F254813

General Info

Members Datasets Scaffolds Average Seq Length
169 67 338 134

Family's Representative Sequence

Representative Sequence 3300021388|Ga0213875_10123616|Ga0213875_101236162
Length 145
Sequence MPNGWHVASTVPFKLVTPTEIVFEGDAELVIAVTTEGEEGILPHHAPFLAALKPGVLRANVLVGAASSRLELATSEGFMQALPDRVTVLVDEAARFEDVVVAEARQALAEATERQKTAGDDAARYAREQAIIDFANAKLRLTGHK

Samples

Sample ID Description Type Environment
1 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
15 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
16 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
17 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
18 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
19 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
20 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
21 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
22 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
23 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
24 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
36 3300028023 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 Metagenome Rhizosphere
37 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
38 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
39 3300030763 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
40 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
41 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
42 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
43 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
44 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
45 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
46 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
47 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
48 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
51 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
52 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
53 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
54 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
55 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
56 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
57 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
58 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
59 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
60 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
61 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
62 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
63 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
64 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
65 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
66 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.04
Metatranscriptomes 2.96
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 75.74
Stem 0
Stem Tuber 0
Unclassified 14.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213875_10123616 3300021388 Bacteria 1209
2 Ga0070683_100159749 3300005329 Bacteria 2138
3 Ga0070682_100550803 3300005337 Bacteria 902
4 Ga0070691_10002222 3300005341 Bacteria 8586
5 Ga0070661_100760747 3300005344 Bacteria 793
6 Ga0070714_100000120 3300005435 Bacteria 63044
7 Ga0070714_100328328 3300005435 Bacteria 1432
8 Ga0070714_100937729 3300005435 Bacteria 841
9 Ga0070713_100732903 3300005436 Bacteria 945
10 Ga0070713_101581132 3300005436 Unclassified 636
11 Ga0070710_10258412 3300005437 Bacteria 1122
12 Ga0070663_100013204 3300005455 Bacteria 5255
13 Ga0070679_100182453 3300005530 Bacteria 2071
14 Ga0068853_100057232 3300005539 Bacteria 3364
15 Ga0068854_100000002 3300005578 Bacteria 362695
16 Ga0070717_10343756 3300006028 Bacteria 1333
17 Ga0070712_100399370 3300006175 Unclassified 1135
18 Ga0105240_10113575 3300009093 Bacteria 3273
19 Ga0105240_10159387 3300009093 Bacteria 2682
20 Ga0157374_10407505 3300013296 Bacteria 1357
21 Ga0157372_11606262 3300013307 Bacteria 748
22 Ga0206356_10600788 3300020070 Viruses 620
23 Ga0213873_10004476 3300021358 Bacteria 2612
24 Ga0213873_10004903 3300021358 Bacteria 2528
25 Ga0213873_10076628 3300021358 Unclassified 929
26 Ga0213872_10014183 3300021361 Bacteria 3722
27 Ga0213872_10032585 3300021361 Bacteria 2388
28 Ga0213872_10039831 3300021361 Bacteria 2144
29 Ga0213872_10115557 3300021361 Bacteria 1189
30 Ga0213872_10229695 3300021361 Bacteria 787
31 Ga0213872_10293870 3300021361 Unclassified 676
32 Ga0213872_10344564 3300021361 Unclassified 612
33 Ga0213874_10000165 3300021377 Bacteria 11815
34 Ga0213874_10031693 3300021377 Bacteria 1531
35 Ga0213876_10002655 3300021384 Bacteria 10438
36 Ga0213876_10003401 3300021384 Bacteria 9107
37 Ga0213876_10678230 3300021384 Unclassified 548
38 Ga0213875_10000001 3300021388 Bacteria 2793540
39 Ga0213875_10008831 3300021388 Bacteria 5143
40 Ga0213875_10021621 3300021388 Bacteria 3079
41 Ga0213875_10119960 3300021388 Bacteria 1229
42 Ga0213875_10137405 3300021388 Bacteria 1143
43 Ga0213875_10317098 3300021388 Bacteria 739
44 Ga0213875_10355206 3300021388 Bacteria 696
45 Ga0213871_10018553 3300021441 Bacteria 1703
46 Ga0213871_10025934 3300021441 Bacteria 1496
47 Ga0213871_10134660 3300021441 Bacteria 744
48 Ga0207692_10292191 3300025898 Bacteria 989
49 Ga0207707_11225592 3300025912 Bacteria 606
50 Ga0207695_10087172 3300025913 Bacteria 3145
51 Ga0207695_10510921 3300025913 Bacteria 1083
52 Ga0207652_10099172 3300025921 Bacteria 2570
53 Ga0207664_10005445 3300025929 Bacteria 8703
54 Ga0207664_10073394 3300025929 Bacteria 2761
55 Ga0207664_10154542 3300025929 Bacteria 1952
56 Ga0207664_10165718 3300025929 Bacteria 1888
57 Ga0207664_10359523 3300025929 Bacteria 1290
58 Ga0207661_10028470 3300025944 Bacteria 4279
59 Ga0207667_10003255 3300025949 Bacteria 20034
60 Ga0207667_10024937 3300025949 Bacteria 6556
61 Ga0207640_10000006 3300025981 Bacteria 313289
62 Ga0207639_10010570 3300026041 Bacteria 6394
63 Ga0207678_10077955 3300026067 Bacteria 2838
64 Ga0207702_10429473 3300026078 Bacteria 1279
65 Ga0265356_1000005 3300028017 Bacteria 35950
66 Ga0265357_1010644 3300028023 Bacteria 928
67 Ga0265338_10000238 3300028800 Bacteria 101800
68 Ga0265338_10038232 3300028800 Bacteria 4551
69 Ga0265762_1027213 3300030760 Bacteria 1072
70 Ga0265763_1009549 3300030763 Bacteria 883
71 Ga0265770_1005762 3300030878 Bacteria 1713
72 Ga0265760_10076865 3300031090 Bacteria 1030
73 Ga0265330_10205853 3300031235 Bacteria 831
74 Ga0265332_10016338 3300031238 Bacteria 3275
75 Ga0265325_10000113 3300031241 Bacteria 55789
76 Ga0265325_10001349 3300031241 Bacteria 17384
77 Ga0265325_10005436 3300031241 Bacteria 7864
78 Ga0265340_10009359 3300031247 Bacteria 5262
79 Ga0265339_10019678 3300031249 Bacteria 3958
80 Ga0265339_10501892 3300031249 Archaea 560
81 Ga0265331_10085823 3300031250 Bacteria 1458
82 Ga0265327_10069285 3300031251 Bacteria 1771
83 Ga0265316_10012247 3300031344 Bacteria 7696
84 Ga0265316_10089830 3300031344 Bacteria 2344
85 Ga0265313_10000304 3300031595 Bacteria 53361
86 Ga0265342_10002456 3300031712 Bacteria 15976
87 Ga0265342_10006960 3300031712 Bacteria 8357
88 Ga0265342_10204272 3300031712 Bacteria 1072
89 Ga0373937_0888024 3300036401 Unclassified 840
90 Ga0395900_0112984 3300037418 Bacteria 2788
91 Ga0395900_1929359 3300037418 Unclassified 501
92 Ga0395898_0007642 3300037466 Bacteria 11476
93 Ga0436364_0027435 3300037853 Bacteria 3534
94 Ga0436364_0133586 3300037853 Bacteria 3466
95 Ga0436364_0273345 3300037853 Bacteria 2794207
96 Ga0436364_0555552 3300037853 Bacteria 791
97 Ga0436364_0661057 3300037853 Bacteria 2609
98 Ga0436364_0872102 3300037853 Unclassified 791
99 Ga0436364_0884697 3300037853 Unclassified 777
100 Ga0436364_0907474 3300037853 Bacteria 2886
101 Ga0436364_0976751 3300037853 Bacteria 1321
102 Ga0436364_1271335 3300037853 Bacteria 3357
103 Ga0436364_1284080 3300037853 Bacteria 14391
104 Ga0436364_1444897 3300037853 Bacteria 1249
105 Ga0436364_1448390 3300037853 Bacteria 770
106 Ga0436364_1491020 3300037853 Unclassified 1007
107 Ga0395901_0004371 3300038443 Bacteria 14254
108 Ga0436365_0794237 3300039437 Bacteria 1047
109 Ga0436365_0898977 3300039437 Bacteria 71829
110 Ga0436365_1740278 3300039437 Unclassified 654
111 Ga0436365_1771699 3300039437 Bacteria 1947
112 Ga0436360_0070513 3300039438 Bacteria 1728
113 Ga0436360_0100312 3300039438 Bacteria 1275
114 Ga0436360_0232014 3300039438 Bacteria 533
115 Ga0436360_0477787 3300039438 Unclassified 882
116 Ga0436360_0505627 3300039438 Bacteria 1882
117 Ga0436360_0631787 3300039438 Bacteria 1527
118 Ga0436360_0833773 3300039438 Bacteria 1095
119 Ga0436360_0906613 3300039438 Bacteria 1156
120 Ga0436360_0924917 3300039438 Bacteria 1008
121 Ga0436360_1007913 3300039438 Bacteria 1821
122 Ga0436360_1087017 3300039438 Bacteria 2227
123 Ga0436360_1143153 3300039438 Bacteria 1231
124 Ga0436361_0028049 3300039447 Bacteria 1103
125 Ga0436361_0194695 3300039447 Bacteria 62210
126 Ga0436361_0258166 3300039447 Bacteria 1007
127 Ga0436361_0309679 3300039447 Bacteria 2591
128 Ga0436361_0421758 3300039447 Bacteria 1566
129 Ga0436361_0653932 3300039447 Bacteria 1301
130 Ga0436361_0661927 3300039447 Bacteria 15656
131 Ga0436361_1088646 3300039447 Bacteria 2619
132 Ga0436361_1184361 3300039447 Bacteria 786
133 Ga0436363_0442501 3300039450 Unclassified 900
134 Ga0436363_0532134 3300039450 Bacteria 654
135 Ga0436363_0585081 3300039450 Bacteria 3207
136 Ga0436363_0688513 3300039450 Bacteria 1989
137 Ga0436363_0974362 3300039450 Bacteria 540
138 Ga0436363_1028589 3300039450 Bacteria 2645
139 Ga0436363_1073403 3300039450 Bacteria 18385
140 Ga0436363_1270860 3300039450 Unclassified 675
141 Ga0436363_1472761 3300039450 Unclassified 517
142 Ga0436363_1527906 3300039450 Bacteria 1111
143 Ga0436362_0085117 3300039453 Eukaryota 918
144 Ga0436362_0275175 3300039453 Bacteria 1423
145 Ga0436362_0287515 3300039453 Bacteria 4612
146 Ga0436362_0481445 3300039453 Bacteria 1292
147 Ga0436362_0505422 3300039453 Bacteria 1157
148 Ga0436362_0531196 3300039453 Bacteria 5726
149 Ga0436362_0592393 3300039453 Bacteria 2029
150 Ga0436362_0645260 3300039453 Unclassified 509
151 Ga0436362_0702161 3300039453 Bacteria 12636
152 Ga0436362_0753210 3300039453 Unclassified 1475
153 Ga0436362_0842742 3300039453 Unclassified 525
154 Ga0436362_0861328 3300039453 Bacteria 3953
155 Ga0436362_1204779 3300039453 Unclassified 844
156 Ga0436362_1206769 3300039453 Bacteria 2374
157 Ga0436362_1270323 3300039453 Unclassified 855
158 Ga0436362_1280297 3300039453 Unclassified 563
159 Ga0466966_0020385 3300044684 Bacteria 4360
160 Ga0466966_0784733 3300044684 Unclassified 574
161 Ga0466963_0027754 3300044694 Bacteria 3628
162 Ga0466957_0056881 3300044842 Bacteria 2392
163 Ga0466959_0143937 3300045049 Bacteria 1683
164 Ga0466959_0219302 3300045049 Bacteria 1320
165 Ga0466958_0304758 3300045836 Unclassified 1023
166 Ga0466958_0617947 3300045836 Unclassified 705
167 Ga0466958_0683414 3300045836 Bacteria 668
168 Ga0466967_0138965 3300045976 Bacteria 2261
169 Ga0466967_0823554 3300045976 Bacteria 922
170 Ga0213875_10123616
171 Ga0070683_100159749
172 Ga0070682_100550803
173 Ga0070691_10002222
174 Ga0070661_100760747
175 Ga0070714_100000120
176 Ga0070714_100328328
177 Ga0070714_100937729
178 Ga0070713_100732903
179 Ga0070713_101581132
180 Ga0070710_10258412
181 Ga0070663_100013204
182 Ga0070679_100182453
183 Ga0068853_100057232
184 Ga0068854_100000002
185 Ga0070717_10343756
186 Ga0070712_100399370
187 Ga0105240_10113575
188 Ga0105240_10159387
189 Ga0157374_10407505
190 Ga0157372_11606262
191 Ga0206356_10600788
192 Ga0213873_10004476
193 Ga0213873_10004903
194 Ga0213873_10076628
195 Ga0213872_10014183
196 Ga0213872_10032585
197 Ga0213872_10039831
198 Ga0213872_10115557
199 Ga0213872_10229695
200 Ga0213872_10293870
201 Ga0213872_10344564
202 Ga0213874_10000165
203 Ga0213874_10031693
204 Ga0213876_10002655
205 Ga0213876_10003401
206 Ga0213876_10678230
207 Ga0213875_10000001
208 Ga0213875_10008831
209 Ga0213875_10021621
210 Ga0213875_10119960
211 Ga0213875_10137405
212 Ga0213875_10317098
213 Ga0213875_10355206
214 Ga0213871_10018553
215 Ga0213871_10025934
216 Ga0213871_10134660
217 Ga0207692_10292191
218 Ga0207707_11225592
219 Ga0207695_10087172
220 Ga0207695_10510921
221 Ga0207652_10099172
222 Ga0207664_10005445
223 Ga0207664_10073394
224 Ga0207664_10154542
225 Ga0207664_10165718
226 Ga0207664_10359523
227 Ga0207661_10028470
228 Ga0207667_10003255
229 Ga0207667_10024937
230 Ga0207640_10000006
231 Ga0207639_10010570
232 Ga0207678_10077955
233 Ga0207702_10429473
234 Ga0265356_1000005
235 Ga0265357_1010644
236 Ga0265338_10000238
237 Ga0265338_10038232
238 Ga0265762_1027213
239 Ga0265763_1009549
240 Ga0265770_1005762
241 Ga0265760_10076865
242 Ga0265330_10205853
243 Ga0265332_10016338
244 Ga0265325_10000113
245 Ga0265325_10001349
246 Ga0265325_10005436
247 Ga0265340_10009359
248 Ga0265339_10019678
249 Ga0265339_10501892
250 Ga0265331_10085823
251 Ga0265327_10069285
252 Ga0265316_10012247
253 Ga0265316_10089830
254 Ga0265313_10000304
255 Ga0265342_10002456
256 Ga0265342_10006960
257 Ga0265342_10204272
258 Ga0373937_0888024
259 Ga0395900_0112984
260 Ga0395900_1929359
261 Ga0395898_0007642
262 Ga0436364_0027435
263 Ga0436364_0133586
264 Ga0436364_0273345
265 Ga0436364_0555552
266 Ga0436364_0661057
267 Ga0436364_0872102
268 Ga0436364_0884697
269 Ga0436364_0907474
270 Ga0436364_0976751
271 Ga0436364_1271335
272 Ga0436364_1284080
273 Ga0436364_1444897
274 Ga0436364_1448390
275 Ga0436364_1491020
276 Ga0395901_0004371
277 Ga0436365_0794237
278 Ga0436365_0898977
279 Ga0436365_1740278
280 Ga0436365_1771699
281 Ga0436360_0070513
282 Ga0436360_0100312
283 Ga0436360_0232014
284 Ga0436360_0477787
285 Ga0436360_0505627
286 Ga0436360_0631787
287 Ga0436360_0833773
288 Ga0436360_0906613
289 Ga0436360_0924917
290 Ga0436360_1007913
291 Ga0436360_1087017
292 Ga0436360_1143153
293 Ga0436361_0028049
294 Ga0436361_0194695
295 Ga0436361_0258166
296 Ga0436361_0309679
297 Ga0436361_0421758
298 Ga0436361_0653932
299 Ga0436361_0661927
300 Ga0436361_1088646
301 Ga0436361_1184361
302 Ga0436363_0442501
303 Ga0436363_0532134
304 Ga0436363_0585081
305 Ga0436363_0688513
306 Ga0436363_0974362
307 Ga0436363_1028589
308 Ga0436363_1073403
309 Ga0436363_1270860
310 Ga0436363_1472761
311 Ga0436363_1527906
312 Ga0436362_0085117
313 Ga0436362_0275175
314 Ga0436362_0287515
315 Ga0436362_0481445
316 Ga0436362_0505422
317 Ga0436362_0531196
318 Ga0436362_0592393
319 Ga0436362_0645260
320 Ga0436362_0702161
321 Ga0436362_0753210
322 Ga0436362_0842742
323 Ga0436362_0861328
324 Ga0436362_1204779
325 Ga0436362_1206769
326 Ga0436362_1270323
327 Ga0436362_1280297
328 Ga0466966_0020385
329 Ga0466966_0784733
330 Ga0466963_0027754
331 Ga0466957_0056881
332 Ga0466959_0143937
333 Ga0466959_0219302
334 Ga0466958_0304758
335 Ga0466958_0617947
336 Ga0466958_0683414
337 Ga0466967_0138965
338 Ga0466967_0823554

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02823

ATP-synt_DE_N

ATP synthase, Delta/Epsilon chain, beta-sandwich domain

11

93

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5dn6-assembly1.cif.gz_I atp synthase from paracoccus denitrificans 0.9292 10 85
5dn6-assembly1.cif.gz_I atp synthase from paracoccus denitrificans 0.8943 10 85
6foc-assembly1.cif.gz_H f1-atpase from mycobacterium smegmatis 0.8717 5 120
1h8e-assembly1.cif.gz_H (adp.alf4)2(adp.so4) bovine f1-atpase (all three catalytic sites occupied) 0.8692 5 93
4asu-assembly1.cif.gz_H f1-atpase in which all three catalytic sites contain bound nucleotide, with magnesium ion released in the empty site 0.8603 7 88
ID Description Score Start End Superfamily
af_P00835_1_88_2.60.15.10 Mainly Beta;Sandwich;ATP Synthase; domain 1;F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.9408 4 93 2.60.15.10
5dn6I00 Mainly Beta;Sandwich;ATP Synthase; domain 1;F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.9292 10 85 2.60.15.10
af_Q2FWF1_1_89_2.60.15.10 Mainly Beta;Sandwich;ATP Synthase; domain 1;F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.9228 3 88 2.60.15.10
af_P00835_1_88_2.60.15.10 Mainly Beta;Sandwich;ATP Synthase; domain 1;F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.9204 4 93 2.60.15.10
1aqtA01 Mainly Beta;Sandwich;ATP Synthase; domain 1;F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.919 4 93 2.60.15.10
ID Description Score Start End GO Terms
AF-A0A517Z993-F1-model_v4 ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit) 0.9753 4 88 GO:0005524
GO:0005886
GO:0012505
GO:0045261
GO:0046933
AF-A0A7V2Z3A7-F1-model_v4 ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit) 0.9706 1 87 GO:0005524
GO:0005886
GO:0012505
GO:0045261
GO:0046933
AF-A0A7Y3KG80-F1-model_v4 deleted 0.9676 4 120
AF-A0A368D8L1-F1-model_v4 F0F1 ATP synthase subunit epsilon 0.9664 1 88 GO:0012505
GO:0045261
GO:0046933
AF-A0A7X4IZG8-F1-model_v4 ATP synthase F1 subunit epsilon 0.9656 1 88 GO:0012505
GO:0045261
GO:0046933

Map