F252666

General Info

Members Datasets Scaffolds Average Seq Length
168 112 167 210

Family's Representative Sequence

Representative Sequence 3300013296|Ga0157374_10642517|Ga0157374_106425172
Length 227
Sequence MNMKLLLKGISLAVADFNLVMDVELHRQVTAIFGASGAGKTSLVKALLERMPELHVSISHTTRNKRPTEVAGREYYFVSVPEFERLVAGGQFLEHARVFDNYYGTGRAPVEAQLGQGNDVVLEIDWQGAQQVRRAMPEARTIFVLPPSRRSLEQRLRNRATDSNEVIERRLRDAVGDMTHCREFDYVVVNDDFEHAVGDLMRIVSGKGEDLRAGRPDLEYLLKDLLG

Samples

Sample ID Description Type Environment
1 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
2 2606217733 Pseudomonas aeruginosa NFHH01 Isolate Rhizoplane
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
51 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
70 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
71 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
72 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
73 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
74 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
75 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
76 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
77 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
78 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
81 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
82 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
83 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
84 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
85 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
86 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
87 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
88 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
89 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
90 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
91 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
92 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
93 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
94 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
95 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
96 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
97 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
98 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
99 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
101 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
102 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
103 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
104 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
105 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
106 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
107 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
108 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
109 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
110 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
111 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
112 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.81
Metatranscriptomes 0
Isolates 1.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.52
Nodule 0
Rhizoplane 1.19
Rhizosphere 82.14
Stem 0
Stem Tuber 0
Unclassified 7.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10014453 3300003203 Bacteria 3356
2 rootL2_10277823 3300003322 Bacteria 1461
3 rootH1_10055405 3300003316 Bacteria 1796
4 rootH1_10055405 3300003323 Bacteria 1414
5 Ga0065707_10081898 3300005295 Bacteria 30251
6 Ga0070683_100072987 3300005329 Bacteria 3204
7 Ga0068869_100318518 3300005334 Bacteria 1261
8 Ga0070666_10401626 3300005335 Bacteria 985
9 Ga0070680_100004611 3300005336 Bacteria 10354
10 Ga0070680_100038313 3300005336 Bacteria 3877
11 Ga0070682_100130390 3300005337 Bacteria 1701
12 Ga0070689_100836497 3300005340 Bacteria 811
13 Ga0070671_100014102 3300005355 Bacteria 6452
14 Ga0070667_100013971 3300005367 Bacteria 6636
15 Ga0070714_100007181 3300005435 Bacteria 8644
16 Ga0070713_100620243 3300005436 Bacteria 1028
17 Ga0070710_10101258 3300005437 Bacteria 1716
18 Ga0070711_100654366 3300005439 Bacteria 881
19 Ga0070681_10008807 3300005458 Bacteria 9907
20 Ga0070681_10015425 3300005458 Bacteria 7606
21 Ga0070681_10138552 3300005458 Bacteria 2363
22 Ga0070679_100003138 3300005530 Bacteria 15101
23 Ga0070679_100013311 3300005530 Bacteria 7876
24 Ga0070679_100118432 3300005530 Bacteria 2633
25 Ga0070684_100247451 3300005535 Bacteria 1629
26 Ga0070684_100621749 3300005535 Bacteria 1005
27 Ga0070686_100091630 3300005544 Bacteria 2034
28 Ga0070665_100000792 3300005548 Bacteria 41560
29 Ga0070665_100005320 3300005548 Bacteria 13295
30 Ga0070665_100008027 3300005548 Bacteria 10691
31 Ga0070665_100019379 3300005548 Bacteria 6826
32 Ga0068855_100001541 3300005563 Bacteria 28975
33 Ga0068855_100019264 3300005563 Bacteria 8202
34 Ga0068855_100687185 3300005563 Bacteria 1096
35 Ga0068856_100302252 3300005614 Bacteria 1618
36 Ga0068859_100000489 3300005617 Bacteria 39185
37 Ga0068861_100089366 3300005719 Bacteria 2428
38 Ga0068863_100005011 3300005841 Bacteria 13055
39 Ga0068858_100012267 3300005842 Bacteria 8080
40 Ga0068858_100278571 3300005842 Bacteria 1592
41 Ga0068858_100386244 3300005842 Bacteria 1344
42 Ga0068862_100084655 3300005844 Bacteria 2755
43 Ga0068862_100170192 3300005844 Bacteria 1950
44 Ga0081455_10001645 3300005937 Bacteria 27158
45 Ga0081539_10000007 3300005985 Bacteria 532790
46 Ga0070712_100468330 3300006175 Bacteria 1052
47 Ga0097621_100345354 3300006237 Bacteria 1322
48 Ga0068871_100272769 3300006358 Bacteria 1478
49 Ga0097620_100000489 3300006931 Bacteria 39185
50 Ga0105240_10004535 3300009093 Bacteria 21095
51 Ga0105240_10004818 3300009093 Bacteria 20334
52 Ga0105240_10091500 3300009093 Bacteria 3716
53 Ga0105240_10200134 3300009093 Bacteria 2341
54 Ga0105247_10002948 3300009101 Bacteria 11309
55 Ga0105247_10414727 3300009101 Bacteria 963
56 Ga0105237_10057091 3300009545 Bacteria 3907
57 Ga0105237_10342656 3300009545 Bacteria 1499
58 Ga0105238_10021886 3300009551 Bacteria 6513
59 Ga0105238_10079648 3300009551 Bacteria 3266
60 Ga0105238_10227542 3300009551 Bacteria 1842
61 Ga0105249_10035758 3300009553 Bacteria 4504
62 Ga0105239_10108180 3300010375 Bacteria 3081
63 Ga0105246_11364487 3300011119 Bacteria 660
64 Ga0157369_10039145 3300013105 Bacteria 5182
65 Ga0157374_10598822 3300013296 Bacteria 1112
66 Ga0157374_10642517 3300013296 Bacteria 1073
67 Ga0157378_10159692 3300013297 Bacteria 2107
68 Ga0163163_10562695 3300014325 Bacteria 1203
69 Ga0163163_10564656 3300014325 Bacteria 1201
70 Ga0157379_10029943 3300014968 Bacteria 4841
71 Ga0157379_10098924 3300014968 Bacteria 2618
72 Ga0157376_10245526 3300014969 Bacteria 1670
73 Ga0157376_10351784 3300014969 Bacteria 1410
74 Ga0213874_10006764 3300021377 Bacteria 2726
75 Ga0207692_10081910 3300025898 Bacteria 1728
76 Ga0207707_10002247 3300025912 Bacteria 17460
77 Ga0207707_10004517 3300025912 Bacteria 12232
78 Ga0207707_10160663 3300025912 Bacteria 1965
79 Ga0207707_10432929 3300025912 Bacteria 1126
80 Ga0207695_10005850 3300025913 Bacteria 16152
81 Ga0207695_10012752 3300025913 Bacteria 10062
82 Ga0207695_10021781 3300025913 Bacteria 7301
83 Ga0207695_10069810 3300025913 Bacteria 3594
84 Ga0207671_10024666 3300025914 Bacteria 4517
85 Ga0207671_10402295 3300025914 Bacteria 1089
86 Ga0207660_10029541 3300025917 Bacteria 3762
87 Ga0207660_10196298 3300025917 Bacteria 1574
88 Ga0207652_10002696 3300025921 Bacteria 14897
89 Ga0207652_10810014 3300025921 Bacteria 831
90 Ga0207694_10157986 3300025924 Bacteria 1830
91 Ga0207694_10469208 3300025924 Bacteria 1052
92 Ga0207700_10063817 3300025928 Bacteria 2803
93 Ga0207700_10130540 3300025928 Bacteria 2051
94 Ga0207700_10282126 3300025928 Bacteria 1429
95 Ga0207664_10002278 3300025929 Bacteria 12650
96 Ga0207661_10036495 3300025944 Bacteria 3837
97 Ga0207667_10000918 3300025949 Bacteria 37560
98 Ga0207667_10012264 3300025949 Bacteria 9893
99 Ga0207667_10110084 3300025949 Bacteria 2841
100 Ga0207712_10049986 3300025961 Bacteria 2917
101 Ga0207703_10195800 3300026035 Bacteria 1793
102 Ga0207703_10247832 3300026035 Bacteria 1604
103 Ga0207703_10416164 3300026035 Bacteria 1250
104 Ga0207639_10492450 3300026041 Bacteria 1119
105 Ga0207675_100272480 3300026118 Bacteria 1643
106 Ga0207698_11132321 3300026142 Bacteria 796
107 Ga0268266_10001089 3300028379 Bacteria 34078
108 Ga0268266_10006825 3300028379 Bacteria 10397
109 Ga0268266_10023316 3300028379 Bacteria 5270
110 Ga0268265_10161667 3300028380 Bacteria 1903
111 Ga0268265_10161899 3300028380 Bacteria 1902
112 Ga0265334_10000066 3300028573 Bacteria 77897
113 Ga0265334_10044223 3300028573 Bacteria 1730
114 Ga0307515_10049551 3300028794 Bacteria 6314
115 Ga0265340_10022914 3300031247 Bacteria 3187
116 Ga0265331_10013543 3300031250 Bacteria 4380
117 Ga0265331_10331984 3300031250 Bacteria 681
118 Ga0265327_10000002 3300031251 Bacteria 856593
119 Ga0265327_10020693 3300031251 Bacteria 3997
120 Ga0307509_10325239 3300031507 Bacteria 1272
121 Ga0307509_10326658 3300031507 Bacteria 1268
122 Ga0307509_10481551 3300031507 Bacteria 929
123 Ga0265313_10001820 3300031595 Bacteria 19501
124 Ga0373954_0295880 3300035118 Bacteria 798
125 Ga0373955_0181403 3300035172 Bacteria 1249
126 Ga0373931_0868783 3300035691 Bacteria 605
127 Ga0373925_0636507 3300037068 Bacteria 879
128 Ga0395905_0370470 3300037471 Bacteria 1326
129 Ga0436361_0241431 3300039447 Bacteria 1184
130 Ga0436363_0763361 3300039450 Bacteria 6467
131 Ga0466969_0003086 3300044656 Bacteria 8880
132 Ga0466972_0095293 3300044658 Bacteria 1410
133 Ga0466972_0407366 3300044658 Bacteria 637
134 Ga0466966_0084235 3300044684 Bacteria 1978
135 Ga0466960_0278909 3300044901 Bacteria 936
136 Ga0466959_0002274 3300045049 Bacteria 12248
137 Ga0466959_0010608 3300045049 Bacteria 6596
138 Ga0466958_0279101 3300045836 Bacteria 1071
139 Ga0495580_0068677 3300046472 Bacteria 2478
140 Ga0495583_0048932 3300046506 Bacteria 1938
141 Ga0495628_0360823 3300046516 Bacteria 1067
142 Ga0495632_0040555 3300046519 Bacteria 2344
143 Ga0495586_0176895 3300046535 Bacteria 1207
144 Ga0495587_0028121 3300046536 Bacteria 3422
145 Ga0495669_0189022 3300046684 Bacteria 983
146 Ga0496103_0231884 3300048906 Bacteria 1188
147 Ga0496125_0149809 3300048928 Bacteria 1605
148 Ga0496126_0004615 3300048929 Bacteria 16332
149 Ga0496126_0068552 3300048929 Bacteria 3167
150 Ga0501038_0859469 3300049574 Bacteria 671
151 Ga0501073_0090388 3300049589 Bacteria 2128
152 Ga0500641_0004495 3300053096 Bacteria 4928
153 Ga0500641_0111657 3300053096 Bacteria 1177
154 Ga0500556_0000121 3300053104 Bacteria 67560
155 Ga0500556_0011499 3300053104 Bacteria 2622
156 Ga0500569_030805 3300053109 Bacteria 1504
157 Ga0500593_116447 3300053117 Bacteria 1090
158 Ga0500655_011803 3300053133 Bacteria 1586
159 Ga0500658_0059407 3300053134 Bacteria 1586
160 Ga0500658_0086601 3300053134 Bacteria 1348
161 Ga0500577_0097015 3300053142 Bacteria 1200
162 Ga0500588_0042463 3300053146 Bacteria 1377
163 Ga0500616_0000074 3300053153 Bacteria 222910
164 Ga0500616_0124950 3300053153 Bacteria 1223
165 Ga0500622_0005874 3300053156 Bacteria 7253
166 Ga0500636_0252655 3300053177 Unclassified 898
167 Ga0500611_017096 3300053727 Bacteria 1315

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049574 Ga0501038_0859469 Ga0501038_0859469_133_660 167
2 3300035691 Ga0373931_0868783 Ga0373931_0868783_10_534 171
3 3300037068 Ga0373925_0636507 Ga0373925_0636507_26_586 184
4 3300044658 Ga0466972_0407366 Ga0466972_0407366_17_571 184
5 3300045836 Ga0466958_0279101 Ga0466958_0279101_26_580 184
6 3300046684 Ga0495669_0189022 Ga0495669_0189022_399_953 184
7 3300048906 Ga0496103_0231884 Ga0496103_0231884_622_1176 184
8 3300039447 Ga0436361_0241431 Ga0436361_0241431_20_640 191
9 3300005439 Ga0070711_100654366 Ga0070711_1006543661 194
10 3300028380 Ga0268265_10161899 Ga0268265_101618992 197
11 3300011119 Ga0105246_11364487 Ga0105246_113644871 198
12 3300046519 Ga0495632_0040555 Ga0495632_0040555_1463_2062 199
13 3300053109 Ga0500569_030805 Ga0500569_030805_736_1335 199
14 3300053134 Ga0500658_0086601 Ga0500658_0086601_194_793 199
15 3300053727 Ga0500611_017096 Ga0500611_017096_479_1078 199
16 iso_pu_bacteria 2554235132 2554818441 199
17 iso_pu_bacteria 2606217733 2608385094 199
18 3300005295 Ga0065707_10081898 Ga0065707_1008189810 204
19 3300005437 Ga0070710_10101258 Ga0070710_101012582 204
20 3300005842 Ga0068858_100278571 Ga0068858_1002785713 204
21 3300006175 Ga0070712_100468330 Ga0070712_1004683302 204
22 3300014325 Ga0163163_10564656 Ga0163163_105646562 204
23 3300021377 Ga0213874_10006764 Ga0213874_100067643 204
24 3300025898 Ga0207692_10081910 Ga0207692_100819102 204
25 3300025928 Ga0207700_10282126 Ga0207700_102821262 204
26 3300026035 Ga0207703_10247832 Ga0207703_102478323 204
27 3300031250 Ga0265331_10331984 Ga0265331_103319841 204
28 3300031251 Ga0265327_10000002 Ga0265327_10000002662 204
29 3300031251 Ga0265327_10020693 Ga0265327_100206933 204
30 3300035118 Ga0373954_0295880 Ga0373954_0295880_65_688 204
31 3300039450 Ga0436363_0763361 Ga0436363_0763361_251_877 204
32 3300046472 Ga0495580_0068677 Ga0495580_0068677_1224_1847 204
33 3300046506 Ga0495583_0048932 Ga0495583_0048932_94_708 204
34 3300046516 Ga0495628_0360823 Ga0495628_0360823_429_1052 204
35 3300046536 Ga0495587_0028121 Ga0495587_0028121_1485_2108 204
36 3300046535 Ga0495586_0176895 Ga0495586_0176895_479_1105 206
37 3300049589 Ga0501073_0090388 Ga0501073_0090388_1059_1697 206
38 3300053104 Ga0500556_0000121 Ga0500556_0000121_49218_49838 206
39 3300005329 Ga0070683_100072987 Ga0070683_1000729873 207
40 3300005336 Ga0070680_100004611 Ga0070680_1000046114 207
41 3300005436 Ga0070713_100620243 Ga0070713_1006202432 207
42 3300005530 Ga0070679_100118432 Ga0070679_1001184322 207
43 3300005535 Ga0070684_100247451 Ga0070684_1002474512 207
44 3300009093 Ga0105240_10091500 Ga0105240_100915003 207
45 3300009545 Ga0105237_10342656 Ga0105237_103426562 207
46 3300009551 Ga0105238_10227542 Ga0105238_102275423 207
47 3300013296 Ga0157374_10598822 Ga0157374_105988222 207
48 3300014969 Ga0157376_10351784 Ga0157376_103517843 207
49 3300025913 Ga0207695_10069810 Ga0207695_100698103 207
50 3300025914 Ga0207671_10402295 Ga0207671_104022952 207
51 3300025917 Ga0207660_10196298 Ga0207660_101962982 207
52 3300025924 Ga0207694_10157986 Ga0207694_101579863 207
53 3300025928 Ga0207700_10063817 Ga0207700_100638173 207
54 3300025944 Ga0207661_10036495 Ga0207661_100364953 207
55 3300026041 Ga0207639_10492450 Ga0207639_104924502 207
56 3300028573 Ga0265334_10044223 Ga0265334_100442233 207
57 3300031250 Ga0265331_10013543 Ga0265331_100135433 207
58 3300035172 Ga0373955_0181403 Ga0373955_0181403_206_829 207
59 3300044684 Ga0466966_0084235 Ga0466966_0084235_1244_1870 207
60 3300005340 Ga0070689_100836497 Ga0070689_1008364971 208
61 3300005355 Ga0070671_100014102 Ga0070671_1000141027 208
62 3300005367 Ga0070667_100013971 Ga0070667_1000139715 208
63 3300005435 Ga0070714_100007181 Ga0070714_10000718110 208
64 3300005544 Ga0070686_100091630 Ga0070686_1000916302 208
65 3300005548 Ga0070665_100008027 Ga0070665_1000080277 208
66 3300005617 Ga0068859_100000489 Ga0068859_10000048923 208
67 3300005841 Ga0068863_100005011 Ga0068863_1000050119 208
68 3300005842 Ga0068858_100012267 Ga0068858_1000122677 208
69 3300006931 Ga0097620_100000489 Ga0097620_10000048923 208
70 3300009101 Ga0105247_10002948 Ga0105247_100029488 208
71 3300013297 Ga0157378_10159692 Ga0157378_101596922 208
72 3300014968 Ga0157379_10029943 Ga0157379_100299436 208
73 3300014969 Ga0157376_10245526 Ga0157376_102455262 208
74 3300025929 Ga0207664_10002278 Ga0207664_100022785 208
75 3300028573 Ga0265334_10000066 Ga0265334_1000006662 208
76 3300031595 Ga0265313_10001820 Ga0265313_1000182014 208
77 3300005334 Ga0068869_100318518 Ga0068869_1003185182 209
78 3300025928 Ga0207700_10130540 Ga0207700_101305402 209
79 3300037471 Ga0395905_0370470 Ga0395905_0370470_651_1280 209
80 3300010375 Ga0105239_10108180 Ga0105239_101081803 210
81 3300044656 Ga0466969_0003086 Ga0466969_0003086_6857_7498 210
82 3300045049 Ga0466959_0010608 Ga0466959_0010608_3167_3808 210
83 3300003203 JGI25406J46586_10014453 JGI25406J46586_100144533 211
84 3300003322 rootL2_10277823 rootL2_102778233 211
85 3300003323 rootH1_10055405 rootH1_100554053 211
86 3300005335 Ga0070666_10401626 Ga0070666_104016262 211
87 3300005336 Ga0070680_100038313 Ga0070680_1000383134 211
88 3300005337 Ga0070682_100130390 Ga0070682_1001303902 211
89 3300005458 Ga0070681_10008807 Ga0070681_100088073 211
90 3300005458 Ga0070681_10015425 Ga0070681_100154255 211
91 3300005458 Ga0070681_10138552 Ga0070681_101385521 211
92 3300005530 Ga0070679_100003138 Ga0070679_10000313810 211
93 3300005530 Ga0070679_100013311 Ga0070679_1000133111 211
94 3300005535 Ga0070684_100621749 Ga0070684_1006217491 211
95 3300005548 Ga0070665_100000792 Ga0070665_10000079228 211
96 3300005548 Ga0070665_100005320 Ga0070665_10000532010 211
97 3300005548 Ga0070665_100019379 Ga0070665_1000193793 211
98 3300005563 Ga0068855_100001541 Ga0068855_10000154118 211
99 3300005563 Ga0068855_100019264 Ga0068855_1000192645 211
100 3300005563 Ga0068855_100687185 Ga0068855_1006871852 211
101 3300005614 Ga0068856_100302252 Ga0068856_1003022522 211
102 3300005719 Ga0068861_100089366 Ga0068861_1000893663 211
103 3300005842 Ga0068858_100386244 Ga0068858_1003862442 211
104 3300005844 Ga0068862_100084655 Ga0068862_1000846554 211
105 3300005844 Ga0068862_100170192 Ga0068862_1001701922 211
106 3300005937 Ga0081455_10001645 Ga0081455_100016457 211
107 3300005985 Ga0081539_10000007 Ga0081539_1000000738 211
108 3300006237 Ga0097621_100345354 Ga0097621_1003453542 211
109 3300006358 Ga0068871_100272769 Ga0068871_1002727691 211
110 3300009093 Ga0105240_10004535 Ga0105240_1000453519 211
111 3300009093 Ga0105240_10004818 Ga0105240_100048185 211
112 3300009093 Ga0105240_10200134 Ga0105240_102001344 211
113 3300009101 Ga0105247_10414727 Ga0105247_104147272 211
114 3300009545 Ga0105237_10057091 Ga0105237_100570911 211
115 3300009551 Ga0105238_10021886 Ga0105238_100218864 211
116 3300009551 Ga0105238_10079648 Ga0105238_100796484 211
117 3300009553 Ga0105249_10035758 Ga0105249_100357583 211
118 3300013105 Ga0157369_10039145 Ga0157369_100391453 211
119 3300013296 Ga0157374_10642517 Ga0157374_106425172 211
120 3300014325 Ga0163163_10562695 Ga0163163_105626951 211
121 3300014968 Ga0157379_10098924 Ga0157379_100989242 211
122 3300025912 Ga0207707_10002247 Ga0207707_1000224711 211
123 3300025912 Ga0207707_10004517 Ga0207707_100045175 211
124 3300025912 Ga0207707_10160663 Ga0207707_101606631 211
125 3300025912 Ga0207707_10432929 Ga0207707_104329291 211
126 3300025913 Ga0207695_10005850 Ga0207695_1000585010 211
127 3300025913 Ga0207695_10012752 Ga0207695_100127525 211
128 3300025913 Ga0207695_10021781 Ga0207695_100217813 211
129 3300025914 Ga0207671_10024666 Ga0207671_100246663 211
130 3300025917 Ga0207660_10029541 Ga0207660_100295414 211
131 3300025921 Ga0207652_10002696 Ga0207652_100026968 211
132 3300025921 Ga0207652_10810014 Ga0207652_108100141 211
133 3300025924 Ga0207694_10469208 Ga0207694_104692082 211
134 3300025949 Ga0207667_10000918 Ga0207667_1000091837 211
135 3300025949 Ga0207667_10012264 Ga0207667_100122645 211
136 3300025949 Ga0207667_10110084 Ga0207667_101100842 211
137 3300025961 Ga0207712_10049986 Ga0207712_100499863 211
138 3300026035 Ga0207703_10195800 Ga0207703_101958002 211
139 3300026035 Ga0207703_10416164 Ga0207703_104161641 211
140 3300026118 Ga0207675_100272480 Ga0207675_1002724803 211
141 3300026142 Ga0207698_11132321 Ga0207698_111323211 211
142 3300028379 Ga0268266_10001089 Ga0268266_100010894 211
143 3300028379 Ga0268266_10006825 Ga0268266_100068253 211
144 3300028379 Ga0268266_10023316 Ga0268266_100233163 211
145 3300028380 Ga0268265_10161667 Ga0268265_101616674 211
146 3300028794 Ga0307515_10049551 Ga0307515_100495516 211
147 3300031247 Ga0265340_10022914 Ga0265340_100229142 211
148 3300031507 Ga0307509_10325239 Ga0307509_103252391 211
149 3300031507 Ga0307509_10326658 Ga0307509_103266582 211
150 3300031507 Ga0307509_10481551 Ga0307509_104815511 211
151 3300044658 Ga0466972_0095293 Ga0466972_0095293_616_1260 211
152 3300044901 Ga0466960_0278909 Ga0466960_0278909_40_675 211
153 3300045049 Ga0466959_0002274 Ga0466959_0002274_4481_5125 211
154 3300048928 Ga0496125_0149809 Ga0496125_0149809_856_1500 211
155 3300048929 Ga0496126_0004615 Ga0496126_0004615_6383_7027 211
156 3300048929 Ga0496126_0068552 Ga0496126_0068552_1351_1998 211
157 3300053096 Ga0500641_0004495 Ga0500641_0004495_594_1229 211
158 3300053096 Ga0500641_0111657 Ga0500641_0111657_470_1105 211
159 3300053104 Ga0500556_0011499 Ga0500556_0011499_34_669 211
160 3300053117 Ga0500593_116447 Ga0500593_116447_269_907 211
161 3300053133 Ga0500655_011803 Ga0500655_011803_927_1562 211
162 3300053134 Ga0500658_0059407 Ga0500658_0059407_919_1554 211
163 3300053142 Ga0500577_0097015 Ga0500577_0097015_457_1101 211
164 3300053146 Ga0500588_0042463 Ga0500588_0042463_296_931 211
165 3300053153 Ga0500616_0000074 Ga0500616_0000074_194599_195237 211
166 3300053153 Ga0500616_0124950 Ga0500616_0124950_565_1200 211
167 3300053156 Ga0500622_0005874 Ga0500622_0005874_594_1238 211
168 3300053177 Ga0500636_0252655 Ga0500636_0252655_167_814 211

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00625

Guanylate_kin

Guanylate kinase

26

207

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7yki-assembly1.cif.gz_A crystal structure of magi2 pdz0-gk domain in complex with phospho-sapap1 gbr3 peptide 0.9341 41 90
4qrh-assembly1.cif.gz_A molecular mechanism and evolution of guanylate kinase regulation by (p)ppgpp 0.9136 9 191
1ex7-assembly1.cif.gz_A crystal structure of yeast guanylate kinase in complex with guanosine-5'-monophosphate 0.9077 11 190
2j41-assembly1.cif.gz_A crystal structure of staphylococcus aureus guanylate monophosphate kinase 0.9074 10 191
2j41-assembly1.cif.gz_B crystal structure of staphylococcus aureus guanylate monophosphate kinase 0.8936 10 191
ID Description Score Start End Superfamily
3tauB02 Alpha Beta;2-Layer Sandwich;Guanylate Kinase phosphate binding domain;Guanylate Kinase phosphate binding domain 0.9681 42 101 3.30.63.10
3neyE02 Alpha Beta;2-Layer Sandwich;Guanylate Kinase phosphate binding domain;Guanylate Kinase phosphate binding domain 0.9677 41 96 3.30.63.10
1s4qA02 Alpha Beta;2-Layer Sandwich;Guanylate Kinase phosphate binding domain;Guanylate Kinase phosphate binding domain 0.966 42 101 3.30.63.10
af_Q2QPW1_160_210_3.30.63.10 Alpha Beta;2-Layer Sandwich;Guanylate Kinase phosphate binding domain;Guanylate Kinase phosphate binding domain 0.9637 42 92 3.30.63.10
3tvtA03 Alpha Beta;2-Layer Sandwich;Guanylate Kinase phosphate binding domain;Guanylate Kinase phosphate binding domain 0.9632 42 96 3.30.63.10
ID Description Score Start End GO Terms
AF-A0A1F6PPM8-F1-model_v4 Guanylate kinase (EC 2.7.4.8) (GMP kinase) 0.9841 10 190 GO:0004385
GO:0005524
GO:0005829
AF-A0A396MZI1-F1-model_v4 deleted 0.9811 10 190
AF-A0A0G3EIG8-F1-model_v4 Guanylate kinase (EC 2.7.4.8) (GMP kinase) 0.9771 10 190 GO:0004385
GO:0005524
GO:0005829
AF-A0A7Y3GJY2-F1-model_v4 Guanylate kinase (EC 2.7.4.8) (GMP kinase) 0.9751 10 190 GO:0004385
GO:0005524
GO:0005829
AF-A0A3D2HZ83-F1-model_v4 Guanylate kinase (EC 2.7.4.8) (GMP kinase) 0.9739 10 188 GO:0004385
GO:0005524
GO:0005829

Feature Viewer

pLDDT pTM Quality
93.04 0.87 High
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Predicted Structure (AlphaFold2)

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