F252668
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 168 | 128 | 168 | 360 |
Family's Representative Sequence
| Representative Sequence | 3300013297|Ga0157378_10004098|Ga0157378_1000409811 |
| Length | 397 |
| Sequence | LWRYARQSSTTPLSVFPDRPGVPDAHPTQEEASMTQPTLEAARELSEWRPPLGVLSVFLGFDPADRGGAWRTQLRNGLDSILETQQEAEHDRRVALRATAKRLTERFDDGDLRPPPRGEVGFVEVSEKEGTEHWFGTAVAPAAGACVEFGADPVVAPLLDICGRGGARGVALLSSERVRLLRCAEGALEDLEDWELSVTMLDWRERKSQSTNNPARGQGVSSSGHDHFGERLDHNRQRFLTECGGLVARRLEGNGMAELIVFGPGKDVESFKSGFGSPQAILTVGGDQDLISVPTGKVGELVSEVVGRLDEERDRAVVERALGEAKGGSRGAAGLQEVKEALGEGRVDHLVFDGAIGQEGESLIRAAMSSSARITVVHDKLAEPLSEADGVAALLRY |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 2 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 3 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 6 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 11 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 17 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 19 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 22 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 23 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 24 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 25 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 26 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 27 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 41 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 42 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 65 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 66 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 67 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 68 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 82 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 83 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 84 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 85 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 86 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 87 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 88 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 89 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 90 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 91 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 92 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 93 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 94 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 95 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 96 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 97 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 98 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 99 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 100 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 101 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 102 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 103 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 104 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 105 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 106 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 107 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 108 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 109 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 111 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 112 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 113 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 114 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 115 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 128 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.81 |
| Metatranscriptomes | 1.19 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.6 |
| Nodule | 0 |
| Rhizoplane | 9.52 |
| Rhizosphere | 80.36 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 9.52 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH2_10194639 | 3300003320 | Bacteria | 2119 |
| 2 | Ga0070683_100000855 | 3300005329 | Bacteria | 22514 |
| 3 | Ga0070683_100010013 | 3300005329 | Bacteria | 8131 |
| 4 | Ga0070666_10009109 | 3300005335 | Bacteria | 6189 |
| 5 | Ga0070666_10011893 | 3300005335 | Bacteria | 5473 |
| 6 | Ga0070682_100000026 | 3300005337 | Bacteria | 191388 |
| 7 | Ga0068868_100050144 | 3300005338 | Bacteria | 3277 |
| 8 | Ga0070661_100000004 | 3300005344 | Bacteria | 243876 |
| 9 | Ga0070692_10031031 | 3300005345 | Bacteria | 2676 |
| 10 | Ga0070668_100031136 | 3300005347 | Bacteria | 4059 |
| 11 | Ga0070675_100000078 | 3300005354 | Bacteria | 56469 |
| 12 | Ga0070688_100000113 | 3300005365 | Bacteria | 42091 |
| 13 | Ga0070688_100000271 | 3300005365 | Bacteria | 26844 |
| 14 | Ga0070667_100023457 | 3300005367 | Bacteria | 5119 |
| 15 | Ga0070714_100022870 | 3300005435 | Bacteria | 5130 |
| 16 | Ga0070713_100000005 | 3300005436 | Bacteria | 201526 |
| 17 | Ga0070663_100074004 | 3300005455 | Bacteria | 2486 |
| 18 | Ga0070678_100003265 | 3300005456 | Bacteria | 9010 |
| 19 | Ga0070685_10000012 | 3300005466 | Bacteria | 128823 |
| 20 | Ga0070685_10000627 | 3300005466 | Bacteria | 19323 |
| 21 | Ga0070679_100002446 | 3300005530 | Bacteria | 16834 |
| 22 | Ga0070684_100051102 | 3300005535 | Bacteria | 3591 |
| 23 | Ga0070665_100000682 | 3300005548 | Bacteria | 45471 |
| 24 | Ga0070665_100034659 | 3300005548 | Bacteria | 5077 |
| 25 | Ga0070665_100144008 | 3300005548 | Bacteria | 2386 |
| 26 | Ga0070664_100023827 | 3300005564 | Bacteria | 5056 |
| 27 | Ga0068854_100000062 | 3300005578 | Bacteria | 78159 |
| 28 | Ga0068856_100001736 | 3300005614 | Bacteria | 22788 |
| 29 | Ga0068856_100004990 | 3300005614 | Bacteria | 13143 |
| 30 | Ga0068852_100000022 | 3300005616 | Bacteria | 125196 |
| 31 | Ga0068852_100017046 | 3300005616 | Bacteria | 5689 |
| 32 | Ga0068851_10000933 | 3300005834 | Bacteria | 12643 |
| 33 | Ga0068851_10007466 | 3300005834 | Bacteria | 5022 |
| 34 | Ga0070712_100009064 | 3300006175 | Bacteria | 6266 |
| 35 | Ga0068865_100000061 | 3300006881 | Bacteria | 57211 |
| 36 | Ga0105245_10000023 | 3300009098 | Bacteria | 180844 |
| 37 | Ga0105245_10002542 | 3300009098 | Bacteria | 16442 |
| 38 | Ga0105243_10004459 | 3300009148 | Bacteria | 11067 |
| 39 | Ga0105248_10000245 | 3300009177 | Bacteria | 62951 |
| 40 | Ga0105237_10357332 | 3300009545 | Bacteria | 1465 |
| 41 | Ga0105239_10020042 | 3300010375 | Bacteria | 7379 |
| 42 | Ga0157371_10003324 | 3300013102 | Bacteria | 14691 |
| 43 | Ga0157370_10038457 | 3300013104 | Bacteria | 4627 |
| 44 | Ga0157370_10083790 | 3300013104 | Bacteria | 2997 |
| 45 | Ga0157369_10000014 | 3300013105 | Bacteria | 266411 |
| 46 | Ga0157378_10004098 | 3300013297 | Bacteria | 12872 |
| 47 | Ga0157378_10008013 | 3300013297 | Bacteria | 9222 |
| 48 | Ga0157372_10001763 | 3300013307 | Bacteria | 23465 |
| 49 | Ga0163163_10263780 | 3300014325 | Bacteria | 1773 |
| 50 | Ga0157380_10000007 | 3300014326 | Bacteria | 157634 |
| 51 | Ga0157379_10350550 | 3300014968 | Bacteria | 1351 |
| 52 | Ga0206353_10937207 | 3300020082 | Bacteria | 3867 |
| 53 | Ga0224712_10003283 | 3300022467 | Bacteria | 4171 |
| 54 | Ga0207656_10000111 | 3300025321 | Bacteria | 31159 |
| 55 | Ga0207656_10005209 | 3300025321 | Bacteria | 4575 |
| 56 | Ga0207693_10000955 | 3300025915 | Bacteria | 25933 |
| 57 | Ga0207649_10000003 | 3300025920 | Bacteria | 388908 |
| 58 | Ga0207652_10000307 | 3300025921 | Bacteria | 50351 |
| 59 | Ga0207659_10000018 | 3300025926 | Bacteria | 156920 |
| 60 | Ga0207687_10000015 | 3300025927 | Bacteria | 261701 |
| 61 | Ga0207687_10002068 | 3300025927 | Bacteria | 13737 |
| 62 | Ga0207700_10000003 | 3300025928 | Bacteria | 500797 |
| 63 | Ga0207664_10014785 | 3300025929 | Bacteria | 5650 |
| 64 | Ga0207709_10002037 | 3300025935 | Bacteria | 13096 |
| 65 | Ga0207704_10000026 | 3300025938 | Bacteria | 123892 |
| 66 | Ga0207711_10000192 | 3300025941 | Bacteria | 65599 |
| 67 | Ga0207661_10000805 | 3300025944 | Bacteria | 20473 |
| 68 | Ga0207661_10002070 | 3300025944 | Bacteria | 13792 |
| 69 | Ga0207679_10015248 | 3300025945 | Bacteria | 5071 |
| 70 | Ga0207668_10024777 | 3300025972 | Bacteria | 3876 |
| 71 | Ga0207640_10000074 | 3300025981 | Bacteria | 78164 |
| 72 | Ga0207658_10003736 | 3300025986 | Bacteria | 10720 |
| 73 | Ga0207677_10034256 | 3300026023 | Bacteria | 3287 |
| 74 | Ga0207678_10003682 | 3300026067 | Bacteria | 13779 |
| 75 | Ga0207702_10000337 | 3300026078 | Bacteria | 53931 |
| 76 | Ga0207702_10009140 | 3300026078 | Bacteria | 8339 |
| 77 | Ga0207683_10004476 | 3300026121 | Bacteria | 12064 |
| 78 | Ga0207698_10000043 | 3300026142 | Bacteria | 96553 |
| 79 | Ga0268266_10000247 | 3300028379 | Bacteria | 91489 |
| 80 | Ga0268266_10006805 | 3300028379 | Bacteria | 10414 |
| 81 | Ga0307415_100031850 | 3300032126 | Bacteria | 3403 |
| 82 | Ga0466957_0049864 | 3300044842 | Bacteria | 2546 |
| 83 | Ga0466958_0140900 | 3300045836 | Bacteria | 1518 |
| 84 | Ga0466967_0000002 | 3300045976 | Bacteria | 219994 |
| 85 | Ga0495629_0000025 | 3300046459 | Bacteria | 135624 |
| 86 | Ga0495641_0007218 | 3300046461 | Bacteria | 6994 |
| 87 | Ga0495606_0000017 | 3300046507 | Bacteria | 284549 |
| 88 | Ga0495608_0000035 | 3300046511 | Bacteria | 133011 |
| 89 | Ga0495630_0000034 | 3300046517 | Bacteria | 126055 |
| 90 | Ga0495588_0000073 | 3300046674 | Bacteria | 219005 |
| 91 | Ga0495657_0000026 | 3300046675 | Bacteria | 133011 |
| 92 | Ga0495647_0000079 | 3300046681 | Bacteria | 23665 |
| 93 | Ga0495613_0000027 | 3300046689 | Bacteria | 146674 |
| 94 | Ga0495624_0000220 | 3300046690 | Bacteria | 44376 |
| 95 | Ga0495604_0000293 | 3300047317 | Bacteria | 44767 |
| 96 | Ga0495675_0000015 | 3300047444 | Bacteria | 133004 |
| 97 | Ga0495593_0009544 | 3300047673 | Bacteria | 5631 |
| 98 | Ga0496102_0013229 | 3300048905 | Bacteria | 7142 |
| 99 | Ga0496102_0157478 | 3300048905 | Bacteria | 2135 |
| 100 | Ga0496103_0052782 | 3300048906 | Bacteria | 2518 |
| 101 | Ga0496104_0035975 | 3300048907 | Bacteria | 4626 |
| 102 | Ga0496105_0007040 | 3300048908 | Bacteria | 8666 |
| 103 | Ga0496107_0155711 | 3300048910 | Bacteria | 1692 |
| 104 | Ga0496108_0000005 | 3300048911 | Bacteria | 535059 |
| 105 | Ga0496108_0020830 | 3300048911 | Bacteria | 5392 |
| 106 | Ga0496109_0000002 | 3300048912 | Bacteria | 443393 |
| 107 | Ga0496109_0000066 | 3300048912 | Bacteria | 112004 |
| 108 | Ga0496109_0121399 | 3300048912 | Bacteria | 2435 |
| 109 | Ga0496110_0000235 | 3300048913 | Bacteria | 35772 |
| 110 | Ga0496111_0000011 | 3300048914 | Bacteria | 88409 |
| 111 | Ga0496112_0041734 | 3300048915 | Bacteria | 4489 |
| 112 | Ga0496113_0000001 | 3300048916 | Bacteria | 224977 |
| 113 | Ga0496114_0231895 | 3300048917 | Unclassified | 1622 |
| 114 | Ga0496116_0006122 | 3300048919 | Bacteria | 11005 |
| 115 | Ga0496117_0002533 | 3300048920 | Bacteria | 22847 |
| 116 | Ga0496118_0004985 | 3300048921 | Bacteria | 15350 |
| 117 | Ga0496118_0063089 | 3300048921 | Bacteria | 2729 |
| 118 | Ga0496119_0005540 | 3300048922 | Bacteria | 12028 |
| 119 | Ga0496119_0008917 | 3300048922 | Bacteria | 8718 |
| 120 | Ga0496119_0029494 | 3300048922 | Bacteria | 3719 |
| 121 | Ga0496120_0007097 | 3300048923 | Bacteria | 8406 |
| 122 | Ga0496120_0067992 | 3300048923 | Bacteria | 1966 |
| 123 | Ga0496121_0021772 | 3300048924 | Bacteria | 6261 |
| 124 | Ga0496121_0053990 | 3300048924 | Bacteria | 3362 |
| 125 | Ga0496124_0092536 | 3300048927 | Bacteria | 2463 |
| 126 | Ga0496125_0014994 | 3300048928 | Bacteria | 7526 |
| 127 | Ga0496125_0022374 | 3300048928 | Bacteria | 5872 |
| 128 | Ga0496126_0068214 | 3300048929 | Bacteria | 3176 |
| 129 | Ga0501031_0003987 | 3300049568 | Bacteria | 9520 |
| 130 | Ga0501032_0005420 | 3300049569 | Bacteria | 9481 |
| 131 | Ga0501033_0006145 | 3300049570 | Bacteria | 9417 |
| 132 | Ga0501034_0010724 | 3300049571 | Bacteria | 9516 |
| 133 | Ga0501034_0033542 | 3300049571 | Bacteria | 5207 |
| 134 | Ga0501036_0006622 | 3300049572 | Bacteria | 9414 |
| 135 | Ga0501037_0005623 | 3300049573 | Bacteria | 9137 |
| 136 | Ga0501038_0008864 | 3300049574 | Bacteria | 9231 |
| 137 | Ga0501043_0001246 | 3300049579 | Bacteria | 22436 |
| 138 | Ga0501046_0020369 | 3300049580 | Bacteria | 5487 |
| 139 | Ga0501047_0000689 | 3300049581 | Bacteria | 35263 |
| 140 | Ga0501047_0060132 | 3300049581 | Bacteria | 3667 |
| 141 | Ga0501047_0094747 | 3300049581 | Bacteria | 2864 |
| 142 | Ga0501048_0000890 | 3300049582 | Bacteria | 22096 |
| 143 | Ga0501068_0039692 | 3300049584 | Bacteria | 2823 |
| 144 | Ga0501069_0002896 | 3300049585 | Bacteria | 8811 |
| 145 | Ga0501069_0012468 | 3300049585 | Bacteria | 4520 |
| 146 | Ga0501070_0001442 | 3300049586 | Bacteria | 21250 |
| 147 | Ga0501070_0032096 | 3300049586 | Bacteria | 4396 |
| 148 | Ga0501070_0067488 | 3300049586 | Bacteria | 2962 |
| 149 | Ga0501071_0022093 | 3300049587 | Bacteria | 4434 |
| 150 | Ga0501073_0011757 | 3300049589 | Bacteria | 6391 |
| 151 | Ga0501074_0007958 | 3300049590 | Bacteria | 7680 |
| 152 | Ga0501074_0024692 | 3300049590 | Bacteria | 4367 |
| 153 | Ga0501074_0168765 | 3300049590 | Bacteria | 1562 |
| 154 | Ga0501079_0021694 | 3300049741 | Bacteria | 4915 |
| 155 | Ga0501080_0023615 | 3300049742 | Bacteria | 5697 |
| 156 | Ga0501080_0078011 | 3300049742 | Bacteria | 3081 |
| 157 | Ga0501083_0005581 | 3300049744 | Bacteria | 8907 |
| 158 | Ga0501083_0039796 | 3300049744 | Bacteria | 3192 |
| 159 | Ga0501083_0102815 | 3300049744 | Bacteria | 1883 |
| 160 | Ga0501035_0009966 | 3300049822 | Bacteria | 8819 |
| 161 | Ga0501044_0012041 | 3300049823 | Bacteria | 9367 |
| 162 | Ga0501044_0031847 | 3300049823 | Bacteria | 5546 |
| 163 | Ga0495612_0001491 | 3300053078 | Bacteria | 9648 |
| 164 | Ga0495595_0000017 | 3300053084 | Bacteria | 133011 |
| 165 | Ga0495619_0000054 | 3300053085 | Bacteria | 97928 |
| 166 | Ga0495619_0000101 | 3300053085 | Bacteria | 64377 |
| 167 | Ga0500568_0048411 | 3300053139 | Unclassified | 1681 |
| 168 | Ga0501082_0023846 | 3300060353 | Bacteria | 5276 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300014968 | Ga0157379_10350550 | Ga0157379_103505502 | 319 |
| 2 | 3300005345 | Ga0070692_10031031 | Ga0070692_100310313 | 333 |
| 3 | 3300048922 | Ga0496119_0029494 | Ga0496119_0029494_1893_2975 | 336 |
| 4 | 3300048923 | Ga0496120_0007097 | Ga0496120_0007097_5264_6346 | 336 |
| 5 | 3300048924 | Ga0496121_0021772 | Ga0496121_0021772_1197_2279 | 336 |
| 6 | 3300005456 | Ga0070678_100003265 | Ga0070678_1000032659 | 337 |
| 7 | 3300005548 | Ga0070665_100144008 | Ga0070665_1001440083 | 337 |
| 8 | 3300013104 | Ga0157370_10038457 | Ga0157370_100384573 | 337 |
| 9 | 3300026121 | Ga0207683_10004476 | Ga0207683_1000447610 | 337 |
| 10 | 3300046507 | Ga0495606_0000017 | Ga0495606_0000017_197588_198682 | 337 |
| 11 | 3300048921 | Ga0496118_0063089 | Ga0496118_0063089_1386_2468 | 337 |
| 12 | 3300048928 | Ga0496125_0022374 | Ga0496125_0022374_4345_5427 | 337 |
| 13 | 3300053139 | Ga0500568_0048411 | Ga0500568_0048411_506_1558 | 340 |
| 14 | 3300006881 | Ga0068865_100000061 | Ga0068865_1000000615 | 342 |
| 15 | 3300025938 | Ga0207704_10000026 | Ga0207704_100000263 | 342 |
| 16 | 3300005344 | Ga0070661_100000004 | Ga0070661_10000000499 | 347 |
| 17 | 3300005347 | Ga0070668_100031136 | Ga0070668_1000311363 | 347 |
| 18 | 3300005365 | Ga0070688_100000113 | Ga0070688_10000011311 | 347 |
| 19 | 3300005466 | Ga0070685_10000627 | Ga0070685_1000062717 | 347 |
| 20 | 3300009148 | Ga0105243_10004459 | Ga0105243_1000445910 | 347 |
| 21 | 3300025920 | Ga0207649_10000003 | Ga0207649_10000003160 | 347 |
| 22 | 3300025935 | Ga0207709_10002037 | Ga0207709_1000203712 | 347 |
| 23 | 3300025972 | Ga0207668_10024777 | Ga0207668_100247773 | 347 |
| 24 | 3300049590 | Ga0501074_0024692 | Ga0501074_0024692_510_1598 | 347 |
| 25 | 3300005578 | Ga0068854_100000062 | Ga0068854_10000006265 | 352 |
| 26 | 3300025981 | Ga0207640_10000074 | Ga0207640_1000007464 | 352 |
| 27 | 3300048911 | Ga0496108_0000005 | Ga0496108_0000005_242316_243410 | 352 |
| 28 | 3300048912 | Ga0496109_0000002 | Ga0496109_0000002_291682_292776 | 352 |
| 29 | 3300048913 | Ga0496110_0000235 | Ga0496110_0000235_26828_27889 | 353 |
| 30 | 3300048914 | Ga0496111_0000011 | Ga0496111_0000011_44581_45642 | 353 |
| 31 | 3300048919 | Ga0496116_0006122 | Ga0496116_0006122_6298_7392 | 357 |
| 32 | 3300048922 | Ga0496119_0005540 | Ga0496119_0005540_3393_4487 | 357 |
| 33 | 3300048905 | Ga0496102_0013229 | Ga0496102_0013229_4858_5940 | 360 |
| 34 | 3300048905 | Ga0496102_0157478 | Ga0496102_0157478_886_1971 | 360 |
| 35 | 3300048906 | Ga0496103_0052782 | Ga0496103_0052782_1287_2372 | 360 |
| 36 | 3300048920 | Ga0496117_0002533 | Ga0496117_0002533_17250_18332 | 360 |
| 37 | 3300048921 | Ga0496118_0004985 | Ga0496118_0004985_2755_3837 | 360 |
| 38 | 3300048924 | Ga0496121_0053990 | Ga0496121_0053990_1455_2537 | 360 |
| 39 | 3300005335 | Ga0070666_10011893 | Ga0070666_100118937 | 361 |
| 40 | 3300005367 | Ga0070667_100023457 | Ga0070667_1000234572 | 361 |
| 41 | 3300005548 | Ga0070665_100034659 | Ga0070665_1000346596 | 361 |
| 42 | 3300009545 | Ga0105237_10357332 | Ga0105237_103573321 | 361 |
| 43 | 3300014325 | Ga0163163_10263780 | Ga0163163_102637802 | 361 |
| 44 | 3300014326 | Ga0157380_10000007 | Ga0157380_10000007142 | 361 |
| 45 | 3300025986 | Ga0207658_10003736 | Ga0207658_100037367 | 361 |
| 46 | 3300028379 | Ga0268266_10000247 | Ga0268266_1000024781 | 361 |
| 47 | 3300048907 | Ga0496104_0035975 | Ga0496104_0035975_2440_3525 | 361 |
| 48 | 3300048908 | Ga0496105_0007040 | Ga0496105_0007040_2371_3456 | 361 |
| 49 | 3300048910 | Ga0496107_0155711 | Ga0496107_0155711_363_1448 | 361 |
| 50 | 3300048912 | Ga0496109_0121399 | Ga0496109_0121399_902_1987 | 361 |
| 51 | 3300048922 | Ga0496119_0008917 | Ga0496119_0008917_1999_3084 | 361 |
| 52 | 3300048923 | Ga0496120_0067992 | Ga0496120_0067992_531_1616 | 361 |
| 53 | 3300048928 | Ga0496125_0014994 | Ga0496125_0014994_2184_3269 | 361 |
| 54 | 3300048929 | Ga0496126_0068214 | Ga0496126_0068214_275_1363 | 361 |
| 55 | 3300049568 | Ga0501031_0003987 | Ga0501031_0003987_4085_5173 | 361 |
| 56 | 3300049569 | Ga0501032_0005420 | Ga0501032_0005420_4071_5159 | 361 |
| 57 | 3300049570 | Ga0501033_0006145 | Ga0501033_0006145_4345_5433 | 361 |
| 58 | 3300049571 | Ga0501034_0010724 | Ga0501034_0010724_4091_5179 | 361 |
| 59 | 3300049571 | Ga0501034_0033542 | Ga0501034_0033542_1263_2351 | 361 |
| 60 | 3300049572 | Ga0501036_0006622 | Ga0501036_0006622_4328_5416 | 361 |
| 61 | 3300049573 | Ga0501037_0005623 | Ga0501037_0005623_3962_5050 | 361 |
| 62 | 3300049574 | Ga0501038_0008864 | Ga0501038_0008864_4016_5104 | 361 |
| 63 | 3300049579 | Ga0501043_0001246 | Ga0501043_0001246_4075_5163 | 361 |
| 64 | 3300049580 | Ga0501046_0020369 | Ga0501046_0020369_4313_5401 | 361 |
| 65 | 3300049581 | Ga0501047_0000689 | Ga0501047_0000689_30096_31184 | 361 |
| 66 | 3300049582 | Ga0501048_0000890 | Ga0501048_0000890_16935_18023 | 361 |
| 67 | 3300049584 | Ga0501068_0039692 | Ga0501068_0039692_1715_2803 | 361 |
| 68 | 3300049585 | Ga0501069_0012468 | Ga0501069_0012468_2997_4085 | 361 |
| 69 | 3300049586 | Ga0501070_0001442 | Ga0501070_0001442_15807_16895 | 361 |
| 70 | 3300049587 | Ga0501071_0022093 | Ga0501071_0022093_909_1997 | 361 |
| 71 | 3300049589 | Ga0501073_0011757 | Ga0501073_0011757_1316_2404 | 361 |
| 72 | 3300049590 | Ga0501074_0007958 | Ga0501074_0007958_3156_4244 | 361 |
| 73 | 3300049741 | Ga0501079_0021694 | Ga0501079_0021694_935_2023 | 361 |
| 74 | 3300049742 | Ga0501080_0023615 | Ga0501080_0023615_4035_5123 | 361 |
| 75 | 3300049744 | Ga0501083_0005581 | Ga0501083_0005581_3747_4835 | 361 |
| 76 | 3300049822 | Ga0501035_0009966 | Ga0501035_0009966_4083_5171 | 361 |
| 77 | 3300049823 | Ga0501044_0012041 | Ga0501044_0012041_4290_5378 | 361 |
| 78 | 3300060353 | Ga0501082_0023846 | Ga0501082_0023846_74_1162 | 361 |
| 79 | 3300005455 | Ga0070663_100074004 | Ga0070663_1000740041 | 362 |
| 80 | 3300005530 | Ga0070679_100002446 | Ga0070679_1000024466 | 362 |
| 81 | 3300025921 | Ga0207652_10000307 | Ga0207652_1000030741 | 362 |
| 82 | 3300026067 | Ga0207678_10003682 | Ga0207678_100036821 | 362 |
| 83 | 3300049581 | Ga0501047_0060132 | Ga0501047_0060132_1160_2248 | 362 |
| 84 | 3300049585 | Ga0501069_0002896 | Ga0501069_0002896_3651_4739 | 362 |
| 85 | 3300049586 | Ga0501070_0067488 | Ga0501070_0067488_889_1977 | 362 |
| 86 | 3300049590 | Ga0501074_0168765 | Ga0501074_0168765_151_1239 | 362 |
| 87 | 3300049742 | Ga0501080_0078011 | Ga0501080_0078011_165_1253 | 362 |
| 88 | 3300049744 | Ga0501083_0039796 | Ga0501083_0039796_1347_2435 | 362 |
| 89 | 3300049744 | Ga0501083_0102815 | Ga0501083_0102815_780_1868 | 362 |
| 90 | 3300049823 | Ga0501044_0031847 | Ga0501044_0031847_1509_2597 | 362 |
| 91 | 3300005335 | Ga0070666_10009109 | Ga0070666_100091097 | 363 |
| 92 | 3300005548 | Ga0070665_100000682 | Ga0070665_10000068212 | 363 |
| 93 | 3300005616 | Ga0068852_100017046 | Ga0068852_1000170463 | 363 |
| 94 | 3300028379 | Ga0268266_10006805 | Ga0268266_1000680511 | 363 |
| 95 | 3300046459 | Ga0495629_0000025 | Ga0495629_0000025_59681_60772 | 363 |
| 96 | 3300048917 | Ga0496114_0231895 | Ga0496114_0231895_467_1558 | 363 |
| 97 | 3300003320 | rootH2_10194639 | rootH2_101946392 | 364 |
| 98 | 3300005329 | Ga0070683_100000855 | Ga0070683_1000008559 | 364 |
| 99 | 3300005329 | Ga0070683_100010013 | Ga0070683_10001001310 | 364 |
| 100 | 3300005337 | Ga0070682_100000026 | Ga0070682_10000002610 | 364 |
| 101 | 3300005338 | Ga0068868_100050144 | Ga0068868_1000501441 | 364 |
| 102 | 3300005354 | Ga0070675_100000078 | Ga0070675_10000007863 | 364 |
| 103 | 3300005365 | Ga0070688_100000271 | Ga0070688_10000027123 | 364 |
| 104 | 3300005435 | Ga0070714_100022870 | Ga0070714_1000228701 | 364 |
| 105 | 3300005436 | Ga0070713_100000005 | Ga0070713_100000005128 | 364 |
| 106 | 3300005466 | Ga0070685_10000012 | Ga0070685_10000012107 | 364 |
| 107 | 3300005535 | Ga0070684_100051102 | Ga0070684_1000511023 | 364 |
| 108 | 3300005564 | Ga0070664_100023827 | Ga0070664_1000238274 | 364 |
| 109 | 3300005614 | Ga0068856_100001736 | Ga0068856_10000173618 | 364 |
| 110 | 3300005614 | Ga0068856_100004990 | Ga0068856_1000049904 | 364 |
| 111 | 3300005616 | Ga0068852_100000022 | Ga0068852_10000002259 | 364 |
| 112 | 3300005834 | Ga0068851_10000933 | Ga0068851_1000093315 | 364 |
| 113 | 3300005834 | Ga0068851_10007466 | Ga0068851_100074665 | 364 |
| 114 | 3300006175 | Ga0070712_100009064 | Ga0070712_1000090646 | 364 |
| 115 | 3300009098 | Ga0105245_10000023 | Ga0105245_1000002380 | 364 |
| 116 | 3300009098 | Ga0105245_10002542 | Ga0105245_1000254210 | 364 |
| 117 | 3300009177 | Ga0105248_10000245 | Ga0105248_100002458 | 364 |
| 118 | 3300010375 | Ga0105239_10020042 | Ga0105239_1002004210 | 364 |
| 119 | 3300013102 | Ga0157371_10003324 | Ga0157371_1000332413 | 364 |
| 120 | 3300013104 | Ga0157370_10083790 | Ga0157370_100837902 | 364 |
| 121 | 3300013105 | Ga0157369_10000014 | Ga0157369_10000014278 | 364 |
| 122 | 3300013297 | Ga0157378_10004098 | Ga0157378_1000409811 | 364 |
| 123 | 3300013297 | Ga0157378_10008013 | Ga0157378_100080136 | 364 |
| 124 | 3300013307 | Ga0157372_10001763 | Ga0157372_1000176312 | 364 |
| 125 | 3300020082 | Ga0206353_10937207 | Ga0206353_109372075 | 364 |
| 126 | 3300022467 | Ga0224712_10003283 | Ga0224712_100032831 | 364 |
| 127 | 3300025321 | Ga0207656_10000111 | Ga0207656_1000011131 | 364 |
| 128 | 3300025321 | Ga0207656_10005209 | Ga0207656_100052091 | 364 |
| 129 | 3300025915 | Ga0207693_10000955 | Ga0207693_100009555 | 364 |
| 130 | 3300025926 | Ga0207659_10000018 | Ga0207659_1000001875 | 364 |
| 131 | 3300025927 | Ga0207687_10000015 | Ga0207687_10000015102 | 364 |
| 132 | 3300025927 | Ga0207687_10002068 | Ga0207687_1000206811 | 364 |
| 133 | 3300025928 | Ga0207700_10000003 | Ga0207700_10000003317 | 364 |
| 134 | 3300025929 | Ga0207664_10014785 | Ga0207664_100147858 | 364 |
| 135 | 3300025941 | Ga0207711_10000192 | Ga0207711_100001928 | 364 |
| 136 | 3300025944 | Ga0207661_10000805 | Ga0207661_100008059 | 364 |
| 137 | 3300025944 | Ga0207661_10002070 | Ga0207661_1000207010 | 364 |
| 138 | 3300025945 | Ga0207679_10015248 | Ga0207679_100152484 | 364 |
| 139 | 3300026023 | Ga0207677_10034256 | Ga0207677_100342566 | 364 |
| 140 | 3300026078 | Ga0207702_10000337 | Ga0207702_1000033720 | 364 |
| 141 | 3300026078 | Ga0207702_10009140 | Ga0207702_100091409 | 364 |
| 142 | 3300026142 | Ga0207698_10000043 | Ga0207698_1000004364 | 364 |
| 143 | 3300032126 | Ga0307415_100031850 | Ga0307415_1000318505 | 364 |
| 144 | 3300044842 | Ga0466957_0049864 | Ga0466957_0049864_107_1201 | 364 |
| 145 | 3300045836 | Ga0466958_0140900 | Ga0466958_0140900_381_1475 | 364 |
| 146 | 3300045976 | Ga0466967_0000002 | Ga0466967_0000002_199499_200593 | 364 |
| 147 | 3300046461 | Ga0495641_0007218 | Ga0495641_0007218_376_1470 | 364 |
| 148 | 3300046511 | Ga0495608_0000035 | Ga0495608_0000035_108895_109989 | 364 |
| 149 | 3300046517 | Ga0495630_0000034 | Ga0495630_0000034_65047_66141 | 364 |
| 150 | 3300046674 | Ga0495588_0000073 | Ga0495588_0000073_49701_50795 | 364 |
| 151 | 3300046675 | Ga0495657_0000026 | Ga0495657_0000026_23023_24117 | 364 |
| 152 | 3300046681 | Ga0495647_0000079 | Ga0495647_0000079_9288_10382 | 364 |
| 153 | 3300046689 | Ga0495613_0000027 | Ga0495613_0000027_2459_3553 | 364 |
| 154 | 3300046690 | Ga0495624_0000220 | Ga0495624_0000220_4558_5652 | 364 |
| 155 | 3300047317 | Ga0495604_0000293 | Ga0495604_0000293_2274_3368 | 364 |
| 156 | 3300047444 | Ga0495675_0000015 | Ga0495675_0000015_23016_24110 | 364 |
| 157 | 3300047673 | Ga0495593_0009544 | Ga0495593_0009544_101_1195 | 364 |
| 158 | 3300048911 | Ga0496108_0020830 | Ga0496108_0020830_4069_5163 | 364 |
| 159 | 3300048912 | Ga0496109_0000066 | Ga0496109_0000066_89322_90416 | 364 |
| 160 | 3300048915 | Ga0496112_0041734 | Ga0496112_0041734_47_1141 | 364 |
| 161 | 3300048916 | Ga0496113_0000001 | Ga0496113_0000001_94245_95339 | 364 |
| 162 | 3300048927 | Ga0496124_0092536 | Ga0496124_0092536_867_1961 | 364 |
| 163 | 3300049581 | Ga0501047_0094747 | Ga0501047_0094747_199_1293 | 364 |
| 164 | 3300049586 | Ga0501070_0032096 | Ga0501070_0032096_3243_4337 | 364 |
| 165 | 3300053078 | Ga0495612_0001491 | Ga0495612_0001491_454_1548 | 364 |
| 166 | 3300053084 | Ga0495595_0000017 | Ga0495595_0000017_23023_24117 | 364 |
| 167 | 3300053085 | Ga0495619_0000054 | Ga0495619_0000054_44832_45926 | 364 |
| 168 | 3300053085 | Ga0495619_0000101 | Ga0495619_0000101_23023_24117 | 364 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1w41-assembly1.cif.gz_A | t. celer l30e e90a variant | 0.821 | 298 | 362 |
| 5xy3-assembly1.cif.gz_G | large subunit of trichomonas vaginalis ribosome | 0.7914 | 298 | 363 |
| 7mq8-assembly1.cif.gz_LA | cryo-em structure of the human ssu processome, state pre-a1 | 0.7826 | 283 | 361 |
| 7qiz-assembly1.cif.gz_e | specific features and methylation sites of a plant 80s ribosome | 0.7798 | 298 | 363 |
| 6gz4-assembly1.cif.gz_BM | trna translocation by the eukaryotic 80s ribosome and the impact of gtp hydrolysis, translocation-intermediate-post-2 (ti-post-2) | 0.7774 | 283 | 364 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q57638_253_347_3.30.1330.30 | Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;Ribosomal protein L30/S12 | 0.9161 | 278 | 364 | 3.30.1330.30 |
| 2qi2A03 | Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;Ribosomal protein L30/S12 | 0.8974 | 279 | 364 | 3.30.1330.30 |
| af_Q58239_275_421_3.30.1330.30 | Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;Ribosomal protein L30/S12 | 0.8767 | 277 | 364 | 3.30.1330.30 |
| af_I1NAF6_251_358_3.30.1330.30 | Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;Ribosomal protein L30/S12 | 0.86 | 283 | 364 | 3.30.1330.30 |
| 3obyB03 | Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;Ribosomal protein L30/S12 | 0.8589 | 279 | 364 | 3.30.1330.30 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A846NWG9-F1-model_v4 | deleted | 0.9212 | 270 | 364 |
|
| AF-A0A1M3BJ25-F1-model_v4 | eRF1 domain-containing protein | 0.9196 | 1 | 364 |
|
| AF-A0A1M3BJ25-F1-model_v4 | eRF1 domain-containing protein | 0.9171 | 1 | 364 |
|
| AF-A0A7J2ZM64-F1-model_v4 | eRF1 domain-containing protein | 0.8768 | 282 | 364 |
GO:0005737
GO:0032790 GO:0046872 GO:0070481 GO:0070651 GO:0070966 GO:0071025 |
| AF-A0A0B8NYW1-F1-model_v4 | Uncharacterized protein | 0.8385 | 222 | 364 |
|
Predicted Structure (AlphaFold2)
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