F255240

General Info

Members Datasets Scaffolds Average Seq Length
169 83 338 447

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0079271|Ga0451577_0079271_795_2204
Length 469
Sequence MPAEDQPDLFAANDTAASATPGAEWPATPRKQPLAARMRPRSLAEIAGQRHILEPGSLLPRLVKSNQFGSLIFYGPPGCGKTSLAEAIARETASRFVRLNAVLSNVAELREVLAIARHRQETTILFIDELHRFNKSQQDLLLPDVEQGNIRLIGATTHNPGFYVNPPLLSRSHLFRLDPVAIDDVTAVLRRALDDSERGLGLTGCTTSDEVLRDLAALCDGDLRRALNALETLILGLPIKGELTSAQLEVFAKERRIRYDADEDEHYDTISVFIKSIRGSDPDAALYWLAKMLAGGEDPRFIARRLVISASEDVGLADPLALPLAVAAHQACEFVGLPEAEYALAHATVHLASAPKSNSVTLALHAAKAALAQGPVQQVPMPMRDKGGQASKRMGHGEGYLYSHDFPENVSGQDYLENPLRFYEPKPVGFEAKTAERIAKWRELKRQLQIRAASKPAGKTPGPAPVKPA

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
21 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
22 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
30 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
31 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
32 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
33 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
34 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
35 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
36 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
37 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
38 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
39 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
40 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
41 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
42 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
43 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
44 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
45 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
46 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
47 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
48 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
49 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
52 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
53 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
54 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
55 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
56 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
57 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
58 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
59 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
60 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
61 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
62 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
64 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
75 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
76 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
78 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
79 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
80 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
81 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
82 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
83 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.41
Metatranscriptomes 0
Isolates 0.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.78
Nodule 0
Rhizoplane 0.59
Rhizosphere 94.08
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0079271 3300042876 Bacteria 2928
2 JGI25151J46595_10000166 3300003187 Bacteria 85475
3 rootH2_10002880 3300003320 Bacteria 8710
4 rootL2_10001275 3300003322 Bacteria 5846
5 rootL2_10029647 3300003322 Bacteria 4463
6 Ga0070683_100011684 3300005329 Bacteria 7603
7 Ga0070683_100276915 3300005329 Bacteria 1596
8 Ga0068869_100000005 3300005334 Bacteria 103764
9 Ga0068868_100005019 3300005338 Bacteria 9297
10 Ga0068868_100016497 3300005338 Bacteria 5486
11 Ga0070714_100000396 3300005435 Bacteria 32260
12 Ga0070713_100097785 3300005436 Bacteria 2537
13 Ga0068867_100003814 3300005459 Bacteria 10603
14 Ga0070699_100000028 3300005518 Bacteria 156839
15 Ga0070679_100019377 3300005530 Bacteria 6613
16 Ga0070684_100032384 3300005535 Bacteria 4455
17 Ga0068853_100201759 3300005539 Bacteria 1810
18 Ga0068856_100010321 3300005614 Bacteria 9075
19 Ga0070717_10000003 3300006028 Bacteria 370103
20 Ga0070717_10001303 3300006028 Bacteria 17056
21 Ga0097621_100001057 3300006237 Bacteria 19265
22 Ga0075430_100021385 3300006846 Bacteria 5500
23 Ga0075431_100042493 3300006847 Bacteria 4689
24 Ga0068865_100001307 3300006881 Bacteria 14491
25 Ga0163163_10057085 3300014325 Bacteria 3860
26 Ga0207652_10013459 3300025921 Bacteria 6620
27 Ga0207664_10005231 3300025929 Bacteria 8851
28 Ga0207704_10001343 3300025938 Bacteria 10973
29 Ga0207689_10000323 3300025942 Bacteria 44332
30 Ga0207661_10007712 3300025944 Bacteria 7661
31 Ga0207661_10193310 3300025944 Bacteria 1785
32 Ga0207677_10015982 3300026023 Bacteria 4432
33 Ga0207702_10000670 3300026078 Bacteria 37280
34 Ga0265337_1005340 3300028556 Bacteria 5119
35 Ga0265337_1014047 3300028556 Bacteria 2666
36 Ga0265337_1017413 3300028556 Bacteria 2304
37 Ga0265319_1000188 3300028563 Bacteria 46993
38 Ga0265319_1002335 3300028563 Bacteria 10457
39 Ga0265319_1002630 3300028563 Bacteria 9669
40 Ga0265319_1009328 3300028563 Bacteria 4190
41 Ga0265319_1012374 3300028563 Bacteria 3453
42 Ga0265319_1023926 3300028563 Bacteria 2207
43 Ga0265334_10002172 3300028573 Bacteria 9228
44 Ga0265334_10042050 3300028573 Bacteria 1783
45 Ga0265318_10000006 3300028577 Bacteria 285591
46 Ga0265318_10000377 3300028577 Bacteria 34827
47 Ga0265318_10001174 3300028577 Bacteria 16206
48 Ga0265318_10003273 3300028577 Bacteria 8233
49 Ga0265318_10013545 3300028577 Bacteria 3441
50 Ga0265318_10021307 3300028577 Bacteria 2603
51 Ga0265323_10000006 3300028653 Bacteria 141508
52 Ga0265323_10001249 3300028653 Bacteria 12792
53 Ga0265323_10005687 3300028653 Bacteria 5285
54 Ga0265323_10044836 3300028653 Bacteria 1591
55 Ga0265322_10001136 3300028654 Bacteria 9132
56 Ga0265322_10001325 3300028654 Bacteria 8278
57 Ga0265336_10002403 3300028666 Bacteria 7751
58 Ga0265338_10000201 3300028800 Bacteria 112868
59 Ga0265338_10000653 3300028800 Bacteria 59925
60 Ga0265338_10003596 3300028800 Bacteria 21636
61 Ga0265324_10000485 3300029957 Bacteria 27807
62 Ga0265324_10025593 3300029957 Bacteria 2091
63 Ga0265320_10000116 3300031240 Bacteria 69236
64 Ga0265320_10000359 3300031240 Bacteria 37134
65 Ga0265320_10000968 3300031240 Bacteria 21363
66 Ga0265320_10003749 3300031240 Bacteria 10114
67 Ga0265320_10004101 3300031240 Bacteria 9575
68 Ga0265320_10009442 3300031240 Bacteria 5881
69 Ga0265320_10009995 3300031240 Bacteria 5675
70 Ga0265320_10023641 3300031240 Bacteria 3266
71 Ga0265320_10029615 3300031240 Bacteria 2832
72 Ga0265331_10002468 3300031250 Bacteria 12504
73 Ga0265331_10010320 3300031250 Bacteria 5175
74 Ga0265327_10000342 3300031251 Bacteria 88184
75 Ga0265327_10001076 3300031251 Bacteria 38060
76 Ga0265327_10002440 3300031251 Bacteria 19613
77 Ga0265327_10012618 3300031251 Bacteria 5684
78 Ga0265327_10012858 3300031251 Bacteria 5606
79 Ga0265316_10000505 3300031344 Bacteria 43994
80 Ga0265316_10004837 3300031344 Bacteria 13276
81 Ga0265316_10011887 3300031344 Bacteria 7826
82 Ga0265316_10016876 3300031344 Bacteria 6320
83 Ga0265316_10030542 3300031344 Bacteria 4415
84 Ga0265316_10110343 3300031344 Bacteria 2083
85 Ga0307408_100000003 3300031548 Bacteria 618438
86 Ga0265313_10000377 3300031595 Bacteria 48049
87 Ga0265313_10000392 3300031595 Bacteria 47135
88 Ga0265313_10002297 3300031595 Bacteria 16746
89 Ga0265313_10002444 3300031595 Bacteria 16037
90 Ga0265313_10002464 3300031595 Bacteria 15947
91 Ga0265313_10003739 3300031595 Bacteria 12105
92 Ga0265313_10005558 3300031595 Bacteria 9239
93 Ga0265313_10010992 3300031595 Bacteria 5661
94 Ga0265313_10029514 3300031595 Bacteria 2836
95 Ga0307508_10002742 3300031616 Bacteria 18374
96 Ga0265314_10000286 3300031711 Bacteria 73484
97 Ga0265314_10002202 3300031711 Bacteria 20334
98 Ga0265314_10032435 3300031711 Bacteria 3843
99 Ga0265314_10041014 3300031711 Bacteria 3317
100 Ga0265314_10143299 3300031711 Bacteria 1474
101 Ga0265342_10003076 3300031712 Bacteria 13945
102 Ga0265342_10007060 3300031712 Bacteria 8279
103 Ga0265342_10011736 3300031712 Bacteria 5977
104 Ga0265342_10020701 3300031712 Bacteria 4213
105 Ga0265342_10029744 3300031712 Bacteria 3389
106 Ga0265342_10030412 3300031712 Bacteria 3346
107 Ga0307410_10000002 3300031852 Bacteria 145309
108 Ga0307407_10011973 3300031903 Bacteria 4153
109 Ga0307409_100000246 3300031995 Bacteria 21827
110 Ga0307416_100000012 3300032002 Bacteria 296814
111 Ga0316582_0010810 3300036647 Bacteria 5017
112 Ga0395905_0000064 3300037471 Bacteria 186494
113 Ga0436364_1498634 3300037853 Bacteria 1588
114 Ga0439445_0003554 3300042004 Bacteria 3494
115 Ga0451577_0000076 3300042876 Bacteria 225346
116 Ga0451577_0000272 3300042876 Bacteria 101103
117 Ga0453683_0004967 3300044673 Bacteria 9345
118 Ga0466966_0104817 3300044684 Bacteria 1746
119 Ga0466961_0136356 3300044693 Bacteria 1538
120 Ga0453684_0000001 3300044712 Bacteria 2623166
121 Ga0453684_0037399 3300044712 Bacteria 6663
122 Ga0453684_0288763 3300044712 Bacteria 1868
123 Ga0466968_0016223 3300044735 Bacteria 2964
124 Ga0451576_0000143 3300045051 Bacteria 180834
125 Ga0451576_0000532 3300045051 Bacteria 82063
126 Ga0451576_0001380 3300045051 Bacteria 41732
127 Ga0451576_0005646 3300045051 Bacteria 15618
128 Ga0451576_0027712 3300045051 Bacteria 6082
129 Ga0451576_0052804 3300045051 Bacteria 4259
130 Ga0496109_0149185 3300048912 Bacteria 2189
131 Ga0501031_0060960 3300049568 Bacteria 2458
132 Ga0501032_0000815 3300049569 Bacteria 25305
133 Ga0501033_0000680 3300049570 Bacteria 31437
134 Ga0501033_0003432 3300049570 Bacteria 13034
135 Ga0501034_0057450 3300049571 Bacteria 3912
136 Ga0501036_0050868 3300049572 Bacteria 3508
137 Ga0501036_0055284 3300049572 Bacteria 3362
138 Ga0501037_0000827 3300049573 Bacteria 23157
139 Ga0501037_0002780 3300049573 Bacteria 12671
140 Ga0501038_0000417 3300049574 Bacteria 36952
141 Ga0501039_0010715 3300049575 Bacteria 6985
142 Ga0501043_0025849 3300049579 Bacteria 4605
143 Ga0501046_0026681 3300049580 Bacteria 4718
144 Ga0501046_0029715 3300049580 Bacteria 4441
145 Ga0501046_0062753 3300049580 Bacteria 2902
146 Ga0501046_0065601 3300049580 Bacteria 2832
147 Ga0501046_0079628 3300049580 Bacteria 2532
148 Ga0501047_0003741 3300049581 Bacteria 14327
149 Ga0501047_0030298 3300049581 Bacteria 5217
150 Ga0501047_0133041 3300049581 Bacteria 2367
151 Ga0501047_0249135 3300049581 Bacteria 1625
152 Ga0501048_0001109 3300049582 Bacteria 20205
153 Ga0501080_0016208 3300049742 Bacteria 6881
154 Ga0501080_0030418 3300049742 Bacteria 5031
155 Ga0501083_0006581 3300049744 Bacteria 8246
156 Ga0501083_0031170 3300049744 Bacteria 3659
157 Ga0501035_0001549 3300049822 Bacteria 23426
158 Ga0501035_0004058 3300049822 Bacteria 13937
159 Ga0501035_0042851 3300049822 Bacteria 4080
160 Ga0501035_0070380 3300049822 Bacteria 3099
161 Ga0501044_0008729 3300049823 Bacteria 11094
162 Ga0501044_0046331 3300049823 Bacteria 4502
163 Ga0501044_0071608 3300049823 Bacteria 3524
164 nmdc:mga0qj67_17137_c1 3300050509 Bacteria 5505
165 nmdc:mga06r32_33808_c1 3300050510 Bacteria 4817
166 nmdc:mga0n895_84775_c1 3300050512 Bacteria 3162
167 Ga0500568_0015247 3300053139 Bacteria 3445
168 Ga0500622_0052152 3300053156 Bacteria 2104
169 2788435289 2786546940 Bacteria 6396474
170 Ga0451577_0079271
171 JGI25151J46595_10000166
172 rootH2_10002880
173 rootL2_10001275
174 rootL2_10029647
175 Ga0070683_100011684
176 Ga0070683_100276915
177 Ga0068869_100000005
178 Ga0068868_100005019
179 Ga0068868_100016497
180 Ga0070714_100000396
181 Ga0070713_100097785
182 Ga0068867_100003814
183 Ga0070699_100000028
184 Ga0070679_100019377
185 Ga0070684_100032384
186 Ga0068853_100201759
187 Ga0068856_100010321
188 Ga0070717_10000003
189 Ga0070717_10001303
190 Ga0097621_100001057
191 Ga0075430_100021385
192 Ga0075431_100042493
193 Ga0068865_100001307
194 Ga0163163_10057085
195 Ga0207652_10013459
196 Ga0207664_10005231
197 Ga0207704_10001343
198 Ga0207689_10000323
199 Ga0207661_10007712
200 Ga0207661_10193310
201 Ga0207677_10015982
202 Ga0207702_10000670
203 Ga0265337_1005340
204 Ga0265337_1014047
205 Ga0265337_1017413
206 Ga0265319_1000188
207 Ga0265319_1002335
208 Ga0265319_1002630
209 Ga0265319_1009328
210 Ga0265319_1012374
211 Ga0265319_1023926
212 Ga0265334_10002172
213 Ga0265334_10042050
214 Ga0265318_10000006
215 Ga0265318_10000377
216 Ga0265318_10001174
217 Ga0265318_10003273
218 Ga0265318_10013545
219 Ga0265318_10021307
220 Ga0265323_10000006
221 Ga0265323_10001249
222 Ga0265323_10005687
223 Ga0265323_10044836
224 Ga0265322_10001136
225 Ga0265322_10001325
226 Ga0265336_10002403
227 Ga0265338_10000201
228 Ga0265338_10000653
229 Ga0265338_10003596
230 Ga0265324_10000485
231 Ga0265324_10025593
232 Ga0265320_10000116
233 Ga0265320_10000359
234 Ga0265320_10000968
235 Ga0265320_10003749
236 Ga0265320_10004101
237 Ga0265320_10009442
238 Ga0265320_10009995
239 Ga0265320_10023641
240 Ga0265320_10029615
241 Ga0265331_10002468
242 Ga0265331_10010320
243 Ga0265327_10000342
244 Ga0265327_10001076
245 Ga0265327_10002440
246 Ga0265327_10012618
247 Ga0265327_10012858
248 Ga0265316_10000505
249 Ga0265316_10004837
250 Ga0265316_10011887
251 Ga0265316_10016876
252 Ga0265316_10030542
253 Ga0265316_10110343
254 Ga0307408_100000003
255 Ga0265313_10000377
256 Ga0265313_10000392
257 Ga0265313_10002297
258 Ga0265313_10002444
259 Ga0265313_10002464
260 Ga0265313_10003739
261 Ga0265313_10005558
262 Ga0265313_10010992
263 Ga0265313_10029514
264 Ga0307508_10002742
265 Ga0265314_10000286
266 Ga0265314_10002202
267 Ga0265314_10032435
268 Ga0265314_10041014
269 Ga0265314_10143299
270 Ga0265342_10003076
271 Ga0265342_10007060
272 Ga0265342_10011736
273 Ga0265342_10020701
274 Ga0265342_10029744
275 Ga0265342_10030412
276 Ga0307410_10000002
277 Ga0307407_10011973
278 Ga0307409_100000246
279 Ga0307416_100000012
280 Ga0316582_0010810
281 Ga0395905_0000064
282 Ga0436364_1498634
283 Ga0439445_0003554
284 Ga0451577_0000076
285 Ga0451577_0000272
286 Ga0453683_0004967
287 Ga0466966_0104817
288 Ga0466961_0136356
289 Ga0453684_0000001
290 Ga0453684_0037399
291 Ga0453684_0288763
292 Ga0466968_0016223
293 Ga0451576_0000143
294 Ga0451576_0000532
295 Ga0451576_0001380
296 Ga0451576_0005646
297 Ga0451576_0027712
298 Ga0451576_0052804
299 Ga0496109_0149185
300 Ga0501031_0060960
301 Ga0501032_0000815
302 Ga0501033_0000680
303 Ga0501033_0003432
304 Ga0501034_0057450
305 Ga0501036_0050868
306 Ga0501036_0055284
307 Ga0501037_0000827
308 Ga0501037_0002780
309 Ga0501038_0000417
310 Ga0501039_0010715
311 Ga0501043_0025849
312 Ga0501046_0026681
313 Ga0501046_0029715
314 Ga0501046_0062753
315 Ga0501046_0065601
316 Ga0501046_0079628
317 Ga0501047_0003741
318 Ga0501047_0030298
319 Ga0501047_0133041
320 Ga0501047_0249135
321 Ga0501048_0001109
322 Ga0501080_0016208
323 Ga0501080_0030418
324 Ga0501083_0006581
325 Ga0501083_0031170
326 Ga0501035_0001549
327 Ga0501035_0004058
328 Ga0501035_0042851
329 Ga0501035_0070380
330 Ga0501044_0008729
331 Ga0501044_0046331
332 Ga0501044_0071608
333 nmdc:mga0qj67_17137_c1
334 nmdc:mga06r32_33808_c1
335 nmdc:mga0n895_84775_c1
336 Ga0500568_0015247
337 Ga0500622_0052152
338 2788435289

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12002

MgsA_C

MgsA AAA+ ATPase C terminal

279

442

0.98

PF16193

AAA_assoc_2

AAA C-terminal domain

201

278

0.95

PF05496

RuvB_N

Holliday junction DNA helicase RuvB P-loop domain

38

163

0.86

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

71

177

0.85

PF05673

DUF815

Protein of unknown function (DUF815)

27

148

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
8g28-assembly1.cif.gz_A crystal structure of the c-terminal fragment of aaa atpase from streptococcus pneumoniae. 0.9487 255 358
3bge-assembly1.cif.gz_A crystal structure of the c-terminal fragment of aaa+atpase from haemophilus influenzae 0.9336 253 432
3ctd-assembly1.cif.gz_A-2 crystal structure of a putative aaa family atpase from prochlorococcus marinus subsp. pastoris 0.9293 255 426
3ctd-assembly1.cif.gz_B-2 crystal structure of a putative aaa family atpase from prochlorococcus marinus subsp. pastoris 0.9282 255 428
3ctd-assembly1.cif.gz_B-2 crystal structure of a putative aaa family atpase from prochlorococcus marinus subsp. pastoris 0.9171 255 428
ID Description Score Start End Superfamily
3pvsB03 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9955 256 345 1.20.272.10
af_Q8IIN7_541_638_1.20.272.10 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9844 252 347 1.20.272.10
af_A0A1D8PCY7_414_516_1.20.272.10 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9829 253 345 1.20.272.10
3bgeA01 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9791 253 347 1.20.272.10
af_P40151_125_295_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.977 24 172 3.40.50.300
ID Description Score Start End GO Terms
AF-W1VGH2-F1-model_v4 Recombination factor protein RarA 0.9946 34 167 GO:0000731
GO:0005524
GO:0006261
GO:0008047
GO:0016887
GO:0017116
AF-A0A3B9RLT2-F1-model_v4 deleted 0.9886 21 176
AF-W1VGH2-F1-model_v4 Recombination factor protein RarA 0.9873 34 167 GO:0000731
GO:0005524
GO:0006261
GO:0008047
GO:0016887
GO:0017116
AF-A0A2M7M0F9-F1-model_v4 Recombination factor protein RarA 0.9829 25 192 GO:0000731
GO:0005524
GO:0006261
GO:0008047
GO:0016887
GO:0017116
AF-A0A523ZM47-F1-model_v4 Replication-associated recombination protein A 0.9764 316 434 GO:0000731
GO:0003677
GO:0005524
GO:0006261
GO:0008047
GO:0017116

Map