F252247
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 168 | 129 | 165 | 999 |
Family's Representative Sequence
| Representative Sequence | 3300005577|Ga0068857_100034177|Ga0068857_1000341771 |
| Length | 1117 |
| Sequence | MSSESFGAVGTIDSVKAGLERDVCQCSADVVAPASLRAGEAASLPPLHRQGETSRAGECGGCKRSWKFILSLSKDFVTGLQGCGRYTPQKLLTHPSASRSVPGTLSYEKVSMIGFIIKKIIGSKNDREVKRLQPMVTQINEVEASLQSKPDEYLREKTAEWKARCSAIQDDAELKAALLEILPEAFAVVKNTCRRLTDRKTEVNVRGYPILWEMIPFDVQLIGGYALHTGRIAEMATGEGKTLVATLPVYLNALSGRGVHLVTVNDYLAARDSEWMGAVYRFLGLTVGCILHDQSPAERRAQYACDITYGTNAEFGFDYLRDNGMAVRAEEQVQRGHYFAIIDEVDSILIDEARTPLIISGPSVINTDHGIYDRFKPQVESLFHAQERLTSRFLNEARDLIKKRQPEDGSNPVSGDELEREIGLLLYRVKLGTPRSDELMQLLEDPENMRLMNKAELALHADQSKRDLYAQKEQLFFAIEEKSHDADLTEKGREFLSPKDPEAFVLPDLAAAFHEIDIGAEKDPHKRLEMKTKLQQQLEGKAQQIHSISQLLKAYGLYLKDIHYIVEEGKVVIVDENTGRKMAGRRWSDGLHQAVEAKEAVEVERETQTYATITIQNYFRLYRKLAGMTGTAETEANEFHDIYKLGVLVVPTNRAVARKDAHDTVYKTRREKFSAVVKEVQTVHAAGRPILLGTVSVESSEMLSKMLKKVGIVHSVLNAKYHQQEAEIVARAGQRGSVTIATNMAGRGTDIKLGAGVADVGGLHVIGTERHEARRIDRQLRGRCARQGDPGSSHFFISLEDDLMRLFGSDKIVKYMEKMGLEEGQELEHPLLNRSIEQAQKRVEQHNFQIRKRTLEYDDVMNKQREVIYGFRNEIIHGEDVRDRLMDVMEEVVLQKTQEFTSAEDPADWNVRGLADWINLTFPLGISEEEIVKVARAGTEEPVSGSLFDGLTAAQFAVCNMIANAIREAYELKVSFEKEDALKSVERYTILSAIDKLWQEHLYAMDGLRSSIGLRAYGQRDPLLEYKGEAFKLFGELMVNIKTEICHNIFRSASSLMAFEQFLRKLPQRKAGSDMVSEANEALAKAKPVRSGPKVGRNDPCPCNSGKKFKNCCGKNG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2718217752 | Candidatus Xiphinematobacter sp. Idaho Grape | Isolate | Unclassified |
| 2 | 2786546517 | Verrucomicrobia bacterium LW23 | Isolate | Rhizoplane |
| 3 | 2786546548 | Spartobacteria bacterium LR76 | Isolate | Unclassified |
| 4 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 5 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 6 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 9 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 15 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 16 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 21 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 22 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 23 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 24 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 25 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 26 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 27 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 28 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 30 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 31 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 60 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 61 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 62 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 63 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 64 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 65 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 66 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 67 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 68 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 69 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 70 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 71 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 72 | 3300035084 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 | Metagenome | Rhizosphere |
| 73 | 3300035089 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 | Metagenome | Rhizosphere |
| 74 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 75 | 3300035242 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 | Metagenome | Rhizosphere |
| 76 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 77 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 78 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 79 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 80 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 81 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 82 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 83 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 84 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 85 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 86 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 87 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 88 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 89 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 103 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 104 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 105 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 106 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 107 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 108 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 109 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 110 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 111 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 117 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 123 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 124 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 125 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300053103 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere | Metagenome | Endosphere |
| 127 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 128 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 129 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.21 |
| Metatranscriptomes | 0 |
| Isolates | 1.79 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.38 |
| Nodule | 0 |
| Rhizoplane | 6.55 |
| Rhizosphere | 88.1 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.98 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10000189 | 3300003203 | Bacteria | 27494 |
| 2 | rootH2_10002966 | 3300003320 | Bacteria | 63709 |
| 3 | Ga0070658_10028904 | 3300005327 | Bacteria | 4451 |
| 4 | Ga0070670_100021870 | 3300005331 | Bacteria | 5501 |
| 5 | Ga0070689_100002597 | 3300005340 | Bacteria | 11836 |
| 6 | Ga0070661_100000715 | 3300005344 | Bacteria | 24345 |
| 7 | Ga0070671_100037640 | 3300005355 | Bacteria | 4013 |
| 8 | Ga0070673_100007675 | 3300005364 | Bacteria | 7136 |
| 9 | Ga0070659_100004786 | 3300005366 | Bacteria | 9678 |
| 10 | Ga0070705_100013760 | 3300005440 | Bacteria | 4144 |
| 11 | Ga0070681_10039731 | 3300005458 | Bacteria | 4715 |
| 12 | Ga0070706_100000035 | 3300005467 | Bacteria | 152107 |
| 13 | Ga0070706_100000343 | 3300005467 | Bacteria | 56046 |
| 14 | Ga0070706_100009888 | 3300005467 | Bacteria | 8858 |
| 15 | Ga0070707_100002278 | 3300005468 | Bacteria | 18346 |
| 16 | Ga0070707_100010859 | 3300005468 | Bacteria | 8481 |
| 17 | Ga0070698_100004983 | 3300005471 | Bacteria | 14549 |
| 18 | Ga0070699_100005264 | 3300005518 | Bacteria | 11360 |
| 19 | Ga0070699_100045148 | 3300005518 | Bacteria | 3813 |
| 20 | Ga0070697_100026557 | 3300005536 | Bacteria | 4627 |
| 21 | Ga0068853_100000002 | 3300005539 | Bacteria | 485323 |
| 22 | Ga0068855_100024243 | 3300005563 | Bacteria | 7263 |
| 23 | Ga0068857_100002726 | 3300005577 | Bacteria | 14491 |
| 24 | Ga0068857_100034177 | 3300005577 | Bacteria | 4498 |
| 25 | Ga0068856_100000106 | 3300005614 | Bacteria | 81717 |
| 26 | Ga0068856_100021071 | 3300005614 | Bacteria | 6335 |
| 27 | Ga0068859_100032923 | 3300005617 | Bacteria | 5206 |
| 28 | Ga0068858_100015803 | 3300005842 | Bacteria | 7099 |
| 29 | Ga0081455_10000770 | 3300005937 | Bacteria | 41373 |
| 30 | Ga0081539_10000287 | 3300005985 | Bacteria | 113988 |
| 31 | Ga0070717_10015243 | 3300006028 | Bacteria | 5931 |
| 32 | Ga0075428_100007808 | 3300006844 | Bacteria | 11859 |
| 33 | Ga0075431_100028166 | 3300006847 | Bacteria | 5769 |
| 34 | Ga0097620_100032923 | 3300006931 | Bacteria | 5206 |
| 35 | Ga0105240_10026502 | 3300009093 | Bacteria | 7606 |
| 36 | Ga0111539_10029437 | 3300009094 | Bacteria | 6688 |
| 37 | Ga0114129_10000442 | 3300009147 | Bacteria | 49250 |
| 38 | Ga0105243_10000415 | 3300009148 | Bacteria | 44837 |
| 39 | Ga0105242_10012205 | 3300009176 | Bacteria | 6612 |
| 40 | Ga0105238_10004185 | 3300009551 | Bacteria | 14323 |
| 41 | Ga0105239_10005911 | 3300010375 | Bacteria | 14252 |
| 42 | Ga0157373_10010600 | 3300013100 | Bacteria | 6783 |
| 43 | Ga0157374_10000026 | 3300013296 | Bacteria | 238236 |
| 44 | Ga0157378_10027818 | 3300013297 | Bacteria | 4987 |
| 45 | Ga0157378_10068427 | 3300013297 | Bacteria | 3184 |
| 46 | Ga0157376_10000500 | 3300014969 | Bacteria | 25354 |
| 47 | Ga0207645_10011153 | 3300025907 | Bacteria | 6147 |
| 48 | Ga0207705_10022935 | 3300025909 | Bacteria | 4451 |
| 49 | Ga0207684_10000043 | 3300025910 | Bacteria | 259939 |
| 50 | Ga0207684_10004414 | 3300025910 | Bacteria | 13249 |
| 51 | Ga0207707_10017305 | 3300025912 | Bacteria | 6283 |
| 52 | Ga0207663_10004258 | 3300025916 | Bacteria | 7099 |
| 53 | Ga0207649_10001156 | 3300025920 | Bacteria | 15890 |
| 54 | Ga0207646_10004744 | 3300025922 | Bacteria | 14638 |
| 55 | Ga0207646_10005562 | 3300025922 | Bacteria | 13229 |
| 56 | Ga0207646_10012526 | 3300025922 | Bacteria | 8143 |
| 57 | Ga0207650_10042717 | 3300025925 | Bacteria | 3326 |
| 58 | Ga0207690_10008936 | 3300025932 | Bacteria | 5947 |
| 59 | Ga0207709_10015664 | 3300025935 | Bacteria | 4206 |
| 60 | Ga0207665_10021079 | 3300025939 | Bacteria | 4283 |
| 61 | Ga0207639_10000009 | 3300026041 | Bacteria | 432727 |
| 62 | Ga0207708_10002220 | 3300026075 | Bacteria | 14360 |
| 63 | Ga0207702_10000897 | 3300026078 | Bacteria | 30919 |
| 64 | Ga0207641_10019393 | 3300026088 | Bacteria | 5582 |
| 65 | Ga0207674_10004446 | 3300026116 | Bacteria | 16849 |
| 66 | Ga0207674_10036497 | 3300026116 | Bacteria | 5118 |
| 67 | Ga0265323_10000506 | 3300028653 | Bacteria | 21837 |
| 68 | Ga0265338_10000008 | 3300028800 | Bacteria | 481542 |
| 69 | Ga0265338_10000041 | 3300028800 | Bacteria | 230676 |
| 70 | Ga0265338_10000067 | 3300028800 | Bacteria | 186731 |
| 71 | Ga0265338_10001258 | 3300028800 | Bacteria | 41771 |
| 72 | Ga0265338_10002175 | 3300028800 | Bacteria | 30108 |
| 73 | Ga0265338_10004000 | 3300028800 | Bacteria | 20259 |
| 74 | Ga0265338_10005852 | 3300028800 | Bacteria | 15871 |
| 75 | Ga0265338_10011663 | 3300028800 | Bacteria | 10123 |
| 76 | Ga0265338_10015756 | 3300028800 | Bacteria | 8279 |
| 77 | Ga0265324_10000603 | 3300029957 | Bacteria | 24608 |
| 78 | Ga0265320_10000157 | 3300031240 | Bacteria | 56450 |
| 79 | Ga0265325_10014148 | 3300031241 | Bacteria | 4518 |
| 80 | Ga0265329_10000433 | 3300031242 | Bacteria | 22025 |
| 81 | Ga0265340_10000437 | 3300031247 | Bacteria | 22458 |
| 82 | Ga0265339_10002554 | 3300031249 | Bacteria | 12979 |
| 83 | Ga0265327_10001414 | 3300031251 | Bacteria | 30563 |
| 84 | Ga0265327_10006645 | 3300031251 | Bacteria | 9186 |
| 85 | Ga0265327_10020618 | 3300031251 | Bacteria | 4008 |
| 86 | Ga0265316_10007921 | 3300031344 | Bacteria | 9937 |
| 87 | Ga0265313_10001801 | 3300031595 | Bacteria | 19585 |
| 88 | Ga0265314_10000073 | 3300031711 | Bacteria | 148691 |
| 89 | Ga0373926_0004356 | 3300035083 | Bacteria | 4644 |
| 90 | Ga0373928_0000071 | 3300035084 | Bacteria | 17769 |
| 91 | Ga0373944_0001853 | 3300035089 | Bacteria | 5336 |
| 92 | Ga0373932_0000008 | 3300035112 | Bacteria | 167879 |
| 93 | Ga0373962_0000016 | 3300035242 | Bacteria | 48133 |
| 94 | Ga0373931_0000011 | 3300035691 | Bacteria | 304643 |
| 95 | Ga0373935_0004211 | 3300035692 | Bacteria | 8431 |
| 96 | Ga0373947_0004756 | 3300035725 | Bacteria | 7959 |
| 97 | Ga0373937_0002365 | 3300036401 | Bacteria | 15706 |
| 98 | Ga0373937_0022768 | 3300036401 | Bacteria | 5636 |
| 99 | Ga0373925_0000752 | 3300037068 | Bacteria | 29787 |
| 100 | Ga0373925_0023641 | 3300037068 | Bacteria | 4484 |
| 101 | Ga0395899_0000020 | 3300037312 | Bacteria | 404354 |
| 102 | Ga0395898_0000005 | 3300037466 | Bacteria | 621247 |
| 103 | Ga0395901_0087322 | 3300038443 | Bacteria | 3261 |
| 104 | Ga0436365_1198295 | 3300039437 | Bacteria | 7257 |
| 105 | Ga0436360_0179365 | 3300039438 | Bacteria | 8879 |
| 106 | Ga0466965_0002020 | 3300044683 | Bacteria | 8499 |
| 107 | Ga0466971_0000006 | 3300044719 | Bacteria | 128202 |
| 108 | Ga0451576_0024910 | 3300045051 | Bacteria | 6456 |
| 109 | Ga0451576_0043495 | 3300045051 | Bacteria | 4739 |
| 110 | Ga0495618_0001378 | 3300046514 | Bacteria | 16347 |
| 111 | Ga0495630_0000190 | 3300046517 | Bacteria | 48119 |
| 112 | Ga0495630_0007766 | 3300046517 | Bacteria | 7680 |
| 113 | Ga0495630_0021395 | 3300046517 | Bacteria | 4776 |
| 114 | Ga0495643_0001473 | 3300046522 | Bacteria | 21510 |
| 115 | Ga0495666_0020434 | 3300046526 | Bacteria | 3281 |
| 116 | Ga0495652_0008016 | 3300046529 | Bacteria | 9684 |
| 117 | Ga0495640_0025611 | 3300046533 | Bacteria | 4275 |
| 118 | Ga0495586_0000060 | 3300046535 | Bacteria | 65891 |
| 119 | Ga0495586_0001207 | 3300046535 | Bacteria | 14528 |
| 120 | Ga0495634_0008126 | 3300046642 | Bacteria | 7821 |
| 121 | Ga0495634_0038805 | 3300046642 | Bacteria | 3245 |
| 122 | Ga0495658_0006052 | 3300046683 | Bacteria | 5944 |
| 123 | Ga0495658_0009095 | 3300046683 | Bacteria | 4939 |
| 124 | Ga0495613_0009066 | 3300046689 | Bacteria | 7380 |
| 125 | Ga0495674_0008194 | 3300047319 | Bacteria | 9971 |
| 126 | Ga0495676_0019195 | 3300047321 | Bacteria | 6015 |
| 127 | Ga0495684_0028370 | 3300047471 | Bacteria | 4297 |
| 128 | Ga0496102_0000650 | 3300048905 | Bacteria | 35051 |
| 129 | Ga0496103_0007084 | 3300048906 | Bacteria | 6695 |
| 130 | Ga0496104_0007730 | 3300048907 | Bacteria | 9521 |
| 131 | Ga0496104_0058168 | 3300048907 | Bacteria | 3659 |
| 132 | Ga0496106_0006905 | 3300048909 | Bacteria | 8399 |
| 133 | Ga0496109_0000241 | 3300048912 | Bacteria | 53091 |
| 134 | Ga0496109_0004377 | 3300048912 | Bacteria | 11799 |
| 135 | Ga0496112_0015454 | 3300048915 | Bacteria | 7125 |
| 136 | Ga0496113_0019921 | 3300048916 | Bacteria | 4704 |
| 137 | Ga0496115_0023789 | 3300048918 | Bacteria | 4757 |
| 138 | Ga0496125_0000148 | 3300048928 | Bacteria | 154612 |
| 139 | Ga0501031_0000017 | 3300049568 | Bacteria | 106972 |
| 140 | Ga0501032_0000020 | 3300049569 | Bacteria | 148483 |
| 141 | Ga0501032_0012589 | 3300049569 | Bacteria | 6039 |
| 142 | Ga0501033_0000001 | 3300049570 | Bacteria | 795921 |
| 143 | Ga0501033_0000020 | 3300049570 | Bacteria | 192214 |
| 144 | Ga0501033_0000611 | 3300049570 | Bacteria | 33102 |
| 145 | Ga0501037_0000010 | 3300049573 | Bacteria | 200115 |
| 146 | Ga0501037_0022088 | 3300049573 | Bacteria | 4709 |
| 147 | Ga0501038_0000861 | 3300049574 | Bacteria | 26893 |
| 148 | Ga0501039_0001089 | 3300049575 | Bacteria | 19895 |
| 149 | Ga0501043_0000827 | 3300049579 | Bacteria | 27468 |
| 150 | Ga0501043_0001429 | 3300049579 | Bacteria | 20863 |
| 151 | Ga0501043_0034981 | 3300049579 | Bacteria | 3951 |
| 152 | Ga0501047_0001145 | 3300049581 | Bacteria | 26300 |
| 153 | Ga0501083_0001242 | 3300049744 | Bacteria | 17303 |
| 154 | Ga0501035_0000001 | 3300049822 | Bacteria | 1037138 |
| 155 | Ga0501044_0000265 | 3300049823 | Bacteria | 66253 |
| 156 | Ga0501044_0000275 | 3300049823 | Bacteria | 65642 |
| 157 | Ga0501044_0034001 | 3300049823 | Bacteria | 5351 |
| 158 | nmdc:mga0k408_392_c1 | 3300050493 | Bacteria | 23945 |
| 159 | nmdc:mga05p37_11627_c1 | 3300050507 | Bacteria | 10490 |
| 160 | nmdc:mga06r32_32063_c1 | 3300050510 | Bacteria | 4939 |
| 161 | Ga0495601_0013114 | 3300053077 | Bacteria | 4982 |
| 162 | Ga0500555_000003 | 3300053103 | Bacteria | 392994 |
| 163 | Ga0500556_0000205 | 3300053104 | Bacteria | 48547 |
| 164 | Ga0500616_0003907 | 3300053153 | Bacteria | 10960 |
| 165 | Ga0466962_0000013 | 3300061719 | Bacteria | 115412 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300047321 | Ga0495676_0019195 | Ga0495676_0019195_37_2778 | 762 |
| 2 | 3300046526 | Ga0495666_0020434 | Ga0495666_0020434_55_2838 | 776 |
| 3 | 3300048912 | Ga0496109_0004377 | Ga0496109_0004377_48_2675 | 804 |
| 4 | 3300035083 | Ga0373926_0004356 | Ga0373926_0004356_70_2865 | 824 |
| 5 | 3300053103 | Ga0500555_000003 | Ga0500555_000003_80344_83298 | 886 |
| 6 | 3300005467 | Ga0070706_100000343 | Ga0070706_10000034335 | 891 |
| 7 | 3300049744 | Ga0501083_0001242 | Ga0501083_0001242_13420_16413 | 891 |
| 8 | 3300005364 | Ga0070673_100007675 | Ga0070673_1000076754 | 893 |
| 9 | 3300025907 | Ga0207645_10011153 | Ga0207645_100111534 | 893 |
| 10 | 3300005331 | Ga0070670_100021870 | Ga0070670_1000218702 | 895 |
| 11 | 3300025935 | Ga0207709_10015664 | Ga0207709_100156642 | 896 |
| 12 | 3300045051 | Ga0451576_0043495 | Ga0451576_0043495_1525_4593 | 899 |
| 13 | 3300046517 | Ga0495630_0021395 | Ga0495630_0021395_1649_4729 | 901 |
| 14 | 3300048905 | Ga0496102_0000650 | Ga0496102_0000650_23651_26824 | 901 |
| 15 | 3300048907 | Ga0496104_0007730 | Ga0496104_0007730_5970_9143 | 901 |
| 16 | 3300048912 | Ga0496109_0000241 | Ga0496109_0000241_14200_17373 | 901 |
| 17 | 3300048915 | Ga0496112_0015454 | Ga0496112_0015454_1864_5037 | 901 |
| 18 | 3300010375 | Ga0105239_10005911 | Ga0105239_100059115 | 902 |
| 19 | 3300048906 | Ga0496103_0007084 | Ga0496103_0007084_368_3541 | 902 |
| 20 | 3300048909 | Ga0496106_0006905 | Ga0496106_0006905_5138_8311 | 902 |
| 21 | 3300048916 | Ga0496113_0019921 | Ga0496113_0019921_357_3530 | 902 |
| 22 | 3300028800 | Ga0265338_10001258 | Ga0265338_100012589 | 904 |
| 23 | 3300028800 | Ga0265338_10004000 | Ga0265338_100040006 | 904 |
| 24 | 3300028800 | Ga0265338_10005852 | Ga0265338_100058525 | 904 |
| 25 | 3300031240 | Ga0265320_10000157 | Ga0265320_1000015711 | 904 |
| 26 | 3300031344 | Ga0265316_10007921 | Ga0265316_100079215 | 904 |
| 27 | 3300005440 | Ga0070705_100013760 | Ga0070705_1000137602 | 905 |
| 28 | 3300005467 | Ga0070706_100009888 | Ga0070706_1000098883 | 905 |
| 29 | 3300005518 | Ga0070699_100005264 | Ga0070699_1000052644 | 905 |
| 30 | 3300025922 | Ga0207646_10004744 | Ga0207646_100047448 | 906 |
| 31 | 3300025939 | Ga0207665_10021079 | Ga0207665_100210792 | 906 |
| 32 | 3300038443 | Ga0395901_0087322 | Ga0395901_0087322_116_3142 | 906 |
| 33 | 3300046642 | Ga0495634_0038805 | Ga0495634_0038805_42_2981 | 906 |
| 34 | iso_pu_bacteria | 2786546517 | 2787437462 | 907 |
| 35 | 3300031595 | Ga0265313_10001801 | Ga0265313_100018014 | 909 |
| 36 | 3300039437 | Ga0436365_1198295 | Ga0436365_1198295_1369_4404 | 910 |
| 37 | 3300049568 | Ga0501031_0000017 | Ga0501031_0000017_32461_35538 | 910 |
| 38 | 3300049569 | Ga0501032_0000020 | Ga0501032_0000020_80608_83613 | 910 |
| 39 | 3300049569 | Ga0501032_0012589 | Ga0501032_0012589_790_3867 | 910 |
| 40 | 3300049570 | Ga0501033_0000001 | Ga0501033_0000001_531710_534715 | 910 |
| 41 | 3300049570 | Ga0501033_0000611 | Ga0501033_0000611_24707_27784 | 910 |
| 42 | 3300049823 | Ga0501044_0000275 | Ga0501044_0000275_45295_48372 | 910 |
| 43 | 3300005327 | Ga0070658_10028904 | Ga0070658_100289043 | 911 |
| 44 | 3300025909 | Ga0207705_10022935 | Ga0207705_100229353 | 911 |
| 45 | 3300048918 | Ga0496115_0023789 | Ga0496115_0023789_412_3408 | 911 |
| 46 | iso_pu_bacteria | 2718217752 | 2718716100 | 911 |
| 47 | 3300028800 | Ga0265338_10000041 | Ga0265338_1000004173 | 912 |
| 48 | 3300028800 | Ga0265338_10011663 | Ga0265338_100116633 | 912 |
| 49 | 3300028800 | Ga0265338_10015756 | Ga0265338_100157561 | 914 |
| 50 | 3300031242 | Ga0265329_10000433 | Ga0265329_100004332 | 914 |
| 51 | 3300031711 | Ga0265314_10000073 | Ga0265314_1000007375 | 914 |
| 52 | 3300005577 | Ga0068857_100034177 | Ga0068857_1000341771 | 915 |
| 53 | 3300005614 | Ga0068856_100021071 | Ga0068856_1000210714 | 915 |
| 54 | 3300006028 | Ga0070717_10015243 | Ga0070717_100152432 | 915 |
| 55 | 3300009093 | Ga0105240_10026502 | Ga0105240_100265023 | 915 |
| 56 | 3300009148 | Ga0105243_10000415 | Ga0105243_1000041529 | 915 |
| 57 | 3300026116 | Ga0207674_10036497 | Ga0207674_100364971 | 915 |
| 58 | 3300005577 | Ga0068857_100002726 | Ga0068857_1000027267 | 916 |
| 59 | 3300026116 | Ga0207674_10004446 | Ga0207674_100044466 | 916 |
| 60 | 3300009551 | Ga0105238_10004185 | Ga0105238_100041851 | 917 |
| 61 | 3300028653 | Ga0265323_10000506 | Ga0265323_1000050616 | 917 |
| 62 | 3300031247 | Ga0265340_10000437 | Ga0265340_100004373 | 918 |
| 63 | 3300031251 | Ga0265327_10001414 | Ga0265327_1000141416 | 918 |
| 64 | 3300005539 | Ga0068853_100000002 | Ga0068853_100000002314 | 919 |
| 65 | 3300025916 | Ga0207663_10004258 | Ga0207663_100042583 | 919 |
| 66 | 3300026041 | Ga0207639_10000009 | Ga0207639_10000009270 | 919 |
| 67 | 3300031251 | Ga0265327_10006645 | Ga0265327_100066452 | 919 |
| 68 | 3300048928 | Ga0496125_0000148 | Ga0496125_0000148_8886_11930 | 919 |
| 69 | 3300050507 | nmdc:mga05p37_11627_c1 | nmdc:mga05p37_11627_c1_5161_8328 | 919 |
| 70 | 3300050510 | nmdc:mga06r32_32063_c1 | nmdc:mga06r32_32063_c1_1536_4703 | 919 |
| 71 | iso_pu_bacteria | 2786546548 | 2787508639 | 919 |
| 72 | 3300009176 | Ga0105242_10012205 | Ga0105242_100122053 | 920 |
| 73 | 3300035084 | Ga0373928_0000071 | Ga0373928_0000071_10188_13262 | 920 |
| 74 | 3300035089 | Ga0373944_0001853 | Ga0373944_0001853_1363_4437 | 920 |
| 75 | 3300035112 | Ga0373932_0000008 | Ga0373932_0000008_112265_115339 | 920 |
| 76 | 3300035242 | Ga0373962_0000016 | Ga0373962_0000016_1032_4106 | 920 |
| 77 | 3300035691 | Ga0373931_0000011 | Ga0373931_0000011_247485_250559 | 920 |
| 78 | 3300005563 | Ga0068855_100024243 | Ga0068855_1000242434 | 921 |
| 79 | 3300005937 | Ga0081455_10000770 | Ga0081455_1000077013 | 921 |
| 80 | 3300006844 | Ga0075428_100007808 | Ga0075428_1000078083 | 921 |
| 81 | 3300031251 | Ga0265327_10020618 | Ga0265327_100206183 | 921 |
| 82 | 3300049573 | Ga0501037_0022088 | Ga0501037_0022088_1077_4151 | 921 |
| 83 | 3300049579 | Ga0501043_0034981 | Ga0501043_0034981_234_3308 | 921 |
| 84 | 3300049823 | Ga0501044_0034001 | Ga0501044_0034001_1334_4408 | 921 |
| 85 | 3300028800 | Ga0265338_10000008 | Ga0265338_10000008243 | 922 |
| 86 | 3300028800 | Ga0265338_10000067 | Ga0265338_10000067148 | 922 |
| 87 | 3300029957 | Ga0265324_10000603 | Ga0265324_100006039 | 922 |
| 88 | 3300037068 | Ga0373925_0023641 | Ga0373925_0023641_349_3420 | 922 |
| 89 | 3300039438 | Ga0436360_0179365 | Ga0436360_0179365_2163_5159 | 922 |
| 90 | 3300005458 | Ga0070681_10039731 | Ga0070681_100397313 | 923 |
| 91 | 3300006847 | Ga0075431_100028166 | Ga0075431_1000281662 | 923 |
| 92 | 3300009147 | Ga0114129_10000442 | Ga0114129_100004426 | 923 |
| 93 | 3300013296 | Ga0157374_10000026 | Ga0157374_1000002639 | 923 |
| 94 | 3300013297 | Ga0157378_10068427 | Ga0157378_100684271 | 923 |
| 95 | 3300014969 | Ga0157376_10000500 | Ga0157376_1000050017 | 923 |
| 96 | 3300025912 | Ga0207707_10017305 | Ga0207707_100173053 | 923 |
| 97 | 3300028800 | Ga0265338_10002175 | Ga0265338_100021751 | 923 |
| 98 | 3300031241 | Ga0265325_10014148 | Ga0265325_100141483 | 923 |
| 99 | 3300036401 | Ga0373937_0022768 | Ga0373937_0022768_2275_5355 | 923 |
| 100 | 3300045051 | Ga0451576_0024910 | Ga0451576_0024910_2638_5628 | 923 |
| 101 | 3300046514 | Ga0495618_0001378 | Ga0495618_0001378_11877_14957 | 923 |
| 102 | 3300046535 | Ga0495586_0001207 | Ga0495586_0001207_2312_5392 | 923 |
| 103 | 3300046642 | Ga0495634_0008126 | Ga0495634_0008126_3588_6668 | 923 |
| 104 | 3300046683 | Ga0495658_0006052 | Ga0495658_0006052_931_4026 | 923 |
| 105 | 3300046683 | Ga0495658_0009095 | Ga0495658_0009095_570_3659 | 923 |
| 106 | 3300046689 | Ga0495613_0009066 | Ga0495613_0009066_2524_5604 | 923 |
| 107 | 3300026088 | Ga0207641_10019393 | Ga0207641_100193932 | 924 |
| 108 | 3300035692 | Ga0373935_0004211 | Ga0373935_0004211_2715_5810 | 924 |
| 109 | 3300035725 | Ga0373947_0004756 | Ga0373947_0004756_3356_6451 | 924 |
| 110 | 3300037068 | Ga0373925_0000752 | Ga0373925_0000752_115_3210 | 924 |
| 111 | 3300046517 | Ga0495630_0000190 | Ga0495630_0000190_37408_40635 | 924 |
| 112 | 3300046517 | Ga0495630_0007766 | Ga0495630_0007766_1854_4949 | 924 |
| 113 | 3300046533 | Ga0495640_0025611 | Ga0495640_0025611_353_3580 | 924 |
| 114 | 3300046535 | Ga0495586_0000060 | Ga0495586_0000060_46774_50001 | 924 |
| 115 | 3300047319 | Ga0495674_0008194 | Ga0495674_0008194_2866_6093 | 924 |
| 116 | 3300005355 | Ga0070671_100037640 | Ga0070671_1000376402 | 925 |
| 117 | 3300005614 | Ga0068856_100000106 | Ga0068856_10000010617 | 925 |
| 118 | 3300009094 | Ga0111539_10029437 | Ga0111539_100294372 | 925 |
| 119 | 3300013100 | Ga0157373_10010600 | Ga0157373_100106003 | 925 |
| 120 | 3300026078 | Ga0207702_10000897 | Ga0207702_1000089711 | 925 |
| 121 | 3300031249 | Ga0265339_10002554 | Ga0265339_100025546 | 925 |
| 122 | 3300037312 | Ga0395899_0000020 | Ga0395899_0000020_253221_256220 | 925 |
| 123 | 3300037466 | Ga0395898_0000005 | Ga0395898_0000005_250075_253143 | 925 |
| 124 | 3300044683 | Ga0466965_0002020 | Ga0466965_0002020_2400_5396 | 925 |
| 125 | 3300044719 | Ga0466971_0000006 | Ga0466971_0000006_28053_31049 | 925 |
| 126 | 3300049570 | Ga0501033_0000020 | Ga0501033_0000020_156721_159717 | 925 |
| 127 | 3300049573 | Ga0501037_0000010 | Ga0501037_0000010_96576_99572 | 925 |
| 128 | 3300049575 | Ga0501039_0001089 | Ga0501039_0001089_5797_8883 | 925 |
| 129 | 3300049579 | Ga0501043_0000827 | Ga0501043_0000827_4176_7166 | 925 |
| 130 | 3300049579 | Ga0501043_0001429 | Ga0501043_0001429_13964_17050 | 925 |
| 131 | 3300049581 | Ga0501047_0001145 | Ga0501047_0001145_22211_25297 | 925 |
| 132 | 3300049822 | Ga0501035_0000001 | Ga0501035_0000001_762659_765745 | 925 |
| 133 | 3300049823 | Ga0501044_0000265 | Ga0501044_0000265_51201_54197 | 925 |
| 134 | 3300061719 | Ga0466962_0000013 | Ga0466962_0000013_64407_67403 | 925 |
| 135 | 3300003320 | rootH2_10002966 | rootH2_1000296618 | 926 |
| 136 | 3300005344 | Ga0070661_100000715 | Ga0070661_1000007157 | 926 |
| 137 | 3300005366 | Ga0070659_100004786 | Ga0070659_1000047865 | 926 |
| 138 | 3300025920 | Ga0207649_10001156 | Ga0207649_100011567 | 926 |
| 139 | 3300025932 | Ga0207690_10008936 | Ga0207690_100089362 | 926 |
| 140 | 3300046522 | Ga0495643_0001473 | Ga0495643_0001473_16667_19654 | 926 |
| 141 | 3300049574 | Ga0501038_0000861 | Ga0501038_0000861_7968_10964 | 926 |
| 142 | 3300005340 | Ga0070689_100002597 | Ga0070689_1000025974 | 927 |
| 143 | 3300005842 | Ga0068858_100015803 | Ga0068858_1000158032 | 927 |
| 144 | 3300025925 | Ga0207650_10042717 | Ga0207650_100427171 | 927 |
| 145 | 3300026075 | Ga0207708_10002220 | Ga0207708_100022206 | 927 |
| 146 | 3300047471 | Ga0495684_0028370 | Ga0495684_0028370_695_3697 | 927 |
| 147 | 3300048907 | Ga0496104_0058168 | Ga0496104_0058168_587_3586 | 927 |
| 148 | 3300050493 | nmdc:mga0k408_392_c1 | nmdc:mga0k408_392_c1_13951_16953 | 927 |
| 149 | 3300053104 | Ga0500556_0000205 | Ga0500556_0000205_4291_7293 | 927 |
| 150 | 3300053153 | Ga0500616_0003907 | Ga0500616_0003907_2330_5320 | 927 |
| 151 | 3300013297 | Ga0157378_10027818 | Ga0157378_100278183 | 928 |
| 152 | 3300003203 | JGI25406J46586_10000189 | JGI25406J46586_1000018912 | 929 |
| 153 | 3300005467 | Ga0070706_100000035 | Ga0070706_10000003595 | 929 |
| 154 | 3300005468 | Ga0070707_100002278 | Ga0070707_10000227818 | 929 |
| 155 | 3300005468 | Ga0070707_100010859 | Ga0070707_1000108596 | 929 |
| 156 | 3300005471 | Ga0070698_100004983 | Ga0070698_10000498314 | 929 |
| 157 | 3300005518 | Ga0070699_100045148 | Ga0070699_1000451481 | 929 |
| 158 | 3300005536 | Ga0070697_100026557 | Ga0070697_1000265573 | 929 |
| 159 | 3300005617 | Ga0068859_100032923 | Ga0068859_1000329232 | 929 |
| 160 | 3300005985 | Ga0081539_10000287 | Ga0081539_1000028760 | 929 |
| 161 | 3300006931 | Ga0097620_100032923 | Ga0097620_1000329232 | 929 |
| 162 | 3300025910 | Ga0207684_10000043 | Ga0207684_1000004327 | 929 |
| 163 | 3300025910 | Ga0207684_10004414 | Ga0207684_100044149 | 929 |
| 164 | 3300025922 | Ga0207646_10005562 | Ga0207646_1000556212 | 929 |
| 165 | 3300025922 | Ga0207646_10012526 | Ga0207646_100125266 | 929 |
| 166 | 3300036401 | Ga0373937_0002365 | Ga0373937_0002365_9766_12813 | 929 |
| 167 | 3300046529 | Ga0495652_0008016 | Ga0495652_0008016_5034_8081 | 929 |
| 168 | 3300053077 | Ga0495601_0013114 | Ga0495601_0013114_744_3791 | 929 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3bxz-assembly1.cif.gz_A | crystal structure of the isolated dead motor domains from escherichia coli seca | 0.8836 | 11 | 635 |
| 3bxz-assembly1.cif.gz_A | crystal structure of the isolated dead motor domains from escherichia coli seca | 0.8797 | 11 | 635 |
| 3dl8-assembly1.cif.gz_A | structure of the complex of aquifex aeolicus secyeg and bacillus subtilis seca | 0.8655 | 14 | 863 |
| 3dl8-assembly1.cif.gz_A | structure of the complex of aquifex aeolicus secyeg and bacillus subtilis seca | 0.8551 | 14 | 863 |
| 5eul-assembly1.cif.gz_A | structure of the seca-secy complex with a translocating polypeptide substrate | 0.8201 | 16 | 863 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A1D6MS70_87_296_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9528 | 20 | 250 | 3.40.50.300 |
| 1m74A03 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9487 | 488 | 654 | 3.40.50.300 |
| af_A0A1D6MS70_87_296_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.944 | 20 | 250 | 3.40.50.300 |
| 2ibmB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9401 | 14 | 487 | 3.40.50.300 |
| 2ibmB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9332 | 14 | 487 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2V5JYK1-F1-model_v4 | Preprotein translocase subunit SecA | 0.9879 | 1 | 201 |
GO:0005524
GO:0005829 GO:0005886 GO:0006605 GO:0006886 GO:0017038 GO:0031522 GO:0043952 |
| AF-A0A2V5JYK1-F1-model_v4 | Preprotein translocase subunit SecA | 0.9783 | 1 | 201 |
GO:0005524
GO:0005829 GO:0005886 GO:0006605 GO:0006886 GO:0017038 GO:0031522 GO:0043952 |
| AF-A0A6G0EWN3-F1-model_v4 | deleted | 0.9734 | 506 | 587 |
|
| AF-A0A3D6BUK6-F1-model_v4 | Preprotein translocase subunit SecA | 0.9689 | 65 | 238 |
GO:0005524
GO:0005829 GO:0005886 GO:0006605 GO:0006886 GO:0017038 GO:0031522 GO:0043952 |
| AF-A0A354U311-F1-model_v4 | deleted | 0.9681 | 476 | 580 |
|
Predicted Structure (AlphaFold2)
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