496118_0000065 | Ga0496118_0000065_50568_53708 | 1000 |
| 68 | 3300005367 | Ga0070667_100000440 | Ga0070667_10000044019 | 1001 |
| 69 | 3300005455 | Ga0070663_100000031 | Ga0070663_1000000313 | 1001 |
| 70 | 3300009177 | Ga0105248_10000797 | Ga0105248_100007978 | 1001 |
| 71 | 3300009545 | Ga0105237_10001593 | Ga0105237_1000159322 | 1001 |
| 72 | 3300009553 | Ga0105249_10000394 | Ga0105249_1000039427 | 1001 |
| 73 | 3300025941 | Ga0207711_10002510 | Ga0207711_100025103 | 1001 |
| 74 | 3300025961 | Ga0207712_10000345 | Ga0207712_1000034527 | 1001 |
| 75 | 3300025986 | Ga0207658_10000020 | Ga0207658_1000002059 | 1001 |
| 76 | 3300026067 | Ga0207678_10000010 | Ga0207678_1000001074 | 1001 |
| 77 | 3300048925 | Ga0496122_0000037 | Ga0496122_0000037_110891_113962 | 1001 |
| 78 | 3300048926 | Ga0496123_0000083 | Ga0496123_0000083_154026_157097 | 1001 |
| 79 | 3300005466 | Ga0070685_10000338 | Ga0070685_100003389 | 1002 |
| 80 | 3300009093 | Ga0105240_10001524 | Ga0105240_1000152414 | 1002 |
| 81 | 3300025261 | Ga0209233_1001002 | Ga0209233_10010021 | 1002 |
| 82 | 3300025321 | Ga0207656_10001372 | Ga0207656_100013724 | 1002 |
| 83 | 3300025903 | Ga0207680_10010464 | Ga0207680_100104643 | 1002 |
| 84 | 3300025904 | Ga0207647_10000391 | Ga0207647_1000039115 | 1002 |
| 85 | 3300025913 | Ga0207695_10000651 | Ga0207695_1000065113 | 1002 |
| 86 | 3300025949 | Ga0207667_10054088 | Ga0207667_100540882 | 1002 |
| 87 | 3300025961 | Ga0207712_10000207 | Ga0207712_1000020725 | 1002 |
| 88 | 3300025986 | Ga0207658_10009985 | Ga0207658_100099853 | 1002 |
| 89 | 3300028379 | Ga0268266_10000007 | Ga0268266_1000000732 | 1002 |
| 90 | 3300031239 | Ga0265328_10002869 | Ga0265328_100028695 | 1002 |
| 91 | 3300031344 | Ga0265316_10000181 | Ga0265316_1000018163 | 1002 |
| 92 | 3300048903 | Ga0496100_0005124 | Ga0496100_0005124_853_3969 | 1002 |
| 93 | 3300053087 | Ga0500643_003777 | Ga0500643_003777_1376_4480 | 1002 |
| 94 | 3300053120 | Ga0500597_000254 | Ga0500597_000254_2077_5181 | 1002 |
| 95 | iso_pu_bacteria | 2513237165 | 2514044892 | 1002 |
| 96 | iso_pu_bacteria | 2547132512 | 2548849305 | 1002 |
| 97 | iso_pu_bacteria | 2738541307 | 2738881583 | 1002 |
| 98 | iso_pu_bacteria | 2818991446 | 2819596069 | 1002 |
| 99 | iso_pu_bacteria | 2899924645 | 2899925420 | 1002 |
| 100 | iso_pu_bacteria | 2928051484 | 2928053609 | 1002 |
| 101 | iso_pu_bacteria | 2928064002 | 2928067156 | 1002 |
| 102 | 3300003322 | rootL2_10059154 | rootL2_100591545 | 1003 |
| 103 | 3300003322 | rootL2_10068819 | rootL2_100688192 | 1003 |
| 104 | 3300015262 | Ga0182007_10006310 | Ga0182007_100063103 | 1003 |
| 105 | 3300021361 | Ga0213872_10000190 | Ga0213872_1000019024 | 1004 |
| 106 | 3300039447 | Ga0436361_0420524 | Ga0436361_0420524_26045_29200 | 1004 |
| 107 | 3300044712 | Ga0453684_0003580 | Ga0453684_0003580_16161_19262 | 1005 |
| 108 | 3300046454 | Ga0495592_0001639 | Ga0495592_0001639_11278_14364 | 1005 |
| 109 | 3300046516 | Ga0495628_0007102 | Ga0495628_0007102_4135_7221 | 1005 |
| 110 | 3300047443 | Ga0495687_005228 | Ga0495687_005228_5005_8088 | 1005 |
| 111 | 3300048913 | Ga0496110_0000397 | Ga0496110_0000397_22957_26046 | 1005 |
| 112 | 3300053077 | Ga0495601_0001263 | Ga0495601_0001263_4378_7464 | 1005 |
| 113 | 3300003316 | rootH1_10084329 | rootH1_100843292 | 1006 |
| 114 | 3300003320 | rootH2_10026876 | rootH2_100268763 | 1006 |
| 115 | 3300005335 | Ga0070666_10035006 | Ga0070666_100350062 | 1006 |
| 116 | 3300005338 | Ga0068868_100000108 | Ga0068868_10000010841 | 1006 |
| 117 | 3300005354 | Ga0070675_100015111 | Ga0070675_1000151112 | 1006 |
| 118 | 3300005355 | Ga0070671_100002802 | Ga0070671_1000028026 | 1006 |
| 119 | 3300005364 | Ga0070673_100000405 | Ga0070673_10000040515 | 1006 |
| 120 | 3300005459 | Ga0068867_100012335 | Ga0068867_1000123353 | 1006 |
| 121 | 3300005616 | Ga0068852_100000116 | Ga0068852_1000001167 | 1006 |
| 122 | 3300013296 | Ga0157374_10002224 | Ga0157374_100022246 | 1006 |
| 123 | 3300013296 | Ga0157374_10004944 | Ga0157374_100049445 | 1006 |
| 124 | 3300013308 | Ga0157375_10007429 | Ga0157375_100074293 | 1006 |
| 125 | 3300014497 | Ga0182008_10000093 | Ga0182008_1000009316 | 1006 |
| 126 | 3300025909 | Ga0207705_10011352 | Ga0207705_100113523 | 1006 |
| 127 | 3300025926 | Ga0207659_10002960 | Ga0207659_100029603 | 1006 |
| 128 | 3300025931 | Ga0207644_10000136 | Ga0207644_1000013649 | 1006 |
| 129 | 3300025960 | Ga0207651_10000469 | Ga0207651_100004692 | 1006 |
| 130 | 3300026121 | Ga0207683_10000065 | Ga0207683_1000006522 | 1006 |
| 131 | 3300026142 | Ga0207698_10000272 | Ga0207698_1000027217 | 1006 |
| 132 | 3300031238 | Ga0265332_10000014 | Ga0265332_10000014186 | 1006 |
| 133 | 3300031239 | Ga0265328_10000005 | Ga0265328_1000000564 | 1006 |
| 134 | 3300031251 | Ga0265327_10000217 | Ga0265327_1000021715 | 1006 |
| 135 | 3300037312 | Ga0395899_0001060 | Ga0395899_0001060_5861_8947 | 1006 |
| 136 | 3300037418 | Ga0395900_0010877 | Ga0395900_0010877_5858_8944 | 1006 |
| 137 | 3300044656 | Ga0466969_0004232 | Ga0466969_0004232_1558_4704 | 1006 |
| 138 | 3300044673 | Ga0453683_0027103 | Ga0453683_0027103_225_3335 | 1006 |
| 139 | 3300044684 | Ga0466966_0000777 | Ga0466966_0000777_8895_12041 | 1006 |
| 140 | 3300044706 | Ga0466964_0001816 | Ga0466964_0001816_1111_4197 | 1006 |
| 141 | 3300044765 | Ga0466970_0003154 | Ga0466970_0003154_2235_5381 | 1006 |
| 142 | 3300045051 | Ga0451576_0042953 | Ga0451576_0042953_1324_4434 | 1006 |
| 143 | 3300046683 | Ga0495658_0019701 | Ga0495658_0019701_283_3435 | 1006 |
| 144 | 3300047321 | Ga0495676_0000748 | Ga0495676_0000748_17614_20766 | 1006 |
| 145 | 3300047673 | Ga0495593_0000325 | Ga0495593_0000325_6394_9546 | 1006 |
| 146 | 3300048089 | Ga0495614_0003731 | Ga0495614_0003731_1973_5125 | 1006 |
| 147 | 3300048911 | Ga0496108_0002512 | Ga0496108_0002512_10197_13307 | 1006 |
| 148 | 3300048912 | Ga0496109_0005878 | Ga0496109_0005878_102_3212 | 1006 |
| 149 | 3300048912 | Ga0496109_0029735 | Ga0496109_0029735_1354_4440 | 1006 |
| 150 | 3300048913 | Ga0496110_0019937 | Ga0496110_0019937_65_3151 | 1006 |
| 151 | 3300053110 | Ga0500571_000159 | Ga0500571_000159_14034_17186 | 1006 |
| 152 | 3300053133 | Ga0500655_000112 | Ga0500655_000112_7381_10533 | 1006 |
| 153 | 3300053141 | Ga0500574_000041 | Ga0500574_000041_10844_13996 | 1006 |
| 154 | 3300053157 | Ga0500624_000083 | Ga0500624_000083_38807_41914 | 1006 |
| 155 | 3300053161 | Ga0500634_0000105 | Ga0500634_0000105_17928_21056 | 1006 |
| 156 | 3300053162 | Ga0500638_000171 | Ga0500638_000171_7727_10879 | 1006 |
| 157 | 3300053177 | Ga0500636_0007191 | Ga0500636_0007191_1982_5134 | 1006 |
| 158 | 3300053734 | Ga0500565_000061 | Ga0500565_000061_1742_4894 | 1006 |
| 159 | 3300002738 | JGI25154J39366_1000336 | JGI25154J39366_100033614 | 1007 |
| 160 | 3300005536 | Ga0070697_100003158 | Ga0070697_1000031583 | 1007 |
| 161 | 3300021361 | Ga0213872_10000057 | Ga0213872_1000005753 | 1007 |
| 162 | 3300025246 | Ga0209646_1000049 | Ga0209646_1000049129 | 1007 |
| 163 | 3300031711 | Ga0265314_10001688 | Ga0265314_1000168815 | 1007 |
| 164 | 3300039447 | Ga0436361_0374321 | Ga0436361_0374321_35222_38311 | 1007 |
| 165 | 3300039447 | Ga0436361_0681104 | Ga0436361_0681104_4424_7519 | 1007 |
| 166 | 3300046507 | Ga0495606_0000015 | Ga0495606_0000015_6807_9920 | 1007 |
| 167 | 3300046516 | Ga0495628_0027931 | Ga0495628_0027931_58_3162 | 1007 |
| 168 | 3300046529 | Ga0495652_0021269 | Ga0495652_0021269_504_3608 | 1007 |
| 169 | 3300053156 | Ga0500622_0000057 | Ga0500622_0000057_103055_106162 | 1007 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4dnt-assembly1.cif.gz_A | crystal structure of the cusba heavy-metal efflux complex from escherichia coli, mutant | 0.9245 | 1 | 999 |
| 3t51-assembly1.cif.gz_A | crystal structures of the pre-extrusion and extrusion states of the cusba adaptor-transporter complex | 0.9238 | 6 | 999 |
| 4dop-assembly1.cif.gz_A | crystal structure of the cusba heavy-metal efflux complex from escherichia coli, r mutant | 0.9229 | 1 | 999 |
| 3k07-assembly1.cif.gz_A | crystal structure of cusa | 0.9206 | 6 | 999 |
| 4k0j-assembly2.cif.gz_D | x-ray crystal structure of a heavy metal efflux pump, crystal form i | 0.9205 | 5 | 1003 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P38054_46_113_3.30.70.1430 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain | 0.9777 | 48 | 112 | 3.30.70.1430 |
| af_P24181_868_1032_1.20.1640.10 | Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain | 0.9484 | 865 | 1000 | 1.20.1640.10 |
| af_Q2FVZ5_39_104_3.30.70.1430 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain | 0.9373 | 39 | 103 | 3.30.70.1430 |
| af_P38054_187_267_3.30.2090.10 | Alpha Beta;2-Layer Sandwich;Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains;Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains | 0.935 | 185 | 262 | 3.30.2090.10 |
| af_Q2FVZ5_891_1052_1.20.1640.10 | Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain | 0.9294 | 875 | 999 | 1.20.1640.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3D4V7P5-F1-model_v4 | CusA/CzcA family heavy metal efflux RND transporter | 0.9575 | 1 | 999 |
GO:0005886
GO:0008324 GO:0042910 |
| AF-A0A7Y4SSA4-F1-model_v4 | Efflux RND transporter permease subunit | 0.954 | 30 | 870 |
GO:0005886
GO:0008324 GO:0042910 |
| AF-A0A317I8V7-F1-model_v4 | CusA/CzcA family heavy metal efflux RND transporter | 0.9518 | 1 | 1000 |
GO:0005886
GO:0008324 GO:0042910 |
| AF-A0A022J8W2-F1-model_v4 | Cobalt-zinc-cadmium resistance protein CzcA | 0.9516 | 1 | 1007 |
GO:0005886
GO:0008324 GO:0042910 |
| AF-A0A831LDQ4-F1-model_v4 | Efflux RND transporter permease subunit | 0.9512 | 1 | 881 |
GO:0005886
GO:0008324 GO:0042910 |
Predicted Structure (AlphaFold2)
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