F253508

General Info

Members Datasets Scaffolds Average Seq Length
168 89 336 330

Family's Representative Sequence

Representative Sequence 3300049586|Ga0501070_0002786|Ga0501070_0002786_13897_15057
Length 386
Sequence VNSCNAIEGTAGHYLLDRLPFTIIPVNGLARRTAVLFALAAAAVAALALWPRASRDYVVVHLVADPGFTARVHDATLVNAWGLAASPTGPWWTANEARGTSSLYAGDGQKQALTVTVDGGPTGVVYVSGRGFPVTANGRTGPARFVYAAEDGTIRAWSPDVPNGWSKEAEVVVDRAGTAAVFRGVTVARRPDGSQLLYATDFHNGRVDVFDDRWRPVRTAGFRDASIPEWYEPFGIEAIGDRIFVTYAQPAPVNGNDSPTGGYVDEFTLDGKLVAHVGQMGPLAEPWGVALAPKGFGSAGGALLVGNFGSGRIDVYRRTGDGWSFHGQLAGRDGKAIAVSGLWALRFGNGALAGPRTTLFFTAGPHRWFGASELQVHGLLGSIVPD

Samples

Sample ID Description Type Environment
1 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
2 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
21 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
22 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
23 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
24 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
28 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
29 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
43 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
44 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
45 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
46 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
47 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
48 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
49 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
50 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
51 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
52 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
53 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
54 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
55 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
56 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
57 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
58 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
59 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
60 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
61 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
62 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
63 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
64 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
65 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
66 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
67 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
68 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
69 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
70 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
71 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
72 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
75 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
76 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
77 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
78 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
79 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
80 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
81 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
82 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
83 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
84 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
85 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
86 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
87 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
88 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
89 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.81
Metatranscriptomes 1.19
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.6
Nodule 0
Rhizoplane 14.88
Rhizosphere 83.93
Stem 0
Stem Tuber 0
Unclassified 8.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501070_0002786 3300049586 Bacteria 15261
2 Ga0058862_12866187 3300004803 Unclassified 1198
3 Ga0070658_10028011 3300005327 Bacteria 4522
4 Ga0070658_10069130 3300005327 Bacteria 2889
5 Ga0070683_100000373 3300005329 Bacteria 31119
6 Ga0070683_100005135 3300005329 Bacteria 10887
7 Ga0070680_100159360 3300005336 Bacteria 1896
8 Ga0070714_100006112 3300005435 Bacteria 9252
9 Ga0070714_100072746 3300005435 Bacteria 2977
10 Ga0070714_100216140 3300005435 Bacteria 1760
11 Ga0070713_100021953 3300005436 Bacteria 4923
12 Ga0070713_100421211 3300005436 Bacteria 1250
13 Ga0070694_100178092 3300005444 Unclassified 1571
14 Ga0070681_10033188 3300005458 Bacteria 5181
15 Ga0070707_100139200 3300005468 Bacteria 2362
16 Ga0070679_100032259 3300005530 Bacteria 5180
17 Ga0070679_100100093 3300005530 Bacteria 2886
18 Ga0070679_100190231 3300005530 Unclassified 2022
19 Ga0070684_100005865 3300005535 Bacteria 9454
20 Ga0070664_100125115 3300005564 Bacteria 2254
21 Ga0068857_100117923 3300005577 Bacteria 2389
22 Ga0068856_100084149 3300005614 Bacteria 3160
23 Ga0068852_100087952 3300005616 Bacteria 2773
24 Ga0081455_10058083 3300005937 Bacteria 3276
25 Ga0081539_10011594 3300005985 Bacteria 6945
26 Ga0075365_10063932 3300006038 Bacteria 2464
27 Ga0070716_100001815 3300006173 Bacteria 9665
28 Ga0075433_10002835 3300006852 Bacteria 13271
29 Ga0075434_100004190 3300006871 Bacteria 12921
30 Ga0075436_100021011 3300006914 Bacteria 4479
31 Ga0075435_100001483 3300007076 Bacteria 15080
32 Ga0114129_10005599 3300009147 Bacteria 17775
33 Ga0114129_10092960 3300009147 Bacteria 4179
34 Ga0157369_10007664 3300013105 Bacteria 12418
35 Ga0157369_10120141 3300013105 Bacteria 2789
36 Ga0157377_10144241 3300014745 Bacteria 1466
37 Ga0182006_1026296 3300015261 Bacteria 2383
38 Ga0206353_11018911 3300020082 Bacteria 9470
39 Ga0207707_10123008 3300025912 Bacteria 2269
40 Ga0207660_10100991 3300025917 Bacteria 2155
41 Ga0207652_10028091 3300025921 Bacteria 4692
42 Ga0207652_10205965 3300025921 Bacteria 1771
43 Ga0207646_10028436 3300025922 Bacteria 5090
44 Ga0207646_10077279 3300025922 Bacteria 2975
45 Ga0207700_10000001 3300025928 Bacteria 1122509
46 Ga0207700_10109116 3300025928 Bacteria 2223
47 Ga0207664_10017651 3300025929 Bacteria 5237
48 Ga0207664_10017834 3300025929 Bacteria 5215
49 Ga0207664_10026178 3300025929 Bacteria 4405
50 Ga0207664_10052891 3300025929 Bacteria 3213
51 Ga0207664_10094410 3300025929 Bacteria 2458
52 Ga0207664_10286545 3300025929 Unclassified 1446
53 Ga0207665_10003348 3300025939 Bacteria 10735
54 Ga0207665_10066594 3300025939 Bacteria 2452
55 Ga0207661_10005839 3300025944 Bacteria 8684
56 Ga0207661_10117030 3300025944 Bacteria 2263
57 Ga0207679_10105617 3300025945 Bacteria 2212
58 Ga0207702_10078964 3300026078 Bacteria 2851
59 Ga0207674_10139083 3300026116 Bacteria 2389
60 Ga0207698_10237832 3300026142 Archaea 1657
61 Ga0395899_0073440 3300037312 Bacteria 2501
62 Ga0395899_0151031 3300037312 Bacteria 1646
63 Ga0395900_0005947 3300037418 Bacteria 12737
64 Ga0395900_0016255 3300037418 Bacteria 7583
65 Ga0395900_0022776 3300037418 Bacteria 6409
66 Ga0395900_0067150 3300037418 Bacteria 3684
67 Ga0395900_0072711 3300037418 Bacteria 3535
68 Ga0395900_0105418 3300037418 Bacteria 2896
69 Ga0395900_0118499 3300037418 Bacteria 2717
70 Ga0395900_0126511 3300037418 Bacteria 2621
71 Ga0395900_0458251 3300037418 Bacteria 1230
72 Ga0395898_0000926 3300037466 Bacteria 46928
73 Ga0395898_0003421 3300037466 Bacteria 17771
74 Ga0395898_0004053 3300037466 Bacteria 16091
75 Ga0395898_0007623 3300037466 Bacteria 11488
76 Ga0395898_0011385 3300037466 Bacteria 9237
77 Ga0395898_0130768 3300037466 Bacteria 2405
78 Ga0395898_0276781 3300037466 Bacteria 1601
79 Ga0395905_0008324 3300037471 Bacteria 10232
80 Ga0395905_0035715 3300037471 Bacteria 4667
81 Ga0395905_0039753 3300037471 Bacteria 4414
82 Ga0395905_0042787 3300037471 Bacteria 4249
83 Ga0395905_0504328 3300037471 Bacteria 1110
84 Ga0395901_0002084 3300038443 Bacteria 20504
85 Ga0395901_0002362 3300038443 Bacteria 19195
86 Ga0395901_0002751 3300038443 Bacteria 17751
87 Ga0395901_0003665 3300038443 Bacteria 15488
88 Ga0395901_0010074 3300038443 Bacteria 9578
89 Ga0395901_0051497 3300038443 Bacteria 4281
90 Ga0395901_0092929 3300038443 Bacteria 3158
91 Ga0436365_0984013 3300039437 Bacteria 1871
92 Ga0439448_0029901 3300042005 Bacteria 1726
93 Ga0466966_0188046 3300044684 Unclassified 1252
94 Ga0466963_0011136 3300044694 Bacteria 5470
95 Ga0466963_0115456 3300044694 Bacteria 1845
96 Ga0466963_0129633 3300044694 Bacteria 1741
97 Ga0466968_0125588 3300044735 Unclassified 1164
98 Ga0466959_0001192 3300045049 Bacteria 15698
99 Ga0466958_0029702 3300045836 Bacteria 3244
100 Ga0466958_0209692 3300045836 Bacteria 1241
101 Ga0466967_0001857 3300045976 Bacteria 12727
102 Ga0466967_0020396 3300045976 Bacteria 5356
103 Ga0466967_0020537 3300045976 Bacteria 5343
104 Ga0466967_0041429 3300045976 Bacteria 3970
105 Ga0466967_0056039 3300045976 Bacteria 3474
106 Ga0466967_0056330 3300045976 Bacteria 3465
107 Ga0466967_0071435 3300045976 Bacteria 3108
108 Ga0466967_0155481 3300045976 Bacteria 2142
109 Ga0466967_0533898 3300045976 Bacteria 1154
110 Ga0495641_0071861 3300046461 Unclassified 1553
111 Ga0495630_0247914 3300046517 Bacteria 1361
112 Ga0495642_0037140 3300046528 Bacteria 1970
113 Ga0495613_0156084 3300046689 Unclassified 1626
114 Ga0496101_0007580 3300048904 Bacteria 7044
115 Ga0496102_0059038 3300048905 Bacteria 3507
116 Ga0496102_0083453 3300048905 Bacteria 2948
117 Ga0496104_0014701 3300048907 Bacteria 7072
118 Ga0496105_0007125 3300048908 Bacteria 8626
119 Ga0496106_0063901 3300048909 Bacteria 2799
120 Ga0496107_0027928 3300048910 Bacteria 4008
121 Ga0496108_0079447 3300048911 Bacteria 2778
122 Ga0496109_0002443 3300048912 Bacteria 15564
123 Ga0496109_0008788 3300048912 Bacteria 8603
124 Ga0496109_0123712 3300048912 Bacteria 2411
125 Ga0496109_0562781 3300048912 Unclassified 1075
126 Ga0496110_0015219 3300048913 Bacteria 6399
127 Ga0496110_0053221 3300048913 Bacteria 3558
128 Ga0496111_0022947 3300048914 Bacteria 4376
129 Ga0496111_0025597 3300048914 Bacteria 4164
130 Ga0496111_0288373 3300048914 Unclassified 1217
131 Ga0496112_0001207 3300048915 Bacteria 19399
132 Ga0496112_0036804 3300048915 Bacteria 4775
133 Ga0496112_0195071 3300048915 Bacteria 1986
134 Ga0496112_0195699 3300048915 Bacteria 1982
135 Ga0496113_0054006 3300048916 Bacteria 3006
136 Ga0496113_0183100 3300048916 Unclassified 1661
137 Ga0496114_0004424 3300048917 Bacteria 10906
138 Ga0496114_0164307 3300048917 Bacteria 1932
139 Ga0501034_0089658 3300049571 Bacteria 3073
140 Ga0501047_0130115 3300049581 Bacteria 2398
141 Ga0501047_0205845 3300049581 Bacteria 1827
142 Ga0501067_0085257 3300049583 Bacteria 1753
143 Ga0501069_0001401 3300049585 Bacteria 11825
144 Ga0501069_0056497 3300049585 Bacteria 2187
145 Ga0501069_0153705 3300049585 Unclassified 1323
146 Ga0501070_0008964 3300049586 Bacteria 8461
147 Ga0501070_0059812 3300049586 Bacteria 3158
148 Ga0501070_0374731 3300049586 Bacteria 1153
149 Ga0501072_0009271 3300049588 Bacteria 7478
150 Ga0501073_0006490 3300049589 Bacteria 8704
151 Ga0501073_0047856 3300049589 Bacteria 3004
152 Ga0501074_0005026 3300049590 Bacteria 9492
153 Ga0501074_0167327 3300049590 Bacteria 1569
154 Ga0501079_0014332 3300049741 Bacteria 6044
155 Ga0501080_0013013 3300049742 Bacteria 7639
156 Ga0501083_0005263 3300049744 Bacteria 9153
157 Ga0501044_0335838 3300049823 Unclassified 1433
158 Ga0501044_0416176 3300049823 Bacteria 1255
159 nmdc:mga05p37_2767_c1 3300050507 Bacteria 20388
160 nmdc:mga05p37_422130_c1 3300050507 Unclassified 1552
161 nmdc:mga05p37_88314_c1 3300050507 Bacteria 3821
162 nmdc:mga06r32_41637_c1 3300050510 Bacteria 4365
163 nmdc:mga0n895_4467_c1 3300050512 Bacteria 11495
164 nmdc:mga0rr50_3485_c1 3300050513 Bacteria 9064
165 nmdc:mga08x19_370139_c1 3300050514 Bacteria 1002
166 nmdc:mga08x19_4456_c1 3300050514 Bacteria 8296
167 nmdc:mga0a205_1771_c1 3300050515 Bacteria 18694
168 Ga0530510_0057944 3300061734 Bacteria 2800
169 Ga0501070_0002786
170 Ga0058862_12866187
171 Ga0070658_10028011
172 Ga0070658_10069130
173 Ga0070683_100000373
174 Ga0070683_100005135
175 Ga0070680_100159360
176 Ga0070714_100006112
177 Ga0070714_100072746
178 Ga0070714_100216140
179 Ga0070713_100021953
180 Ga0070713_100421211
181 Ga0070694_100178092
182 Ga0070681_10033188
183 Ga0070707_100139200
184 Ga0070679_100032259
185 Ga0070679_100100093
186 Ga0070679_100190231
187 Ga0070684_100005865
188 Ga0070664_100125115
189 Ga0068857_100117923
190 Ga0068856_100084149
191 Ga0068852_100087952
192 Ga0081455_10058083
193 Ga0081539_10011594
194 Ga0075365_10063932
195 Ga0070716_100001815
196 Ga0075433_10002835
197 Ga0075434_100004190
198 Ga0075436_100021011
199 Ga0075435_100001483
200 Ga0114129_10005599
201 Ga0114129_10092960
202 Ga0157369_10007664
203 Ga0157369_10120141
204 Ga0157377_10144241
205 Ga0182006_1026296
206 Ga0206353_11018911
207 Ga0207707_10123008
208 Ga0207660_10100991
209 Ga0207652_10028091
210 Ga0207652_10205965
211 Ga0207646_10028436
212 Ga0207646_10077279
213 Ga0207700_10000001
214 Ga0207700_10109116
215 Ga0207664_10017651
216 Ga0207664_10017834
217 Ga0207664_10026178
218 Ga0207664_10052891
219 Ga0207664_10094410
220 Ga0207664_10286545
221 Ga0207665_10003348
222 Ga0207665_10066594
223 Ga0207661_10005839
224 Ga0207661_10117030
225 Ga0207679_10105617
226 Ga0207702_10078964
227 Ga0207674_10139083
228 Ga0207698_10237832
229 Ga0395899_0073440
230 Ga0395899_0151031
231 Ga0395900_0005947
232 Ga0395900_0016255
233 Ga0395900_0022776
234 Ga0395900_0067150
235 Ga0395900_0072711
236 Ga0395900_0105418
237 Ga0395900_0118499
238 Ga0395900_0126511
239 Ga0395900_0458251
240 Ga0395898_0000926
241 Ga0395898_0003421
242 Ga0395898_0004053
243 Ga0395898_0007623
244 Ga0395898_0011385
245 Ga0395898_0130768
246 Ga0395898_0276781
247 Ga0395905_0008324
248 Ga0395905_0035715
249 Ga0395905_0039753
250 Ga0395905_0042787
251 Ga0395905_0504328
252 Ga0395901_0002084
253 Ga0395901_0002362
254 Ga0395901_0002751
255 Ga0395901_0003665
256 Ga0395901_0010074
257 Ga0395901_0051497
258 Ga0395901_0092929
259 Ga0436365_0984013
260 Ga0439448_0029901
261 Ga0466966_0188046
262 Ga0466963_0011136
263 Ga0466963_0115456
264 Ga0466963_0129633
265 Ga0466968_0125588
266 Ga0466959_0001192
267 Ga0466958_0029702
268 Ga0466958_0209692
269 Ga0466967_0001857
270 Ga0466967_0020396
271 Ga0466967_0020537
272 Ga0466967_0041429
273 Ga0466967_0056039
274 Ga0466967_0056330
275 Ga0466967_0071435
276 Ga0466967_0155481
277 Ga0466967_0533898
278 Ga0495641_0071861
279 Ga0495630_0247914
280 Ga0495642_0037140
281 Ga0495613_0156084
282 Ga0496101_0007580
283 Ga0496102_0059038
284 Ga0496102_0083453
285 Ga0496104_0014701
286 Ga0496105_0007125
287 Ga0496106_0063901
288 Ga0496107_0027928
289 Ga0496108_0079447
290 Ga0496109_0002443
291 Ga0496109_0008788
292 Ga0496109_0123712
293 Ga0496109_0562781
294 Ga0496110_0015219
295 Ga0496110_0053221
296 Ga0496111_0022947
297 Ga0496111_0025597
298 Ga0496111_0288373
299 Ga0496112_0001207
300 Ga0496112_0036804
301 Ga0496112_0195071
302 Ga0496112_0195699
303 Ga0496113_0054006
304 Ga0496113_0183100
305 Ga0496114_0004424
306 Ga0496114_0164307
307 Ga0501034_0089658
308 Ga0501047_0130115
309 Ga0501047_0205845
310 Ga0501067_0085257
311 Ga0501069_0001401
312 Ga0501069_0056497
313 Ga0501069_0153705
314 Ga0501070_0008964
315 Ga0501070_0059812
316 Ga0501070_0374731
317 Ga0501072_0009271
318 Ga0501073_0006490
319 Ga0501073_0047856
320 Ga0501074_0005026
321 Ga0501074_0167327
322 Ga0501079_0014332
323 Ga0501080_0013013
324 Ga0501083_0005263
325 Ga0501044_0335838
326 Ga0501044_0416176
327 nmdc:mga05p37_2767_c1
328 nmdc:mga05p37_422130_c1
329 nmdc:mga05p37_88314_c1
330 nmdc:mga06r32_41637_c1
331 nmdc:mga0n895_4467_c1
332 nmdc:mga0rr50_3485_c1
333 nmdc:mga08x19_370139_c1
334 nmdc:mga08x19_4456_c1
335 nmdc:mga0a205_1771_c1
336 Ga0530510_0057944

MSA Aligner

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Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ijq-assembly1.cif.gz_A crystal structure of the ldl receptor ywtd-egf domain pair 0.7366 80 343
3m0c-assembly1.cif.gz_C the x-ray crystal structure of pcsk9 in complex with the ldl receptor 0.7324 80 343
7qrv-assembly2.cif.gz_B crystal structure of nhl domain of trim2 (full c-terminal) 0.732 58 353
3v65-assembly1.cif.gz_D crystal structure of agrin and lrp4 complex 0.7308 59 343
7zqg-assembly1.cif.gz_A crystal structure of pizza6-ksh-tsh with silicotungstic acid (sta) polyoxometalate 0.709 37 353
ID Description Score Start End Superfamily
af_A0A2R8PYI8_1_196_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7947 57 191 2.120.10.30
af_Q93791_1288_1549_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7704 73 343 2.120.10.30
af_A8JRD0_597_855_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7604 81 343 2.120.10.30
af_K7KIW4_183_318_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.7438 59 186 2.40.128.630
af_A4QPB2_1_245_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7361 132 343 2.120.10.30
ID Description Score Start End GO Terms
AF-A0A534JXD1-F1-model_v4 TIGR03118 family protein 0.9683 244 359
AF-A0A2V7QA52-F1-model_v4 TIGR03118 family protein 0.958 36 359
AF-A0A7W1SZB0-F1-model_v4 TIGR03118 family protein 0.9537 118 357
AF-A0A534WDR5-F1-model_v4 TIGR03118 family protein 0.9489 32 357
AF-A0A535S6Y3-F1-model_v4 TIGR03118 family protein 0.9472 38 357

Map