F253216

General Info

Members Datasets Scaffolds Average Seq Length
168 110 168 712

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0000073|Ga0451576_0000073_111699_114362
Length 796
Sequence MDSKTLKVLEYPKVLERLAANCDFSASAALARALEPTTSYDVALLRQQETTEARRLISVQDVSIGGAHDVREKVELARHGGVVDAVDLLDIKYTLIACRELKRTLLGKGMQQARDGSAPRPDHPYPRLAELALSLPTPLGVVDAITRTISDKGEVLDSASPKLGAIRAEMRVSRERLMSRLQKYLGDSKTSQMLQDTIITQRDGRYVIPLRAEFKGQIKSIVHDQSSSGATLFIEPIAVVELNNKMREVELAERDEIRRVLAEVSAQVGLVGGEIISGVEALAEIDLAFAKAKYAEEIRASEPILHPQTKEKGVIRLFKSRHPLIDPATVVANDIDLAPGTRAVVITGPNTGGKTVSLKTVGLLVAMAQSGLHIPAQSGSELSMFHDVFADIGDEQSIEQSLSTFSGHITNIIRILKKIDARSLVIFDELGAGTDPQEGAALARAILSHLLERGATTFVATHYPELKTFAHSVEGVVNASLEFDVATLRPTYKLTIGLPGRSNALAIAARLGLPAEIIADAKSQVDPDELRADKLLDDIRKERNRSLNQELQKRLDAIEDERRDVVAKLKRNLGRLKAEMKKLHQPLEALARLEAKVEAVEEKAVAPVERRPKTEDQGSKPVISGPAGPYKLGEKVIVRTLGSEGIITALSESEAEVQIGSLRIRAKLGEIGRRSAEDEGPRTEDPAAGRTRRIKKMADNLPASTSVPGVLTASPGLELDLRGQRAEDALLMLENYLNKAYLVGMPFVRIIHGKGTGKLRQEVRAALKENAQVASFEEGHPNEGGDGVTVAMIAKD

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
3 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
35 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
52 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
53 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
54 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
55 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
56 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
57 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
58 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
59 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
60 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
61 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
62 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
63 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
64 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
65 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
66 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
67 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
68 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
69 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
70 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
71 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
72 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
73 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
74 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
75 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
76 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
77 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
78 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
79 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
80 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
81 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
82 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
83 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
84 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
85 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
86 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
87 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
88 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
89 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
90 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
91 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
92 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
93 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
99 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
100 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
101 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
102 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
103 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
104 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
105 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
106 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
107 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
108 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
109 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
110 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 10.12
Rhizosphere 89.29
Stem 0
Stem Tuber 0
Unclassified 0.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100000514 3300005329 Bacteria 27185
2 Ga0070683_100002699 3300005329 Bacteria 14176
3 Ga0070683_100022139 3300005329 Bacteria 5678
4 Ga0070687_100026597 3300005343 Bacteria 2787
5 Ga0070673_100046071 3300005364 Bacteria 3385
6 Ga0070688_100001991 3300005365 Bacteria 10296
7 Ga0070659_100010195 3300005366 Bacteria 6913
8 Ga0070714_100009007 3300005435 Bacteria 7818
9 Ga0070713_100002262 3300005436 Bacteria 12504
10 Ga0070701_10002034 3300005438 Bacteria 7674
11 Ga0070708_100005122 3300005445 Bacteria 10373
12 Ga0070708_100051313 3300005445 Bacteria 3655
13 Ga0070706_100000195 3300005467 Bacteria 75731
14 Ga0070706_100003625 3300005467 Bacteria 15111
15 Ga0070706_100005380 3300005467 Bacteria 12195
16 Ga0070707_100000870 3300005468 Bacteria 29951
17 Ga0070707_100001138 3300005468 Bacteria 26187
18 Ga0070707_100006926 3300005468 Bacteria 10506
19 Ga0070707_100008229 3300005468 Bacteria 9674
20 Ga0070698_100022090 3300005471 Bacteria 6662
21 Ga0070698_100071575 3300005471 Bacteria 3477
22 Ga0070699_100008556 3300005518 Bacteria 8866
23 Ga0070684_100000062 3300005535 Bacteria 70370
24 Ga0070684_100003003 3300005535 Bacteria 12563
25 Ga0070697_100006981 3300005536 Bacteria 8784
26 Ga0070686_100012147 3300005544 Bacteria 4899
27 Ga0070695_100014186 3300005545 Bacteria 4800
28 Ga0070696_100000309 3300005546 Bacteria 29644
29 Ga0070696_100031014 3300005546 Bacteria 3662
30 Ga0070704_100020865 3300005549 Bacteria 4235
31 Ga0068857_100000149 3300005577 Bacteria 43269
32 Ga0068856_100000771 3300005614 Bacteria 34760
33 Ga0068864_100045617 3300005618 Bacteria 3759
34 Ga0068863_100023816 3300005841 Bacteria 5844
35 Ga0081539_10004450 3300005985 Bacteria 15472
36 Ga0081539_10004680 3300005985 Bacteria 14849
37 Ga0075428_100000397 3300006844 Bacteria 43115
38 Ga0075434_100073682 3300006871 Bacteria 3407
39 Ga0111539_10010485 3300009094 Bacteria 11660
40 Ga0111539_10012689 3300009094 Bacteria 10552
41 Ga0105245_10034165 3300009098 Bacteria 4509
42 Ga0105243_10007822 3300009148 Bacteria 8220
43 Ga0105241_10000729 3300009174 Bacteria 24921
44 Ga0105239_10096050 3300010375 Bacteria 3274
45 Ga0105239_10100175 3300010375 Bacteria 3204
46 Ga0157369_10044189 3300013105 Bacteria 4850
47 Ga0163163_10007088 3300014325 Bacteria 9856
48 Ga0157379_10008457 3300014968 Bacteria 8949
49 Ga0157379_10015255 3300014968 Bacteria 6739
50 Ga0207643_10003958 3300025908 Bacteria 7974
51 Ga0207684_10002101 3300025910 Bacteria 20420
52 Ga0207684_10005044 3300025910 Bacteria 12304
53 Ga0207684_10016262 3300025910 Bacteria 6387
54 Ga0207684_10021424 3300025910 Bacteria 5519
55 Ga0207684_10025413 3300025910 Bacteria 5047
56 Ga0207654_10000860 3300025911 Bacteria 16810
57 Ga0207657_10010456 3300025919 Bacteria 9257
58 Ga0207646_10001758 3300025922 Bacteria 26266
59 Ga0207646_10001760 3300025922 Bacteria 26247
60 Ga0207646_10007446 3300025922 Bacteria 11123
61 Ga0207646_10089949 3300025922 Bacteria 2748
62 Ga0207700_10000702 3300025928 Bacteria 19392
63 Ga0207664_10012296 3300025929 Bacteria 6115
64 Ga0207706_10003260 3300025933 Bacteria 15543
65 Ga0207706_10006924 3300025933 Bacteria 10484
66 Ga0207706_10055578 3300025933 Bacteria 3490
67 Ga0207691_10042204 3300025940 Bacteria 4205
68 Ga0207689_10012003 3300025942 Bacteria 7425
69 Ga0207661_10000081 3300025944 Bacteria 66494
70 Ga0207708_10002944 3300026075 Bacteria 12557
71 Ga0207702_10002464 3300026078 Bacteria 17519
72 Ga0207641_10021813 3300026088 Bacteria 5266
73 Ga0207674_10000334 3300026116 Bacteria 60268
74 Ga0207674_10009674 3300026116 Bacteria 10988
75 Ga0207683_10020115 3300026121 Bacteria 5706
76 Ga0207428_10006095 3300027907 Bacteria 11150
77 Ga0265326_10004546 3300028558 Bacteria 4438
78 Ga0265320_10008140 3300031240 Bacteria 6441
79 Ga0265329_10005224 3300031242 Bacteria 5277
80 Ga0265340_10008796 3300031247 Bacteria 5442
81 Ga0265339_10037627 3300031249 Bacteria 2704
82 Ga0265327_10029197 3300031251 Bacteria 3140
83 Ga0265316_10004701 3300031344 Bacteria 13529
84 Ga0265313_10021151 3300031595 Bacteria 3565
85 Ga0316575_10005359 3300031665 Bacteria 4571
86 Ga0316579_10000644 3300031691 Bacteria 11847
87 Ga0316579_10012324 3300031691 Bacteria 3656
88 Ga0316579_10012862 3300031691 Bacteria 3591
89 Ga0316576_10006335 3300031727 Bacteria 7356
90 Ga0316576_10009203 3300031727 Bacteria 6365
91 Ga0316576_10011479 3300031727 Bacteria 5807
92 Ga0316576_10015461 3300031727 Bacteria 5123
93 Ga0316578_10012601 3300031728 Bacteria 4461
94 Ga0316578_10018535 3300031728 Bacteria 3818
95 Ga0307405_10000648 3300031731 Bacteria 13427
96 Ga0316577_10003885 3300031733 Bacteria 7621
97 Ga0316577_10019998 3300031733 Unclassified 3708
98 Ga0307413_10000361 3300031824 Bacteria 14528
99 Ga0307410_10000204 3300031852 Bacteria 22235
100 Ga0307407_10000173 3300031903 Bacteria 19580
101 Ga0307414_10016841 3300032004 Bacteria 4458
102 Ga0307411_10000371 3300032005 Bacteria 15251
103 Ga0307415_100004545 3300032126 Bacteria 7226
104 Ga0316583_10008122 3300032133 Bacteria 3782
105 Ga0316585_10002848 3300032137 Bacteria 4709
106 Ga0316585_10003686 3300032137 Bacteria 4223
107 Ga0316580_10000895 3300032139 Bacteria 7365
108 Ga0316574_0043887 3300035398 Bacteria 2764
109 Ga0373933_0000771 3300035724 Bacteria 19579
110 Ga0316582_0011055 3300036647 Bacteria 4977
111 Ga0316582_0052611 3300036647 Viruses 2589
112 Ga0316584_0009839 3300036712 Bacteria 6655
113 Ga0316584_0039461 3300036712 Bacteria 3514
114 Ga0316581_0003695 3300037588 Bacteria 3833
115 Ga0451577_0036876 3300042876 Bacteria 4402
116 Ga0453683_0032407 3300044673 Bacteria 3298
117 Ga0453684_0000012 3300044712 Bacteria 1062512
118 Ga0453684_0000056 3300044712 Bacteria 513389
119 Ga0453684_0000162 3300044712 Bacteria 298154
120 Ga0453684_0000981 3300044712 Bacteria 93385
121 Ga0453684_0002839 3300044712 Bacteria 40789
122 Ga0453684_0019885 3300044712 Bacteria 10187
123 Ga0453684_0029436 3300044712 Bacteria 7795
124 Ga0453684_0047622 3300044712 Bacteria 5682
125 Ga0453684_0101957 3300044712 Bacteria 3510
126 Ga0453684_0115659 3300044712 Bacteria 3250
127 Ga0453684_0132422 3300044712 Bacteria 2990
128 Ga0451576_0000073 3300045051 Bacteria 253094
129 Ga0451576_0000915 3300045051 Bacteria 55897
130 Ga0451576_0054917 3300045051 Bacteria 4169
131 Ga0496104_0007494 3300048907 Bacteria 9648
132 Ga0496104_0042024 3300048907 Bacteria 4288
133 Ga0496106_0067066 3300048909 Bacteria 2735
134 Ga0496108_0011602 3300048911 Bacteria 7168
135 Ga0496109_0001853 3300048912 Bacteria 17511
136 Ga0496109_0009521 3300048912 Bacteria 8280
137 Ga0496109_0013896 3300048912 Bacteria 6999
138 Ga0496110_0005755 3300048913 Bacteria 9736
139 Ga0496110_0063663 3300048913 Bacteria 3259
140 Ga0496112_0000010 3300048915 Bacteria 245046
141 Ga0496112_0002339 3300048915 Bacteria 15218
142 Ga0496112_0021963 3300048915 Bacteria 6074
143 Ga0496112_0036412 3300048915 Bacteria 4800
144 Ga0496112_0106537 3300048915 Unclassified 2773
145 Ga0496113_0010920 3300048916 Bacteria 6028
146 Ga0496113_0056653 3300048916 Bacteria 2943
147 Ga0496114_0034752 3300048917 Bacteria 4160
148 Ga0496125_0008270 3300048928 Bacteria 10924
149 Ga0501036_0079481 3300049572 Bacteria 2774
150 Ga0501040_0008358 3300049576 Bacteria 6730
151 Ga0501041_0004245 3300049577 Bacteria 8298
152 Ga0501043_0044136 3300049579 Bacteria 3505
153 Ga0501046_0054168 3300049580 Bacteria 3157
154 Ga0501071_0002457 3300049587 Bacteria 11256
155 Ga0501072_0006711 3300049588 Bacteria 8749
156 Ga0501075_0012134 3300049591 Bacteria 6117
157 Ga0501076_0007135 3300049592 Bacteria 8122
158 Ga0501076_0014300 3300049592 Bacteria 5974
159 Ga0501079_0042205 3300049741 Bacteria 3523
160 Ga0501081_0024904 3300049743 Bacteria 4022
161 nmdc:mga05p37_26798_c1 3300050507 Bacteria 7010
162 nmdc:mga08y16_151_c1 3300050511 Bacteria 60046
163 nmdc:mga08y16_56840_c1 3300050511 Bacteria 4089
164 nmdc:mga0n895_73865_c1 3300050512 Bacteria 3386
165 Ga0495612_0001708 3300053078 Bacteria 9007
166 Ga0501084_0020072 3300054114 Bacteria 5572
167 Ga0501082_0006618 3300060353 Bacteria 10027
168 Ga0530510_0017984 3300061734 Bacteria 5011

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005544 Ga0070686_100012147 Ga0070686_1000121472 629
2 3300044712 Ga0453684_0047622 Ga0453684_0047622_105_2621 630
3 3300026116 Ga0207674_10009674 Ga0207674_100096742 632
4 3300049572 Ga0501036_0079481 Ga0501036_0079481_100_2454 634
5 3300049591 Ga0501075_0012134 Ga0501075_0012134_127_2481 634
6 3300049741 Ga0501079_0042205 Ga0501079_0042205_358_2712 634
7 3300044712 Ga0453684_0000012 Ga0453684_0000012_91290_93746 636
8 3300048907 Ga0496104_0042024 Ga0496104_0042024_1737_4130 637
9 3300048915 Ga0496112_0021963 Ga0496112_0021963_3523_5916 637
10 3300048916 Ga0496113_0056653 Ga0496113_0056653_242_2635 637
11 3300005365 Ga0070688_100001991 Ga0070688_1000019915 638
12 3300005438 Ga0070701_10002034 Ga0070701_100020344 638
13 3300005618 Ga0068864_100045617 Ga0068864_1000456172 638
14 3300009094 Ga0111539_10012689 Ga0111539_100126897 638
15 3300025908 Ga0207643_10003958 Ga0207643_100039582 638
16 3300026121 Ga0207683_10020115 Ga0207683_100201152 638
17 3300025919 Ga0207657_10010456 Ga0207657_100104562 639
18 3300025933 Ga0207706_10006924 Ga0207706_100069243 639
19 3300025940 Ga0207691_10042204 Ga0207691_100422042 639
20 3300025942 Ga0207689_10012003 Ga0207689_100120033 639
21 3300026075 Ga0207708_10002944 Ga0207708_100029449 639
22 3300031691 Ga0316579_10012862 Ga0316579_100128623 639
23 3300048912 Ga0496109_0009521 Ga0496109_0009521_43_2412 639
24 3300005366 Ga0070659_100010195 Ga0070659_1000101954 640
25 3300009148 Ga0105243_10007822 Ga0105243_100078223 640
26 3300010375 Ga0105239_10100175 Ga0105239_101001752 640
27 3300031251 Ga0265327_10029197 Ga0265327_100291972 641
28 3300036647 Ga0316582_0052611 Ga0316582_0052611_240_2579 642
29 3300031727 Ga0316576_10009203 Ga0316576_100092033 644
30 3300036712 Ga0316584_0009839 Ga0316584_0009839_1863_4244 644
31 3300006871 Ga0075434_100073682 Ga0075434_1000736821 646
32 3300050512 nmdc:mga0n895_73865_c1 nmdc:mga0n895_73865_c1_115_2517 646
33 3300031727 Ga0316576_10006335 Ga0316576_100063352 651
34 3300049576 Ga0501040_0008358 Ga0501040_0008358_662_3061 651
35 3300049580 Ga0501046_0054168 Ga0501046_0054168_137_2536 651
36 3300049577 Ga0501041_0004245 Ga0501041_0004245_862_3225 652
37 3300049588 Ga0501072_0006711 Ga0501072_0006711_2506_4869 652
38 3300049592 Ga0501076_0007135 Ga0501076_0007135_2447_4810 652
39 3300049743 Ga0501081_0024904 Ga0501081_0024904_572_2935 652
40 3300054114 Ga0501084_0020072 Ga0501084_0020072_1785_4148 652
41 3300060353 Ga0501082_0006618 Ga0501082_0006618_3880_6243 652
42 3300061734 Ga0530510_0017984 Ga0530510_0017984_1575_3938 652
43 3300049592 Ga0501076_0014300 Ga0501076_0014300_1422_3821 653
44 3300005467 Ga0070706_100000195 Ga0070706_10000019571 655
45 3300005468 Ga0070707_100001138 Ga0070707_10000113813 655
46 3300025910 Ga0207684_10005044 Ga0207684_100050442 655
47 3300025922 Ga0207646_10001758 Ga0207646_1000175811 655
48 3300005985 Ga0081539_10004450 Ga0081539_1000445011 656
49 3300025933 Ga0207706_10055578 Ga0207706_100555782 661
50 3300044712 Ga0453684_0000162 Ga0453684_0000162_110160_112769 661
51 3300050511 nmdc:mga08y16_56840_c1 nmdc:mga08y16_56840_c1_1693_4047 661
52 3300009098 Ga0105245_10034165 Ga0105245_100341654 664
53 3300025910 Ga0207684_10025413 Ga0207684_100254132 665
54 3300010375 Ga0105239_10096050 Ga0105239_100960502 666
55 3300048909 Ga0496106_0067066 Ga0496106_0067066_151_2565 666
56 3300048911 Ga0496108_0011602 Ga0496108_0011602_186_2549 666
57 3300048912 Ga0496109_0001853 Ga0496109_0001853_604_2967 666
58 3300048913 Ga0496110_0005755 Ga0496110_0005755_5410_7773 666
59 3300048915 Ga0496112_0036412 Ga0496112_0036412_551_2914 666
60 3300048916 Ga0496113_0010920 Ga0496113_0010920_2577_4940 666
61 3300005545 Ga0070695_100014186 Ga0070695_1000141863 668
62 3300005546 Ga0070696_100031014 Ga0070696_1000310141 668
63 3300049587 Ga0501071_0002457 Ga0501071_0002457_4172_6535 668
64 3300005549 Ga0070704_100020865 Ga0070704_1000208652 670
65 3300014325 Ga0163163_10007088 Ga0163163_100070883 670
66 3300014968 Ga0157379_10008457 Ga0157379_100084575 670
67 3300048912 Ga0496109_0013896 Ga0496109_0013896_1410_3779 670
68 3300048917 Ga0496114_0034752 Ga0496114_0034752_288_2657 670
69 3300005468 Ga0070707_100000870 Ga0070707_1000008703 671
70 3300025922 Ga0207646_10001760 Ga0207646_1000176012 671
71 3300031249 Ga0265339_10037627 Ga0265339_100376272 671
72 3300044712 Ga0453684_0002839 Ga0453684_0002839_19599_22007 671
73 3300048907 Ga0496104_0007494 Ga0496104_0007494_1633_4002 671
74 3300049579 Ga0501043_0044136 Ga0501043_0044136_402_2753 671
75 3300005471 Ga0070698_100071575 Ga0070698_1000715753 672
76 3300028558 Ga0265326_10004546 Ga0265326_100045462 672
77 3300031344 Ga0265316_10004701 Ga0265316_100047014 672
78 3300005546 Ga0070696_100000309 Ga0070696_1000003095 674
79 3300006844 Ga0075428_100000397 Ga0075428_10000039729 674
80 3300031733 Ga0316577_10019998 Ga0316577_100199982 674
81 3300050507 nmdc:mga05p37_26798_c1 nmdc:mga05p37_26798_c1_551_2968 674
82 3300005518 Ga0070699_100008556 Ga0070699_1000085562 675
83 3300044712 Ga0453684_0029436 Ga0453684_0029436_1603_4008 675
84 3300005536 Ga0070697_100006981 Ga0070697_1000069813 677
85 3300045051 Ga0451576_0054917 Ga0451576_0054917_52_2463 677
86 3300005841 Ga0068863_100023816 Ga0068863_1000238163 678
87 3300014968 Ga0157379_10015255 Ga0157379_100152553 678
88 3300026088 Ga0207641_10021813 Ga0207641_100218133 678
89 3300032126 Ga0307415_100004545 Ga0307415_1000045454 678
90 3300044712 Ga0453684_0000981 Ga0453684_0000981_21968_24358 678
91 3300005445 Ga0070708_100005122 Ga0070708_1000051226 680
92 3300005467 Ga0070706_100005380 Ga0070706_1000053807 680
93 3300025910 Ga0207684_10002101 Ga0207684_100021013 680
94 3300025922 Ga0207646_10089949 Ga0207646_100899491 680
95 3300048915 Ga0496112_0000010 Ga0496112_0000010_12866_15262 680
96 3300053078 Ga0495612_0001708 Ga0495612_0001708_4736_7183 680
97 3300005468 Ga0070707_100006926 Ga0070707_1000069266 681
98 3300025910 Ga0207684_10021424 Ga0207684_100214244 682
99 3300031731 Ga0307405_10000648 Ga0307405_100006486 682
100 3300031824 Ga0307413_10000361 Ga0307413_1000036110 682
101 3300031852 Ga0307410_10000204 Ga0307410_1000020420 682
102 3300031903 Ga0307407_10000173 Ga0307407_100001735 682
103 3300032004 Ga0307414_10016841 Ga0307414_100168411 682
104 3300032005 Ga0307411_10000371 Ga0307411_1000037110 682
105 3300005471 Ga0070698_100022090 Ga0070698_1000220902 683
106 3300045051 Ga0451576_0000915 Ga0451576_0000915_34810_37401 684
107 3300031727 Ga0316576_10015461 Ga0316576_100154613 685
108 3300032137 Ga0316585_10002848 Ga0316585_100028483 685
109 3300005468 Ga0070707_100008229 Ga0070707_1000082293 686
110 3300005985 Ga0081539_10004680 Ga0081539_100046802 686
111 3300009174 Ga0105241_10000729 Ga0105241_1000072918 686
112 3300025911 Ga0207654_10000860 Ga0207654_1000086018 686
113 3300025922 Ga0207646_10007446 Ga0207646_100074463 686
114 3300031691 Ga0316579_10000644 Ga0316579_100006445 686
115 3300031728 Ga0316578_10012601 Ga0316578_100126012 686
116 3300032133 Ga0316583_10008122 Ga0316583_100081221 686
117 3300032137 Ga0316585_10003686 Ga0316585_100036862 686
118 3300032139 Ga0316580_10000895 Ga0316580_100008954 686
119 3300036647 Ga0316582_0011055 Ga0316582_0011055_1854_4298 686
120 3300036712 Ga0316584_0039461 Ga0316584_0039461_391_2835 686
121 3300037588 Ga0316581_0003695 Ga0316581_0003695_167_2611 686
122 3300005329 Ga0070683_100002699 Ga0070683_1000026991 687
123 3300005329 Ga0070683_100022139 Ga0070683_1000221392 687
124 3300005435 Ga0070714_100009007 Ga0070714_1000090073 687
125 3300005436 Ga0070713_100002262 Ga0070713_10000226210 687
126 3300005445 Ga0070708_100051313 Ga0070708_1000513132 687
127 3300005467 Ga0070706_100003625 Ga0070706_1000036254 687
128 3300005535 Ga0070684_100000062 Ga0070684_10000006239 687
129 3300005535 Ga0070684_100003003 Ga0070684_1000030037 687
130 3300005577 Ga0068857_100000149 Ga0068857_10000014917 687
131 3300005614 Ga0068856_100000771 Ga0068856_1000007714 687
132 3300013105 Ga0157369_10044189 Ga0157369_100441892 687
133 3300025910 Ga0207684_10016262 Ga0207684_100162622 687
134 3300025928 Ga0207700_10000702 Ga0207700_100007022 687
135 3300025929 Ga0207664_10012296 Ga0207664_100122962 687
136 3300025933 Ga0207706_10003260 Ga0207706_1000326011 687
137 3300025944 Ga0207661_10000081 Ga0207661_1000008136 687
138 3300026078 Ga0207702_10002464 Ga0207702_1000246414 687
139 3300026116 Ga0207674_10000334 Ga0207674_1000033438 687
140 3300048913 Ga0496110_0063663 Ga0496110_0063663_62_2440 687
141 3300048915 Ga0496112_0002339 Ga0496112_0002339_8598_10976 687
142 3300031727 Ga0316576_10011479 Ga0316576_100114792 688
143 3300031728 Ga0316578_10018535 Ga0316578_100185351 688
144 3300035398 Ga0316574_0043887 Ga0316574_0043887_168_2567 688
145 3300042876 Ga0451577_0036876 Ga0451577_0036876_1026_3380 688
146 3300048915 Ga0496112_0106537 Ga0496112_0106537_69_2480 688
147 3300031240 Ga0265320_10008140 Ga0265320_100081403 689
148 3300031242 Ga0265329_10005224 Ga0265329_100052242 689
149 3300031247 Ga0265340_10008796 Ga0265340_100087962 689
150 3300031595 Ga0265313_10021151 Ga0265313_100211512 689
151 3300031665 Ga0316575_10005359 Ga0316575_100053592 689
152 3300035724 Ga0373933_0000771 Ga0373933_0000771_4119_6560 689
153 3300044712 Ga0453684_0000056 Ga0453684_0000056_15200_17605 689
154 3300044712 Ga0453684_0019885 Ga0453684_0019885_5368_7812 689
155 3300044712 Ga0453684_0115659 Ga0453684_0115659_656_3076 689
156 3300044712 Ga0453684_0132422 Ga0453684_0132422_179_2626 689
157 3300005343 Ga0070687_100026597 Ga0070687_1000265972 690
158 3300009094 Ga0111539_10010485 Ga0111539_100104856 690
159 3300027907 Ga0207428_10006095 Ga0207428_100060955 690
160 3300050511 nmdc:mga08y16_151_c1 nmdc:mga08y16_151_c1_4653_7022 690
161 3300031691 Ga0316579_10012324 Ga0316579_100123242 691
162 3300031733 Ga0316577_10003885 Ga0316577_100038854 691
163 3300044712 Ga0453684_0101957 Ga0453684_0101957_199_2601 691
164 3300044673 Ga0453683_0032407 Ga0453683_0032407_282_2636 693
165 3300048928 Ga0496125_0008270 Ga0496125_0008270_6618_8981 695
166 3300045051 Ga0451576_0000073 Ga0451576_0000073_111699_114362 699
167 3300005364 Ga0070673_100046071 Ga0070673_1000460713 702
168 3300005329 Ga0070683_100000514 Ga0070683_10000051413 704

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01713

Smr

Smr domain

719

793

0.98

PF00488

MutS_V

MutS domain V

344

527

0.95

PF20297

MSSS

MutS2 and Smr-associated SH3 domain

632

671

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zqe-assembly1.cif.gz_A crystal structure of the smr domain of thermus thermophilus muts2 0.96 628 704
4od6-assembly1.cif.gz_A structure of smr domain of muts2 from deinococcus radiodurans, mn2+ soaked 0.9397 627 704
2zqe-assembly1.cif.gz_A crystal structure of the smr domain of thermus thermophilus muts2 0.9142 628 704
7qv3-assembly1.cif.gz_v bacillus subtilis muts2-collided disome complex (muts2 conf.2; leading 70s) 0.9034 1 548
4od6-assembly1.cif.gz_A structure of smr domain of muts2 from deinococcus radiodurans, mn2+ soaked 0.886 627 704
ID Description Score Start End Superfamily
2zqeA00 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1; 0.96 628 704 3.30.1370.110
af_Q2FZD3_293_599_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9316 293 547 3.40.50.300
2zqeA00 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1; 0.9142 628 704 3.30.1370.110
af_I1JH75_363_688_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9002 301 547 3.40.50.300
af_A0A1D6IIM1_618_765_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8914 293 433 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A357NFQ4-F1-model_v4 Smr domain-containing protein 0.9727 630 704
AF-A0A7V6ZP16-F1-model_v4 Smr domain-containing protein 0.9718 624 704
AF-A0A3M1RCA3-F1-model_v4 Endonuclease MutS2 0.9695 626 704 GO:0004519
AF-A0A357NFQ4-F1-model_v4 Smr domain-containing protein 0.9602 630 704
AF-A0A7X4JW49-F1-model_v4 Endonuclease MutS2 0.9582 4 490 GO:0005524
GO:0006298
GO:0030983
GO:0140664

Feature Viewer

pLDDT pTM Quality
84.12 0.69 Medium
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Predicted Structure (AlphaFold2)

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