F250688

General Info

Members Datasets Scaffolds Average Seq Length
167 117 334 564

Family's Representative Sequence

Representative Sequence 3300026035|Ga0207703_10125087|Ga0207703_101250872
Length 622
Sequence MSDEARAAAVHPSTVEDGWPEGLRGPALLARTAYNRDAAFTEEERDALGLRGLMPWGVVGLAQQVALELEHLHDKSDDLEKYIGLAALQDRNETLFYRLLTDHLEELAPIVYTPTVGDACRRFSHVVRRTRGLWITPDDIDRIPRLLANAQRPGVRLIVATDNERILGLGDQGAGGMGIPIGKLALYTAGAGVHPGLTLPVSLDCGTDNEDLLNDPHYLGYPKPRLRGAAYDEFIEAFVTAVMAHYPQALLQWEDFKQHNAIRLLQRYRHRLPSFNDDIQGTAAVVLAGIHTALRGRGESLARQRLVLLGAGAAGLGIARLVAGAMLREGTDADEIRHRIVMLDSQGLVYEGRAGLDDDKREFALSAGSLAGYGLTPSSGDHYDLEAVVRHVAPTILVGTTGTAGAFTPDAIRAMAAQVSAPIVMPLSNPTAKSEARPTDVLAWSGGRAIVATGSPFEPVTVGGRPRVIGQANNVFIFPGLGLGAIVARAREVTDAMFIVAARTLADLTPPERLAQGALYPRLAELRSISRAIAIAVAREAHDSGAADAPDRDVDATVDAAMWRPCTPQCHCPPDRRPSETDHIDMTVHIGPPTLEETSHGACSFGAFAVAFLALTQCKSWV

Samples

Sample ID Description Type Environment
1 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
35 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
44 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
47 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
48 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
49 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
50 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
51 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
52 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
53 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
54 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
55 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
56 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
57 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
58 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
59 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
60 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
61 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
62 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
63 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
64 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
65 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
66 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
67 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
68 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
69 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
70 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
71 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
72 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
73 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
74 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
75 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
76 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
77 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
78 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
79 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
80 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
81 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
82 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
83 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
84 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
85 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
86 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
87 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
88 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
89 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
90 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
101 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
102 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
103 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
104 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
105 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
106 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
107 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
109 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
110 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
111 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
112 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
113 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
114 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
115 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
116 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
117 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.19
Rhizosphere 91.62
Stem 0
Stem Tuber 0
Unclassified 1.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207703_10125087 3300026035 Bacteria 2212
2 Ga0070689_100013521 3300005340 Bacteria 5910
3 Ga0070688_100020023 3300005365 Bacteria 3884
4 Ga0070709_10055492 3300005434 Bacteria 2501
5 Ga0070714_100000412 3300005435 Bacteria 31378
6 Ga0070711_100070012 3300005439 Unclassified 2469
7 Ga0070708_100002542 3300005445 Bacteria 14088
8 Ga0070708_100029580 3300005445 Bacteria 4725
9 Ga0070685_10018774 3300005466 Bacteria 3724
10 Ga0070706_100041051 3300005467 Bacteria 4272
11 Ga0070707_100067103 3300005468 Bacteria 3450
12 Ga0070698_100142072 3300005471 Bacteria 2351
13 Ga0070699_100033829 3300005518 Bacteria 4416
14 Ga0070697_100006029 3300005536 Bacteria 9375
15 Ga0070697_100033574 3300005536 Bacteria 4133
16 Ga0068857_100117316 3300005577 Bacteria 2395
17 Ga0068859_100099427 3300005617 Bacteria 2964
18 Ga0068864_100009778 3300005618 Bacteria 7906
19 Ga0068864_100022363 3300005618 Bacteria 5302
20 Ga0068864_100037248 3300005618 Bacteria 4150
21 Ga0068864_100104800 3300005618 Bacteria 2513
22 Ga0068861_100056695 3300005719 Bacteria 2991
23 Ga0068863_100029958 3300005841 Bacteria 5198
24 Ga0068858_100005429 3300005842 Bacteria 12487
25 Ga0068871_100097467 3300006358 Bacteria 2458
26 Ga0075428_100007191 3300006844 Bacteria 12327
27 Ga0075430_100015973 3300006846 Bacteria 6393
28 Ga0075431_100007205 3300006847 Bacteria 11063
29 Ga0075431_100028711 3300006847 Bacteria 5720
30 Ga0075431_100200084 3300006847 Bacteria 2044
31 Ga0075433_10032798 3300006852 Bacteria 4450
32 Ga0075434_100003920 3300006871 Bacteria 13329
33 Ga0075429_100030260 3300006880 Bacteria 4703
34 Ga0097620_100099431 3300006931 Bacteria 2964
35 Ga0111539_10000814 3300009094 Bacteria 40484
36 Ga0105245_10028984 3300009098 Bacteria 4888
37 Ga0114129_10000188 3300009147 Bacteria 69173
38 Ga0114129_10005838 3300009147 Bacteria 17436
39 Ga0114129_10131242 3300009147 Bacteria 3440
40 Ga0105248_10018286 3300009177 Bacteria 7739
41 Ga0105248_10029507 3300009177 Bacteria 6119
42 Ga0105248_10042908 3300009177 Bacteria 5071
43 Ga0105246_10000216 3300011119 Bacteria 29218
44 Ga0105246_10016695 3300011119 Bacteria 4653
45 Ga0163163_10010074 3300014325 Bacteria 8478
46 Ga0163163_10098739 3300014325 Bacteria 2941
47 Ga0157379_10002023 3300014968 Bacteria 16808
48 Ga0207693_10028196 3300025915 Bacteria 4436
49 Ga0207646_10036725 3300025922 Bacteria 4422
50 Ga0207646_10098066 3300025922 Unclassified 2626
51 Ga0207700_10117831 3300025928 Bacteria 2148
52 Ga0207711_10053296 3300025941 Bacteria 3469
53 Ga0207661_10103412 3300025944 Bacteria 2397
54 Ga0207679_10137451 3300025945 Bacteria 1970
55 Ga0207703_10006280 3300026035 Bacteria 9500
56 Ga0207641_10083576 3300026088 Bacteria 2777
57 Ga0207675_100099757 3300026118 Bacteria 2735
58 Ga0207428_10006094 3300027907 Bacteria 11151
59 Ga0268265_10117966 3300028380 Unclassified 2181
60 Ga0268264_10039848 3300028381 Bacteria 3881
61 Ga0268264_10072640 3300028381 Bacteria 2917
62 Ga0265316_10121808 3300031344 Bacteria 1970
63 Ga0307508_10001414 3300031616 Bacteria 27013
64 Ga0316576_10004956 3300031727 Bacteria 8061
65 Ga0316577_10000488 3300031733 Bacteria 15662
66 Ga0373934_0005098 3300035086 Bacteria 4869
67 Ga0373934_0007546 3300035086 Bacteria 4038
68 Ga0373946_0005190 3300035171 Bacteria 4695
69 Ga0316574_0038918 3300035398 Bacteria 2921
70 Ga0373935_0110136 3300035692 Bacteria 1827
71 Ga0373933_0046246 3300035724 Bacteria 2583
72 Ga0373937_0011805 3300036401 Bacteria 7668
73 Ga0316581_0014940 3300037588 Bacteria 2214
74 Ga0400483_175066 3300039062 Bacteria 5151
75 Ga0436360_0147389 3300039438 Bacteria 3895
76 Ga0436360_0594033 3300039438 Bacteria 1803
77 Ga0436362_1181435 3300039453 Bacteria 3661
78 Ga0451577_0000820 3300042876 Bacteria 46570
79 Ga0451577_0014735 3300042876 Bacteria 7284
80 Ga0451577_0022902 3300042876 Bacteria 5702
81 Ga0451577_0025192 3300042876 Bacteria 5399
82 Ga0453684_0001105 3300044712 Bacteria 84773
83 Ga0453684_0038669 3300044712 Bacteria 6517
84 Ga0453684_0060260 3300044712 Bacteria 4884
85 Ga0451576_0017348 3300045051 Bacteria 7918
86 Ga0451576_0232209 3300045051 Bacteria 1927
87 Ga0495664_0048949 3300046477 Bacteria 2509
88 Ga0495628_0108297 3300046516 Bacteria 2139
89 Ga0495630_0052586 3300046517 Bacteria 3050
90 Ga0495652_0004430 3300046529 Bacteria 13426
91 Ga0495586_0005106 3300046535 Bacteria 7026
92 Ga0495586_0073651 3300046535 Bacteria 1868
93 Ga0495667_0027777 3300046559 Bacteria 3810
94 Ga0495634_0018302 3300046642 Bacteria 4989
95 Ga0495635_0023122 3300046663 Bacteria 4332
96 Ga0495588_0038953 3300046674 Bacteria 2420
97 Ga0495657_0033594 3300046675 Bacteria 3570
98 Ga0495599_0058197 3300046678 Bacteria 2418
99 Ga0495599_0075719 3300046678 Bacteria 2101
100 Ga0495623_0025501 3300046679 Bacteria 3808
101 Ga0495646_0077201 3300046680 Bacteria 1949
102 Ga0495658_0065574 3300046683 Bacteria 2095
103 Ga0495613_0111505 3300046689 Bacteria 1971
104 Ga0495624_0006898 3300046690 Bacteria 8012
105 Ga0495604_0030930 3300047317 Bacteria 4248
106 Ga0495680_0005157 3300047322 Bacteria 12325
107 Ga0495684_0049746 3300047471 Bacteria 3202
108 Ga0495684_0094034 3300047471 Bacteria 2270
109 Ga0496102_0213800 3300048905 Bacteria 1818
110 Ga0496104_0005060 3300048907 Bacteria 11500
111 Ga0496104_0057485 3300048907 Bacteria 3680
112 Ga0496105_0055288 3300048908 Bacteria 3277
113 Ga0496109_0057522 3300048912 Bacteria 3550
114 Ga0496110_0021880 3300048913 Bacteria 5422
115 Ga0496111_0009654 3300048914 Bacteria 6448
116 Ga0496111_0024820 3300048914 Bacteria 4228
117 Ga0496112_0000012 3300048915 Bacteria 243643
118 Ga0496112_0008137 3300048915 Bacteria 9368
119 Ga0496113_0002457 3300048916 Bacteria 10788
120 Ga0496113_0014855 3300048916 Bacteria 5329
121 Ga0501031_0021927 3300049568 Bacteria 4162
122 Ga0501031_0047367 3300049568 Bacteria 2803
123 Ga0501033_0049187 3300049570 Bacteria 3130
124 Ga0501034_0000349 3300049571 Bacteria 79675
125 Ga0501036_0081947 3300049572 Bacteria 2727
126 Ga0501039_0029541 3300049575 Bacteria 4222
127 Ga0501040_0001937 3300049576 Bacteria 13308
128 Ga0501040_0012493 3300049576 Bacteria 5565
129 Ga0501040_0024718 3300049576 Bacteria 4034
130 Ga0501041_0003505 3300049577 Bacteria 9031
131 Ga0501041_0030539 3300049577 Bacteria 3253
132 Ga0501041_0041169 3300049577 Bacteria 2805
133 Ga0501042_0010851 3300049578 Bacteria 6128
134 Ga0501042_0012501 3300049578 Bacteria 5752
135 Ga0501046_0050156 3300049580 Bacteria 3298
136 Ga0501048_0022798 3300049582 Bacteria 4578
137 Ga0501071_0008805 3300049587 Bacteria 6687
138 Ga0501071_0020926 3300049587 Bacteria 4552
139 Ga0501071_0030817 3300049587 Bacteria 3796
140 Ga0501071_0082656 3300049587 Bacteria 2352
141 Ga0501072_0036348 3300049588 Bacteria 3861
142 Ga0501075_0009181 3300049591 Bacteria 6913
143 Ga0501075_0077199 3300049591 Bacteria 2520
144 Ga0501075_0092375 3300049591 Bacteria 2297
145 Ga0501076_0013847 3300049592 Bacteria 6055
146 Ga0501076_0030070 3300049592 Bacteria 4229
147 Ga0501079_0012861 3300049741 Bacteria 6389
148 Ga0501080_0105217 3300049742 Bacteria 2617
149 Ga0501081_0006590 3300049743 Bacteria 7546
150 Ga0501081_0009032 3300049743 Bacteria 6481
151 Ga0501081_0042138 3300049743 Bacteria 3128
152 Ga0501035_0082347 3300049822 Bacteria 2840
153 Ga0501044_0008107 3300049823 Bacteria 11531
154 nmdc:mga05p37_119009_c1 3300050507 Bacteria 3245
155 nmdc:mga05p37_4113_c1 3300050507 Bacteria 17011
156 nmdc:mga05p37_7317_c1 3300050507 Bacteria 13027
157 nmdc:mga09592_43_c1 3300050508 Bacteria 70027
158 nmdc:mga0qj67_39_c2 3300050509 Bacteria 75728
159 nmdc:mga06r32_8060_c1 3300050510 Bacteria 9478
160 nmdc:mga06r32_914_c1 3300050510 Bacteria 17280
161 nmdc:mga08y16_17579_c1 3300050511 Bacteria 7533
162 nmdc:mga08y16_66880_c1 3300050511 Bacteria 3750
163 nmdc:mga0a205_5795_c1 3300050515 Bacteria 11140
164 Ga0495619_0049134 3300053085 Bacteria 2781
165 Ga0495619_0069075 3300053085 Bacteria 2361
166 Ga0501084_0136919 3300054114 Bacteria 2061
167 Ga0530510_0079719 3300061734 Bacteria 2382
168 Ga0207703_10125087
169 Ga0070689_100013521
170 Ga0070688_100020023
171 Ga0070709_10055492
172 Ga0070714_100000412
173 Ga0070711_100070012
174 Ga0070708_100002542
175 Ga0070708_100029580
176 Ga0070685_10018774
177 Ga0070706_100041051
178 Ga0070707_100067103
179 Ga0070698_100142072
180 Ga0070699_100033829
181 Ga0070697_100006029
182 Ga0070697_100033574
183 Ga0068857_100117316
184 Ga0068859_100099427
185 Ga0068864_100009778
186 Ga0068864_100022363
187 Ga0068864_100037248
188 Ga0068864_100104800
189 Ga0068861_100056695
190 Ga0068863_100029958
191 Ga0068858_100005429
192 Ga0068871_100097467
193 Ga0075428_100007191
194 Ga0075430_100015973
195 Ga0075431_100007205
196 Ga0075431_100028711
197 Ga0075431_100200084
198 Ga0075433_10032798
199 Ga0075434_100003920
200 Ga0075429_100030260
201 Ga0097620_100099431
202 Ga0111539_10000814
203 Ga0105245_10028984
204 Ga0114129_10000188
205 Ga0114129_10005838
206 Ga0114129_10131242
207 Ga0105248_10018286
208 Ga0105248_10029507
209 Ga0105248_10042908
210 Ga0105246_10000216
211 Ga0105246_10016695
212 Ga0163163_10010074
213 Ga0163163_10098739
214 Ga0157379_10002023
215 Ga0207693_10028196
216 Ga0207646_10036725
217 Ga0207646_10098066
218 Ga0207700_10117831
219 Ga0207711_10053296
220 Ga0207661_10103412
221 Ga0207679_10137451
222 Ga0207703_10006280
223 Ga0207641_10083576
224 Ga0207675_100099757
225 Ga0207428_10006094
226 Ga0268265_10117966
227 Ga0268264_10039848
228 Ga0268264_10072640
229 Ga0265316_10121808
230 Ga0307508_10001414
231 Ga0316576_10004956
232 Ga0316577_10000488
233 Ga0373934_0005098
234 Ga0373934_0007546
235 Ga0373946_0005190
236 Ga0316574_0038918
237 Ga0373935_0110136
238 Ga0373933_0046246
239 Ga0373937_0011805
240 Ga0316581_0014940
241 Ga0400483_175066
242 Ga0436360_0147389
243 Ga0436360_0594033
244 Ga0436362_1181435
245 Ga0451577_0000820
246 Ga0451577_0014735
247 Ga0451577_0022902
248 Ga0451577_0025192
249 Ga0453684_0001105
250 Ga0453684_0038669
251 Ga0453684_0060260
252 Ga0451576_0017348
253 Ga0451576_0232209
254 Ga0495664_0048949
255 Ga0495628_0108297
256 Ga0495630_0052586
257 Ga0495652_0004430
258 Ga0495586_0005106
259 Ga0495586_0073651
260 Ga0495667_0027777
261 Ga0495634_0018302
262 Ga0495635_0023122
263 Ga0495588_0038953
264 Ga0495657_0033594
265 Ga0495599_0058197
266 Ga0495599_0075719
267 Ga0495623_0025501
268 Ga0495646_0077201
269 Ga0495658_0065574
270 Ga0495613_0111505
271 Ga0495624_0006898
272 Ga0495604_0030930
273 Ga0495680_0005157
274 Ga0495684_0049746
275 Ga0495684_0094034
276 Ga0496102_0213800
277 Ga0496104_0005060
278 Ga0496104_0057485
279 Ga0496105_0055288
280 Ga0496109_0057522
281 Ga0496110_0021880
282 Ga0496111_0009654
283 Ga0496111_0024820
284 Ga0496112_0000012
285 Ga0496112_0008137
286 Ga0496113_0002457
287 Ga0496113_0014855
288 Ga0501031_0021927
289 Ga0501031_0047367
290 Ga0501033_0049187
291 Ga0501034_0000349
292 Ga0501036_0081947
293 Ga0501039_0029541
294 Ga0501040_0001937
295 Ga0501040_0012493
296 Ga0501040_0024718
297 Ga0501041_0003505
298 Ga0501041_0030539
299 Ga0501041_0041169
300 Ga0501042_0010851
301 Ga0501042_0012501
302 Ga0501046_0050156
303 Ga0501048_0022798
304 Ga0501071_0008805
305 Ga0501071_0020926
306 Ga0501071_0030817
307 Ga0501071_0082656
308 Ga0501072_0036348
309 Ga0501075_0009181
310 Ga0501075_0077199
311 Ga0501075_0092375
312 Ga0501076_0013847
313 Ga0501076_0030070
314 Ga0501079_0012861
315 Ga0501080_0105217
316 Ga0501081_0006590
317 Ga0501081_0009032
318 Ga0501081_0042138
319 Ga0501035_0082347
320 Ga0501044_0008107
321 nmdc:mga05p37_119009_c1
322 nmdc:mga05p37_4113_c1
323 nmdc:mga05p37_7317_c1
324 nmdc:mga09592_43_c1
325 nmdc:mga0qj67_39_c2
326 nmdc:mga06r32_8060_c1
327 nmdc:mga06r32_914_c1
328 nmdc:mga08y16_17579_c1
329 nmdc:mga08y16_66880_c1
330 nmdc:mga0a205_5795_c1
331 Ga0495619_0049134
332 Ga0495619_0069075
333 Ga0501084_0136919
334 Ga0530510_0079719

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00390

malic

Malic enzyme, N-terminal domain

89

269

0.99

PF03949

Malic_M

Malic enzyme, NAD binding domain

279

542

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gq2-assembly1.cif.gz_B malic enzyme from pigeon liver 0.9597 22 564
2aw5-assembly2.cif.gz_C crystal structure of a human malic enzyme 0.9597 23 562
7x11-assembly1.cif.gz_D crystal structure of me1 in complex with nadph 0.9544 18 565
8eyn-assembly1.cif.gz_A crystal structure of human mitochondrial nadp+ malic enzyme 3 in apo form 0.954 19 562
2aw5-assembly1.cif.gz_A crystal structure of a human malic enzyme 0.9536 23 562
ID Description Score Start End Superfamily
af_A4I0R5_18_270_3.40.50.10380 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Malic enzyme, N-terminal domain 0.9745 24 274 3.40.50.10380
af_P26616_16_268_3.40.50.10380 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Malic enzyme, N-terminal domain 0.9703 23 274 3.40.50.10380
af_P9WK25_11_262_3.40.50.10380 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Malic enzyme, N-terminal domain 0.9697 27 274 3.40.50.10380
af_P26616_269_564_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9666 275 568 3.40.50.720
af_P36013_100_352_3.40.50.10380 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Malic enzyme, N-terminal domain 0.9647 24 274 3.40.50.10380
ID Description Score Start End GO Terms
AF-A0A446JV40-F1-model_v4 deleted 0.9917 131 277
AF-Q5QSE1-F1-model_v4 Malolactic enzyme 0.988 152 263 GO:0004470
GO:0005829
GO:0006090
GO:0006108
GO:0016616
GO:0046872
AF-A0A533JAX9-F1-model_v4 deleted 0.984 25 115
AF-G5RTB9-F1-model_v4 NAD-dependent malic enzyme 0.9831 142 293 GO:0004470
GO:0005829
GO:0006090
GO:0006108
GO:0016616
GO:0046872
AF-A0A401TXF5-F1-model_v4 Malic enzyme 0.9819 175 320 GO:0004470
GO:0005829
GO:0006090
GO:0006108
GO:0016616
GO:0046872
GO:0051287

Map