F251762

General Info

Members Datasets Scaffolds Average Seq Length
168 124 336 304

Family's Representative Sequence

Representative Sequence 3300003841|Ga0055541_1001385|Ga0055541_10013854
Length 322
Sequence MAALGWLCLIPAAVLLALYVRERMKQRSDRAALAYINAKLGEFTDPAQPLTQQRLLVMTRDPELRELLRGINALLDRAMQSAAGHKRTERAMRLMLSNVSHDLKTPLTVIMGYAEMLSRQEGLAEDELRRMLGQVHKKTVEVHELINAFFDLSRLEADDYDIPFAVVDACEVCRRRVLDYFDLLAEKDYQVDIRLPEEPAWVYANEEALSRILDNLLSNAVRYGAAGRYLGLSLSRGDGCVRIEVKDRGRGIAGIDQTRVFERMYTMEDSRNRHMQGSGLGLAIAKRLAERLGGRIELDSVPNVRTSFSLTLPASEYKPPQS

Samples

Sample ID Description Type Environment
1 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
5 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
6 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
7 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
8 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
9 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
10 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
11 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
12 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
13 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
14 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
15 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
16 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
17 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
18 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
19 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
23 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
24 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
25 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
26 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
27 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
28 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
29 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
30 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
31 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
32 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
33 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
34 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
35 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
36 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
37 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
38 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
39 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
40 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
41 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
42 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
43 2551306519 Bacillus sp. WBUNB004 Isolate Rhizosphere
44 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
45 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
46 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
47 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
48 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
49 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
50 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
51 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
52 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
53 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
54 2643221729 Bacillus sp. Root11 Isolate Unclassified
55 2643221730 Bacillus sp. Root131 Isolate Unclassified
56 2671180694 Paenibacillus sp. A3 Isolate Unclassified
57 2684622632 Bacillus cereus 905 Isolate Unclassified
58 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
59 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
60 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
61 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
62 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
63 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
64 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
65 2738541358 Bacillus sp. OV752 Isolate Unclassified
66 2738543006 Bacillus sp. OK077 Isolate Unclassified
67 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
68 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
69 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
70 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
71 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
72 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
73 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
74 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
75 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
76 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
77 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
78 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
79 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
80 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
81 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
82 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
83 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
84 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
85 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
86 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
87 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
88 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
89 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
90 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
91 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
92 2938917290 Bacillus sp. CR71 Isolate Unclassified
93 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
94 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
95 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
96 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
97 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
98 2965761152 Bacillus sp. COPE52 Isolate Unclassified
99 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
100 2969141011 Bacillus velezensis MH25 Isolate Unclassified
101 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
102 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
103 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
104 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
105 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
106 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
107 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
108 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
109 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
110 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
111 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
112 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
113 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
114 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified
115 8022792930 Bacillus sp. Xin Isolate Rhizosphere
116 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
117 8023438354 Bacillus sp. BH2 Isolate Unclassified
118 8023444577 Bacillus sp. BH32 Isolate Unclassified
119 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
120 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
121 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
122 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
123 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
124 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 49.4
Metatranscriptomes 0
Isolates 50.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.02
Nodule 1.79
Rhizoplane 0.6
Rhizosphere 35.12
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055541_1001385 3300003841 Bacteria 5262
2 JGI25159J45721_1004073 3300002987 Bacteria 4959
3 JGI25151J46595_10000216 3300003187 Bacteria 69532
4 JGI25151J46595_10001328 3300003187 Bacteria 17284
5 JGI25151J46595_10001695 3300003187 Bacteria 14374
6 JGI25151J46595_10006024 3300003187 Bacteria 6175
7 JGI25151J46595_10019767 3300003187 Bacteria 2853
8 JGI25151J46595_10025757 3300003187 Bacteria 2386
9 Ga0055538_1000843 3300003751 Bacteria 7971
10 Ga0055541_1005915 3300003841 Bacteria 2112
11 Ga0079104_1000270 3300006946 Bacteria 67899
12 Ga0105251_10064714 3300009011 Bacteria 1713
13 Ga0105244_10031064 3300009036 Bacteria 2837
14 Ga0105250_10014439 3300009092 Bacteria 3246
15 Ga0105250_10026725 3300009092 Bacteria 2326
16 Ga0105246_10007030 3300011119 Bacteria 6889
17 Ga0105246_10114051 3300011119 Bacteria 1990
18 Ga0209784_100317 3300025224 Bacteria 24989
19 Ga0209566_100070 3300025225 Bacteria 176023
20 Ga0209566_100135 3300025225 Bacteria 91038
21 Ga0209147_102177 3300025229 Bacteria 5345
22 Ga0209437_100295 3300025233 Bacteria 72055
23 Ga0209258_104302 3300025242 Bacteria 2744
24 Ga0209258_105906 3300025242 Bacteria 1990
25 Ga0209130_1001155 3300025284 Bacteria 19120
26 Ga0209130_1001819 3300025284 Bacteria 12358
27 Ga0209675_1005071 3300025291 Bacteria 5628
28 Ga0209675_1013736 3300025291 Bacteria 2510
29 Ga0209676_1001177 3300025292 Bacteria 28319
30 Ga0209676_1003512 3300025292 Bacteria 9586
31 Ga0209025_1000041 3300025294 Bacteria 373694
32 Ga0209025_1001090 3300025294 Bacteria 39279
33 Ga0209025_1002047 3300025294 Bacteria 22969
34 Ga0209025_1002076 3300025294 Bacteria 22750
35 Ga0209025_1002494 3300025294 Bacteria 19334
36 Ga0209025_1003397 3300025294 Bacteria 15165
37 Ga0209025_1004563 3300025294 Bacteria 11915
38 Ga0209025_1005634 3300025294 Bacteria 10105
39 Ga0209025_1007772 3300025294 Bacteria 7895
40 Ga0209025_1009332 3300025294 Bacteria 6863
41 Ga0209025_1014213 3300025294 Bacteria 4925
42 Ga0209025_1014331 3300025294 Bacteria 4887
43 Ga0209025_1021128 3300025294 Bacteria 3522
44 Ga0209025_1022862 3300025294 Bacteria 3295
45 Ga0207696_1004957 3300025711 Bacteria 5620
46 Ga0207696_1030405 3300025711 Bacteria 1641
47 Ga0207655_1009187 3300025728 Bacteria 6172
48 Ga0207713_1055851 3300025735 Bacteria 1538
49 Ga0209281_1000051 3300027111 Bacteria 319152
50 Ga0237817_10128 3300030083 Bacteria 23108
51 Ga0237817_10228 3300030083 Bacteria 14254
52 Ga0237819_00288 3300038705 Bacteria 18548
53 Ga0237819_00981 3300038705 Bacteria 8637
54 Ga0400483_165553 3300039062 Bacteria 4894
55 Ga0466967_0000037 3300045976 Bacteria 49418
56 Ga0495654_0105945 3300046530 Bacteria 1288
57 Ga0495660_0004645 3300046810 Bacteria 8285
58 Ga0495672_0036321 3300047320 Bacteria 3027
59 Ga0496116_0004878 3300048919 Bacteria 12655
60 Ga0496116_0008658 3300048919 Bacteria 8800
61 Ga0496116_0020775 3300048919 Bacteria 4974
62 Ga0496117_0016325 3300048920 Bacteria 6271
63 Ga0496119_0011164 3300048922 Bacteria 7479
64 Ga0496120_0006179 3300048923 Bacteria 9270
65 Ga0496121_0055744 3300048924 Bacteria 3290
66 Ga0496121_0093701 3300048924 Bacteria 2337
67 Ga0496121_0171437 3300048924 Bacteria 1575
68 Ga0496122_0025631 3300048925 Bacteria 5114
69 Ga0496122_0034908 3300048925 Bacteria 4105
70 Ga0496122_0035409 3300048925 Bacteria 4062
71 Ga0496122_0053663 3300048925 Bacteria 3036
72 Ga0496122_0107234 3300048925 Bacteria 1847
73 Ga0496122_0149094 3300048925 Bacteria 1447
74 Ga0496123_0060526 3300048926 Bacteria 2441
75 Ga0496123_0194925 3300048926 Bacteria 1044
76 Ga0496124_0018911 3300048927 Bacteria 6432
77 Ga0496124_0070384 3300048927 Bacteria 2902
78 Ga0496124_0123074 3300048927 Bacteria 2070
79 Ga0496125_0000472 3300048928 Bacteria 71418
80 Ga0496125_0038333 3300048928 Bacteria 4150
81 Ga0496125_0171787 3300048928 Bacteria 1456
82 Ga0496126_0001372 3300048929 Bacteria 38498
83 Ga0496126_0005383 3300048929 Bacteria 14615
84 2524188028 2524023129 Bacteria 6762600
85 2545557781 2545555800 Bacteria 4222588
86 2550900562 2548877040 Bacteria 7507281
87 2553395132 2551306519 Bacteria 5465154
88 2563928066 2563366752 Bacteria 4961801
89 2571528355 2571042143 Bacteria 6986194
90 2578339388 2576861424 Bacteria 5270569
91 2578932171 2576861599 Bacteria 4217202
92 2580930991 2579778775 Bacteria 5360914
93 2595091162 2593339131 Bacteria 5116855
94 2601637103 2600255286 Bacteria 5390125
95 2621277860 2619619294 Bacteria 5575484
96 2631983325 2630968484 Bacteria 3876276
97 2643736734 2643221543 Bacteria 6628015
98 2644706485 2643221729 Bacteria 6621700
99 2644713166 2643221730 Bacteria 6523787
100 2673818315 2671180694 Bacteria 7506943
101 2685152503 2684622632 Bacteria 5380049
102 2698320666 2695420987 Bacteria 6152737
103 2705996427 2703719227 Bacteria 5631989
104 2717914846 2716884898 Bacteria 3928789
105 2721507660 2718218445 Bacteria 5113413
106 2723602806 2721755693 Bacteria 6126117
107 2728532923 2728368933 Bacteria 7044283
108 2730138784 2728369359 Bacteria 5621728
109 2739157709 2738541358 Bacteria 5932299
110 2739209800 2738543006 Bacteria 5904091
111 2753809512 2751185905 Bacteria 6142767
112 2777760664 2775507177 Bacteria 4384303
113 2791211585 2788500588 Bacteria 4584915
114 2802436661 2802428803 Bacteria 5806948
115 2819581418 2818991443 Bacteria 6598732
116 2821117827 2821111986 Bacteria 6894338
117 2857458662 2857453340 Bacteria 8090534
118 2864735839 2864733723 Bacteria 6770668
119 2881638967 2881636855 Bacteria 5205297
120 2885528130 2885526491 Bacteria 7164189
121 2889047871 2889042446 Bacteria 7618936
122 2889278767 2889276214 Bacteria 5979355
123 2904116061 2904113452 Bacteria 7796941
124 2904167015 2904162308 Bacteria 7086713
125 2904496178 2904490793 Bacteria 7046938
126 2904561833 2904560550 Bacteria 4029838
127 2904598642 2904595352 Bacteria 6124848
128 2904609192 2904606771 Bacteria 4684500
129 2907204796 2907202186 Bacteria 6632024
130 2915602248 2915597211 Bacteria 6475886
131 2919165472 2919160200 Bacteria 6929020
132 2929238205 2929233124 Bacteria 5948380
133 2931384980 2931384279 Bacteria 7299545
134 2936345039 2936340661 Bacteria 5139038
135 2938650643 2938649242 Bacteria 7118381
136 2938922395 2938917290 Bacteria 5914775
137 2939595557 2939593269 Bacteria 4798695
138 2939685303 2939679117 Bacteria 6921672
139 2945996406 2945991243 Bacteria 7008369
140 2946059093 2946053406 Bacteria 6978655
141 2947431286 2947426588 Bacteria 5357194
142 2965765965 2965761152 Bacteria 5806513
143 2968559835 2968558590 Bacteria 6956864
144 2969144956 2969141011 Bacteria 4118468
145 2971405106 2971403814 Bacteria 7370929
146 2971414789 2971410472 Bacteria 8311090
147 2971514011 2971511577 Bacteria 5404012
148 2971897080 2971893375 Bacteria 3929648
149 2979088191 2979083700 Bacteria 5894929
150 2980178774 2980176882 Bacteria 5397533
151 2980185782 2980182181 Bacteria 9454109
152 2988225541 2988225383 Bacteria 7221625
153 2996634791 2996632988 Bacteria 6921523
154 2996712267 2996706504 Bacteria 5757485
155 3006981018 3006978542 Bacteria 5328100
156 648169139 648028048 Bacteria 5394884
157 8002318430 8002317523 Bacteria 8051857
158 8007379954 8007375930 Bacteria 4080554
159 8022797124 8022792930 Bacteria 5693794
160 8022953661 8022948649 Bacteria 5366783
161 8023443782 8023438354 Bacteria 5779374
162 8023445399 8023444577 Bacteria 5661597
163 8052175931 8052174270 Bacteria 3881265
164 8055532080 8055531788 Bacteria 5249694
165 8055636766 8055632911 Bacteria 5283357
166 8056539360 8056533031 Bacteria 8964429
167 8057476505 8057473075 Bacteria 5892720
168 8057586958 8057582654 Bacteria 5218944
169 Ga0055541_1001385
170 JGI25159J45721_1004073
171 JGI25151J46595_10000216
172 JGI25151J46595_10001328
173 JGI25151J46595_10001695
174 JGI25151J46595_10006024
175 JGI25151J46595_10019767
176 JGI25151J46595_10025757
177 Ga0055538_1000843
178 Ga0055541_1005915
179 Ga0079104_1000270
180 Ga0105251_10064714
181 Ga0105244_10031064
182 Ga0105250_10014439
183 Ga0105250_10026725
184 Ga0105246_10007030
185 Ga0105246_10114051
186 Ga0209784_100317
187 Ga0209566_100070
188 Ga0209566_100135
189 Ga0209147_102177
190 Ga0209437_100295
191 Ga0209258_104302
192 Ga0209258_105906
193 Ga0209130_1001155
194 Ga0209130_1001819
195 Ga0209675_1005071
196 Ga0209675_1013736
197 Ga0209676_1001177
198 Ga0209676_1003512
199 Ga0209025_1000041
200 Ga0209025_1001090
201 Ga0209025_1002047
202 Ga0209025_1002076
203 Ga0209025_1002494
204 Ga0209025_1003397
205 Ga0209025_1004563
206 Ga0209025_1005634
207 Ga0209025_1007772
208 Ga0209025_1009332
209 Ga0209025_1014213
210 Ga0209025_1014331
211 Ga0209025_1021128
212 Ga0209025_1022862
213 Ga0207696_1004957
214 Ga0207696_1030405
215 Ga0207655_1009187
216 Ga0207713_1055851
217 Ga0209281_1000051
218 Ga0237817_10128
219 Ga0237817_10228
220 Ga0237819_00288
221 Ga0237819_00981
222 Ga0400483_165553
223 Ga0466967_0000037
224 Ga0495654_0105945
225 Ga0495660_0004645
226 Ga0495672_0036321
227 Ga0496116_0004878
228 Ga0496116_0008658
229 Ga0496116_0020775
230 Ga0496117_0016325
231 Ga0496119_0011164
232 Ga0496120_0006179
233 Ga0496121_0055744
234 Ga0496121_0093701
235 Ga0496121_0171437
236 Ga0496122_0025631
237 Ga0496122_0034908
238 Ga0496122_0035409
239 Ga0496122_0053663
240 Ga0496122_0107234
241 Ga0496122_0149094
242 Ga0496123_0060526
243 Ga0496123_0194925
244 Ga0496124_0018911
245 Ga0496124_0070384
246 Ga0496124_0123074
247 Ga0496125_0000472
248 Ga0496125_0038333
249 Ga0496125_0171787
250 Ga0496126_0001372
251 Ga0496126_0005383
252 2524188028
253 2545557781
254 2550900562
255 2553395132
256 2563928066
257 2571528355
258 2578339388
259 2578932171
260 2580930991
261 2595091162
262 2601637103
263 2621277860
264 2631983325
265 2643736734
266 2644706485
267 2644713166
268 2673818315
269 2685152503
270 2698320666
271 2705996427
272 2717914846
273 2721507660
274 2723602806
275 2728532923
276 2730138784
277 2739157709
278 2739209800
279 2753809512
280 2777760664
281 2791211585
282 2802436661
283 2819581418
284 2821117827
285 2857458662
286 2864735839
287 2881638967
288 2885528130
289 2889047871
290 2889278767
291 2904116061
292 2904167015
293 2904496178
294 2904561833
295 2904598642
296 2904609192
297 2907204796
298 2915602248
299 2919165472
300 2929238205
301 2931384980
302 2936345039
303 2938650643
304 2938922395
305 2939595557
306 2939685303
307 2945996406
308 2946059093
309 2947431286
310 2965765965
311 2968559835
312 2969144956
313 2971405106
314 2971414789
315 2971514011
316 2971897080
317 2979088191
318 2980178774
319 2980185782
320 2988225541
321 2996634791
322 2996712267
323 3006981018
324 648169139
325 8002318430
326 8007379954
327 8022797124
328 8022953661
329 8023443782
330 8023445399
331 8052175931
332 8055532080
333 8055636766
334 8056539360
335 8057476505
336 8057586958

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

204

316

0.95

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

91

158

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
8dx0-assembly2.cif.gz_B vansc ca domain 0.9048 159 309
8dwz-assembly1.cif.gz_A ca domain of vansa histidine kinase, 7 kev data 0.8945 159 309
3a0z-assembly1.cif.gz_A catalytic domain of histidine kinase thka (tm1359) (nucleotide free form 4: isopropanol, orthorombic) 0.8928 157 308
8dx0-assembly2.cif.gz_B vansc ca domain 0.8926 159 309
8dwz-assembly1.cif.gz_A ca domain of vansa histidine kinase, 7 kev data 0.8882 159 309
ID Description Score Start End Superfamily
af_P14377_310_462_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9054 157 307 3.30.565.10
4q20B02 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9053 157 307 3.30.565.10
4u7oB01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.9052 89 147 1.10.287.130
4u7nA01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.9042 91 152 1.10.287.130
4biyC02 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.8916 158 311 3.30.565.10
ID Description Score Start End GO Terms
AF-A0A1S2LQY9-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.896 70 307 GO:0000155
GO:0005524
GO:0006355
AF-A0A7V3DFD3-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.896 142 310 GO:0016301
AF-A0A2V9H3V6-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8956 159 310 GO:0016301
AF-A0A7C9K7F0-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8922 79 311 GO:0000155
GO:0004721
GO:0005886
GO:0016036
AF-A0A2V8L9V6-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8873 157 306 GO:0016772

Map