F255234

General Info

Members Datasets Scaffolds Average Seq Length
169 110 170 212

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0007342|Ga0451577_0007342_10054_10824
Length 256
Sequence LSIKSGEPEITGRDRESVFLVALLDFLGYTPCAMHLIQELLQPLIDWYLSKLQDGGYPLIALLMAVESSILPLPSELVVPPAAHLAAQKGITFFGFHLTGLAAQAGIVIAGAIGSWVGATAMYWASRWAGRPLVMRFGKYFFIPAEKVEGAERWATRYGSFGIFASRLLPVVRHLIGIPAGIVRMDYLKFSIYTLIGSAVWCAVLCWLGVKIGADISKGEMHKVTFWLVVFLAVVGGLYYVFVHRHMKAGKAEKKD

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
19 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
21 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
28 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
29 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
41 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
42 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
43 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
44 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
45 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
46 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
49 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
50 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
51 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
52 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
53 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
54 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
55 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
56 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
57 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
58 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
59 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
60 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
61 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
62 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
63 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
64 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
65 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
66 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
67 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
68 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
69 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
70 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
71 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
72 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
75 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
76 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
77 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
78 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
79 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
80 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
81 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
82 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
83 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
84 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
85 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
86 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
87 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
88 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
89 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
90 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
91 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
92 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
93 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
94 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
95 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
96 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
97 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
98 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
106 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
107 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
109 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
110 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 92.9
Stem 0
Stem Tuber 0
Unclassified 7.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10101565 3300003320 Bacteria 10657
2 rootH2_10257095 3300003320 Unclassified 3293
3 rootL2_10039337 3300003322 Bacteria 4860
4 rootL2_10267752 3300003322 Unclassified 2685
5 rootH1_10023518 3300003323 Bacteria 2969
6 rootH1_10132154 3300003323 Bacteria 3512
7 rootH1_10144953 3300003316 Bacteria 1301
8 rootH1_10144953 3300003323 Unclassified 2749
9 Ga0070683_100043322 3300005329 Bacteria 4148
10 Ga0070690_100254274 3300005330 Bacteria 1244
11 Ga0070687_100113949 3300005343 Unclassified 1535
12 Ga0070688_100316552 3300005365 Unclassified 1132
13 Ga0070688_100562842 3300005365 Bacteria 868
14 Ga0070711_100122607 3300005439 Bacteria 1925
15 Ga0070708_100128995 3300005445 Bacteria 2340
16 Ga0070685_10129147 3300005466 Bacteria 1578
17 Ga0070672_100009844 3300005543 Bacteria 6607
18 Ga0070686_100567769 3300005544 Unclassified 890
19 Ga0068856_100058175 3300005614 Unclassified 3817
20 Ga0068852_100168201 3300005616 Bacteria 2053
21 Ga0068859_100173669 3300005617 Bacteria 2237
22 Ga0068863_100037434 3300005841 Bacteria 4620
23 Ga0068858_100371680 3300005842 Bacteria 1371
24 Ga0070712_100128008 3300006175 Bacteria 1921
25 Ga0097621_100711577 3300006237 Unclassified 925
26 Ga0068871_100043414 3300006358 Bacteria 3611
27 Ga0075436_100217298 3300006914 Bacteria 1356
28 Ga0097620_100043485 3300006931 Bacteria 4514
29 Ga0097620_100173660 3300006931 Bacteria 2237
30 Ga0105240_10110239 3300009093 Bacteria 3332
31 Ga0105242_10617996 3300009176 Bacteria 1049
32 Ga0105248_10954508 3300009177 Bacteria 968
33 Ga0105238_10008574 3300009551 Bacteria 10227
34 Ga0157375_11216888 3300013308 Bacteria 884
35 Ga0157376_10860569 3300014969 Unclassified 922
36 Ga0207705_10965920 3300025909 Unclassified 659
37 Ga0207684_10644008 3300025910 Unclassified 903
38 Ga0207695_10020511 3300025913 Bacteria 7567
39 Ga0207695_10694180 3300025913 Bacteria 898
40 Ga0207694_10116621 3300025924 Unclassified 2128
41 Ga0207694_10158867 3300025924 Bacteria 1825
42 Ga0207670_10815728 3300025936 Unclassified 778
43 Ga0207691_10000356 3300025940 Bacteria 46157
44 Ga0207711_10203339 3300025941 Unclassified 1808
45 Ga0207703_10342679 3300026035 Bacteria 1374
46 Ga0207639_10115995 3300026041 Bacteria 2192
47 Ga0207702_10002467 3300026078 Bacteria 17513
48 Ga0207702_10096609 3300026078 Unclassified 2599
49 Ga0207641_10016262 3300026088 Bacteria 6093
50 Ga0265337_1002217 3300028556 Bacteria 9035
51 Ga0265337_1005389 3300028556 Bacteria 5080
52 Ga0265337_1013362 3300028556 Unclassified 2757
53 Ga0265337_1042450 3300028556 Unclassified 1304
54 Ga0265326_10005928 3300028558 Unclassified 3829
55 Ga0265319_1003557 3300028563 Bacteria 8081
56 Ga0265334_10007872 3300028573 Bacteria 4558
57 Ga0265318_10000007 3300028577 Bacteria 280699
58 Ga0265318_10033138 3300028577 Bacteria 1996
59 Ga0265323_10000465 3300028653 Bacteria 22900
60 Ga0265323_10031816 3300028653 Unclassified 1959
61 Ga0265336_10020683 3300028666 Bacteria 2109
62 Ga0265338_10000279 3300028800 Bacteria 92884
63 Ga0265338_10000701 3300028800 Bacteria 57480
64 Ga0265338_10001459 3300028800 Bacteria 38318
65 Ga0265338_10003664 3300028800 Bacteria 21402
66 Ga0265338_10012515 3300028800 Bacteria 9666
67 Ga0265338_10020741 3300028800 Bacteria 6893
68 Ga0265338_10021812 3300028800 Bacteria 6657
69 Ga0265338_10040159 3300028800 Unclassified 4400
70 Ga0265338_10080087 3300028800 Bacteria 2745
71 Ga0265338_10093562 3300028800 Unclassified 2476
72 Ga0265338_10222148 3300028800 Bacteria 1410
73 Ga0265338_10388085 3300028800 Bacteria 997
74 Ga0265324_10021126 3300029957 Bacteria 2336
75 Ga0265324_10052035 3300029957 Bacteria 1407
76 Ga0265324_10071274 3300029957 Bacteria 1184
77 Ga0265324_10083003 3300029957 Bacteria 1090
78 Ga0265320_10140014 3300031240 Unclassified 1096
79 Ga0265320_10145693 3300031240 Unclassified 1071
80 Ga0265320_10171261 3300031240 Bacteria 975
81 Ga0265331_10139697 3300031250 Bacteria 1102
82 Ga0265327_10000616 3300031251 Bacteria 58773
83 Ga0265327_10000643 3300031251 Bacteria 56654
84 Ga0265327_10056385 3300031251 Bacteria 2025
85 Ga0265327_10169828 3300031251 Bacteria 1003
86 Ga0265316_10047582 3300031344 Unclassified 3392
87 Ga0265316_10620866 3300031344 Unclassified 765
88 Ga0265313_10004046 3300031595 Bacteria 11429
89 Ga0265313_10008278 3300031595 Bacteria 6932
90 Ga0265313_10077224 3300031595 Bacteria 1520
91 Ga0265314_10000594 3300031711 Bacteria 45538
92 Ga0265314_10021042 3300031711 Bacteria 5026
93 Ga0265342_10085371 3300031712 Bacteria 1817
94 Ga0265342_10100183 3300031712 Unclassified 1651
95 Ga0373926_0025971 3300035083 Unclassified 2047
96 Ga0373945_0179418 3300035116 Unclassified 871
97 Ga0373943_0099606 3300035170 Unclassified 1518
98 Ga0373924_0108519 3300035410 Unclassified 1198
99 Ga0373935_0024654 3300035692 Bacteria 3704
100 Ga0373935_0031130 3300035692 Bacteria 3309
101 Ga0373927_0002559 3300035695 Bacteria 13249
102 Ga0373927_0006160 3300035695 Bacteria 8199
103 Ga0373937_0119791 3300036401 Bacteria 2452
104 Ga0373925_0014427 3300037068 Bacteria 5711
105 Ga0373925_0040089 3300037068 Bacteria 3466
106 Ga0436365_1761952 3300039437 Unclassified 760
107 Ga0451849_0428306 3300041505 Unclassified 1291
108 Ga0451851_0209140 3300041507 Bacteria 1482
109 Ga0451843_1142203 3300041509 Bacteria 1434
110 Ga0451853_0368693 3300041512 Bacteria 9645
111 Ga0451577_0007342 3300042876 Bacteria 10843
112 Ga0451577_0010006 3300042876 Bacteria 9086
113 Ga0451577_0141755 3300042876 Unclassified 2160
114 Ga0466966_0224044 3300044684 Bacteria 1135
115 Ga0453684_0000737 3300044712 Bacteria 114674
116 Ga0453684_0007587 3300044712 Bacteria 19882
117 Ga0453684_0015986 3300044712 Bacteria 11794
118 Ga0453684_0203186 3300044712 Bacteria 2308
119 Ga0451576_0038804 3300045051 Bacteria 5041
120 Ga0451576_0141337 3300045051 Unclassified 2510
121 Ga0466967_0006862 3300045976 Bacteria 8127
122 Ga0495592_0000115 3300046454 Bacteria 70181
123 Ga0495580_0469417 3300046472 Unclassified 843
124 Ga0495662_0001330 3300046476 Bacteria 12250
125 Ga0495618_0003385 3300046514 Bacteria 9933
126 Ga0495628_0000050 3300046516 Bacteria 93131
127 Ga0495630_0013265 3300046517 Bacteria 5995
128 Ga0495630_0253214 3300046517 Bacteria 1345
129 Ga0495666_0025282 3300046526 Bacteria 2932
130 Ga0495666_0213720 3300046526 Unclassified 884
131 Ga0495652_0006167 3300046529 Bacteria 11192
132 Ga0495586_0000299 3300046535 Bacteria 31466
133 Ga0495586_0006549 3300046535 Bacteria 6221
134 Ga0495587_0288894 3300046536 Unclassified 918
135 Ga0495645_0104319 3300046543 Bacteria 2013
136 Ga0495645_0258348 3300046543 Unclassified 1155
137 Ga0495667_0051530 3300046559 Unclassified 2715
138 Ga0495634_0075160 3300046642 Eukaryota 2219
139 Ga0495657_0218366 3300046675 Unclassified 1157
140 Ga0495599_0001540 3300046678 Bacteria 13270
141 Ga0495647_0153904 3300046681 Unclassified 987
142 Ga0495658_0172403 3300046683 Bacteria 1339
143 Ga0495613_0046670 3300046689 Eukaryota 3203
144 Ga0495624_0059579 3300046690 Bacteria 2395
145 Ga0495604_0393810 3300047317 Unclassified 913
146 Ga0495674_0017356 3300047319 Bacteria 6697
147 Ga0495680_0248911 3300047322 Unclassified 1260
148 Ga0495675_0049905 3300047444 Unclassified 2659
149 Ga0495684_0125190 3300047471 Eukaryota 1934
150 Ga0501032_0168601 3300049569 Unclassified 1436
151 Ga0501033_0020375 3300049570 Bacteria 5009
152 Ga0501034_0886066 3300049571 Unclassified 781
153 Ga0501037_0063862 3300049573 Bacteria 2684
154 Ga0501046_0004222 3300049580 Bacteria 13074
155 Ga0501046_0052901 3300049580 Bacteria 3199
156 Ga0501046_0087747 3300049580 Bacteria 2396
157 Ga0501047_0035347 3300049581 Bacteria 4827
158 Ga0501047_0107321 3300049581 Unclassified 2674
159 Ga0501047_0130606 3300049581 Bacteria 2392
160 Ga0501048_0230900 3300049582 Unclassified 1313
161 Ga0501048_0246029 3300049582 Unclassified 1269
162 Ga0501070_0115335 3300049586 Bacteria 2219
163 Ga0501083_0008601 3300049744 Bacteria 7203
164 Ga0501035_0017920 3300049822 Bacteria 6530
165 Ga0501044_0000200 3300049823 Bacteria 75710
166 Ga0501044_0012985 3300049823 Bacteria 9017
167 Ga0501044_0218628 3300049823 Bacteria 1856
168 Ga0501044_0531702 3300049823 Unclassified 1074
169 nmdc:mga0n895_180624_c1 3300050512 Bacteria 2141
170 nmdc:mga08x19_372169_c1 3300050514 Unclassified 1000

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035692 Ga0373935_0024654 Ga0373935_0024654_1629_2189 181
2 3300037068 Ga0373925_0014427 Ga0373925_0014427_2163_2723 181
3 3300046526 Ga0495666_0213720 Ga0495666_0213720_217_777 181
4 3300049571 Ga0501034_0886066 Ga0501034_0886066_196_741 181
5 3300045051 Ga0451576_0141337 Ga0451576_0141337_1919_2485 184
6 3300006237 Ga0097621_100711577 Ga0097621_1007115771 186
7 3300028653 Ga0265323_10031816 Ga0265323_100318163 187
8 3300046683 Ga0495658_0172403 Ga0495658_0172403_15_590 191
9 3300006175 Ga0070712_100128008 Ga0070712_1001280082 192
10 3300005445 Ga0070708_100128995 Ga0070708_1001289952 196
11 3300025910 Ga0207684_10644008 Ga0207684_106440081 196
12 3300026041 Ga0207639_10115995 Ga0207639_101159953 196
13 3300042876 Ga0451577_0010006 Ga0451577_0010006_888_1514 197
14 3300044712 Ga0453684_0007587 Ga0453684_0007587_2602_3228 197
15 3300044712 Ga0453684_0015986 Ga0453684_0015986_8909_9553 200
16 3300005343 Ga0070687_100113949 Ga0070687_1001139491 202
17 3300005842 Ga0068858_100371680 Ga0068858_1003716802 202
18 3300006931 Ga0097620_100043485 Ga0097620_1000434854 202
19 3300026035 Ga0207703_10342679 Ga0207703_103426792 202
20 3300049581 Ga0501047_0107321 Ga0501047_0107321_10_624 202
21 3300046517 Ga0495630_0253214 Ga0495630_0253214_416_1066 203
22 3300047317 Ga0495604_0393810 Ga0495604_0393810_216_866 203
23 3300042876 Ga0451577_0141755 Ga0451577_0141755_631_1245 204
24 3300003320 rootH2_10257095 rootH2_102570952 205
25 3300003322 rootL2_10267752 rootL2_102677522 205
26 3300003323 rootH1_10144953 rootH1_101449532 205
27 3300005330 Ga0070690_100254274 Ga0070690_1002542741 205
28 3300005365 Ga0070688_100316552 Ga0070688_1003165521 205
29 3300005543 Ga0070672_100009844 Ga0070672_1000098447 205
30 3300005544 Ga0070686_100567769 Ga0070686_1005677691 205
31 3300005617 Ga0068859_100173669 Ga0068859_1001736692 205
32 3300005841 Ga0068863_100037434 Ga0068863_1000374343 205
33 3300006358 Ga0068871_100043414 Ga0068871_1000434144 205
34 3300006931 Ga0097620_100173660 Ga0097620_1001736602 205
35 3300009093 Ga0105240_10110239 Ga0105240_101102393 205
36 3300009176 Ga0105242_10617996 Ga0105242_106179961 205
37 3300009177 Ga0105248_10954508 Ga0105248_109545082 205
38 3300014969 Ga0157376_10860569 Ga0157376_108605691 205
39 3300025936 Ga0207670_10815728 Ga0207670_108157281 205
40 3300025940 Ga0207691_10000356 Ga0207691_1000035623 205
41 3300026088 Ga0207641_10016262 Ga0207641_100162623 205
42 3300035083 Ga0373926_0025971 Ga0373926_0025971_80_736 205
43 3300035116 Ga0373945_0179418 Ga0373945_0179418_122_754 205
44 3300035170 Ga0373943_0099606 Ga0373943_0099606_375_1007 205
45 3300035410 Ga0373924_0108519 Ga0373924_0108519_122_778 205
46 3300035692 Ga0373935_0031130 Ga0373935_0031130_183_839 205
47 3300035695 Ga0373927_0002559 Ga0373927_0002559_9342_9974 205
48 3300036401 Ga0373937_0119791 Ga0373937_0119791_1436_2092 205
49 3300037068 Ga0373925_0040089 Ga0373925_0040089_1776_2432 205
50 3300041505 Ga0451849_0428306 Ga0451849_0428306_127_750 205
51 3300041507 Ga0451851_0209140 Ga0451851_0209140_318_941 205
52 3300041509 Ga0451843_1142203 Ga0451843_1142203_581_1204 205
53 3300041512 Ga0451853_0368693 Ga0451853_0368693_2865_3488 205
54 3300046472 Ga0495580_0469417 Ga0495580_0469417_138_794 205
55 3300046681 Ga0495647_0153904 Ga0495647_0153904_151_783 205
56 3300006914 Ga0075436_100217298 Ga0075436_1002172982 206
57 3300025913 Ga0207695_10020511 Ga0207695_100205118 206
58 3300028800 Ga0265338_10003664 Ga0265338_1000366423 206
59 3300031240 Ga0265320_10145693 Ga0265320_101456931 206
60 3300045051 Ga0451576_0038804 Ga0451576_0038804_2461_3132 206
61 3300046454 Ga0495592_0000115 Ga0495592_0000115_55154_55774 206
62 3300046476 Ga0495662_0001330 Ga0495662_0001330_6735_7355 206
63 3300046514 Ga0495618_0003385 Ga0495618_0003385_4795_5415 206
64 3300046516 Ga0495628_0000050 Ga0495628_0000050_20895_21515 206
65 3300046517 Ga0495630_0013265 Ga0495630_0013265_575_1195 206
66 3300046526 Ga0495666_0025282 Ga0495666_0025282_909_1529 206
67 3300046529 Ga0495652_0006167 Ga0495652_0006167_6332_6952 206
68 3300046535 Ga0495586_0000299 Ga0495586_0000299_16489_17109 206
69 3300046536 Ga0495587_0288894 Ga0495587_0288894_46_666 206
70 3300046543 Ga0495645_0104319 Ga0495645_0104319_1033_1653 206
71 3300046678 Ga0495599_0001540 Ga0495599_0001540_4854_5474 206
72 3300046690 Ga0495624_0059579 Ga0495624_0059579_360_980 206
73 3300047319 Ga0495674_0017356 Ga0495674_0017356_1009_1629 206
74 3300050514 nmdc:mga08x19_372169_c1 nmdc:mga08x19_372169_c1_230_865 206
75 3300025909 Ga0207705_10965920 Ga0207705_109659201 207
76 3300031240 Ga0265320_10140014 Ga0265320_101400141 207
77 3300031251 Ga0265327_10000643 Ga0265327_1000064321 207
78 3300031595 Ga0265313_10077224 Ga0265313_100772242 207
79 3300031712 Ga0265342_10085371 Ga0265342_100853712 207
80 3300035695 Ga0373927_0006160 Ga0373927_0006160_5941_6579 207
81 3300044684 Ga0466966_0224044 Ga0466966_0224044_157_783 207
82 3300049569 Ga0501032_0168601 Ga0501032_0168601_777_1400 207
83 3300049570 Ga0501033_0020375 Ga0501033_0020375_4348_4971 207
84 3300049573 Ga0501037_0063862 Ga0501037_0063862_70_693 207
85 3300049580 Ga0501046_0004222 Ga0501046_0004222_11302_11925 207
86 3300049581 Ga0501047_0035347 Ga0501047_0035347_2678_3301 207
87 3300049582 Ga0501048_0246029 Ga0501048_0246029_229_852 207
88 3300049586 Ga0501070_0115335 Ga0501070_0115335_1366_1989 207
89 3300049823 Ga0501044_0218628 Ga0501044_0218628_63_686 207
90 3300049823 Ga0501044_0531702 Ga0501044_0531702_63_686 207
91 3300003322 rootL2_10039337 rootL2_100393372 208
92 3300003323 rootH1_10023518 rootH1_100235182 208
93 3300009551 Ga0105238_10008574 Ga0105238_100085742 208
94 3300025924 Ga0207694_10158867 Ga0207694_101588672 208
95 3300028556 Ga0265337_1005389 Ga0265337_10053892 208
96 3300028556 Ga0265337_1042450 Ga0265337_10424503 208
97 3300028558 Ga0265326_10005928 Ga0265326_100059284 208
98 3300028573 Ga0265334_10007872 Ga0265334_100078725 208
99 3300028577 Ga0265318_10000007 Ga0265318_10000007140 208
100 3300028800 Ga0265338_10012515 Ga0265338_100125156 208
101 3300028800 Ga0265338_10040159 Ga0265338_100401593 208
102 3300028800 Ga0265338_10080087 Ga0265338_100800873 208
103 3300028800 Ga0265338_10388085 Ga0265338_103880851 208
104 3300029957 Ga0265324_10071274 Ga0265324_100712742 208
105 3300031240 Ga0265320_10171261 Ga0265320_101712612 208
106 3300031251 Ga0265327_10000616 Ga0265327_1000061641 208
107 3300031251 Ga0265327_10056385 Ga0265327_100563853 208
108 3300031251 Ga0265327_10169828 Ga0265327_101698281 208
109 3300031595 Ga0265313_10004046 Ga0265313_1000404611 208
110 3300031595 Ga0265313_10008278 Ga0265313_100082786 208
111 3300031711 Ga0265314_10000594 Ga0265314_1000059411 208
112 3300031711 Ga0265314_10021042 Ga0265314_100210427 208
113 3300042876 Ga0451577_0007342 Ga0451577_0007342_10054_10824 208
114 3300044712 Ga0453684_0000737 Ga0453684_0000737_94170_94940 208
115 3300044712 Ga0453684_0203186 Ga0453684_0203186_518_1144 208
116 3300045976 Ga0466967_0006862 Ga0466967_0006862_7181_7819 208
117 3300049744 Ga0501083_0008601 Ga0501083_0008601_4738_5364 208
118 3300049823 Ga0501044_0012985 Ga0501044_0012985_2219_2872 208
119 3300050512 nmdc:mga0n895_180624_c1 nmdc:mga0n895_180624_c1_815_1441 208
120 3300003323 rootH1_10132154 rootH1_101321545 209
121 3300005329 Ga0070683_100043322 Ga0070683_1000433225 209
122 3300005439 Ga0070711_100122607 Ga0070711_1001226073 209
123 3300005616 Ga0068852_100168201 Ga0068852_1001682011 209
124 3300013308 Ga0157375_11216888 Ga0157375_112168882 209
125 3300025913 Ga0207695_10694180 Ga0207695_106941802 209
126 3300025924 Ga0207694_10116621 Ga0207694_101166212 209
127 3300025941 Ga0207711_10203339 Ga0207711_102033393 209
128 3300026078 Ga0207702_10002467 Ga0207702_1000246711 209
129 3300028556 Ga0265337_1002217 Ga0265337_100221711 209
130 3300028556 Ga0265337_1013362 Ga0265337_10133623 209
131 3300028563 Ga0265319_1003557 Ga0265319_100355712 209
132 3300028577 Ga0265318_10033138 Ga0265318_100331382 209
133 3300028653 Ga0265323_10000465 Ga0265323_1000046519 209
134 3300028666 Ga0265336_10020683 Ga0265336_100206832 209
135 3300028800 Ga0265338_10000279 Ga0265338_1000027958 209
136 3300028800 Ga0265338_10000701 Ga0265338_1000070123 209
137 3300028800 Ga0265338_10001459 Ga0265338_1000145928 209
138 3300028800 Ga0265338_10020741 Ga0265338_100207413 209
139 3300028800 Ga0265338_10021812 Ga0265338_100218124 209
140 3300028800 Ga0265338_10093562 Ga0265338_100935622 209
141 3300028800 Ga0265338_10222148 Ga0265338_102221482 209
142 3300029957 Ga0265324_10021126 Ga0265324_100211262 209
143 3300029957 Ga0265324_10052035 Ga0265324_100520352 209
144 3300029957 Ga0265324_10083003 Ga0265324_100830031 209
145 3300031250 Ga0265331_10139697 Ga0265331_101396972 209
146 3300031344 Ga0265316_10047582 Ga0265316_100475822 209
147 3300031344 Ga0265316_10620866 Ga0265316_106208661 209
148 3300031712 Ga0265342_10100183 Ga0265342_101001832 209
149 3300039437 Ga0436365_1761952 Ga0436365_1761952_102_734 209
150 3300046535 Ga0495586_0006549 Ga0495586_0006549_836_1465 209
151 3300046543 Ga0495645_0258348 Ga0495645_0258348_335_973 209
152 3300049580 Ga0501046_0052901 Ga0501046_0052901_2439_3149 209
153 3300049580 Ga0501046_0087747 Ga0501046_0087747_921_1631 209
154 3300049581 Ga0501047_0130606 Ga0501047_0130606_766_1476 209
155 3300049582 Ga0501048_0230900 Ga0501048_0230900_480_1190 209
156 3300049822 Ga0501035_0017920 Ga0501035_0017920_4502_5212 209
157 3300049823 Ga0501044_0000200 Ga0501044_0000200_25845_26555 209
158 3300003320 rootH2_10101565 rootH2_101015656 210
159 3300005365 Ga0070688_100562842 Ga0070688_1005628421 210
160 3300005466 Ga0070685_10129147 Ga0070685_101291472 210
161 3300005614 Ga0068856_100058175 Ga0068856_1000581752 210
162 3300026078 Ga0207702_10096609 Ga0207702_100966093 210
163 3300046559 Ga0495667_0051530 Ga0495667_0051530_334_987 210
164 3300046642 Ga0495634_0075160 Ga0495634_0075160_592_1245 210
165 3300046675 Ga0495657_0218366 Ga0495657_0218366_176_829 210
166 3300046689 Ga0495613_0046670 Ga0495613_0046670_1582_2235 210
167 3300047322 Ga0495680_0248911 Ga0495680_0248911_316_969 210
168 3300047444 Ga0495675_0049905 Ga0495675_0049905_1512_2165 210
169 3300047471 Ga0495684_0125190 Ga0495684_0125190_275_928 210

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09335

VTT_dom

VTT domain

79

211

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
4nsl-assembly1.cif.gz_D x-ray crystal structure of adenylosuccinate lyase from salmonella typhimurium 0.3119 58 169
7t24-assembly1.cif.gz_A crystal structure of adenylosuccinate lyase (asl) from pseudomonas aeruginosa 0.3085 58 169
6t1z-assembly1.cif.gz_A lmrp from l. lactis, in an outward-open conformation, bound to hoechst 33342 0.2842 12 162
3tds-assembly1.cif.gz_E crystal structure of hsc f194i 0.2833 1 169
4onr-assembly1.cif.gz_A crystal structure of borrelia burgdorferi decorin-binding protein dbpa 0.2802 4 172
ID Description Score Start End Superfamily
af_P0ADR0_21_135_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.7726 45 166 1.10.1760.20
af_P0ADR0_21_135_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.7427 45 166 1.10.1760.20
af_A0A1D6FNG9_40_192_1.20.140.40 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Invertase/pectin methylesterase inhibitor family protein 0.3212 42 162 1.20.140.40
2ptsA02 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.3082 58 169 1.20.200.10
af_Q5A9E8_53_522_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2992 21 201 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A089N5R5-F1-model_v4 Membrane protein 0.9275 11 171 GO:0005886
AF-A0A2V5SYP6-F1-model_v4 DedA family protein 0.9227 7 168 GO:0005886
AF-A0A089N5R5-F1-model_v4 Membrane protein 0.906 11 171 GO:0005886
AF-A0A2V5SYP6-F1-model_v4 DedA family protein 0.9012 7 168 GO:0005886
AF-A0A1V6GCL9-F1-model_v4 deleted 0.8973 1 210

Feature Viewer

pLDDT pTM Quality
72.06 0.68 Medium
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Predicted Structure (AlphaFold2)

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