F253893

General Info

Members Datasets Scaffolds Average Seq Length
169 131 83 341

Family's Representative Sequence

Representative Sequence 3300003758|Ga0055532_1001976|Ga0055532_10019765
Length 360
Sequence MKSTGENRDENVEGALLIQNVAVIGAGSWGTALASVLAKNGHQVTLWVRDARLADEVNQTHRNQKYLPEAILPANIVATASLEEAVSGVPVVLLAVPSHAMRQVCKSMAAYLDPEVWLLHATKGFELESLKRMSEVITEELPPEIASRLAVLTGPSHAEEVVCEQPTTVVVASESEESLLRAQDLLMNQNFRVYTNPDLVGAEIAGALKNIIALGAGMSDGLGYGDNAKAALLTRGLAEISRLGIKLGAMPLTFSGLAGVGDLIVTCTSKHSRNWRAGYMLGQGKKLEEVLEQMGMVVEGVRTTHAAYALAEREQVEMPITQVLYGILFEGKTARQGVEELMGRGKTFEMSYLNPDADRS

Samples

Sample ID Description Type Environment
1 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
2 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
3 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
4 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
5 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
6 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
7 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
8 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
9 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
10 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
11 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
12 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
13 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
14 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
15 2671180694 Paenibacillus sp. A3 Isolate Unclassified
16 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
17 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
18 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
19 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
20 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
21 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
22 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
23 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
24 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
25 2818991459 Paenibacillus sp. 597 Isolate Unclassified
26 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
27 2831905167 Ammoniphilus oxalaticus RAOx-1 Isolate Rhizosphere
28 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
29 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
30 2857472729 Cohnella sp. R-74144 Isolate Unclassified
31 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
32 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
33 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
34 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
35 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
36 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
37 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
38 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
39 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
40 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
41 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
42 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
43 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
44 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
45 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
46 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
47 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
48 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
49 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
50 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
51 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
52 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
53 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
54 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
55 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
56 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
57 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
58 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
59 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
60 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
61 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
62 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
63 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
64 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
65 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
66 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
67 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
68 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
69 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
70 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
71 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
72 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
73 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
74 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
75 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
76 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
77 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
78 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
79 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
80 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
81 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
82 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
83 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
84 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
85 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
89 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
92 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
94 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
97 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
98 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
99 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
102 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
105 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
109 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
110 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
111 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
112 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
113 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
114 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
115 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
116 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
117 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
118 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
119 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
120 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
121 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
122 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
123 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
124 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
125 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
126 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
127 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
128 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
129 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
130 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
131 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 48.52
Metatranscriptomes 0.59
Isolates 50.89

Biome Distribution

Category Percentage (%)
Aerial Root 1.18
Bulb 0
Endosphere 7.69
Nodule 1.18
Rhizoplane 0.59
Rhizosphere 48.52
Stem 0
Stem Tuber 0
Unclassified 40.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1001232 3300003578 Bacteria 5255
2 Ga0055538_1000103 3300003751 Bacteria 67925
3 Ga0055532_1001976 3300003758 Bacteria 4791
4 Ga0055535_1002274 3300003761 Bacteria 7113
5 Ga0055541_1000137 3300003841 Bacteria 40035
6 Ga0105244_10007150 3300009036 Bacteria 7132
7 Ga0105244_10009248 3300009036 Bacteria 6075
8 Ga0209784_100046 3300025224 Bacteria 200009
9 Ga0209566_100015 3300025225 Bacteria 457963
10 Ga0209147_100042 3300025229 Bacteria 301263
11 Ga0209437_100901 3300025233 Bacteria 11844
12 Ga0209258_101631 3300025242 Bacteria 7264
13 Ga0209675_1005510 3300025291 Bacteria 5284
14 Ga0209025_1015956 3300025294 Bacteria 4477
15 Ga0209025_1034817 3300025294 Bacteria 2289
16 Ga0209025_1041322 3300025294 Bacteria 1977
17 Ga0207655_1011122 3300025728 Bacteria 5389
18 Ga0265323_10007074 3300028653 Bacteria 4686
19 Ga0373931_0023840 3300035691 Bacteria 3092
20 Ga0395899_0046969 3300037312 Bacteria 3215
21 Ga0395899_0098168 3300037312 Bacteria 2116
22 Ga0400487_20885 3300039110 Bacteria 5720
23 Ga0439439_0001332 3300041406 Bacteria 4857
24 Ga0439433_0001255 3300041999 Bacteria 5235
25 Ga0439449_0005353 3300042007 Bacteria 4917
26 Ga0451577_0000151 3300042876 Bacteria 153747
27 Ga0451577_0003731 3300042876 Bacteria 16625
28 Ga0451577_0020720 3300042876 Bacteria 6029
29 Ga0451577_0156072 3300042876 Bacteria 2054
30 Ga0451577_0182277 3300042876 Bacteria 1893
31 Ga0466969_0001178 3300044656 Bacteria 14106
32 Ga0453683_0000007 3300044673 Bacteria 581341
33 Ga0453683_0000250 3300044673 Bacteria 71009
34 Ga0453683_0018992 3300044673 Bacteria 4409
35 Ga0466966_0126153 3300044684 Bacteria 1569
36 Ga0453684_0000424 3300044712 Bacteria 172336
37 Ga0453684_0003180 3300044712 Bacteria 37671
38 Ga0453684_0017366 3300044712 Bacteria 11151
39 Ga0453684_0333952 3300044712 Bacteria 1713
40 Ga0453684_0420581 3300044712 Unclassified 1493
41 Ga0466968_0021557 3300044735 Bacteria 2610
42 Ga0466959_0001665 3300045049 Bacteria 13763
43 Ga0451576_0142275 3300045051 Bacteria 2501
44 Ga0451576_0200883 3300045051 Bacteria 2082
45 Ga0495637_0090559 3300046520 Bacteria 1207
46 Ga0495661_0051463 3300046665 Bacteria 2487
47 Ga0495660_0011046 3300046810 Bacteria 5244
48 Ga0495681_0084694 3300047470 Bacteria 1409
49 Ga0496116_0007099 3300048919 Bacteria 10029
50 Ga0496116_0020155 3300048919 Bacteria 5073
51 Ga0496116_0024481 3300048919 Bacteria 4465
52 Ga0496116_0077989 3300048919 Bacteria 2068
53 Ga0496116_0092305 3300048919 Bacteria 1836
54 Ga0496116_0118489 3300048919 Bacteria 1538
55 Ga0496117_0003593 3300048920 Bacteria 17890
56 Ga0496118_0010034 3300048921 Bacteria 9440
57 Ga0496119_0000221 3300048922 Bacteria 79912
58 Ga0496119_0001841 3300048922 Bacteria 24521
59 Ga0496119_0080322 3300048922 Bacteria 1881
60 Ga0496120_0000045 3300048923 Bacteria 191663
61 Ga0496121_0048981 3300048924 Bacteria 3588
62 Ga0496121_0066289 3300048924 Bacteria 2932
63 Ga0496122_0003505 3300048925 Bacteria 20614
64 Ga0496122_0010135 3300048925 Bacteria 9769
65 Ga0496122_0016183 3300048925 Bacteria 7083
66 Ga0496122_0019182 3300048925 Bacteria 6262
67 Ga0496122_0031965 3300048925 Bacteria 4363
68 Ga0496122_0043311 3300048925 Bacteria 3528
69 Ga0496122_0111065 3300048925 Bacteria 1799
70 Ga0496122_0198909 3300048925 Bacteria 1174
71 Ga0496123_0005875 3300048926 Bacteria 12151
72 Ga0496123_0143454 3300048926 Bacteria 1301
73 Ga0496124_0000657 3300048927 Bacteria 57039
74 Ga0496124_0000694 3300048927 Bacteria 55198
75 Ga0496124_0091864 3300048927 Bacteria 2473
76 Ga0496124_0216265 3300048927 Bacteria 1445
77 Ga0496125_0002232 3300048928 Bacteria 25769
78 Ga0496125_0013715 3300048928 Bacteria 7949
79 Ga0496125_0014813 3300048928 Bacteria 7573
80 Ga0496126_0000608 3300048929 Bacteria 67879
81 Ga0496126_0004541 3300048929 Bacteria 16504
82 Ga0496126_0048620 3300048929 Bacteria 3874
83 Ga0501217_001073 3300049661 Bacteria 4964

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048927 Ga0496124_0000657 Ga0496124_0000657_32811_33851 303
2 3300048919 Ga0496116_0007099 Ga0496116_0007099_2591_3556 305
3 3300048922 Ga0496119_0000221 Ga0496119_0000221_19405_20370 305
4 3300048923 Ga0496120_0000045 Ga0496120_0000045_86142_87107 305
5 3300048925 Ga0496122_0016183 Ga0496122_0016183_2774_3739 305
6 3300048927 Ga0496124_0000694 Ga0496124_0000694_2748_3713 305
7 3300048929 Ga0496126_0000608 Ga0496126_0000608_65971_66936 305
8 3300042876 Ga0451577_0182277 Ga0451577_0182277_38_1012 307
9 3300044673 Ga0453683_0000007 Ga0453683_0000007_471378_472352 307
10 3300044712 Ga0453684_0003180 Ga0453684_0003180_35589_36563 307
11 3300042876 Ga0451577_0020720 Ga0451577_0020720_4970_5959 312
12 3300044712 Ga0453684_0333952 Ga0453684_0333952_616_1605 312
13 3300045051 Ga0451576_0142275 Ga0451576_0142275_396_1385 312
14 3300042876 Ga0451577_0003731 Ga0451577_0003731_6981_7982 314
15 3300003751 Ga0055538_1000103 Ga0055538_100010320 315
16 3300025224 Ga0209784_100046 Ga0209784_10004619 315
17 3300035691 Ga0373931_0023840 Ga0373931_0023840_702_1700 315
18 3300039110 Ga0400487_20885 Ga0400487_20885_835_1833 315
19 3300042876 Ga0451577_0156072 Ga0451577_0156072_802_1806 315
20 iso_pu_bacteria 2904113452 2904118277 316
21 3300049661 Ga0501217_001073 Ga0501217_001073_2342_3379 319
22 iso_pu_bacteria 8054795415 8054798223 319
23 3300041406 Ga0439439_0001332 Ga0439439_0001332_3754_4764 320
24 3300041999 Ga0439433_0001255 Ga0439433_0001255_2647_3657 320
25 3300042007 Ga0439449_0005353 Ga0439449_0005353_3549_4559 320
26 3300044712 Ga0453684_0017366 Ga0453684_0017366_3632_4645 320
27 iso_pu_bacteria 2865002811 2865003675 320
28 iso_pu_bacteria 2888578766 2888581155 320
29 iso_pu_bacteria 2889049205 2889050166 320
30 iso_pu_bacteria 2898907183 2898909831 320
31 iso_pu_bacteria 2916971899 2916974346 320
32 iso_pu_bacteria 2980182181 2980189728 320
33 iso_pu_bacteria 8056533031 8056536482 320
34 3300042876 Ga0451577_0000151 Ga0451577_0000151_107947_108963 321
35 3300044673 Ga0453683_0000250 Ga0453683_0000250_41170_42186 321
36 3300044673 Ga0453683_0018992 Ga0453683_0018992_450_1472 321
37 3300044712 Ga0453684_0000424 Ga0453684_0000424_48036_49052 321
38 3300045051 Ga0451576_0200883 Ga0451576_0200883_390_1412 321
39 3300046665 Ga0495661_0051463 Ga0495661_0051463_986_2020 321
40 3300048925 Ga0496122_0019182 Ga0496122_0019182_518_1558 321
41 3300048926 Ga0496123_0005875 Ga0496123_0005875_4957_5997 321
42 3300048928 Ga0496125_0002232 Ga0496125_0002232_6774_7814 321
43 iso_pu_bacteria 2512564013 2512635852 321
44 iso_pu_bacteria 2791355222 2793184502 321
45 iso_pu_bacteria 2857460504 2857461307 321
46 iso_pu_bacteria 2857465823 2857469914 321
47 iso_pu_bacteria 2857591370 2857591751 321
48 iso_pu_bacteria 2915597211 2915601081 321
49 iso_pu_bacteria 2929183550 2929186225 321
50 iso_pu_bacteria 8057473075 8057478297 321
51 3300037312 Ga0395899_0098168 Ga0395899_0098168_161_1195 322
52 3300044712 Ga0453684_0420581 Ga0453684_0420581_270_1289 322
53 iso_pu_bacteria 8057733483 8057739522 322
54 3300048925 Ga0496122_0003505 Ga0496122_0003505_18152_19183 323
55 iso_pu_bacteria 2510917027 2511179957 323
56 iso_pu_bacteria 2524023129 2524186228 323
57 iso_pu_bacteria 2744054657 2745167019 323
58 iso_pu_bacteria 2816332336 2817618238 323
59 iso_pu_bacteria 2831905167 2831905805 323
60 iso_pu_bacteria 2915606848 2915607332 323
61 iso_pu_bacteria 2816332295 2817480521 324
62 iso_pu_bacteria 3006858327 3006860868 324
63 iso_pu_bacteria 8054280661 8054281457 324
64 3300028653 Ga0265323_10007074 Ga0265323_100070746 325
65 iso_pu_bacteria 2929206907 2929208696 325
66 iso_pu_bacteria 8055632911 8055635633 325
67 3300048922 Ga0496119_0080322 Ga0496119_0080322_56_1096 326
68 iso_pu_bacteria 2563366752 2563928969 326
69 iso_pu_bacteria 2571042143 2571533521 326
70 iso_pu_bacteria 2576861424 2578337723 326
71 iso_pu_bacteria 2585428059 2587738701 326
72 iso_pu_bacteria 2600255286 2601638801 326
73 iso_pu_bacteria 2619619294 2621276062 326
74 iso_pu_bacteria 2643221543 2643738349 326
75 iso_pu_bacteria 2643221676 2644421723 326
76 iso_pu_bacteria 2721755693 2723604647 326
77 iso_pu_bacteria 2728368933 2728529225 326
78 iso_pu_bacteria 2728369359 2730135287 326
79 iso_pu_bacteria 2751185905 2753809906 326
80 iso_pu_bacteria 2802428803 2802436906 326
81 iso_pu_bacteria 2818991459 2819669241 326
82 iso_pu_bacteria 2821111986 2821114346 326
83 iso_pu_bacteria 2864733723 2864737405 326
84 iso_pu_bacteria 2881636855 2881636930 326
85 iso_pu_bacteria 2885526491 2885527801 326
86 iso_pu_bacteria 2889042446 2889046450 326
87 iso_pu_bacteria 2889276214 2889280554 326
88 iso_pu_bacteria 2904162308 2904163558 326
89 iso_pu_bacteria 2904490793 2904493353 326
90 iso_pu_bacteria 2904595352 2904595514 326
91 iso_pu_bacteria 2904755435 2904762060 326
92 iso_pu_bacteria 2907202186 2907205234 326
93 iso_pu_bacteria 2919160200 2919162645 326
94 iso_pu_bacteria 2919425241 2919431540 326
95 iso_pu_bacteria 2931384279 2931389899 326
96 iso_pu_bacteria 2938649242 2938651807 326
97 iso_pu_bacteria 2939679117 2939680713 326
98 iso_pu_bacteria 2939702853 2939705268 326
99 iso_pu_bacteria 2945991243 2945991410 326
100 iso_pu_bacteria 2946053406 2946054105 326
101 iso_pu_bacteria 2968558590 2968562863 326
102 iso_pu_bacteria 2971403814 2971407843 326
103 iso_pu_bacteria 2971511577 2971512324 326
104 iso_pu_bacteria 2980176882 2980177420 326
105 iso_pu_bacteria 2984527788 2984530074 326
106 iso_pu_bacteria 2984532647 2984536180 326
107 iso_pu_bacteria 2988225383 2988231994 326
108 iso_pu_bacteria 2996632988 2996638163 326
109 iso_pu_bacteria 2996706504 2996707359 326
110 3300003758 Ga0055532_1001976 Ga0055532_10019765 327
111 3300003761 Ga0055535_1002274 Ga0055535_10022748 327
112 3300003841 Ga0055541_1000137 Ga0055541_100013724 327
113 3300025225 Ga0209566_100015 Ga0209566_100015194 327
114 3300025229 Ga0209147_100042 Ga0209147_100042225 327
115 3300025242 Ga0209258_101631 Ga0209258_1016317 327
116 3300025294 Ga0209025_1034817 Ga0209025_10348172 327
117 3300025294 Ga0209025_1041322 Ga0209025_10413221 327
118 3300037312 Ga0395899_0046969 Ga0395899_0046969_715_1749 327
119 3300046520 Ga0495637_0090559 Ga0495637_0090559_95_1135 327
120 3300046810 Ga0495660_0011046 Ga0495660_0011046_14_1054 327
121 3300047470 Ga0495681_0084694 Ga0495681_0084694_196_1236 327
122 iso_pu_bacteria 2512564039 2512732517 327
123 iso_pu_bacteria 2548877040 2550904664 327
124 iso_pu_bacteria 2857472729 2857473961 327
125 iso_pu_bacteria 2925326138 2925331711 327
126 iso_pu_bacteria 8054465665 8054469579 327
127 iso_pu_bacteria 2593339198 2595315568 328
128 iso_pu_bacteria 2671180694 2673823359 328
129 iso_pu_bacteria 2864997549 2865001920 328
130 iso_pu_bacteria 2889295896 2889297185 328
131 iso_pu_bacteria 2981284811 2981285663 328
132 iso_pu_bacteria 2981289755 2981290610 328
133 iso_pu_bacteria 2981980479 2981980767 328
134 iso_pu_bacteria 2981985349 2981985645 328
135 3300048919 Ga0496116_0118489 Ga0496116_0118489_298_1338 329
136 iso_pu_bacteria 2980125574 2980126885 329
137 3300003578 Ga0006562J51391_1001232 Ga0006562J51391_10012326 330
138 3300009036 Ga0105244_10007150 Ga0105244_100071506 330
139 3300009036 Ga0105244_10009248 Ga0105244_100092484 330
140 3300025233 Ga0209437_100901 Ga0209437_10090114 330
141 3300025291 Ga0209675_1005510 Ga0209675_10055103 330
142 3300025294 Ga0209025_1015956 Ga0209025_10159562 330
143 3300025728 Ga0207655_1011122 Ga0207655_10111224 330
144 3300044656 Ga0466969_0001178 Ga0466969_0001178_1210_2262 330
145 3300044684 Ga0466966_0126153 Ga0466966_0126153_405_1457 330
146 3300044735 Ga0466968_0021557 Ga0466968_0021557_544_1596 330
147 3300045049 Ga0466959_0001665 Ga0466959_0001665_10242_11294 330
148 3300048919 Ga0496116_0020155 Ga0496116_0020155_918_1958 330
149 3300048919 Ga0496116_0024481 Ga0496116_0024481_51_1103 330
150 3300048919 Ga0496116_0077989 Ga0496116_0077989_704_1753 330
151 3300048919 Ga0496116_0092305 Ga0496116_0092305_595_1671 330
152 3300048920 Ga0496117_0003593 Ga0496117_0003593_6703_7779 330
153 3300048921 Ga0496118_0010034 Ga0496118_0010034_450_1526 330
154 3300048922 Ga0496119_0001841 Ga0496119_0001841_4311_5387 330
155 3300048924 Ga0496121_0048981 Ga0496121_0048981_107_1183 330
156 3300048924 Ga0496121_0066289 Ga0496121_0066289_166_1242 330
157 3300048925 Ga0496122_0010135 Ga0496122_0010135_2134_3210 330
158 3300048925 Ga0496122_0031965 Ga0496122_0031965_2796_3836 330
159 3300048925 Ga0496122_0043311 Ga0496122_0043311_1937_2977 330
160 3300048925 Ga0496122_0111065 Ga0496122_0111065_191_1267 330
161 3300048925 Ga0496122_0198909 Ga0496122_0198909_92_1144 330
162 3300048926 Ga0496123_0143454 Ga0496123_0143454_25_1065 330
163 3300048927 Ga0496124_0091864 Ga0496124_0091864_996_2036 330
164 3300048927 Ga0496124_0216265 Ga0496124_0216265_294_1370 330
165 3300048928 Ga0496125_0013715 Ga0496125_0013715_3177_4217 330
166 3300048928 Ga0496125_0014813 Ga0496125_0014813_4001_5077 330
167 3300048929 Ga0496126_0004541 Ga0496126_0004541_14861_15901 330
168 3300048929 Ga0496126_0048620 Ga0496126_0048620_1976_3052 330
169 iso_pu_bacteria 648028048 648170690 330

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01210

NAD_Gly3P_dh_N

NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus

20

179

0.98

PF07479

NAD_Gly3P_dh_C

NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus

198

339

0.98

PF20618

GPD_NAD_C_bact

Bacterial GPD, NAD-dependent C-terminal

258

324

0.89

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

20

140

0.88

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

20

123

0.88

PF02558

ApbA

Ketopantoate reductase PanE/ApbA

21

169

0.85

PF02737

3HCDH_N

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

20

138

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
5nmw-assembly2.cif.gz_D crystal structure of the pyrrolizidine alkaloid n-oxygenase from zonocerus variegatus in complex with fad 0.9691 3 33
5x6r-assembly2.cif.gz_B crystal structure of saccharomyces cerevisiae kmo in complex with ro 61-8048 0.9662 3 31
7e7h-assembly2.cif.gz_B crystal structure of a pseudooxynicotine amine oxidase pnao from pseudomonas putida s16 0.9621 4 31
7eme-assembly1.cif.gz_B putative leptospira interrogans recombinant l-amino acid oxidase 0.9561 3 35
3k96-assembly1.cif.gz_B 2.1 angstrom resolution crystal structure of glycerol-3-phosphate dehydrogenase (gpsa) from coxiella burnetii 0.95 2 311
ID Description Score Start End Superfamily
3k96B02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9885 174 311 1.10.1040.10
3k96B02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9815 174 311 1.10.1040.10
af_P9WN75_188_329_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9729 170 310 1.10.1040.10
af_Q2FYG1_190_332_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9723 174 316 1.10.1040.10
af_Q2FYG1_190_332_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9656 174 316 1.10.1040.10
ID Description Score Start End GO Terms
AF-D0Z1F4-F1-model_v4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.9943 170 309 GO:0005829
GO:0005975
GO:0006072
GO:0046474
GO:0047952
AF-A0A532EH12-F1-model_v4 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC 1.1.1.94) 0.9896 163 309 GO:0005829
GO:0005975
GO:0006072
GO:0006116
GO:0008654
GO:0047952
AF-A0A353QDK4-F1-model_v4 Glycerol-3-phosphate dehydrogenase 0.9895 149 249 GO:0005829
GO:0005975
GO:0006072
GO:0008654
AF-A0A7X5WJZ0-F1-model_v4 deleted 0.9875 147 286
AF-A0A6G3V3G7-F1-model_v4 deleted 0.9871 4 65

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pLDDT pTM Quality
91.25 0.87 High
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Predicted Structure (AlphaFold2)

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