F254571

General Info

Members Datasets Scaffolds Average Seq Length
169 118 338 245

Family's Representative Sequence

Representative Sequence 3300007076|Ga0075435_100071866|Ga0075435_1000718663
Length 262
Sequence MIELGVNIDHVATIRQARRTYEPDPVWAAIEAHLGGADGITVHLREDRRHIQDDDVRRLVELVHVKLNLEMAATDEMVRLACDIKPQLVMLVPEGRQEITTEGGLDVHGQRKRLKTVVSRLQESGLMVSAFIDADEQQIAAAAECGFSVCEIHTGPYAHAFFSGGRDAQSPAVKTELEKIRSAGQQIQAVGMRFNAGHALNYVNVQPVASLPNVRELHIGHAIISRSVFVGIREAVAEMKRLMREAASAAHTHEATLRTQNS

Samples

Sample ID Description Type Environment
1 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
46 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
48 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
70 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
71 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
72 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
73 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
76 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
77 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
78 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
79 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
80 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
81 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
82 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
83 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
84 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
85 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
86 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
87 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
101 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
102 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
103 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
104 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
105 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
106 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
107 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
108 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
109 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
110 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
111 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
112 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
113 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
114 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
115 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
116 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
117 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
118 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.41
Metatranscriptomes 0.59
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.59
Rhizosphere 97.63
Stem 0
Stem Tuber 0
Unclassified 1.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075435_100071866 3300007076 Bacteria 2826
2 MRS1b_contig_5414624 2162886011 Bacteria 1658
3 Ga0058692_1000001 3300003856 Bacteria 834230
4 Ga0065707_10126227 3300005295 Bacteria 2007
5 Ga0070680_100004625 3300005336 Bacteria 10343
6 Ga0070680_100006635 3300005336 Bacteria 8803
7 Ga0070660_100027439 3300005339 Bacteria 4249
8 Ga0070661_100047872 3300005344 Bacteria 3129
9 Ga0070661_100365832 3300005344 Bacteria 1134
10 Ga0070671_100291074 3300005355 Bacteria 1390
11 Ga0070667_100046862 3300005367 Bacteria 3637
12 Ga0070714_100179413 3300005435 Bacteria 1926
13 Ga0070714_100216030 3300005435 Bacteria 1760
14 Ga0070714_100420547 3300005435 Bacteria 1266
15 Ga0070710_10076369 3300005437 Bacteria 1944
16 Ga0070678_100293237 3300005456 Bacteria 1380
17 Ga0070681_10000632 3300005458 Bacteria 28928
18 Ga0070681_10004635 3300005458 Bacteria 13126
19 Ga0070681_10090284 3300005458 Bacteria 3014
20 Ga0070685_10439673 3300005466 Bacteria 911
21 Ga0070679_100003192 3300005530 Bacteria 14978
22 Ga0070679_100088414 3300005530 Bacteria 3085
23 Ga0070665_100018608 3300005548 Bacteria 6962
24 Ga0070665_100269324 3300005548 Bacteria 1705
25 Ga0068855_100001761 3300005563 Bacteria 27049
26 Ga0068855_100192765 3300005563 Bacteria 2298
27 Ga0068855_100255543 3300005563 Bacteria 1953
28 Ga0068856_100165955 3300005614 Bacteria 2219
29 Ga0068856_100517152 3300005614 Bacteria 1215
30 Ga0068852_100219081 3300005616 Bacteria 1809
31 Ga0068859_100065894 3300005617 Bacteria 3656
32 Ga0068864_100516316 3300005618 Bacteria 1151
33 Ga0068863_100154685 3300005841 Bacteria 2195
34 Ga0068858_100096290 3300005842 Bacteria 2758
35 Ga0068860_100190959 3300005843 Bacteria 1982
36 Ga0081455_10100098 3300005937 Bacteria 2329
37 Ga0075428_100005307 3300006844 Bacteria 14323
38 Ga0075428_100603164 3300006844 Bacteria 1172
39 Ga0075430_100034068 3300006846 Bacteria 4321
40 Ga0075430_100110122 3300006846 Bacteria 2296
41 Ga0075431_100032415 3300006847 Bacteria 5384
42 Ga0075431_100166661 3300006847 Bacteria 2264
43 Ga0075431_100718077 3300006847 Bacteria 976
44 Ga0075433_10344051 3300006852 Bacteria 1318
45 Ga0075429_100270338 3300006880 Unclassified 1489
46 Ga0097620_100065892 3300006931 Bacteria 3656
47 Ga0105240_10009013 3300009093 Bacteria 14172
48 Ga0105240_10015285 3300009093 Bacteria 10446
49 Ga0105240_10148835 3300009093 Bacteria 2790
50 Ga0105240_10230764 3300009093 Bacteria 2151
51 Ga0111539_10244055 3300009094 Bacteria 2091
52 Ga0105245_10065971 3300009098 Bacteria 3275
53 Ga0114129_10422894 3300009147 Bacteria 1752
54 Ga0114129_10789608 3300009147 Bacteria 1212
55 Ga0105248_10201113 3300009177 Bacteria 2245
56 Ga0105248_10437617 3300009177 Bacteria 1473
57 Ga0105237_10071243 3300009545 Bacteria 3471
58 Ga0105237_10109170 3300009545 Bacteria 2758
59 Ga0105238_10011695 3300009551 Bacteria 8847
60 Ga0105238_10158384 3300009551 Bacteria 2240
61 Ga0157370_10010287 3300013104 Bacteria 9869
62 Ga0157370_10074513 3300013104 Bacteria 3201
63 Ga0157370_10132648 3300013104 Bacteria 2323
64 Ga0157370_10261759 3300013104 Bacteria 1598
65 Ga0157370_10496215 3300013104 Bacteria 1121
66 Ga0157369_10031750 3300013105 Bacteria 5811
67 Ga0157369_10146713 3300013105 Bacteria 2495
68 Ga0157369_10416932 3300013105 Bacteria 1392
69 Ga0157374_10224967 3300013296 Bacteria 1842
70 Ga0157374_10561575 3300013296 Bacteria 1149
71 Ga0157372_10068436 3300013307 Bacteria 3992
72 Ga0157372_10183997 3300013307 Bacteria 2419
73 Ga0163163_10369824 3300014325 Bacteria 1491
74 Ga0163163_11154980 3300014325 Bacteria 837
75 Ga0157380_10297915 3300014326 Bacteria 1484
76 Ga0157376_10839254 3300014969 Unclassified 934
77 Ga0206353_12011479 3300020082 Bacteria 1329
78 Ga0213876_10295331 3300021384 Bacteria 861
79 Ga0207713_1024230 3300025735 Bacteria 2835
80 Ga0207707_10000279 3300025912 Bacteria 54572
81 Ga0207695_10000410 3300025913 Bacteria 95284
82 Ga0207695_10016558 3300025913 Bacteria 8619
83 Ga0207695_10042067 3300025913 Bacteria 4885
84 Ga0207695_10119181 3300025913 Bacteria 2609
85 Ga0207671_10056329 3300025914 Bacteria 2912
86 Ga0207671_10177437 3300025914 Bacteria 1657
87 Ga0207660_10136431 3300025917 Bacteria 1872
88 Ga0207660_10323442 3300025917 Bacteria 1232
89 Ga0207662_10432683 3300025918 Bacteria 897
90 Ga0207657_10038858 3300025919 Bacteria 4232
91 Ga0207652_10000331 3300025921 Bacteria 49024
92 Ga0207652_10110640 3300025921 Bacteria 2436
93 Ga0207652_10181375 3300025921 Bacteria 1892
94 Ga0207650_10256607 3300025925 Bacteria 1417
95 Ga0207659_10387324 3300025926 Bacteria 1167
96 Ga0207664_10208328 3300025929 Bacteria 1690
97 Ga0207664_10233077 3300025929 Bacteria 1601
98 Ga0207670_10193655 3300025936 Bacteria 1540
99 Ga0207667_10686414 3300025949 Bacteria 1027
100 Ga0207658_10033806 3300025986 Bacteria 3649
101 Ga0207702_10072515 3300026078 Bacteria 2968
102 Ga0207702_10095234 3300026078 Bacteria 2615
103 Ga0207641_10213612 3300026088 Bacteria 1785
104 Ga0207641_11030090 3300026088 Bacteria 820
105 Ga0207676_10485290 3300026095 Bacteria 1171
106 Ga0207683_10483364 3300026121 Bacteria 1143
107 Ga0207698_10510999 3300026142 Bacteria 1171
108 Ga0268266_10099332 3300028379 Bacteria 2562
109 Ga0268264_10135068 3300028381 Bacteria 2192
110 Ga0265338_10015656 3300028800 Bacteria 8310
111 Ga0265338_10470566 3300028800 Bacteria 888
112 Ga0307408_100113161 3300031548 Bacteria 2089
113 Ga0307408_100400091 3300031548 Bacteria 1179
114 Ga0265314_10007633 3300031711 Bacteria 9363
115 Ga0307406_10144888 3300031901 Bacteria 1687
116 Ga0307416_100179388 3300032002 Bacteria 1983
117 Ga0373937_0374349 3300036401 Bacteria 1350
118 Ga0436365_1488590 3300039437 Bacteria 1496
119 Ga0495592_0045446 3300046454 Bacteria 3277
120 Ga0495618_0182421 3300046514 Bacteria 1333
121 Ga0495630_0073649 3300046517 Bacteria 2572
122 Ga0495630_0332490 3300046517 Bacteria 1162
123 Ga0495652_0276352 3300046529 Bacteria 1232
124 Ga0495667_0006487 3300046559 Bacteria 7944
125 Ga0495667_0052643 3300046559 Bacteria 2681
126 Ga0495656_0332542 3300046615 Bacteria 784
127 Ga0495634_0208822 3300046642 Bacteria 1210
128 Ga0495680_0128973 3300047322 Bacteria 1860
129 Ga0495684_0066092 3300047471 Bacteria 2749
130 Ga0496104_0064052 3300048907 Bacteria 3488
131 Ga0496126_0342742 3300048929 Bacteria 1224
132 Ga0501031_0020158 3300049568 Bacteria 4346
133 Ga0501031_0177869 3300049568 Bacteria 1390
134 Ga0501033_0003706 3300049570 Bacteria 12433
135 Ga0501034_0045407 3300049571 Bacteria 4439
136 Ga0501034_0059777 3300049571 Bacteria 3828
137 Ga0501036_0000381 3300049572 Bacteria 31374
138 Ga0501038_0006387 3300049574 Bacteria 10916
139 Ga0501039_0000492 3300049575 Bacteria 28646
140 Ga0501040_0000262 3300049576 Bacteria 30759
141 Ga0501040_0000283 3300049576 Bacteria 29621
142 Ga0501041_0001364 3300049577 Bacteria 13461
143 Ga0501042_0000621 3300049578 Bacteria 18906
144 Ga0501042_0006295 3300049578 Bacteria 7700
145 Ga0501042_0050016 3300049578 Bacteria 2981
146 Ga0501043_0018689 3300049579 Bacteria 5440
147 Ga0501046_0000630 3300049580 Bacteria 34607
148 Ga0501047_0060758 3300049581 Bacteria 3646
149 Ga0501048_0006627 3300049582 Bacteria 8800
150 Ga0501070_0128482 3300049586 Bacteria 2094
151 Ga0501071_0002087 3300049587 Bacteria 11993
152 Ga0501072_0001764 3300049588 Bacteria 16084
153 Ga0501073_0195101 3300049589 Bacteria 1401
154 Ga0501074_0006889 3300049590 Bacteria 8205
155 Ga0501075_0006060 3300049591 Bacteria 8295
156 Ga0501076_0008124 3300049592 Bacteria 7675
157 Ga0501077_0002163 3300049593 Bacteria 11874
158 Ga0501079_0003004 3300049741 Bacteria 12333
159 Ga0501080_0008641 3300049742 Bacteria 9245
160 Ga0501081_0002319 3300049743 Bacteria 11982
161 Ga0501045_0000167 3300049824 Bacteria 35865
162 nmdc:mga09592_258115_c1 3300050508 Unclassified 1511
163 nmdc:mga0qj67_124460_c1 3300050509 Bacteria 2086
164 nmdc:mga06r32_59119_c1 3300050510 Bacteria 3685
165 nmdc:mga06r32_673500_c1 3300050510 Bacteria 1001
166 nmdc:mga0rr50_61116_c1 3300050513 Bacteria 2837
167 Ga0501084_0001772 3300054114 Bacteria 17179
168 Ga0501082_0017358 3300060353 Bacteria 6200
169 Ga0530510_0000026 3300061734 Bacteria 67071
170 Ga0075435_100071866
171 MRS1b_contig_5414624
172 Ga0058692_1000001
173 Ga0065707_10126227
174 Ga0070680_100004625
175 Ga0070680_100006635
176 Ga0070660_100027439
177 Ga0070661_100047872
178 Ga0070661_100365832
179 Ga0070671_100291074
180 Ga0070667_100046862
181 Ga0070714_100179413
182 Ga0070714_100216030
183 Ga0070714_100420547
184 Ga0070710_10076369
185 Ga0070678_100293237
186 Ga0070681_10000632
187 Ga0070681_10004635
188 Ga0070681_10090284
189 Ga0070685_10439673
190 Ga0070679_100003192
191 Ga0070679_100088414
192 Ga0070665_100018608
193 Ga0070665_100269324
194 Ga0068855_100001761
195 Ga0068855_100192765
196 Ga0068855_100255543
197 Ga0068856_100165955
198 Ga0068856_100517152
199 Ga0068852_100219081
200 Ga0068859_100065894
201 Ga0068864_100516316
202 Ga0068863_100154685
203 Ga0068858_100096290
204 Ga0068860_100190959
205 Ga0081455_10100098
206 Ga0075428_100005307
207 Ga0075428_100603164
208 Ga0075430_100034068
209 Ga0075430_100110122
210 Ga0075431_100032415
211 Ga0075431_100166661
212 Ga0075431_100718077
213 Ga0075433_10344051
214 Ga0075429_100270338
215 Ga0097620_100065892
216 Ga0105240_10009013
217 Ga0105240_10015285
218 Ga0105240_10148835
219 Ga0105240_10230764
220 Ga0111539_10244055
221 Ga0105245_10065971
222 Ga0114129_10422894
223 Ga0114129_10789608
224 Ga0105248_10201113
225 Ga0105248_10437617
226 Ga0105237_10071243
227 Ga0105237_10109170
228 Ga0105238_10011695
229 Ga0105238_10158384
230 Ga0157370_10010287
231 Ga0157370_10074513
232 Ga0157370_10132648
233 Ga0157370_10261759
234 Ga0157370_10496215
235 Ga0157369_10031750
236 Ga0157369_10146713
237 Ga0157369_10416932
238 Ga0157374_10224967
239 Ga0157374_10561575
240 Ga0157372_10068436
241 Ga0157372_10183997
242 Ga0163163_10369824
243 Ga0163163_11154980
244 Ga0157380_10297915
245 Ga0157376_10839254
246 Ga0206353_12011479
247 Ga0213876_10295331
248 Ga0207713_1024230
249 Ga0207707_10000279
250 Ga0207695_10000410
251 Ga0207695_10016558
252 Ga0207695_10042067
253 Ga0207695_10119181
254 Ga0207671_10056329
255 Ga0207671_10177437
256 Ga0207660_10136431
257 Ga0207660_10323442
258 Ga0207662_10432683
259 Ga0207657_10038858
260 Ga0207652_10000331
261 Ga0207652_10110640
262 Ga0207652_10181375
263 Ga0207650_10256607
264 Ga0207659_10387324
265 Ga0207664_10208328
266 Ga0207664_10233077
267 Ga0207670_10193655
268 Ga0207667_10686414
269 Ga0207658_10033806
270 Ga0207702_10072515
271 Ga0207702_10095234
272 Ga0207641_10213612
273 Ga0207641_11030090
274 Ga0207676_10485290
275 Ga0207683_10483364
276 Ga0207698_10510999
277 Ga0268266_10099332
278 Ga0268264_10135068
279 Ga0265338_10015656
280 Ga0265338_10470566
281 Ga0307408_100113161
282 Ga0307408_100400091
283 Ga0265314_10007633
284 Ga0307406_10144888
285 Ga0307416_100179388
286 Ga0373937_0374349
287 Ga0436365_1488590
288 Ga0495592_0045446
289 Ga0495618_0182421
290 Ga0495630_0073649
291 Ga0495630_0332490
292 Ga0495652_0276352
293 Ga0495667_0006487
294 Ga0495667_0052643
295 Ga0495656_0332542
296 Ga0495634_0208822
297 Ga0495680_0128973
298 Ga0495684_0066092
299 Ga0496104_0064052
300 Ga0496126_0342742
301 Ga0501031_0020158
302 Ga0501031_0177869
303 Ga0501033_0003706
304 Ga0501034_0045407
305 Ga0501034_0059777
306 Ga0501036_0000381
307 Ga0501038_0006387
308 Ga0501039_0000492
309 Ga0501040_0000262
310 Ga0501040_0000283
311 Ga0501041_0001364
312 Ga0501042_0000621
313 Ga0501042_0006295
314 Ga0501042_0050016
315 Ga0501043_0018689
316 Ga0501046_0000630
317 Ga0501047_0060758
318 Ga0501048_0006627
319 Ga0501070_0128482
320 Ga0501071_0002087
321 Ga0501072_0001764
322 Ga0501073_0195101
323 Ga0501074_0006889
324 Ga0501075_0006060
325 Ga0501076_0008124
326 Ga0501077_0002163
327 Ga0501079_0003004
328 Ga0501080_0008641
329 Ga0501081_0002319
330 Ga0501045_0000167
331 nmdc:mga09592_258115_c1
332 nmdc:mga0qj67_124460_c1
333 nmdc:mga06r32_59119_c1
334 nmdc:mga06r32_673500_c1
335 nmdc:mga0rr50_61116_c1
336 Ga0501084_0001772
337 Ga0501082_0017358
338 Ga0530510_0000026

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03740

PdxJ

Pyridoxal phosphate biosynthesis protein PdxJ

3

243

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ixo-assembly3.cif.gz_A-2 enzyme-analogue substrate complex of pyridoxine 5'-phosphate synthase 0.9663 2 234
3f4n-assembly5.cif.gz_B crystal structure of pyridoxal phosphate biosynthetic protein pdxj from yersinia pestis 0.9603 1 234
3gk0-assembly1.cif.gz_A crystal structure of pyridoxal phosphate biosynthetic protein from burkholderia pseudomallei 0.9553 2 234
5dlc-assembly2.cif.gz_D x-ray crystal structure of a pyridoxine 5-prime-phosphate synthase from pseudomonas aeruginosa 0.9522 2 234
3f4n-assembly2.cif.gz_C crystal structure of pyridoxal phosphate biosynthetic protein pdxj from yersinia pestis 0.9511 1 234
ID Description Score Start End Superfamily
3gk0A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9553 2 234 3.20.20.70
3gk0A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9434 2 234 3.20.20.70
af_Q9CA57_91_229_1.20.1050.10 Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2; 0.9425 154 182 1.20.1050.10
3o6cA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9033 1 235 3.20.20.70
3o6cA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8996 1 235 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A7Y2VKQ7-F1-model_v4 Pyridoxine 5'-phosphate synthase 0.9976 123 234 GO:0005829
GO:0008615
GO:0033856
AF-A0A142YL29-F1-model_v4 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.997 114 234 GO:0005829
GO:0008615
GO:0033856
AF-A0A3B9DKA1-F1-model_v4 deleted 0.9957 139 234
AF-A0A838WB23-F1-model_v4 Pyridoxine 5'-phosphate synthase 0.9937 141 234 GO:0005829
GO:0008615
GO:0033856
AF-A0A258SLS5-F1-model_v4 Pyridoxine 5'-phosphate synthase 0.9935 126 234 GO:0005829
GO:0008615
GO:0033856

Map