F252467

General Info

Members Datasets Scaffolds Average Seq Length
168 43 336 329

Family's Representative Sequence

Representative Sequence 3300006871|Ga0075434_100325477|Ga0075434_1003254771
Length 397
Sequence MGVSGGQREANRRDSGRALGGQGTHSGLQQPNTALEPTRNSLRSCVAPALARGSPPALGFHGKTKVGMRLTEETIMWCSTVGVIVTLSILAAPIVTHPQPAGKVYRIGLLYSSPALEAFRQGLRDLGYAEGQHIVLEPRWAKGSEARLHELAAELVQLPVDVLVPGGTRATLAAQHATRTIPIVMLVGVDPVAAGLIASLGHPGGNMTGLSVMTGELSGKQLEFLKEAVPMVSRVAVLANPTDPNTPPRLQYLQGVAHALRVQLHVLEVQSREDVERAFAAIQREGIGAFLVLSDTLLMDQFRSDITAFALRHRLPAMYTASGDVEAGGLMTYRASLPDMYRRAASYVDKILKGTKPGDLPVEQPTKFTLVINLKTAQAIGLTIPPTLLFQADEVIR

Samples

Sample ID Description Type Environment
1 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
4 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
13 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
26 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
31 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
32 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
33 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
34 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
35 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
36 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
37 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
38 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
39 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
40 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
41 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
42 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
43 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 20.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075434_100325477 3300006871 Bacteria 1557
2 Ga0065707_10086735 3300005295 Bacteria 5322
3 Ga0070710_10034352 3300005437 Unclassified 2759
4 Ga0070711_100102387 3300005439 Unclassified 2086
5 Ga0070708_100079273 3300005445 Bacteria 2971
6 Ga0070706_100066953 3300005467 Bacteria 3322
7 Ga0070706_100092532 3300005467 Bacteria 2805
8 Ga0070706_100131952 3300005467 Unclassified 2331
9 Ga0070706_100137226 3300005467 Unclassified 2283
10 Ga0070706_100162066 3300005467 Bacteria 2088
11 Ga0070706_100298670 3300005467 Bacteria 1503
12 Ga0070707_100007217 3300005468 Bacteria 10310
13 Ga0070707_100249161 3300005468 Bacteria 1728
14 Ga0070698_100086320 3300005471 Bacteria 3124
15 Ga0070698_100105762 3300005471 Bacteria 2783
16 Ga0070698_100133015 3300005471 Bacteria 2442
17 Ga0070699_100037409 3300005518 Bacteria 4199
18 Ga0070699_100183853 3300005518 Bacteria 1855
19 Ga0070697_100319498 3300005536 Bacteria 1337
20 Ga0081455_10026005 3300005937 Bacteria 5392
21 Ga0081538_10004676 3300005981 Bacteria 12546
22 Ga0081538_10013212 3300005981 Bacteria 6554
23 Ga0081538_10024713 3300005981 Unclassified 4271
24 Ga0081538_10109160 3300005981 Bacteria 1364
25 Ga0081540_1101769 3300005983 Bacteria 1236
26 Ga0081539_10024936 3300005985 Unclassified 3865
27 Ga0081539_10068184 3300005985 Bacteria 1921
28 Ga0070717_10216180 3300006028 Bacteria 1683
29 Ga0070712_100007419 3300006175 Bacteria 6843
30 Ga0075428_100027901 3300006844 Bacteria 6246
31 Ga0075428_100027950 3300006844 Bacteria 6241
32 Ga0075428_100060599 3300006844 Bacteria 4144
33 Ga0075428_100093927 3300006844 Bacteria 3270
34 Ga0075428_100104610 3300006844 Bacteria 3087
35 Ga0075428_100129567 3300006844 Unclassified 2745
36 Ga0075428_100142325 3300006844 Bacteria 2607
37 Ga0075428_100153652 3300006844 Bacteria 2500
38 Ga0075428_100157166 3300006844 Unclassified 2469
39 Ga0075428_100174390 3300006844 Bacteria 2329
40 Ga0075428_100240219 3300006844 Bacteria 1954
41 Ga0075428_100289077 3300006844 Bacteria 1763
42 Ga0075428_100515751 3300006844 Bacteria 1279
43 Ga0075428_100602399 3300006844 Bacteria 1173
44 Ga0075430_100057561 3300006846 Bacteria 3269
45 Ga0075430_100101841 3300006846 Bacteria 2398
46 Ga0075430_100123545 3300006846 Bacteria 2158
47 Ga0075430_100237499 3300006846 Bacteria 1511
48 Ga0075430_100333774 3300006846 Bacteria 1252
49 Ga0075431_100037030 3300006847 Bacteria 5026
50 Ga0075431_100048114 3300006847 Bacteria 4398
51 Ga0075431_100053583 3300006847 Bacteria 4159
52 Ga0075431_100063551 3300006847 Bacteria 3809
53 Ga0075431_100114020 3300006847 Bacteria 2790
54 Ga0075431_100200021 3300006847 Bacteria 2044
55 Ga0075431_100220327 3300006847 Bacteria 1936
56 Ga0075431_100332520 3300006847 Unclassified 1530
57 Ga0075431_100412925 3300006847 Bacteria 1350
58 Ga0075431_100508703 3300006847 Bacteria 1195
59 Ga0075433_10181394 3300006852 Bacteria 1873
60 Ga0075433_10215586 3300006852 Bacteria 1706
61 Ga0075433_10245655 3300006852 Unclassified 1589
62 Ga0075429_100015143 3300006880 Bacteria 6683
63 Ga0075429_100021716 3300006880 Bacteria 5564
64 Ga0075429_100038289 3300006880 Bacteria 4174
65 Ga0075429_100046481 3300006880 Bacteria 3777
66 Ga0075429_100046828 3300006880 Bacteria 3762
67 Ga0075429_100225189 3300006880 Bacteria 1642
68 Ga0075429_100239761 3300006880 Bacteria 1588
69 Ga0075429_100307910 3300006880 Bacteria 1387
70 Ga0111539_10083340 3300009094 Bacteria 3760
71 Ga0111539_10173786 3300009094 Unclassified 2516
72 Ga0111539_10472436 3300009094 Bacteria 1460
73 Ga0111539_10535402 3300009094 Bacteria 1364
74 Ga0111539_10544056 3300009094 Bacteria 1353
75 Ga0114129_10048923 3300009147 Bacteria 5942
76 Ga0114129_10053492 3300009147 Bacteria 5662
77 Ga0114129_10108734 3300009147 Bacteria 3827
78 Ga0114129_10138090 3300009147 Unclassified 3344
79 Ga0114129_10192426 3300009147 Unclassified 2769
80 Ga0114129_10227811 3300009147 Bacteria 2511
81 Ga0114129_10239305 3300009147 Unclassified 2440
82 Ga0114129_10279330 3300009147 Bacteria 2232
83 Ga0114129_10302344 3300009147 Unclassified 2132
84 Ga0114129_10347747 3300009147 Bacteria 1965
85 Ga0114129_10369247 3300009147 Unclassified 1897
86 Ga0114129_10418530 3300009147 Bacteria 1763
87 Ga0114129_10418856 3300009147 Bacteria 1762
88 Ga0114129_10449359 3300009147 Bacteria 1690
89 Ga0114129_10467767 3300009147 Bacteria 1652
90 Ga0114129_10580877 3300009147 Bacteria 1454
91 Ga0114129_10582914 3300009147 Bacteria 1451
92 Ga0105249_10265575 3300009553 Bacteria 1707
93 Ga0105249_10297151 3300009553 Unclassified 1618
94 Ga0163162_10131679 3300013306 Bacteria 2609
95 Ga0207692_10042417 3300025898 Unclassified 2258
96 Ga0207684_10033607 3300025910 Bacteria 4362
97 Ga0207684_10051745 3300025910 Bacteria 3485
98 Ga0207684_10131420 3300025910 Bacteria 2148
99 Ga0207684_10140757 3300025910 Bacteria 2074
100 Ga0207693_10056070 3300025915 Unclassified 3090
101 Ga0207646_10006534 3300025922 Bacteria 12033
102 Ga0207646_10038217 3300025922 Unclassified 4325
103 Ga0207428_10115616 3300027907 Unclassified 2061
104 Ga0207428_10258320 3300027907 Bacteria 1298
105 Ga0501072_0323814 3300049588 Bacteria 1225
106 Ga0501074_0253957 3300049590 Bacteria 1250
107 Ga0501075_0161928 3300049591 Bacteria 1707
108 Ga0501081_0214127 3300049743 Bacteria 1400
109 nmdc:mga05p37_105878_c1 3300050507 Unclassified 3460
110 nmdc:mga05p37_124912_c1 3300050507 Bacteria 3160
111 nmdc:mga05p37_13356_c1 3300050507 Bacteria 9838
112 nmdc:mga05p37_140821_c1 3300050507 Bacteria 2955
113 nmdc:mga05p37_158801_c1 3300050507 Unclassified 2762
114 nmdc:mga05p37_16757_c1 3300050507 Bacteria 8834
115 nmdc:mga05p37_182183_c1 3300050507 Bacteria 2555
116 nmdc:mga05p37_239421_c1 3300050507 Bacteria 2183
117 nmdc:mga05p37_24344_c1 3300050507 Bacteria 7357
118 nmdc:mga05p37_28899_c1 3300050507 Bacteria 6763
119 nmdc:mga05p37_37331_c1 3300050507 Bacteria 5956
120 nmdc:mga05p37_406429_c1 3300050507 Unclassified 1588
121 nmdc:mga05p37_481949_c1 3300050507 Bacteria 1428
122 nmdc:mga05p37_485555_c1 3300050507 Bacteria 1422
123 nmdc:mga05p37_497650_c1 3300050507 Bacteria 1400
124 nmdc:mga05p37_53435_c1 3300050507 Unclassified 4968
125 nmdc:mga05p37_570850_c1 3300050507 Unclassified 1283
126 nmdc:mga05p37_59397_c1 3300050507 Bacteria 4709
127 nmdc:mga05p37_77956_c1 3300050507 Bacteria 4080
128 nmdc:mga09592_14282_c1 3300050508 Bacteria 6482
129 nmdc:mga09592_171222_c1 3300050508 Bacteria 1878
130 nmdc:mga09592_175432_c1 3300050508 Unclassified 1854
131 nmdc:mga09592_24916_c1 3300050508 Bacteria 4948
132 nmdc:mga09592_274700_c1 3300050508 Bacteria 1462
133 nmdc:mga09592_313464_c1 3300050508 Bacteria 1359
134 nmdc:mga09592_369789_c1 3300050508 Bacteria 1240
135 nmdc:mga09592_85329_c1 3300050508 Unclassified 2694
136 nmdc:mga0qj67_120486_c1 3300050509 Bacteria 2122
137 nmdc:mga0qj67_166388_c1 3300050509 Bacteria 1790
138 nmdc:mga0qj67_241142_c1 3300050509 Unclassified 1467
139 nmdc:mga0qj67_323151_c1 3300050509 Bacteria 1249
140 nmdc:mga0qj67_393319_c1 3300050509 Bacteria 1119
141 nmdc:mga06r32_124528_c1 3300050510 Bacteria 2545
142 nmdc:mga06r32_155308_c1 3300050510 Bacteria 2269
143 nmdc:mga06r32_15563_c1 3300050510 Bacteria 6909
144 nmdc:mga06r32_248412_c1 3300050510 Bacteria 1767
145 nmdc:mga06r32_29747_c1 3300050510 Bacteria 5123
146 nmdc:mga06r32_311344_c1 3300050510 Bacteria 1560
147 nmdc:mga06r32_338152_c1 3300050510 Unclassified 1490
148 nmdc:mga06r32_40837_c1 3300050510 Bacteria 4406
149 nmdc:mga06r32_423760_c1 3300050510 Unclassified 1312
150 nmdc:mga06r32_425627_c1 3300050510 Bacteria 1309
151 nmdc:mga06r32_476808_c1 3300050510 Bacteria 1226
152 nmdc:mga06r32_499360_c1 3300050510 Bacteria 1194
153 nmdc:mga06r32_63106_c1 3300050510 Unclassified 3570
154 nmdc:mga08y16_137136_c1 3300050511 Bacteria 2543
155 nmdc:mga08y16_207877_c1 3300050511 Bacteria 2027
156 nmdc:mga08y16_296366_c1 3300050511 Bacteria 1667
157 nmdc:mga08y16_59349_c1 3300050511 Unclassified 3996
158 nmdc:mga08y16_62495_c1 3300050511 Bacteria 3889
159 nmdc:mga08y16_704005_c1 3300050511 Bacteria 1010
160 nmdc:mga0n895_333102_c1 3300050512 Bacteria 1538
161 nmdc:mga0rr50_335929_c1 3300050513 Unclassified 1269
162 nmdc:mga0a205_123738_c1 3300050515 Unclassified 2486
163 nmdc:mga0a205_136184_c1 3300050515 Bacteria 1677
164 nmdc:mga0a205_216357_c1 3300050515 Bacteria 1803
165 nmdc:mga0a205_252335_c1 3300050515 Bacteria 1643
166 nmdc:mga0a205_51622_c1 3300050515 Bacteria 3970
167 Ga0530510_0244697 3300061734 Bacteria 1336
168 Ga0530510_0264183 3300061734 Bacteria 1284
169 Ga0075434_100325477
170 Ga0065707_10086735
171 Ga0070710_10034352
172 Ga0070711_100102387
173 Ga0070708_100079273
174 Ga0070706_100066953
175 Ga0070706_100092532
176 Ga0070706_100131952
177 Ga0070706_100137226
178 Ga0070706_100162066
179 Ga0070706_100298670
180 Ga0070707_100007217
181 Ga0070707_100249161
182 Ga0070698_100086320
183 Ga0070698_100105762
184 Ga0070698_100133015
185 Ga0070699_100037409
186 Ga0070699_100183853
187 Ga0070697_100319498
188 Ga0081455_10026005
189 Ga0081538_10004676
190 Ga0081538_10013212
191 Ga0081538_10024713
192 Ga0081538_10109160
193 Ga0081540_1101769
194 Ga0081539_10024936
195 Ga0081539_10068184
196 Ga0070717_10216180
197 Ga0070712_100007419
198 Ga0075428_100027901
199 Ga0075428_100027950
200 Ga0075428_100060599
201 Ga0075428_100093927
202 Ga0075428_100104610
203 Ga0075428_100129567
204 Ga0075428_100142325
205 Ga0075428_100153652
206 Ga0075428_100157166
207 Ga0075428_100174390
208 Ga0075428_100240219
209 Ga0075428_100289077
210 Ga0075428_100515751
211 Ga0075428_100602399
212 Ga0075430_100057561
213 Ga0075430_100101841
214 Ga0075430_100123545
215 Ga0075430_100237499
216 Ga0075430_100333774
217 Ga0075431_100037030
218 Ga0075431_100048114
219 Ga0075431_100053583
220 Ga0075431_100063551
221 Ga0075431_100114020
222 Ga0075431_100200021
223 Ga0075431_100220327
224 Ga0075431_100332520
225 Ga0075431_100412925
226 Ga0075431_100508703
227 Ga0075433_10181394
228 Ga0075433_10215586
229 Ga0075433_10245655
230 Ga0075429_100015143
231 Ga0075429_100021716
232 Ga0075429_100038289
233 Ga0075429_100046481
234 Ga0075429_100046828
235 Ga0075429_100225189
236 Ga0075429_100239761
237 Ga0075429_100307910
238 Ga0111539_10083340
239 Ga0111539_10173786
240 Ga0111539_10472436
241 Ga0111539_10535402
242 Ga0111539_10544056
243 Ga0114129_10048923
244 Ga0114129_10053492
245 Ga0114129_10108734
246 Ga0114129_10138090
247 Ga0114129_10192426
248 Ga0114129_10227811
249 Ga0114129_10239305
250 Ga0114129_10279330
251 Ga0114129_10302344
252 Ga0114129_10347747
253 Ga0114129_10369247
254 Ga0114129_10418530
255 Ga0114129_10418856
256 Ga0114129_10449359
257 Ga0114129_10467767
258 Ga0114129_10580877
259 Ga0114129_10582914
260 Ga0105249_10265575
261 Ga0105249_10297151
262 Ga0163162_10131679
263 Ga0207692_10042417
264 Ga0207684_10033607
265 Ga0207684_10051745
266 Ga0207684_10131420
267 Ga0207684_10140757
268 Ga0207693_10056070
269 Ga0207646_10006534
270 Ga0207646_10038217
271 Ga0207428_10115616
272 Ga0207428_10258320
273 Ga0501072_0323814
274 Ga0501074_0253957
275 Ga0501075_0161928
276 Ga0501081_0214127
277 nmdc:mga05p37_105878_c1
278 nmdc:mga05p37_124912_c1
279 nmdc:mga05p37_13356_c1
280 nmdc:mga05p37_140821_c1
281 nmdc:mga05p37_158801_c1
282 nmdc:mga05p37_16757_c1
283 nmdc:mga05p37_182183_c1
284 nmdc:mga05p37_239421_c1
285 nmdc:mga05p37_24344_c1
286 nmdc:mga05p37_28899_c1
287 nmdc:mga05p37_37331_c1
288 nmdc:mga05p37_406429_c1
289 nmdc:mga05p37_481949_c1
290 nmdc:mga05p37_485555_c1
291 nmdc:mga05p37_497650_c1
292 nmdc:mga05p37_53435_c1
293 nmdc:mga05p37_570850_c1
294 nmdc:mga05p37_59397_c1
295 nmdc:mga05p37_77956_c1
296 nmdc:mga09592_14282_c1
297 nmdc:mga09592_171222_c1
298 nmdc:mga09592_175432_c1
299 nmdc:mga09592_24916_c1
300 nmdc:mga09592_274700_c1
301 nmdc:mga09592_313464_c1
302 nmdc:mga09592_369789_c1
303 nmdc:mga09592_85329_c1
304 nmdc:mga0qj67_120486_c1
305 nmdc:mga0qj67_166388_c1
306 nmdc:mga0qj67_241142_c1
307 nmdc:mga0qj67_323151_c1
308 nmdc:mga0qj67_393319_c1
309 nmdc:mga06r32_124528_c1
310 nmdc:mga06r32_155308_c1
311 nmdc:mga06r32_15563_c1
312 nmdc:mga06r32_248412_c1
313 nmdc:mga06r32_29747_c1
314 nmdc:mga06r32_311344_c1
315 nmdc:mga06r32_338152_c1
316 nmdc:mga06r32_40837_c1
317 nmdc:mga06r32_423760_c1
318 nmdc:mga06r32_425627_c1
319 nmdc:mga06r32_476808_c1
320 nmdc:mga06r32_499360_c1
321 nmdc:mga06r32_63106_c1
322 nmdc:mga08y16_137136_c1
323 nmdc:mga08y16_207877_c1
324 nmdc:mga08y16_296366_c1
325 nmdc:mga08y16_59349_c1
326 nmdc:mga08y16_62495_c1
327 nmdc:mga08y16_704005_c1
328 nmdc:mga0n895_333102_c1
329 nmdc:mga0rr50_335929_c1
330 nmdc:mga0a205_123738_c1
331 nmdc:mga0a205_136184_c1
332 nmdc:mga0a205_216357_c1
333 nmdc:mga0a205_252335_c1
334 nmdc:mga0a205_51622_c1
335 Ga0530510_0244697
336 Ga0530510_0264183

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04392

ABC_sub_bind

ABC transporter substrate binding protein

109

396

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lkv-assembly1.cif.gz_A-2 crystal structure of conserved domain protein from vibrio cholerae o1 biovar eltor str. n16961 0.9122 28 325
3lkv-assembly1.cif.gz_A-2 crystal structure of conserved domain protein from vibrio cholerae o1 biovar eltor str. n16961 0.9064 28 325
3lft-assembly1.cif.gz_A the crystal structure of the abc domain in complex with l-trp from streptococcus pneumonia to 1.35a 0.8972 30 326
3lft-assembly1.cif.gz_A the crystal structure of the abc domain in complex with l-trp from streptococcus pneumonia to 1.35a 0.8886 30 326
3lft-assembly2.cif.gz_B the crystal structure of the abc domain in complex with l-trp from streptococcus pneumonia to 1.35a 0.8753 32 326
ID Description Score Start End Superfamily
3lkvA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8999 149 325 3.40.50.2300
3lkvA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8766 149 325 3.40.50.2300
3lftA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8761 149 326 3.40.50.2300
3lftA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8595 149 326 3.40.50.2300
af_P02924_26_131_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8388 165 251 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A536ZNV9-F1-model_v4 ABC transporter substrate-binding protein 0.9809 219 327
AF-A0A536Z1U0-F1-model_v4 ABC transporter substrate-binding protein 0.9741 150 327
AF-A0A534TVN5-F1-model_v4 ABC transporter substrate-binding protein 0.9707 224 327
AF-A0A536Z3T8-F1-model_v4 ABC transporter substrate-binding protein 0.9686 231 327
AF-A0A2V7D4C4-F1-model_v4 ABC transporter substrate-binding protein 0.9664 229 327

Map