F251312

General Info

Members Datasets Scaffolds Average Seq Length
167 106 166 228

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0023355|Ga0501032_0023355_172_987
Length 264
Sequence MSGCFPGLKKFPGPKFLGRLLFEFLSFAASASQRYAQTKKESKLTMKTTYYGHSCFSVEIAGKHLLFDPFITPNPLAASIDIKKLAADFILVSHGHVDHVADVVEIAKRTNALVVANFEVANWLGKQGAPKLQPMNHGGSVKLDFGRVKFVNAVHSSTLPDGSFVVESSEGNFYYSGDTALTMDMKLIGESTKLKFAALCVGDNFTMGPDDAVKAAAFVECDQILGVHYDTFPPIKIDHAAAKEKFRAVNKTLHLLRPGETVNF

Samples

Sample ID Description Type Environment
1 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
2 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
27 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
30 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
52 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
53 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
54 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
55 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
56 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
57 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
58 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
59 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
62 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
63 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
64 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
65 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
66 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
67 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
68 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
69 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
70 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
71 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
72 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
73 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
74 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
75 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
78 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
79 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
80 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
81 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
82 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
83 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
84 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
85 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
86 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
87 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
88 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
89 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
90 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
91 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
92 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
103 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
105 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
106 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.4
Metatranscriptomes 0
Isolates 0.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.2
Nodule 0
Rhizoplane 0
Rhizosphere 94.01
Stem 0
Stem Tuber 0
Unclassified 4.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24033J26618_1000307 3300002155 Bacteria 5236
2 rootH2_10204905 3300003320 Unclassified 2332
3 rootH2_10254018 3300003320 Bacteria 1623
4 rootL2_10134356 3300003322 Bacteria 1362
5 rootL2_10302359 3300003322 Bacteria 1191
6 Ga0065704_10243003 3300005289 Bacteria 1010
7 Ga0070683_100435716 3300005329 Unclassified 1251
8 Ga0070690_100131409 3300005330 Bacteria 1691
9 Ga0068868_100189014 3300005338 Bacteria 1712
10 Ga0070689_100243998 3300005340 Bacteria 1480
11 Ga0070691_10098759 3300005341 Bacteria 1448
12 Ga0070675_100336234 3300005354 Bacteria 1337
13 Ga0070714_100079628 3300005435 Bacteria 2849
14 Ga0070714_100130608 3300005435 Bacteria 2245
15 Ga0070713_100210261 3300005436 Viruses 1761
16 Ga0070708_100087252 3300005445 Unclassified 2835
17 Ga0070681_10019854 3300005458 Bacteria 6732
18 Ga0070681_10185134 3300005458 Bacteria 2003
19 Ga0068867_100808154 3300005459 Bacteria 837
20 Ga0070704_100463279 3300005549 Bacteria 1094
21 Ga0068855_100157075 3300005563 Bacteria 2583
22 Ga0068855_100181048 3300005563 Bacteria 2382
23 Ga0068855_100294089 3300005563 Bacteria 1800
24 Ga0068855_100723806 3300005563 Unclassified 1063
25 Ga0068856_100025133 3300005614 Bacteria 5803
26 Ga0068863_100327010 3300005841 Bacteria 1490
27 Ga0068860_100928420 3300005843 Bacteria 887
28 Ga0081455_10157016 3300005937 Unclassified 1747
29 Ga0068871_100218094 3300006358 Bacteria 1652
30 Ga0068871_100294799 3300006358 Bacteria 1422
31 Ga0105240_10000271 3300009093 Bacteria 102442
32 Ga0105240_10035190 3300009093 Bacteria 6455
33 Ga0105240_10211665 3300009093 Bacteria 2265
34 Ga0105240_10360438 3300009093 Bacteria 1647
35 Ga0105240_10481117 3300009093 Unclassified 1384
36 Ga0105240_10702800 3300009093 Unclassified 1103
37 Ga0105240_10910680 3300009093 Unclassified 945
38 Ga0105248_10277178 3300009177 Unclassified 1888
39 Ga0157373_10244116 3300013100 Bacteria 1270
40 Ga0157371_10433973 3300013102 Bacteria 964
41 Ga0157370_10331969 3300013104 Bacteria 1402
42 Ga0157370_10411721 3300013104 Unclassified 1244
43 Ga0157374_10142131 3300013296 Bacteria 2330
44 Ga0157378_10028677 3300013297 Bacteria 4913
45 Ga0157378_10318291 3300013297 Unclassified 1511
46 Ga0163162_10674384 3300013306 Bacteria 1157
47 Ga0157372_10416474 3300013307 Bacteria 1566
48 Ga0157372_10483051 3300013307 Bacteria 1444
49 Ga0157372_11003317 3300013307 Bacteria 967
50 Ga0157375_10074533 3300013308 Bacteria 3415
51 Ga0157375_10355318 3300013308 Bacteria 1631
52 Ga0157380_10000133 3300014326 Bacteria 41543
53 Ga0213876_10009756 3300021384 Bacteria 5167
54 Ga0207680_10045145 3300025903 Bacteria 2596
55 Ga0207699_10428234 3300025906 Unclassified 946
56 Ga0207707_10022088 3300025912 Bacteria 5562
57 Ga0207695_10085303 3300025913 Bacteria 3187
58 Ga0207695_10104965 3300025913 Bacteria 2813
59 Ga0207695_10173620 3300025913 Bacteria 2079
60 Ga0207695_10298369 3300025913 Unclassified 1503
61 Ga0207695_10616122 3300025913 Unclassified 966
62 Ga0207693_10430413 3300025915 Bacteria 1031
63 Ga0207694_10166112 3300025924 Unclassified 1785
64 Ga0207664_10100727 3300025929 Bacteria 2386
65 Ga0207670_10213883 3300025936 Bacteria 1472
66 Ga0207711_10207489 3300025941 Unclassified 1789
67 Ga0207667_10104897 3300025949 Bacteria 2916
68 Ga0207667_10938852 3300025949 Unclassified 855
69 Ga0207702_10132882 3300026078 Unclassified 2241
70 Ga0207641_10284315 3300026088 Bacteria 1557
71 Ga0207648_10326370 3300026089 Bacteria 1380
72 Ga0207648_10840817 3300026089 Bacteria 856
73 Ga0207676_10265246 3300026095 Unclassified 1553
74 Ga0207674_10669519 3300026116 Unclassified 1002
75 Ga0265337_1000035 3300028556 Bacteria 58448
76 Ga0265337_1005629 3300028556 Bacteria 4941
77 Ga0265337_1006221 3300028556 Bacteria 4636
78 Ga0265337_1019607 3300028556 Bacteria 2129
79 Ga0265319_1018954 3300028563 Bacteria 2580
80 Ga0265318_10023369 3300028577 Bacteria 2464
81 Ga0265336_10022031 3300028666 Bacteria 2031
82 Ga0265338_10000036 3300028800 Bacteria 238689
83 Ga0265338_10000374 3300028800 Bacteria 80245
84 Ga0265338_10003775 3300028800 Bacteria 21045
85 Ga0265338_10005041 3300028800 Bacteria 17437
86 Ga0265338_10006441 3300028800 Bacteria 14965
87 Ga0265338_10012284 3300028800 Bacteria 9777
88 Ga0265338_10016162 3300028800 Bacteria 8141
89 Ga0265338_10018803 3300028800 Bacteria 7371
90 Ga0265338_10049973 3300028800 Bacteria 3784
91 Ga0265338_10109410 3300028800 Bacteria 2230
92 Ga0265338_10117510 3300028800 Unclassified 2128
93 Ga0265338_10312111 3300028800 Unclassified 1140
94 Ga0265324_10000586 3300029957 Bacteria 24901
95 Ga0265324_10001049 3300029957 Bacteria 16838
96 Ga0265324_10146895 3300029957 Unclassified 800
97 Ga0265320_10132935 3300031240 Bacteria 1130
98 Ga0265340_10004505 3300031247 Bacteria 7775
99 Ga0265340_10026425 3300031247 Bacteria 2935
100 Ga0265340_10063950 3300031247 Bacteria 1755
101 Ga0265316_10095386 3300031344 Bacteria 2266
102 Ga0265316_10115912 3300031344 Bacteria 2025
103 Ga0265314_10012146 3300031711 Bacteria 7053
104 Ga0316578_10045472 3300031728 Bacteria 2556
105 Ga0307407_10186463 3300031903 Bacteria 1379
106 Ga0373953_0005171 3300035117 Bacteria 4218
107 Ga0373956_0005103 3300035119 Bacteria 5253
108 Ga0373946_0012252 3300035171 Bacteria 3207
109 Ga0373955_0101271 3300035172 Bacteria 1654
110 Ga0373955_0347433 3300035172 Bacteria 898
111 Ga0373935_0176180 3300035692 Bacteria 1466
112 Ga0373927_0004125 3300035695 Bacteria 10230
113 Ga0373933_0115216 3300035724 Bacteria 1679
114 Ga0373947_0034377 3300035725 Unclassified 2997
115 Ga0373937_0001417 3300036401 Bacteria 20032
116 Ga0373937_0410191 3300036401 Bacteria 1285
117 Ga0373937_0545958 3300036401 Bacteria 1101
118 Ga0373937_0824378 3300036401 Unclassified 876
119 Ga0316584_0284565 3300036712 Bacteria 1201
120 Ga0373925_0008496 3300037068 Bacteria 7484
121 Ga0395899_0000173 3300037312 Bacteria 96904
122 Ga0395900_0336033 3300037418 Bacteria 1487
123 Ga0436365_1106859 3300039437 Bacteria 11912
124 Ga0451577_0000250 3300042876 Bacteria 105934
125 Ga0451577_0000744 3300042876 Bacteria 50061
126 Ga0466965_0002020 3300044683 Bacteria 8499
127 Ga0453684_0001510 3300044712 Bacteria 65352
128 Ga0453684_0006695 3300044712 Bacteria 21742
129 Ga0453684_0012334 3300044712 Bacteria 14140
130 Ga0453684_0101996 3300044712 Bacteria 3509
131 Ga0453684_0964209 3300044712 Bacteria 909
132 Ga0495629_0044769 3300046459 Bacteria 3106
133 Ga0495618_0000975 3300046514 Bacteria 19607
134 Ga0495630_0247642 3300046517 Bacteria 1361
135 Ga0495630_0337137 3300046517 Unclassified 1153
136 Ga0495586_0012682 3300046535 Bacteria 4469
137 Ga0495645_0420675 3300046543 Bacteria 848
138 Ga0495667_0096092 3300046559 Bacteria 1918
139 Ga0495634_0010543 3300046642 Bacteria 6765
140 Ga0495635_0009487 3300046663 Bacteria 6801
141 Ga0495647_0067098 3300046681 Bacteria 1428
142 Ga0495674_0050256 3300047319 Bacteria 3680
143 Ga0495675_0276633 3300047444 Bacteria 1002
144 Ga0496121_0191018 3300048924 Unclassified 1468
145 Ga0496121_0239038 3300048924 Bacteria 1267
146 Ga0501031_0010392 3300049568 Bacteria 6062
147 Ga0501032_0000020 3300049569 Bacteria 148483
148 Ga0501032_0023355 3300049569 Bacteria 4274
149 Ga0501033_0000001 3300049570 Bacteria 795921
150 Ga0501033_0007002 3300049570 Bacteria 8802
151 Ga0501033_0129317 3300049570 Bacteria 1830
152 Ga0501033_0173038 3300049570 Bacteria 1550
153 Ga0501034_0589169 3300049571 Bacteria 1018
154 Ga0501036_0083332 3300049572 Bacteria 2703
155 Ga0501037_0028565 3300049573 Bacteria 4120
156 Ga0501038_0414365 3300049574 Unclassified 1040
157 Ga0501039_0001089 3300049575 Bacteria 19895
158 Ga0501043_0001429 3300049579 Bacteria 20863
159 Ga0501043_0384335 3300049579 Unclassified 1062
160 Ga0501047_0001145 3300049581 Bacteria 26300
161 Ga0501070_0007841 3300049586 Bacteria 9050
162 Ga0501035_0000001 3300049822 Bacteria 1037138
163 Ga0501035_0049035 3300049822 Bacteria 3785
164 Ga0501044_0017077 3300049823 Bacteria 7788
165 Ga0500556_0002173 3300053104 Bacteria 6615
166 Ga0500622_0257318 3300053156 Bacteria 763

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005459 Ga0068867_100808154 Ga0068867_1008081541 218
2 3300013308 Ga0157375_10074533 Ga0157375_100745334 218
3 3300026089 Ga0207648_10840817 Ga0207648_108408172 218
4 3300028556 Ga0265337_1005629 Ga0265337_10056294 219
5 3300028666 Ga0265336_10022031 Ga0265336_100220312 219
6 3300028800 Ga0265338_10049973 Ga0265338_100499734 219
7 3300029957 Ga0265324_10000586 Ga0265324_1000058623 219
8 3300049569 Ga0501032_0023355 Ga0501032_0023355_172_987 219
9 3300049570 Ga0501033_0007002 Ga0501033_0007002_1784_2599 219
10 3300049572 Ga0501036_0083332 Ga0501036_0083332_782_1540 219
11 3300049573 Ga0501037_0028565 Ga0501037_0028565_169_927 219
12 3300049579 Ga0501043_0384335 Ga0501043_0384335_10_768 219
13 3300049822 Ga0501035_0049035 Ga0501035_0049035_969_1784 219
14 3300049823 Ga0501044_0017077 Ga0501044_0017077_6801_7559 219
15 iso_pu_bacteria 2932082852 2932083670 222
16 3300005549 Ga0070704_100463279 Ga0070704_1004632792 224
17 3300005843 Ga0068860_100928420 Ga0068860_1009284201 224
18 3300005289 Ga0065704_10243003 Ga0065704_102430031 225
19 3300028800 Ga0265338_10000374 Ga0265338_1000037454 225
20 3300029957 Ga0265324_10001049 Ga0265324_100010492 225
21 3300042876 Ga0451577_0000250 Ga0451577_0000250_42224_42901 225
22 3300049570 Ga0501033_0173038 Ga0501033_0173038_579_1280 225
23 3300049574 Ga0501038_0414365 Ga0501038_0414365_320_1021 225
24 3300003320 rootH2_10204905 rootH2_102049052 226
25 3300003320 rootH2_10254018 rootH2_102540181 226
26 3300003322 rootL2_10302359 rootL2_103023592 226
27 3300005329 Ga0070683_100435716 Ga0070683_1004357161 226
28 3300005330 Ga0070690_100131409 Ga0070690_1001314092 226
29 3300005338 Ga0068868_100189014 Ga0068868_1001890142 226
30 3300005340 Ga0070689_100243998 Ga0070689_1002439982 226
31 3300005341 Ga0070691_10098759 Ga0070691_100987592 226
32 3300005354 Ga0070675_100336234 Ga0070675_1003362342 226
33 3300005435 Ga0070714_100079628 Ga0070714_1000796282 226
34 3300005435 Ga0070714_100130608 Ga0070714_1001306083 226
35 3300005436 Ga0070713_100210261 Ga0070713_1002102612 226
36 3300005445 Ga0070708_100087252 Ga0070708_1000872522 226
37 3300005458 Ga0070681_10019854 Ga0070681_100198542 226
38 3300005458 Ga0070681_10185134 Ga0070681_101851341 226
39 3300005563 Ga0068855_100157075 Ga0068855_1001570753 226
40 3300005563 Ga0068855_100181048 Ga0068855_1001810482 226
41 3300005563 Ga0068855_100294089 Ga0068855_1002940891 226
42 3300005563 Ga0068855_100723806 Ga0068855_1007238062 226
43 3300005614 Ga0068856_100025133 Ga0068856_1000251332 226
44 3300005841 Ga0068863_100327010 Ga0068863_1003270102 226
45 3300005937 Ga0081455_10157016 Ga0081455_101570162 226
46 3300006358 Ga0068871_100218094 Ga0068871_1002180942 226
47 3300006358 Ga0068871_100294799 Ga0068871_1002947991 226
48 3300009093 Ga0105240_10000271 Ga0105240_1000027131 226
49 3300009093 Ga0105240_10035190 Ga0105240_100351907 226
50 3300009093 Ga0105240_10211665 Ga0105240_102116652 226
51 3300009093 Ga0105240_10360438 Ga0105240_103604381 226
52 3300009093 Ga0105240_10481117 Ga0105240_104811172 226
53 3300009093 Ga0105240_10702800 Ga0105240_107028001 226
54 3300009093 Ga0105240_10910680 Ga0105240_109106801 226
55 3300009177 Ga0105248_10277178 Ga0105248_102771781 226
56 3300013100 Ga0157373_10244116 Ga0157373_102441161 226
57 3300013102 Ga0157371_10433973 Ga0157371_104339732 226
58 3300013104 Ga0157370_10331969 Ga0157370_103319692 226
59 3300013104 Ga0157370_10411721 Ga0157370_104117211 226
60 3300013296 Ga0157374_10142131 Ga0157374_101421311 226
61 3300013297 Ga0157378_10028677 Ga0157378_100286773 226
62 3300013297 Ga0157378_10318291 Ga0157378_103182912 226
63 3300013306 Ga0163162_10674384 Ga0163162_106743841 226
64 3300013307 Ga0157372_10416474 Ga0157372_104164742 226
65 3300013307 Ga0157372_10483051 Ga0157372_104830512 226
66 3300013307 Ga0157372_11003317 Ga0157372_110033171 226
67 3300013308 Ga0157375_10355318 Ga0157375_103553183 226
68 3300014326 Ga0157380_10000133 Ga0157380_100001339 226
69 3300021384 Ga0213876_10009756 Ga0213876_100097562 226
70 3300025903 Ga0207680_10045145 Ga0207680_100451452 226
71 3300025906 Ga0207699_10428234 Ga0207699_104282342 226
72 3300025912 Ga0207707_10022088 Ga0207707_100220888 226
73 3300025913 Ga0207695_10085303 Ga0207695_100853032 226
74 3300025913 Ga0207695_10104965 Ga0207695_101049652 226
75 3300025913 Ga0207695_10173620 Ga0207695_101736202 226
76 3300025913 Ga0207695_10298369 Ga0207695_102983691 226
77 3300025913 Ga0207695_10616122 Ga0207695_106161221 226
78 3300025915 Ga0207693_10430413 Ga0207693_104304131 226
79 3300025924 Ga0207694_10166112 Ga0207694_101661122 226
80 3300025929 Ga0207664_10100727 Ga0207664_101007272 226
81 3300025936 Ga0207670_10213883 Ga0207670_102138832 226
82 3300025941 Ga0207711_10207489 Ga0207711_102074892 226
83 3300025949 Ga0207667_10104897 Ga0207667_101048972 226
84 3300025949 Ga0207667_10938852 Ga0207667_109388521 226
85 3300026078 Ga0207702_10132882 Ga0207702_101328822 226
86 3300026088 Ga0207641_10284315 Ga0207641_102843151 226
87 3300026089 Ga0207648_10326370 Ga0207648_103263702 226
88 3300026095 Ga0207676_10265246 Ga0207676_102652462 226
89 3300026116 Ga0207674_10669519 Ga0207674_106695192 226
90 3300028556 Ga0265337_1000035 Ga0265337_100003517 226
91 3300028556 Ga0265337_1006221 Ga0265337_10062215 226
92 3300028556 Ga0265337_1019607 Ga0265337_10196072 226
93 3300028563 Ga0265319_1018954 Ga0265319_10189543 226
94 3300028577 Ga0265318_10023369 Ga0265318_100233692 226
95 3300028800 Ga0265338_10000036 Ga0265338_10000036159 226
96 3300028800 Ga0265338_10003775 Ga0265338_100037758 226
97 3300028800 Ga0265338_10005041 Ga0265338_100050417 226
98 3300028800 Ga0265338_10006441 Ga0265338_100064416 226
99 3300028800 Ga0265338_10012284 Ga0265338_100122844 226
100 3300028800 Ga0265338_10016162 Ga0265338_100161624 226
101 3300028800 Ga0265338_10018803 Ga0265338_100188032 226
102 3300028800 Ga0265338_10109410 Ga0265338_101094102 226
103 3300028800 Ga0265338_10117510 Ga0265338_101175103 226
104 3300028800 Ga0265338_10312111 Ga0265338_103121112 226
105 3300029957 Ga0265324_10146895 Ga0265324_101468952 226
106 3300031240 Ga0265320_10132935 Ga0265320_101329352 226
107 3300031247 Ga0265340_10004505 Ga0265340_100045057 226
108 3300031247 Ga0265340_10026425 Ga0265340_100264252 226
109 3300031247 Ga0265340_10063950 Ga0265340_100639503 226
110 3300031344 Ga0265316_10095386 Ga0265316_100953862 226
111 3300031344 Ga0265316_10115912 Ga0265316_101159122 226
112 3300031711 Ga0265314_10012146 Ga0265314_100121463 226
113 3300031728 Ga0316578_10045472 Ga0316578_100454722 226
114 3300031903 Ga0307407_10186463 Ga0307407_101864632 226
115 3300035117 Ga0373953_0005171 Ga0373953_0005171_1770_2450 226
116 3300035119 Ga0373956_0005103 Ga0373956_0005103_3124_3804 226
117 3300035171 Ga0373946_0012252 Ga0373946_0012252_2254_2934 226
118 3300035172 Ga0373955_0101271 Ga0373955_0101271_922_1602 226
119 3300035172 Ga0373955_0347433 Ga0373955_0347433_162_842 226
120 3300035692 Ga0373935_0176180 Ga0373935_0176180_750_1430 226
121 3300035695 Ga0373927_0004125 Ga0373927_0004125_9385_10065 226
122 3300035724 Ga0373933_0115216 Ga0373933_0115216_508_1188 226
123 3300035725 Ga0373947_0034377 Ga0373947_0034377_423_1103 226
124 3300036401 Ga0373937_0001417 Ga0373937_0001417_1314_1994 226
125 3300036401 Ga0373937_0410191 Ga0373937_0410191_175_855 226
126 3300036401 Ga0373937_0545958 Ga0373937_0545958_334_1044 226
127 3300036401 Ga0373937_0824378 Ga0373937_0824378_34_714 226
128 3300036712 Ga0316584_0284565 Ga0316584_0284565_180_866 226
129 3300037068 Ga0373925_0008496 Ga0373925_0008496_4919_5599 226
130 3300037312 Ga0395899_0000173 Ga0395899_0000173_27467_28147 226
131 3300037418 Ga0395900_0336033 Ga0395900_0336033_687_1367 226
132 3300039437 Ga0436365_1106859 Ga0436365_1106859_900_1688 226
133 3300042876 Ga0451577_0000744 Ga0451577_0000744_34241_34921 226
134 3300044712 Ga0453684_0001510 Ga0453684_0001510_31070_31750 226
135 3300044712 Ga0453684_0006695 Ga0453684_0006695_8122_8802 226
136 3300044712 Ga0453684_0012334 Ga0453684_0012334_3761_4441 226
137 3300044712 Ga0453684_0101996 Ga0453684_0101996_2753_3433 226
138 3300044712 Ga0453684_0964209 Ga0453684_0964209_36_716 226
139 3300046459 Ga0495629_0044769 Ga0495629_0044769_1808_2488 226
140 3300046514 Ga0495618_0000975 Ga0495618_0000975_1979_2659 226
141 3300046517 Ga0495630_0247642 Ga0495630_0247642_318_998 226
142 3300046517 Ga0495630_0337137 Ga0495630_0337137_415_1095 226
143 3300046535 Ga0495586_0012682 Ga0495586_0012682_1550_2230 226
144 3300046543 Ga0495645_0420675 Ga0495645_0420675_11_691 226
145 3300046559 Ga0495667_0096092 Ga0495667_0096092_256_936 226
146 3300046642 Ga0495634_0010543 Ga0495634_0010543_4219_4899 226
147 3300046663 Ga0495635_0009487 Ga0495635_0009487_2255_2935 226
148 3300046681 Ga0495647_0067098 Ga0495647_0067098_683_1363 226
149 3300047319 Ga0495674_0050256 Ga0495674_0050256_434_1114 226
150 3300047444 Ga0495675_0276633 Ga0495675_0276633_293_973 226
151 3300048924 Ga0496121_0191018 Ga0496121_0191018_57_737 226
152 3300048924 Ga0496121_0239038 Ga0496121_0239038_22_702 226
153 3300049570 Ga0501033_0129317 Ga0501033_0129317_1120_1800 226
154 3300049571 Ga0501034_0589169 Ga0501034_0589169_28_708 226
155 3300053104 Ga0500556_0002173 Ga0500556_0002173_504_1184 226
156 3300053156 Ga0500622_0257318 Ga0500622_0257318_47_733 226
157 3300002155 JGI24033J26618_1000307 JGI24033J26618_10003076 227
158 3300003322 rootL2_10134356 rootL2_101343561 227
159 3300044683 Ga0466965_0002020 Ga0466965_0002020_5981_6664 227
160 3300049568 Ga0501031_0010392 Ga0501031_0010392_3540_4223 227
161 3300049569 Ga0501032_0000020 Ga0501032_0000020_83654_84337 227
162 3300049570 Ga0501033_0000001 Ga0501033_0000001_534756_535439 227
163 3300049575 Ga0501039_0001089 Ga0501039_0001089_4865_5548 227
164 3300049579 Ga0501043_0001429 Ga0501043_0001429_17299_17982 227
165 3300049581 Ga0501047_0001145 Ga0501047_0001145_21279_21962 227
166 3300049586 Ga0501070_0007841 Ga0501070_0007841_6662_7345 227
167 3300049822 Ga0501035_0000001 Ga0501035_0000001_765994_766677 227

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13483

Lactamase_B_3

Beta-lactamase superfamily domain

47

228

0.89

PF12706

Lactamase_B_2

Beta-lactamase superfamily domain

63

229

0.81

PF00753

Lactamase_B

Metallo-beta-lactamase superfamily

48

250

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
3x30-assembly1.cif.gz_A crystal structure of metallo-beta-lactamase from thermotoga maritima 0.9462 1 227
3x2x-assembly1.cif.gz_C crystal structure of metallo-beta-lactamase h48a from thermotoga maritima 0.9438 1 227
3x2y-assembly1.cif.gz_C crystal structure of metallo-beta-lactamase h8a from thermotoga maritima 0.9301 2 227
7e3w-assembly1.cif.gz_C metallo beta-lactamase fold protein (camp bound) 0.9085 1 227
7e3w-assembly1.cif.gz_C metallo beta-lactamase fold protein (camp bound) 0.9047 1 227
ID Description Score Start End Superfamily
3x30A00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.943 1 227 3.60.15.10
af_Q58563_1_217_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9412 3 227 3.60.15.10
3x30A00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9388 1 227 3.60.15.10
af_Q58563_1_217_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9328 3 227 3.60.15.10
af_Q2FXM0_1_229_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.9065 1 227 3.60.15.10
ID Description Score Start End GO Terms
AF-A0A3C0IWA3-F1-model_v4 Metal-dependent hydrolase 0.9953 41 227 GO:0016787
AF-A0A1G4PZZ2-F1-model_v4 L-ascorbate metabolism protein UlaG, beta-lactamase superfamily 0.9942 1 227
AF-A0A520BK39-F1-model_v4 Hydrolase 0.9942 137 227 GO:0016787
AF-A0A662BX77-F1-model_v4 Hydrolase 0.9937 1 69 GO:0016787
AF-A0A7C5D4R1-F1-model_v4 Metal-dependent hydrolase 0.9936 1 227 GO:0016787

Feature Viewer

pLDDT pTM Quality
97.09 0.94 High
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Predicted Structure (AlphaFold2)

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