F255030

General Info

Members Datasets Scaffolds Average Seq Length
169 125 338 246

Family's Representative Sequence

Representative Sequence 3300031730|Ga0307516_10008530|Ga0307516_100085309
Length 260
Sequence MFSKATKFIALCALGAGAGTAFGMKTQCSASSGPLITPVLELYTSEGCSSCPPADTWASGLKGKNLLVQAFHVGYWDYIGWVDRFAAPAHTARQRELAGSNQLRNIYTPQVLLNGRDWPQWGGAPSRLADAREPARAHITLTRLADDQFEATVTPAAGTPAWAAYWTVTEHGHNSRVKAGENAGQFLKHDFVVRQYTQAGEYKNRNSGASPGGEPVPIKLGFRSIAATPGHERQINLVVFAPQSGKTLQAVSLSCPGETS

Samples

Sample ID Description Type Environment
1 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
7 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
8 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
11 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
12 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
13 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
14 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
15 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
16 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
17 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
18 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
19 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
20 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
21 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
22 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
23 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
38 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
50 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
51 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
52 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
53 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
54 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
55 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
56 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
59 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
64 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
83 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
84 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
85 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
86 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
87 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
88 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
89 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
90 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
91 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
92 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
93 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
94 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
95 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
96 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
97 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
98 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
99 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
100 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
101 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
102 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
103 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
104 3300042119 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218L_E14_082316_1902 Metagenome Rhizosphere
105 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
106 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
107 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
108 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
109 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
110 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
111 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
112 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
117 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
118 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
119 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
120 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
121 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
122 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
123 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
124 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
125 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.41
Metatranscriptomes 0
Isolates 0.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 40.24
Nodule 0
Rhizoplane 1.18
Rhizosphere 50.89
Stem 0
Stem Tuber 0
Unclassified 1.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307516_10008530 3300031730 Bacteria 11578
2 JGI25155J39150_1000002 3300002704 Bacteria 292156
3 JGI25156J39149_1000003 3300002705 Bacteria 305434
4 JGI25154J39366_1000009 3300002738 Bacteria 305408
5 JGI25157J39369_1000002 3300002741 Bacteria 305434
6 JGI25150J39212_1002865 3300002774 Bacteria 4175
7 JGI25159J45721_1000302 3300002987 Bacteria 23151
8 JGI25159J45721_1000502 3300002987 Bacteria 17895
9 JGI25151J46595_10004668 3300003187 Bacteria 7207
10 JGI25160J50197_1000145 3300003354 Bacteria 63479
11 JGI25161J50226_1000032 3300003374 Bacteria 138440
12 JGI25161J50226_1000064 3300003374 Bacteria 99448
13 Ga0055526_1003327 3300003771 Bacteria 10280
14 Ga0055526_1003799 3300003771 Bacteria 9395
15 Ga0055537_1000043 3300003773 Bacteria 90816
16 Ga0055524_1000012 3300003775 Bacteria 260384
17 Ga0055536_1007260 3300003781 Bacteria 4991
18 Ga0055534_1001104 3300003784 Bacteria 11479
19 Ga0055528_1000717 3300003790 Bacteria 23401
20 Ga0055530_10000015 3300003791 Bacteria 148790
21 Ga0055540_1000012 3300003792 Bacteria 262667
22 Ga0055540_1000039 3300003792 Bacteria 161844
23 Ga0055531_10004088 3300003794 Bacteria 9030
24 Ga0055543_1000850 3300004625 Bacteria 14747
25 Ga0065165_1009252 3300005262 Bacteria 4447
26 Ga0065165_1025049 3300005262 Bacteria 1992
27 Ga0070658_10490921 3300005327 Bacteria 1060
28 Ga0068868_100018824 3300005338 Bacteria 5167
29 Ga0070659_100553264 3300005366 Bacteria 985
30 Ga0070700_100375348 3300005441 Unclassified 1062
31 Ga0068867_100040516 3300005459 Bacteria 3400
32 Ga0070685_10081462 3300005466 Bacteria 1941
33 Ga0070693_100036282 3300005547 Bacteria 2739
34 Ga0068855_100243468 3300005563 Bacteria 2009
35 Ga0068856_100045296 3300005614 Bacteria 4331
36 Ga0068851_10232793 3300005834 Bacteria 1039
37 Ga0068858_100004049 3300005842 Bacteria 14452
38 Ga0075365_10176640 3300006038 Bacteria 1492
39 Ga0075368_10005080 3300006042 Bacteria 4506
40 Ga0075363_100108154 3300006048 Bacteria 1544
41 Ga0075364_10044319 3300006051 Bacteria 2893
42 Ga0075362_10010366 3300006177 Bacteria 3637
43 Ga0075362_10203286 3300006177 Bacteria 965
44 Ga0075367_10004210 3300006178 Bacteria 6982
45 Ga0075366_10043333 3300006195 Bacteria 2666
46 Ga0075370_10161505 3300006353 Bacteria 1315
47 Ga0075370_10195866 3300006353 Bacteria 1191
48 Ga0068865_100044313 3300006881 Bacteria 3045
49 Ga0105245_10074002 3300009098 Bacteria 3099
50 Ga0105242_10005596 3300009176 Bacteria 9697
51 Ga0105248_10096321 3300009177 Bacteria 3333
52 Ga0157372_11103880 3300013307 Bacteria 918
53 Ga0182008_10097742 3300014497 Bacteria 1449
54 Ga0182008_10119058 3300014497 Bacteria 1312
55 Ga0157379_10194918 3300014968 Bacteria 1831
56 Ga0157376_10012516 3300014969 Bacteria 6298
57 Ga0182006_1130362 3300015261 Bacteria 865
58 Ga0209435_100001 3300025206 Bacteria 1424171
59 Ga0207425_1002198 3300025245 Bacteria 7097
60 Ga0207425_1003254 3300025245 Bacteria 5297
61 Ga0209646_1000001 3300025246 Bacteria 3092932
62 Ga0209026_1000003 3300025250 Bacteria 1060571
63 Ga0209759_1000001 3300025256 Bacteria 2799452
64 Ga0209129_1016928 3300025258 Bacteria 1447
65 Ga0209565_1000004 3300025263 Bacteria 983150
66 Ga0209565_1000407 3300025263 Bacteria 35850
67 Ga0209673_1000357 3300025273 Bacteria 82249
68 Ga0209130_1000082 3300025284 Bacteria 164441
69 Ga0209130_1000094 3300025284 Bacteria 145569
70 Ga0209675_1000061 3300025291 Bacteria 181096
71 Ga0209675_1001324 3300025291 Bacteria 14690
72 Ga0209675_1013933 3300025291 Bacteria 2478
73 Ga0209676_1000029 3300025292 Bacteria 520536
74 Ga0209676_1019991 3300025292 Bacteria 2288
75 Ga0209025_1003720 3300025294 Bacteria 14007
76 Ga0209025_1016547 3300025294 Bacteria 4336
77 Ga0209025_1080294 3300025294 Bacteria 1111
78 Ga0209564_1000969 3300025295 Bacteria 36292
79 Ga0209564_1001231 3300025295 Bacteria 28910
80 Ga0209564_1002323 3300025295 Bacteria 15406
81 Ga0209758_1011396 3300025297 Bacteria 5156
82 Ga0209050_1000003 3300025298 Bacteria 1609245
83 Ga0209050_1010987 3300025298 Bacteria 4369
84 Ga0209050_1020723 3300025298 Bacteria 2431
85 Ga0209256_1000001 3300025299 Bacteria 2166974
86 Ga0207426_1000025 3300025302 Bacteria 532921
87 Ga0207426_1003454 3300025302 Bacteria 8560
88 Ga0209051_1000003 3300025303 Bacteria 1609245
89 Ga0209257_1000018 3300025304 Bacteria 836016
90 Ga0207652_10227012 3300025921 Bacteria 1683
91 Ga0207686_10008257 3300025934 Bacteria 5616
92 Ga0207704_10127028 3300025938 Bacteria 1758
93 Ga0207711_10044286 3300025941 Bacteria 3798
94 Ga0207689_10226938 3300025942 Bacteria 1544
95 Ga0207651_10159601 3300025960 Bacteria 1766
96 Ga0207677_10008329 3300026023 Bacteria 5784
97 Ga0207703_10006836 3300026035 Bacteria 9083
98 Ga0207708_10060331 3300026075 Bacteria 2895
99 Ga0207702_10069659 3300026078 Bacteria 3024
100 Ga0207648_10053671 3300026089 Bacteria 3522
101 Ga0207648_10061697 3300026089 Bacteria 3269
102 Ga0207674_10152687 3300026116 Bacteria 2266
103 Ga0207683_10023321 3300026121 Bacteria 5322
104 Ga0265330_10060015 3300031235 Bacteria 1656
105 Ga0265340_10203735 3300031247 Bacteria 889
106 Ga0265316_10203949 3300031344 Bacteria 1465
107 Ga0307513_10000019 3300031456 Bacteria 231194
108 Ga0307513_10000051 3300031456 Bacteria 149733
109 Ga0307408_100157706 3300031548 Bacteria 1799
110 Ga0307408_100520137 3300031548 Bacteria 1045
111 Ga0265314_10008847 3300031711 Bacteria 8596
112 Ga0265314_10027216 3300031711 Bacteria 4284
113 Ga0265342_10051345 3300031712 Bacteria 2461
114 Ga0307516_10345146 3300031730 Bacteria 1155
115 Ga0307406_10365681 3300031901 Bacteria 1132
116 Ga0373929_0024621 3300035085 Bacteria 1245
117 Ga0373931_0096099 3300035691 Bacteria 1659
118 Ga0395899_0001240 3300037312 Bacteria 22229
119 Ga0395900_0054965 3300037418 Bacteria 4099
120 Ga0395898_0011839 3300037466 Bacteria 9037
121 Ga0395898_0033566 3300037466 Bacteria 5120
122 Ga0395905_0000148 3300037471 Bacteria 116301
123 Ga0395905_0000443 3300037471 Bacteria 58027
124 Ga0395905_0020362 3300037471 Bacteria 6284
125 Ga0395905_0031411 3300037471 Bacteria 4999
126 Ga0395905_0032764 3300037471 Bacteria 4885
127 Ga0395905_0094774 3300037471 Bacteria 2800
128 Ga0395905_0189176 3300037471 Bacteria 1931
129 Ga0395905_0696659 3300037471 Unclassified 918
130 Ga0395901_0048548 3300038443 Bacteria 4408
131 Ga0395901_0068536 3300038443 Bacteria 3696
132 Ga0395901_0108586 3300038443 Bacteria 2913
133 Ga0395901_0253927 3300038443 Bacteria 1831
134 Ga0395901_0469794 3300038443 Bacteria 1284
135 Ga0439466_0051740 3300041411 Bacteria 1344
136 Ga0451791_0341053 3300041451 Bacteria 1728
137 Ga0451851_1094457 3300041507 Bacteria 1295
138 Ga0439433_0030528 3300041999 Bacteria 1232
139 Ga0439449_0001507 3300042007 Bacteria 9126
140 Ga0439457_040992 3300042014 Bacteria 1032
141 Ga0439462_0004160 3300042015 Bacteria 3518
142 Ga0450915_003172 3300042119 Bacteria 910
143 Ga0466969_0003895 3300044656 Bacteria 7920
144 Ga0466969_0284039 3300044656 Bacteria 749
145 Ga0466972_0125552 3300044658 Bacteria 1209
146 Ga0466972_0239678 3300044658 Bacteria 848
147 Ga0466966_0002689 3300044684 Bacteria 11648
148 Ga0466961_0066356 3300044693 Bacteria 2292
149 Ga0466970_0048250 3300044765 Bacteria 2270
150 Ga0466970_0278245 3300044765 Bacteria 941
151 Ga0466967_0535214 3300045976 Bacteria 1152
152 Ga0495588_0160612 3300046674 Bacteria 1189
153 Ga0496108_0559757 3300048911 Bacteria 997
154 Ga0501038_0101738 3300049574 Bacteria 2392
155 Ga0501043_0044079 3300049579 Bacteria 3507
156 Ga0501047_0024021 3300049581 Bacteria 5854
157 Ga0501047_0120713 3300049581 Bacteria 2503
158 Ga0501073_0054023 3300049589 Bacteria 2813
159 Ga0501035_0109577 3300049822 Bacteria 2420
160 nmdc:mga00v17_60453_c1 3300050491 Bacteria 2327
161 nmdc:mga0yw44_124110_c1 3300050492 Bacteria 1666
162 nmdc:mga0yw44_4465_c1 3300050492 Bacteria 6420
163 nmdc:mga07m45_64206_c1 3300050496 Bacteria 2083
164 Ga0500644_0022462 3300053088 Bacteria 1902
165 Ga0500593_001913 3300053117 Bacteria 7503
166 Ga0500645_047888 3300053730 Bacteria 1252
167 Ga0500645_092844 3300053730 Bacteria 855
168 Ga0500661_005494 3300055283 Bacteria 2366
169 2511247012 2511231002 Bacteria 5042903
170 Ga0307516_10008530
171 JGI25155J39150_1000002
172 JGI25156J39149_1000003
173 JGI25154J39366_1000009
174 JGI25157J39369_1000002
175 JGI25150J39212_1002865
176 JGI25159J45721_1000302
177 JGI25159J45721_1000502
178 JGI25151J46595_10004668
179 JGI25160J50197_1000145
180 JGI25161J50226_1000032
181 JGI25161J50226_1000064
182 Ga0055526_1003327
183 Ga0055526_1003799
184 Ga0055537_1000043
185 Ga0055524_1000012
186 Ga0055536_1007260
187 Ga0055534_1001104
188 Ga0055528_1000717
189 Ga0055530_10000015
190 Ga0055540_1000012
191 Ga0055540_1000039
192 Ga0055531_10004088
193 Ga0055543_1000850
194 Ga0065165_1009252
195 Ga0065165_1025049
196 Ga0070658_10490921
197 Ga0068868_100018824
198 Ga0070659_100553264
199 Ga0070700_100375348
200 Ga0068867_100040516
201 Ga0070685_10081462
202 Ga0070693_100036282
203 Ga0068855_100243468
204 Ga0068856_100045296
205 Ga0068851_10232793
206 Ga0068858_100004049
207 Ga0075365_10176640
208 Ga0075368_10005080
209 Ga0075363_100108154
210 Ga0075364_10044319
211 Ga0075362_10010366
212 Ga0075362_10203286
213 Ga0075367_10004210
214 Ga0075366_10043333
215 Ga0075370_10161505
216 Ga0075370_10195866
217 Ga0068865_100044313
218 Ga0105245_10074002
219 Ga0105242_10005596
220 Ga0105248_10096321
221 Ga0157372_11103880
222 Ga0182008_10097742
223 Ga0182008_10119058
224 Ga0157379_10194918
225 Ga0157376_10012516
226 Ga0182006_1130362
227 Ga0209435_100001
228 Ga0207425_1002198
229 Ga0207425_1003254
230 Ga0209646_1000001
231 Ga0209026_1000003
232 Ga0209759_1000001
233 Ga0209129_1016928
234 Ga0209565_1000004
235 Ga0209565_1000407
236 Ga0209673_1000357
237 Ga0209130_1000082
238 Ga0209130_1000094
239 Ga0209675_1000061
240 Ga0209675_1001324
241 Ga0209675_1013933
242 Ga0209676_1000029
243 Ga0209676_1019991
244 Ga0209025_1003720
245 Ga0209025_1016547
246 Ga0209025_1080294
247 Ga0209564_1000969
248 Ga0209564_1001231
249 Ga0209564_1002323
250 Ga0209758_1011396
251 Ga0209050_1000003
252 Ga0209050_1010987
253 Ga0209050_1020723
254 Ga0209256_1000001
255 Ga0207426_1000025
256 Ga0207426_1003454
257 Ga0209051_1000003
258 Ga0209257_1000018
259 Ga0207652_10227012
260 Ga0207686_10008257
261 Ga0207704_10127028
262 Ga0207711_10044286
263 Ga0207689_10226938
264 Ga0207651_10159601
265 Ga0207677_10008329
266 Ga0207703_10006836
267 Ga0207708_10060331
268 Ga0207702_10069659
269 Ga0207648_10053671
270 Ga0207648_10061697
271 Ga0207674_10152687
272 Ga0207683_10023321
273 Ga0265330_10060015
274 Ga0265340_10203735
275 Ga0265316_10203949
276 Ga0307513_10000019
277 Ga0307513_10000051
278 Ga0307408_100157706
279 Ga0307408_100520137
280 Ga0265314_10008847
281 Ga0265314_10027216
282 Ga0265342_10051345
283 Ga0307516_10345146
284 Ga0307406_10365681
285 Ga0373929_0024621
286 Ga0373931_0096099
287 Ga0395899_0001240
288 Ga0395900_0054965
289 Ga0395898_0011839
290 Ga0395898_0033566
291 Ga0395905_0000148
292 Ga0395905_0000443
293 Ga0395905_0020362
294 Ga0395905_0031411
295 Ga0395905_0032764
296 Ga0395905_0094774
297 Ga0395905_0189176
298 Ga0395905_0696659
299 Ga0395901_0048548
300 Ga0395901_0068536
301 Ga0395901_0108586
302 Ga0395901_0253927
303 Ga0395901_0469794
304 Ga0439466_0051740
305 Ga0451791_0341053
306 Ga0451851_1094457
307 Ga0439433_0030528
308 Ga0439449_0001507
309 Ga0439457_040992
310 Ga0439462_0004160
311 Ga0450915_003172
312 Ga0466969_0003895
313 Ga0466969_0284039
314 Ga0466972_0125552
315 Ga0466972_0239678
316 Ga0466966_0002689
317 Ga0466961_0066356
318 Ga0466970_0048250
319 Ga0466970_0278245
320 Ga0466967_0535214
321 Ga0495588_0160612
322 Ga0496108_0559757
323 Ga0501038_0101738
324 Ga0501043_0044079
325 Ga0501047_0024021
326 Ga0501047_0120713
327 Ga0501073_0054023
328 Ga0501035_0109577
329 nmdc:mga00v17_60453_c1
330 nmdc:mga0yw44_124110_c1
331 nmdc:mga0yw44_4465_c1
332 nmdc:mga07m45_64206_c1
333 Ga0500644_0022462
334 Ga0500593_001913
335 Ga0500645_047888
336 Ga0500645_092844
337 Ga0500661_005494
338 2511247012

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06764

DUF1223

Protein of unknown function (DUF1223)

39

220

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2he3-assembly1.cif.gz_A crystal structure of the selenocysteine to cysteine mutant of human glutathionine peroxidase 2 (gpx2) 0.8313 39 73
4q6z-assembly1.cif.gz_A lpob c-terminal domain from escherichia coli 0.6874 226 251
2axo-assembly1.cif.gz_A-2 x-ray crystal structure of protein agr_c_4864 from agrobacterium tumefaciens. northeast structural genomics consortium target atr35. 0.677 34 248
2axo-assembly1.cif.gz_A-2 x-ray crystal structure of protein agr_c_4864 from agrobacterium tumefaciens. northeast structural genomics consortium target atr35. 0.6504 34 248
2h70-assembly2.cif.gz_B crystal structure of thioredoxin mutant d9e in hexagonal (p61) space group 0.6398 36 119
ID Description Score Start End Superfamily
2he3A00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8313 39 73 3.40.30.10
af_Q5A1M0_1_146_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.7245 35 72 3.40.30.10
af_I1LUV6_45_256_2.60.40.640 Mainly Beta;Sandwich;Immunoglobulin-like; 0.7183 42 234 2.60.40.640
af_Q5DJV7_60_178_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.7099 38 115 3.40.30.10
af_Q2G066_1_106_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.7076 39 120 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A539D7C2-F1-model_v4 DUF1223 domain-containing protein 0.9515 39 120 GO:0016020
AF-A0A0L6T6H4-F1-model_v4 DUF1223 domain-containing protein 0.9409 29 249
AF-A0A0L6T6H4-F1-model_v4 DUF1223 domain-containing protein 0.9168 29 249
AF-A0A1F4HAN5-F1-model_v4 deleted 0.9099 29 250
AF-A0A537URP3-F1-model_v4 DUF1223 domain-containing protein 0.8984 34 118

Map