F251525

General Info

Members Datasets Scaffolds Average Seq Length
167 139 334 448

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221613|2644083307
Length 510
Sequence MDLFDAATSGTQGTPRPGPGSPLAVRMRPAALEEVAGQEHLLVAGSPLRRLIDVDGPGASRAAPGSVILWGPPGTGKTTLAYLIASTSGRRFVELSAVTAGVKDVRQVIDDARRRLATGGEETVLFIDEVHRFSKSQQDALLPSVENRWVTLVAATTENPSFSVNSPLLSRSLLLTLKPLTSGDVRALVRRALMDERGLGGAVTLAEEAEEHLVRLAGGDARKALTILEAAAGAALSEVPDAPVRTTGPDDDAPDPGDAVGPAGTDGPGEGTDAPDNAGDDGPEPAETAEAPASTRPSGTVVVDLETMERAIDVAAVRYDRDGDQHYDVTSAFIKSVRGSDVDASLHYLARMIAAGEDPRFIARRIVISAAEDVGMADPSALQTAVAAAQAVALIGMPEARIILAEAVVHLATAPKSNAAYLGIDAALADVRAGKVGTVPAHLRDAHYAGAKELGHGKGYKYAHDAPHAVARQQYLPDVLQGTRYYTPTDRGFERSVTERLERIRQILGE

Samples

Sample ID Description Type Environment
1 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
8 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
9 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
10 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
14 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
17 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
19 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
21 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
22 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
23 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
24 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
25 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
26 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
27 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
28 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
36 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
37 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
38 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
39 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
40 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
41 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
42 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
43 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
44 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
45 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
46 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
47 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
48 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
49 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
50 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
51 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
52 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
53 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
54 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
55 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
56 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
57 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
58 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
59 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
60 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
61 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
62 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
63 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
64 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
65 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
66 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
67 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
68 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
69 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
70 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
71 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
72 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
73 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
81 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
82 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
83 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
84 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
85 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
86 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
87 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
88 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
89 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
90 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
91 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
92 2643221613 Oerskovia sp. Root22 Isolate Unclassified
93 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
94 2643221553 Microbacterium sp. Root553 Isolate Unclassified
95 2643221575 Microbacterium sp. Root61 Isolate Unclassified
96 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
97 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
98 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
99 2643221721 Oerskovia sp. Root918 Isolate Unclassified
100 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
101 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
102 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
103 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
104 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
105 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
106 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
107 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
108 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
109 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
110 2808606372 Agromyces sp. 23-23 Isolate Unclassified
111 2808606394 Promicromonospora sp. C35 Isolate Unclassified
112 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
113 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
114 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
115 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
116 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
117 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
118 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
119 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
120 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
121 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
122 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
123 2867369537 Streptomyces sp. Z26 Isolate Unclassified
124 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
125 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
126 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
127 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
128 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
129 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
130 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
131 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
132 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
133 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
134 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
135 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
136 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
137 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
138 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere
139 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.66
Metatranscriptomes 0.6
Isolates 28.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.4
Nodule 0
Rhizoplane 5.99
Rhizosphere 56.89
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065704_10074543 3300005289 Bacteria 6196
2 Ga0070683_100041151 3300005329 Bacteria 4249
3 Ga0070667_100024292 3300005367 Bacteria 5034
4 Ga0070714_100000150 3300005435 Bacteria 55789
5 Ga0070694_100004415 3300005444 Bacteria 8457
6 Ga0070698_100042947 3300005471 Bacteria 4636
7 Ga0070698_100094285 3300005471 Bacteria 2973
8 Ga0070699_100001849 3300005518 Bacteria 19202
9 Ga0070697_100059447 3300005536 Bacteria 3113
10 Ga0070696_100000675 3300005546 Bacteria 21873
11 Ga0070696_100118566 3300005546 Bacteria 1913
12 Ga0070704_100000070 3300005549 Bacteria 33970
13 Ga0068857_100036598 3300005577 Bacteria 4349
14 Ga0068859_100077910 3300005617 Bacteria 3356
15 Ga0081540_1032745 3300005983 Bacteria 2833
16 Ga0070717_10000342 3300006028 Bacteria 30046
17 Ga0075428_100005366 3300006844 Bacteria 14247
18 Ga0075429_100060235 3300006880 Bacteria 3307
19 Ga0097620_100077911 3300006931 Bacteria 3356
20 Ga0075435_100014963 3300007076 Bacteria 5819
21 Ga0114129_10005941 3300009147 Bacteria 17277
22 Ga0114129_10010261 3300009147 Bacteria 13364
23 Ga0105248_10012121 3300009177 Bacteria 9513
24 Ga0105249_10304610 3300009553 Bacteria 1599
25 Ga0157369_10027600 3300013105 Bacteria 6290
26 Ga0157375_10037890 3300013308 Bacteria 4625
27 Ga0157375_10146832 3300013308 Bacteria 2490
28 Ga0163163_10028408 3300014325 Bacteria 5370
29 Ga0157380_10010093 3300014326 Bacteria 6781
30 Ga0206353_12001878 3300020082 Bacteria 2910
31 Ga0213875_10001914 3300021388 Bacteria 12891
32 Ga0207684_10011827 3300025910 Bacteria 7608
33 Ga0207664_10000010 3300025929 Bacteria 298623
34 Ga0207709_10095156 3300025935 Bacteria 1956
35 Ga0207691_10050141 3300025940 Bacteria 3822
36 Ga0207711_10008546 3300025941 Bacteria 8564
37 Ga0207711_10021478 3300025941 Bacteria 5393
38 Ga0207668_10064594 3300025972 Bacteria 2587
39 Ga0207674_10047135 3300026116 Bacteria 4420
40 Ga0307511_10050229 3300030521 Bacteria 3362
41 Ga0395899_0000390 3300037312 Bacteria 52344
42 Ga0395899_0045642 3300037312 Bacteria 3265
43 Ga0395898_0055376 3300037466 Bacteria 3868
44 Ga0436364_0846682 3300037853 Bacteria 27024
45 Ga0395901_0065994 3300038443 Bacteria 3769
46 Ga0395901_0123000 3300038443 Bacteria 2727
47 Ga0451791_1308034 3300041451 Bacteria 2655
48 Ga0451833_0377646 3300041491 Bacteria 11656
49 Ga0466966_0017331 3300044684 Bacteria 4759
50 Ga0495592_0019318 3300046454 Bacteria 5184
51 Ga0495651_0004156 3300046462 Bacteria 11089
52 Ga0495664_0122880 3300046477 Bacteria 1570
53 Ga0495618_0133315 3300046514 Bacteria 1589
54 Ga0495628_0012086 3300046516 Bacteria 7280
55 Ga0495644_0021540 3300046523 Bacteria 2459
56 Ga0495652_0002224 3300046529 Bacteria 20340
57 Ga0495609_0041675 3300046538 Bacteria 2063
58 Ga0495645_0048595 3300046543 Bacteria 3089
59 Ga0495645_0149119 3300046543 Bacteria 1626
60 Ga0495635_0003745 3300046663 Bacteria 10552
61 Ga0495659_0000309 3300046664 Bacteria 19456
62 Ga0495646_0027746 3300046680 Bacteria 3549
63 Ga0495674_0181806 3300047319 Bacteria 1751
64 Ga0495675_0006265 3300047444 Bacteria 7281
65 Ga0496102_0110053 3300048905 Bacteria 2567
66 Ga0496104_0061667 3300048907 Bacteria 3555
67 Ga0496105_0044863 3300048908 Bacteria 3647
68 Ga0496109_0014989 3300048912 Bacteria 6746
69 Ga0496109_0042894 3300048912 Bacteria 4100
70 Ga0496109_0073226 3300048912 Bacteria 3148
71 Ga0496113_0056288 3300048916 Bacteria 2952
72 Ga0496114_0047388 3300048917 Bacteria 3575
73 Ga0496114_0174799 3300048917 Bacteria 1873
74 Ga0496117_0000128 3300048920 Bacteria 166039
75 Ga0496117_0001311 3300048920 Bacteria 36601
76 Ga0496117_0015785 3300048920 Bacteria 6411
77 Ga0496118_0029910 3300048921 Bacteria 4558
78 Ga0496118_0060504 3300048921 Bacteria 2812
79 Ga0496119_0071950 3300048922 Bacteria 2022
80 Ga0496120_0050448 3300048923 Bacteria 2383
81 Ga0496121_0000040 3300048924 Bacteria 348494
82 Ga0496122_0000275 3300048925 Bacteria 114580
83 Ga0496122_0003597 3300048925 Bacteria 20193
84 Ga0496122_0004129 3300048925 Bacteria 18364
85 Ga0496123_0000166 3300048926 Bacteria 131527
86 Ga0496123_0004022 3300048926 Bacteria 15889
87 Ga0496123_0015397 3300048926 Bacteria 6274
88 Ga0496123_0020814 3300048926 Bacteria 5118
89 Ga0496123_0025889 3300048926 Bacteria 4409
90 Ga0496124_0000205 3300048927 Bacteria 116897
91 Ga0496124_0002802 3300048927 Bacteria 22087
92 Ga0496125_0003772 3300048928 Bacteria 18023
93 Ga0496125_0094520 3300048928 Bacteria 2227
94 Ga0496126_0006747 3300048929 Bacteria 12742
95 Ga0501032_0002376 3300049569 Bacteria 14697
96 Ga0501032_0100585 3300049569 Bacteria 1915
97 Ga0501033_0006378 3300049570 Bacteria 9241
98 Ga0501034_0006008 3300049571 Bacteria 13131
99 Ga0501034_0024952 3300049571 Bacteria 6082
100 Ga0501038_0002723 3300049574 Bacteria 16479
101 Ga0501043_0063554 3300049579 Bacteria 2899
102 Ga0501046_0003359 3300049580 Bacteria 14700
103 Ga0501047_0003329 3300049581 Bacteria 15221
104 Ga0501047_0020223 3300049581 Bacteria 6393
105 Ga0501047_0146467 3300049581 Bacteria 2238
106 Ga0501070_0027401 3300049586 Bacteria 4780
107 Ga0501081_0020425 3300049743 Bacteria 4415
108 Ga0501083_0008320 3300049744 Bacteria 7337
109 Ga0501035_0019279 3300049822 Bacteria 6279
110 nmdc:mga05p37_2339_c1 3300050507 Bacteria 22050
111 Ga0495612_0001187 3300053078 Bacteria 10741
112 Ga0495619_0033455 3300053085 Bacteria 3339
113 Ga0500643_003816 3300053087 Bacteria 7035
114 Ga0500616_0000021 3300053153 Bacteria 484527
115 Ga0500616_0002491 3300053153 Bacteria 15255
116 Ga0500645_006194 3300053730 Bacteria 4298
117 Ga0501084_0125559 3300054114 Bacteria 2159
118 Ga0501082_0027903 3300060353 Bacteria 4862
119 Ga0501082_0039438 3300060353 Bacteria 4073
120 2644083307 2643221613 Bacteria 4622396
121 2587862900 2585428094 Bacteria 3604039
122 2643785774 2643221553 Bacteria 3544260
123 2643885537 2643221575 Bacteria 4022601
124 2644199236 2643221635 Bacteria 2632343
125 2644503814 2643221690 Bacteria 4654705
126 2644527116 2643221694 Bacteria 4392972
127 2644666409 2643221721 Bacteria 4486924
128 2644670155 2643221722 Bacteria 4247614
129 2644680186 2643221724 Bacteria 3593515
130 2730229636 2728369380 Bacteria 3620317
131 2738695657 2738541272 Bacteria 6848551
132 2739326199 2738543027 Bacteria 6409078
133 2739604958 2739367654 Bacteria 6049412
134 2747951972 2747842429 Bacteria 3914386
135 2760308133 2758568522 Bacteria 5953541
136 2760623275 2758568621 Bacteria 5967089
137 2772643582 2772190715 Bacteria 6959372
138 2808901940 2808606372 Bacteria 4649509
139 2809028165 2808606394 Bacteria 6248540
140 2812323035 2811994872 Bacteria 4121241
141 2812365238 2811994880 Bacteria 4147780
142 2833710879 2833709550 Bacteria 4008291
143 2835188580 2835188231 Bacteria 3476928
144 2839986605 2839986021 Bacteria 3685650
145 2844855546 2844852863 Bacteria 3849151
146 2855680554 2855676851 Bacteria 7063653
147 2858851308 2858848962 Bacteria 6963058
148 2858890912 2858888857 Bacteria 7060307
149 2858899416 2858895516 Bacteria 7378898
150 2862708798 2862705112 Bacteria 6563286
151 2867369853 2867369537 Bacteria 6501581
152 2869051210 2869048445 Bacteria 6875584
153 2869062057 2869061728 Bacteria 7112407
154 2875392691 2875391855 Bacteria 7600475
155 2884995562 2884994152 Bacteria 4492978
156 2919446282 2919443155 Bacteria 4072969
157 2928122991 2928121344 Bacteria 3972376
158 2932431949 2932431166 Bacteria 4215299
159 2935891001 2935890801 Bacteria 4593001
160 2995469359 2995463766 Bacteria 8577691
161 8008486565 8008485437 Bacteria 7198341
162 8025480368 8025478263 Bacteria 8209203
163 8025525634 8025524527 Bacteria 7197316
164 8045831507 8045830549 Bacteria 4444727
165 8056037461 8056037122 Bacteria 3854319
166 8056582198 8056579771 Bacteria 5840325
167 8057348777 8057345674 Bacteria 4160394
168 Ga0065704_10074543
169 Ga0070683_100041151
170 Ga0070667_100024292
171 Ga0070714_100000150
172 Ga0070694_100004415
173 Ga0070698_100042947
174 Ga0070698_100094285
175 Ga0070699_100001849
176 Ga0070697_100059447
177 Ga0070696_100000675
178 Ga0070696_100118566
179 Ga0070704_100000070
180 Ga0068857_100036598
181 Ga0068859_100077910
182 Ga0081540_1032745
183 Ga0070717_10000342
184 Ga0075428_100005366
185 Ga0075429_100060235
186 Ga0097620_100077911
187 Ga0075435_100014963
188 Ga0114129_10005941
189 Ga0114129_10010261
190 Ga0105248_10012121
191 Ga0105249_10304610
192 Ga0157369_10027600
193 Ga0157375_10037890
194 Ga0157375_10146832
195 Ga0163163_10028408
196 Ga0157380_10010093
197 Ga0206353_12001878
198 Ga0213875_10001914
199 Ga0207684_10011827
200 Ga0207664_10000010
201 Ga0207709_10095156
202 Ga0207691_10050141
203 Ga0207711_10008546
204 Ga0207711_10021478
205 Ga0207668_10064594
206 Ga0207674_10047135
207 Ga0307511_10050229
208 Ga0395899_0000390
209 Ga0395899_0045642
210 Ga0395898_0055376
211 Ga0436364_0846682
212 Ga0395901_0065994
213 Ga0395901_0123000
214 Ga0451791_1308034
215 Ga0451833_0377646
216 Ga0466966_0017331
217 Ga0495592_0019318
218 Ga0495651_0004156
219 Ga0495664_0122880
220 Ga0495618_0133315
221 Ga0495628_0012086
222 Ga0495644_0021540
223 Ga0495652_0002224
224 Ga0495609_0041675
225 Ga0495645_0048595
226 Ga0495645_0149119
227 Ga0495635_0003745
228 Ga0495659_0000309
229 Ga0495646_0027746
230 Ga0495674_0181806
231 Ga0495675_0006265
232 Ga0496102_0110053
233 Ga0496104_0061667
234 Ga0496105_0044863
235 Ga0496109_0014989
236 Ga0496109_0042894
237 Ga0496109_0073226
238 Ga0496113_0056288
239 Ga0496114_0047388
240 Ga0496114_0174799
241 Ga0496117_0000128
242 Ga0496117_0001311
243 Ga0496117_0015785
244 Ga0496118_0029910
245 Ga0496118_0060504
246 Ga0496119_0071950
247 Ga0496120_0050448
248 Ga0496121_0000040
249 Ga0496122_0000275
250 Ga0496122_0003597
251 Ga0496122_0004129
252 Ga0496123_0000166
253 Ga0496123_0004022
254 Ga0496123_0015397
255 Ga0496123_0020814
256 Ga0496123_0025889
257 Ga0496124_0000205
258 Ga0496124_0002802
259 Ga0496125_0003772
260 Ga0496125_0094520
261 Ga0496126_0006747
262 Ga0501032_0002376
263 Ga0501032_0100585
264 Ga0501033_0006378
265 Ga0501034_0006008
266 Ga0501034_0024952
267 Ga0501038_0002723
268 Ga0501043_0063554
269 Ga0501046_0003359
270 Ga0501047_0003329
271 Ga0501047_0020223
272 Ga0501047_0146467
273 Ga0501070_0027401
274 Ga0501081_0020425
275 Ga0501083_0008320
276 Ga0501035_0019279
277 nmdc:mga05p37_2339_c1
278 Ga0495612_0001187
279 Ga0495619_0033455
280 Ga0500643_003816
281 Ga0500616_0000021
282 Ga0500616_0002491
283 Ga0500645_006194
284 Ga0501084_0125559
285 Ga0501082_0027903
286 Ga0501082_0039438
287 2644083307
288 2587862900
289 2643785774
290 2643885537
291 2644199236
292 2644503814
293 2644527116
294 2644666409
295 2644670155
296 2644680186
297 2730229636
298 2738695657
299 2739326199
300 2739604958
301 2747951972
302 2760308133
303 2760623275
304 2772643582
305 2808901940
306 2809028165
307 2812323035
308 2812365238
309 2833710879
310 2835188580
311 2839986605
312 2844855546
313 2855680554
314 2858851308
315 2858890912
316 2858899416
317 2862708798
318 2867369853
319 2869051210
320 2869062057
321 2875392691
322 2884995562
323 2919446282
324 2928122991
325 2932431949
326 2935891001
327 2995469359
328 8008486565
329 8025480368
330 8025525634
331 8045831507
332 8056037461
333 8056582198
334 8057348777

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12002

MgsA_C

MgsA AAA+ ATPase C terminal

339

505

0.99

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

67

179

0.88

PF14532

Sigma54_activ_2

Sigma-54 interaction domain

59

182

0.86

PF16193

AAA_assoc_2

AAA C-terminal domain

285

338

0.86

PF07728

AAA_5

AAA domain (dynein-related subfamily)

66

191

0.78

PF05496

RuvB_N

Holliday junction DNA helicase RuvB P-loop domain

27

173

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
8g28-assembly1.cif.gz_A crystal structure of the c-terminal fragment of aaa atpase from streptococcus pneumoniae. 0.9644 238 342
2r9g-assembly5.cif.gz_I crystal structure of the c-terminal fragment of aaa atpase from enterococcus faecium 0.9343 238 420
2r9g-assembly3.cif.gz_L crystal structure of the c-terminal fragment of aaa atpase from enterococcus faecium 0.9261 231 420
3ctd-assembly1.cif.gz_B-2 crystal structure of a putative aaa family atpase from prochlorococcus marinus subsp. pastoris 0.9218 238 411
8g28-assembly1.cif.gz_A crystal structure of the c-terminal fragment of aaa atpase from streptococcus pneumoniae. 0.9215 238 342
ID Description Score Start End Superfamily
af_A0A1D8PCY7_414_516_1.20.272.10 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9841 231 328 1.20.272.10
af_I1M653_358_461_1.20.272.10 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.982 228 328 1.20.272.10
af_Q8IIN7_541_638_1.20.272.10 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9675 231 330 1.20.272.10
af_P9WQN1_21_178_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9648 1 145 3.40.50.300
af_Q91XU0_212_374_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9619 1 144 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7C6XWJ9-F1-model_v4 AAA family ATPase 0.9822 1 221 GO:0000731
GO:0005524
GO:0006261
GO:0006310
GO:0008047
GO:0009378
GO:0016887
GO:0017116
AF-A0A7V4IK19-F1-model_v4 AAA family ATPase 0.9788 1 136 GO:0000731
GO:0005524
GO:0006261
GO:0008047
GO:0016887
GO:0017116
AF-A0A1W9L9Y6-F1-model_v4 AAA family ATPase 0.9756 1 194 GO:0000731
GO:0005524
GO:0006261
GO:0006310
GO:0008047
GO:0009378
GO:0016887
GO:0017116
AF-A0A7K1AYB6-F1-model_v4 AAA family ATPase 0.9752 2 148 GO:0000731
GO:0005524
GO:0006261
GO:0008047
GO:0016887
GO:0017116
AF-A0A837RQ25-F1-model_v4 deleted 0.974 250 422

Map