F250673
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 167 | 118 | 167 | 554 |
Family's Representative Sequence
| Representative Sequence | 3300025942|Ga0207689_10065817|Ga0207689_100658172 |
| Length | 648 |
| Sequence | MQTSPPTSSSWERVAPRAQAFSQYLVPMQELLNPLQQHLWIVIGVVAVLVLLVAWRLVMRLFGIVIIPDDSIGLVTKKFVLIGSHRELPAGKIVALKGEAGLQADALAPGLKFGYWPWQYDVEIKPFLVVPNGQIAIVESCDGKPMAEGHILGRQVDCDDFQDARAFLESGGERGAQMAVIPPGTWRINTLVFKTELVNMEVIPAGKIGVVEAKDGKPLSGGRIIGRHVDCDSFQDAQAFMSNGGERGPQMTIIPQGQYRINPKLFTVMMEDVTDIPDNMVGIVTAKEGEPLKSGVIAGREVAGHNMYQDPQAFVANGGSKGLQEQVLLAGRYFINPRFATVEMQEMTKVPIANVGVVIAYVGSEGVDVTGDSFKHGNLVSRGEKGVWVQPLDPGKYPINPYTHKVEVVPTANVVLNWATGKSEAHNLDKNLSTITVRSSDGFTFNLDVSQIIHIPRTEAPKVIARFGSMANLVTQVLEPTIGNYFRNAAQNSDVIDFLKQRSKRQNEAKESISSALSEYNVGAVDTLIGDITPPSELMKTLTDRKLAEQEQITYGTQEQAEMIRKNLAQATAMADTQPGKKKTAAMDPEKYAMVEVARALAASGFKLVPDIVATGGAGGTDGGNSLVNILLASVIRDSVNKTNDKKS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 2 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 3 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Metagenome | Rhizosphere |
| 7 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 9 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 11 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 14 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 15 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 18 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 19 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 20 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 21 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 22 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 23 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 24 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 25 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300020080 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 41 | 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 60 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 61 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 62 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 63 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 64 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 65 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 66 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 67 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 68 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 69 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 70 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 71 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 72 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 73 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 74 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 75 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 76 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 77 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 78 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 79 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 80 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 106 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 107 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 108 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 109 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 110 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 111 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 112 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 113 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 114 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 115 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 116 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 118 | 3300053121 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.8 |
| Metatranscriptomes | 1.2 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.2 |
| Nodule | 0 |
| Rhizoplane | 1.2 |
| Rhizosphere | 92.81 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 4.79 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH2_10001221 | 3300003320 | Bacteria | 10746 |
| 2 | rootH2_10009480 | 3300003320 | Bacteria | 6490 |
| 3 | rootH2_10020202 | 3300003320 | Bacteria | 3260 |
| 4 | rootH1_10008769 | 3300003323 | Bacteria | 7101 |
| 5 | Ga0070658_10038456 | 3300005327 | Unclassified | 3858 |
| 6 | Ga0070683_100028021 | 3300005329 | Bacteria | 5087 |
| 7 | Ga0070661_100098456 | 3300005344 | Bacteria | 2172 |
| 8 | Ga0070703_10000712 | 3300005406 | Bacteria | 11210 |
| 9 | Ga0070705_100047641 | 3300005440 | Bacteria | 2479 |
| 10 | Ga0070694_100008886 | 3300005444 | Bacteria | 6156 |
| 11 | Ga0070708_100050723 | 3300005445 | Bacteria | 3675 |
| 12 | Ga0070708_100170330 | 3300005445 | Bacteria | 2032 |
| 13 | Ga0070681_10015936 | 3300005458 | Bacteria | 7495 |
| 14 | Ga0070706_100036610 | 3300005467 | Bacteria | 4533 |
| 15 | Ga0070706_100098812 | 3300005467 | Bacteria | 2712 |
| 16 | Ga0070707_100030333 | 3300005468 | Bacteria | 5148 |
| 17 | Ga0070679_100044003 | 3300005530 | Bacteria | 4447 |
| 18 | Ga0070686_100004763 | 3300005544 | Bacteria | 7485 |
| 19 | Ga0070665_100000037 | 3300005548 | Bacteria | 312727 |
| 20 | Ga0070665_100001205 | 3300005548 | Bacteria | 31505 |
| 21 | Ga0070704_100058079 | 3300005549 | Bacteria | 2754 |
| 22 | Ga0068855_100052698 | 3300005563 | Bacteria | 4789 |
| 23 | Ga0068856_100049265 | 3300005614 | Bacteria | 4152 |
| 24 | Ga0068858_100001119 | 3300005842 | Bacteria | 27746 |
| 25 | Ga0068858_100004427 | 3300005842 | Bacteria | 13779 |
| 26 | Ga0068860_100000078 | 3300005843 | Bacteria | 171062 |
| 27 | Ga0075428_100069758 | 3300006844 | Unclassified | 3842 |
| 28 | Ga0075431_100006631 | 3300006847 | Bacteria | 11503 |
| 29 | Ga0075434_100005162 | 3300006871 | Bacteria | 11857 |
| 30 | Ga0075436_100043181 | 3300006914 | Unclassified | 3108 |
| 31 | Ga0105240_10002396 | 3300009093 | Bacteria | 30187 |
| 32 | Ga0105240_10054509 | 3300009093 | Bacteria | 5011 |
| 33 | Ga0111539_10090118 | 3300009094 | Bacteria | 3604 |
| 34 | Ga0105245_10050631 | 3300009098 | Unclassified | 3723 |
| 35 | Ga0114129_10002174 | 3300009147 | Bacteria | 27002 |
| 36 | Ga0114129_10016689 | 3300009147 | Bacteria | 10457 |
| 37 | Ga0114129_10072003 | 3300009147 | Bacteria | 4819 |
| 38 | Ga0114129_10095909 | 3300009147 | Bacteria | 4107 |
| 39 | Ga0114129_10148056 | 3300009147 | Bacteria | 3215 |
| 40 | Ga0105248_10069864 | 3300009177 | Bacteria | 3944 |
| 41 | Ga0105248_10194448 | 3300009177 | Bacteria | 2285 |
| 42 | Ga0105238_10011773 | 3300009551 | Bacteria | 8817 |
| 43 | Ga0105238_10078906 | 3300009551 | Bacteria | 3282 |
| 44 | Ga0105238_10121845 | 3300009551 | Bacteria | 2587 |
| 45 | Ga0105249_10006709 | 3300009553 | Bacteria | 10030 |
| 46 | Ga0105249_10123423 | 3300009553 | Unclassified | 2464 |
| 47 | Ga0157369_10007986 | 3300013105 | Bacteria | 12158 |
| 48 | Ga0157374_10043064 | 3300013296 | Bacteria | 4168 |
| 49 | Ga0163162_10063573 | 3300013306 | Bacteria | 3734 |
| 50 | Ga0157372_10012123 | 3300013307 | Bacteria | 9183 |
| 51 | Ga0163163_10102881 | 3300014325 | Bacteria | 2881 |
| 52 | Ga0157377_10051012 | 3300014745 | Unclassified | 2332 |
| 53 | Ga0157379_10072710 | 3300014968 | Bacteria | 3077 |
| 54 | Ga0157376_10009779 | 3300014969 | Bacteria | 6986 |
| 55 | Ga0206350_10022811 | 3300020080 | Bacteria | 1963 |
| 56 | Ga0207653_10000107 | 3300025885 | Bacteria | 59076 |
| 57 | Ga0207705_10012988 | 3300025909 | Bacteria | 6010 |
| 58 | Ga0207705_10056996 | 3300025909 | Bacteria | 2818 |
| 59 | Ga0207684_10044775 | 3300025910 | Bacteria | 3753 |
| 60 | Ga0207695_10103417 | 3300025913 | Unclassified | 2839 |
| 61 | Ga0207660_10030909 | 3300025917 | Unclassified | 3683 |
| 62 | Ga0207657_10018367 | 3300025919 | Bacteria | 6678 |
| 63 | Ga0207652_10061529 | 3300025921 | Unclassified | 3242 |
| 64 | Ga0207646_10076309 | 3300025922 | Bacteria | 2994 |
| 65 | Ga0207694_10006735 | 3300025924 | Bacteria | 8727 |
| 66 | Ga0207659_10002107 | 3300025926 | Bacteria | 11787 |
| 67 | Ga0207686_10042505 | 3300025934 | Bacteria | 2779 |
| 68 | Ga0207689_10065817 | 3300025942 | Bacteria | 2981 |
| 69 | Ga0207667_10156390 | 3300025949 | Unclassified | 2345 |
| 70 | Ga0207712_10007445 | 3300025961 | Bacteria | 6912 |
| 71 | Ga0207703_10013484 | 3300026035 | Bacteria | 6367 |
| 72 | Ga0207702_10065724 | 3300026078 | Bacteria | 3107 |
| 73 | Ga0268266_10000046 | 3300028379 | Bacteria | 312745 |
| 74 | Ga0268266_10017059 | 3300028379 | Bacteria | 6201 |
| 75 | Ga0268264_10060151 | 3300028381 | Bacteria | 3184 |
| 76 | Ga0265334_10021482 | 3300028573 | Bacteria | 2635 |
| 77 | Ga0265318_10000016 | 3300028577 | Bacteria | 184782 |
| 78 | Ga0265323_10006263 | 3300028653 | Bacteria | 5008 |
| 79 | Ga0265336_10011846 | 3300028666 | Bacteria | 2950 |
| 80 | Ga0265336_10023770 | 3300028666 | Bacteria | 1940 |
| 81 | Ga0265338_10000343 | 3300028800 | Bacteria | 84846 |
| 82 | Ga0265338_10000529 | 3300028800 | Bacteria | 67074 |
| 83 | Ga0265338_10001550 | 3300028800 | Bacteria | 37131 |
| 84 | Ga0307511_10002338 | 3300030521 | Bacteria | 19808 |
| 85 | Ga0265760_10009064 | 3300031090 | Unclassified | 2844 |
| 86 | Ga0265320_10001234 | 3300031240 | Bacteria | 18768 |
| 87 | Ga0265320_10017504 | 3300031240 | Bacteria | 3975 |
| 88 | Ga0265339_10051080 | 3300031249 | Bacteria | 2258 |
| 89 | Ga0265327_10000088 | 3300031251 | Bacteria | 198019 |
| 90 | Ga0265327_10000417 | 3300031251 | Bacteria | 77684 |
| 91 | Ga0265327_10002437 | 3300031251 | Bacteria | 19635 |
| 92 | Ga0265316_10017511 | 3300031344 | Bacteria | 6188 |
| 93 | Ga0265316_10021340 | 3300031344 | Bacteria | 5486 |
| 94 | Ga0265313_10001144 | 3300031595 | Bacteria | 25330 |
| 95 | Ga0307508_10000329 | 3300031616 | Bacteria | 57297 |
| 96 | Ga0265314_10010628 | 3300031711 | Bacteria | 7659 |
| 97 | Ga0373937_0078754 | 3300036401 | Bacteria | 3046 |
| 98 | Ga0400484_12150 | 3300038725 | Bacteria | 13880 |
| 99 | Ga0400489_62676 | 3300039093 | Bacteria | 11652 |
| 100 | Ga0436360_0852999 | 3300039438 | Bacteria | 3066 |
| 101 | Ga0451577_0089819 | 3300042876 | Bacteria | 2742 |
| 102 | Ga0453684_0002517 | 3300044712 | Bacteria | 44176 |
| 103 | Ga0453684_0032741 | 3300044712 | Bacteria | 7264 |
| 104 | Ga0453684_0057512 | 3300044712 | Bacteria | 5032 |
| 105 | Ga0451576_0000379 | 3300045051 | Bacteria | 104282 |
| 106 | Ga0495592_0001520 | 3300046454 | Bacteria | 16167 |
| 107 | Ga0495651_0008280 | 3300046462 | Bacteria | 7968 |
| 108 | Ga0495651_0144551 | 3300046462 | Bacteria | 1721 |
| 109 | Ga0495580_0027340 | 3300046472 | Bacteria | 4151 |
| 110 | Ga0495664_0000136 | 3300046477 | Bacteria | 36895 |
| 111 | Ga0495608_0010170 | 3300046511 | Bacteria | 6565 |
| 112 | Ga0495608_0026103 | 3300046511 | Bacteria | 3985 |
| 113 | Ga0495616_0002670 | 3300046513 | Bacteria | 11699 |
| 114 | Ga0495618_0000007 | 3300046514 | Bacteria | 204689 |
| 115 | Ga0495628_0014339 | 3300046516 | Bacteria | 6644 |
| 116 | Ga0495630_0000186 | 3300046517 | Bacteria | 48315 |
| 117 | Ga0495630_0044461 | 3300046517 | Bacteria | 3319 |
| 118 | Ga0495643_0000354 | 3300046522 | Bacteria | 62431 |
| 119 | Ga0495652_0015676 | 3300046529 | Bacteria | 6783 |
| 120 | Ga0495652_0088837 | 3300046529 | Bacteria | 2532 |
| 121 | Ga0495665_0000172 | 3300046531 | Bacteria | 32790 |
| 122 | Ga0495640_0000011 | 3300046533 | Bacteria | 204678 |
| 123 | Ga0495640_0076693 | 3300046533 | Bacteria | 2230 |
| 124 | Ga0495586_0000002 | 3300046535 | Bacteria | 204678 |
| 125 | Ga0495586_0000050 | 3300046535 | Bacteria | 70669 |
| 126 | Ga0495587_0001513 | 3300046536 | Bacteria | 15459 |
| 127 | Ga0495645_0033104 | 3300046543 | Bacteria | 3770 |
| 128 | Ga0495645_0038913 | 3300046543 | Bacteria | 3469 |
| 129 | Ga0495634_0000004 | 3300046642 | Bacteria | 204762 |
| 130 | Ga0495599_0012428 | 3300046678 | Bacteria | 5247 |
| 131 | Ga0495624_0064863 | 3300046690 | Bacteria | 2282 |
| 132 | Ga0495600_0003246 | 3300046809 | Bacteria | 9518 |
| 133 | Ga0495604_0001714 | 3300047317 | Bacteria | 17971 |
| 134 | Ga0495674_0000017 | 3300047319 | Bacteria | 204693 |
| 135 | Ga0495674_0006656 | 3300047319 | Bacteria | 11074 |
| 136 | Ga0495674_0026543 | 3300047319 | Bacteria | 5299 |
| 137 | Ga0495674_0039103 | 3300047319 | Bacteria | 4253 |
| 138 | Ga0495680_0010358 | 3300047322 | Bacteria | 8320 |
| 139 | Ga0495675_0000652 | 3300047444 | Bacteria | 21999 |
| 140 | Ga0495675_0007492 | 3300047444 | Bacteria | 6722 |
| 141 | Ga0495684_0005043 | 3300047471 | Bacteria | 10307 |
| 142 | Ga0495684_0073086 | 3300047471 | Bacteria | 2605 |
| 143 | Ga0496102_0054710 | 3300048905 | Bacteria | 3640 |
| 144 | Ga0496106_0013598 | 3300048909 | Bacteria | 6008 |
| 145 | Ga0501032_0017141 | 3300049569 | Bacteria | 5091 |
| 146 | Ga0501046_0008473 | 3300049580 | Bacteria | 8958 |
| 147 | Ga0501046_0060350 | 3300049580 | Bacteria | 2967 |
| 148 | Ga0501035_0051156 | 3300049822 | Bacteria | 3700 |
| 149 | nmdc:mga05p37_118995_c1 | 3300050507 | Bacteria | 3245 |
| 150 | nmdc:mga05p37_11966_c1 | 3300050507 | Bacteria | 6027 |
| 151 | nmdc:mga05p37_165493_c1 | 3300050507 | Unclassified | 2699 |
| 152 | nmdc:mga05p37_1944_c1 | 3300050507 | Bacteria | 24081 |
| 153 | nmdc:mga05p37_33843_c1 | 3300050507 | Bacteria | 6259 |
| 154 | nmdc:mga06r32_44268_c1 | 3300050510 | Bacteria | 4238 |
| 155 | nmdc:mga0n895_23042_c1 | 3300050512 | Bacteria | 5848 |
| 156 | nmdc:mga0n895_4079_c1 | 3300050512 | Bacteria | 11895 |
| 157 | nmdc:mga0n895_49692_c1 | 3300050512 | Bacteria | 4110 |
| 158 | nmdc:mga0rr50_20993_c1 | 3300050513 | Bacteria | 4450 |
| 159 | nmdc:mga0rr50_35093_c1 | 3300050513 | Bacteria | 3599 |
| 160 | nmdc:mga0rr50_6996_c1 | 3300050513 | Bacteria | 6922 |
| 161 | nmdc:mga08x19_54941_c1 | 3300050514 | Unclassified | 2565 |
| 162 | nmdc:mga08x19_70539_c1 | 3300050514 | Bacteria | 2277 |
| 163 | nmdc:mga0a205_17245_c1 | 3300050515 | Bacteria | 6765 |
| 164 | nmdc:mga0a205_30360_c1 | 3300050515 | Bacteria | 5175 |
| 165 | Ga0495601_0006978 | 3300053077 | Bacteria | 6615 |
| 166 | Ga0500641_0001117 | 3300053096 | Bacteria | 9546 |
| 167 | Ga0500607_000181 | 3300053121 | Bacteria | 56273 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049569 | Ga0501032_0017141 | Ga0501032_0017141_2299_3885 | 466 |
| 2 | 3300046462 | Ga0495651_0144551 | Ga0495651_0144551_64_1692 | 478 |
| 3 | 3300053121 | Ga0500607_000181 | Ga0500607_000181_51154_53226 | 478 |
| 4 | 3300005406 | Ga0070703_10000712 | Ga0070703_100007123 | 483 |
| 5 | 3300005467 | Ga0070706_100036610 | Ga0070706_1000366102 | 483 |
| 6 | 3300006844 | Ga0075428_100069758 | Ga0075428_1000697582 | 483 |
| 7 | 3300025885 | Ga0207653_10000107 | Ga0207653_1000010733 | 483 |
| 8 | 3300050512 | nmdc:mga0n895_23042_c1 | nmdc:mga0n895_23042_c1_2305_4104 | 483 |
| 9 | 3300050513 | nmdc:mga0rr50_20993_c1 | nmdc:mga0rr50_20993_c1_470_2269 | 483 |
| 10 | 3300005467 | Ga0070706_100098812 | Ga0070706_1000988122 | 484 |
| 11 | 3300005468 | Ga0070707_100030333 | Ga0070707_1000303332 | 484 |
| 12 | 3300025910 | Ga0207684_10044775 | Ga0207684_100447751 | 484 |
| 13 | 3300025922 | Ga0207646_10076309 | Ga0207646_100763092 | 484 |
| 14 | 3300044712 | Ga0453684_0057512 | Ga0453684_0057512_1184_3250 | 491 |
| 15 | 3300050507 | nmdc:mga05p37_1944_c1 | nmdc:mga05p37_1944_c1_9412_11232 | 492 |
| 16 | 3300050512 | nmdc:mga0n895_49692_c1 | nmdc:mga0n895_49692_c1_425_2245 | 492 |
| 17 | 3300050513 | nmdc:mga0rr50_35093_c1 | nmdc:mga0rr50_35093_c1_1370_3157 | 492 |
| 18 | 3300050515 | nmdc:mga0a205_30360_c1 | nmdc:mga0a205_30360_c1_143_1963 | 492 |
| 19 | 3300028666 | Ga0265336_10023770 | Ga0265336_100237701 | 493 |
| 20 | 3300048905 | Ga0496102_0054710 | Ga0496102_0054710_431_2239 | 493 |
| 21 | 3300048909 | Ga0496106_0013598 | Ga0496106_0013598_14_1822 | 493 |
| 22 | 3300005444 | Ga0070694_100008886 | Ga0070694_1000088863 | 495 |
| 23 | 3300005549 | Ga0070704_100058079 | Ga0070704_1000580791 | 495 |
| 24 | 3300025917 | Ga0207660_10030909 | Ga0207660_100309092 | 495 |
| 25 | 3300044712 | Ga0453684_0032741 | Ga0453684_0032741_4387_6195 | 495 |
| 26 | 3300005445 | Ga0070708_100170330 | Ga0070708_1001703301 | 496 |
| 27 | 3300006914 | Ga0075436_100043181 | Ga0075436_1000431813 | 496 |
| 28 | 3300031251 | Ga0265327_10000088 | Ga0265327_100000885 | 497 |
| 29 | 3300039093 | Ga0400489_62676 | Ga0400489_62676_7252_9018 | 497 |
| 30 | 3300050514 | nmdc:mga08x19_54941_c1 | nmdc:mga08x19_54941_c1_491_2305 | 497 |
| 31 | 3300013306 | Ga0163162_10063573 | Ga0163162_100635732 | 499 |
| 32 | 3300042876 | Ga0451577_0089819 | Ga0451577_0089819_539_2362 | 499 |
| 33 | 3300006871 | Ga0075434_100005162 | Ga0075434_1000051622 | 500 |
| 34 | 3300046513 | Ga0495616_0002670 | Ga0495616_0002670_6578_8494 | 500 |
| 35 | 3300046522 | Ga0495643_0000354 | Ga0495643_0000354_35040_36956 | 500 |
| 36 | 3300050512 | nmdc:mga0n895_4079_c1 | nmdc:mga0n895_4079_c1_2345_4168 | 500 |
| 37 | 3300050514 | nmdc:mga08x19_70539_c1 | nmdc:mga08x19_70539_c1_98_1921 | 500 |
| 38 | 3300050515 | nmdc:mga0a205_17245_c1 | nmdc:mga0a205_17245_c1_1392_3215 | 500 |
| 39 | 3300053096 | Ga0500641_0001117 | Ga0500641_0001117_1591_3501 | 500 |
| 40 | 3300009147 | Ga0114129_10148056 | Ga0114129_101480562 | 502 |
| 41 | 3300050507 | nmdc:mga05p37_165493_c1 | nmdc:mga05p37_165493_c1_447_2222 | 502 |
| 42 | 3300003320 | rootH2_10009480 | rootH2_100094804 | 503 |
| 43 | 3300046462 | Ga0495651_0008280 | Ga0495651_0008280_170_1984 | 503 |
| 44 | 3300046511 | Ga0495608_0026103 | Ga0495608_0026103_1559_3373 | 503 |
| 45 | 3300046516 | Ga0495628_0014339 | Ga0495628_0014339_4293_6107 | 503 |
| 46 | 3300046529 | Ga0495652_0015676 | Ga0495652_0015676_345_2159 | 503 |
| 47 | 3300046536 | Ga0495587_0001513 | Ga0495587_0001513_6457_8271 | 503 |
| 48 | 3300046678 | Ga0495599_0012428 | Ga0495599_0012428_3151_4965 | 503 |
| 49 | 3300046690 | Ga0495624_0064863 | Ga0495624_0064863_25_1923 | 503 |
| 50 | 3300046809 | Ga0495600_0003246 | Ga0495600_0003246_7130_8944 | 503 |
| 51 | 3300047317 | Ga0495604_0001714 | Ga0495604_0001714_5574_7388 | 503 |
| 52 | 3300047319 | Ga0495674_0026543 | Ga0495674_0026543_1317_3131 | 503 |
| 53 | 3300047322 | Ga0495680_0010358 | Ga0495680_0010358_6092_7906 | 503 |
| 54 | 3300047444 | Ga0495675_0000652 | Ga0495675_0000652_13065_14879 | 503 |
| 55 | 3300009098 | Ga0105245_10050631 | Ga0105245_100506313 | 505 |
| 56 | 3300009553 | Ga0105249_10123423 | Ga0105249_101234231 | 505 |
| 57 | 3300031240 | Ga0265320_10001234 | Ga0265320_1000123413 | 505 |
| 58 | 3300009094 | Ga0111539_10090118 | Ga0111539_100901183 | 506 |
| 59 | 3300014745 | Ga0157377_10051012 | Ga0157377_100510121 | 506 |
| 60 | 3300028577 | Ga0265318_10000016 | Ga0265318_1000001634 | 506 |
| 61 | 3300031240 | Ga0265320_10017504 | Ga0265320_100175043 | 506 |
| 62 | 3300031344 | Ga0265316_10017511 | Ga0265316_100175113 | 506 |
| 63 | 3300031595 | Ga0265313_10001144 | Ga0265313_1000114415 | 506 |
| 64 | 3300014969 | Ga0157376_10009779 | Ga0157376_100097792 | 507 |
| 65 | 3300005548 | Ga0070665_100001205 | Ga0070665_10000120519 | 508 |
| 66 | 3300005842 | Ga0068858_100004427 | Ga0068858_10000442715 | 508 |
| 67 | 3300025926 | Ga0207659_10002107 | Ga0207659_100021073 | 508 |
| 68 | 3300025934 | Ga0207686_10042505 | Ga0207686_100425052 | 508 |
| 69 | 3300028379 | Ga0268266_10017059 | Ga0268266_100170591 | 508 |
| 70 | 3300009147 | Ga0114129_10095909 | Ga0114129_100959092 | 509 |
| 71 | 3300028666 | Ga0265336_10011846 | Ga0265336_100118463 | 509 |
| 72 | 3300046454 | Ga0495592_0001520 | Ga0495592_0001520_7252_9084 | 510 |
| 73 | 3300046543 | Ga0495645_0038913 | Ga0495645_0038913_42_1874 | 510 |
| 74 | 3300009177 | Ga0105248_10069864 | Ga0105248_100698642 | 511 |
| 75 | 3300009553 | Ga0105249_10006709 | Ga0105249_100067093 | 511 |
| 76 | 3300013296 | Ga0157374_10043064 | Ga0157374_100430643 | 511 |
| 77 | 3300014325 | Ga0163163_10102881 | Ga0163163_101028812 | 511 |
| 78 | 3300014968 | Ga0157379_10072710 | Ga0157379_100727102 | 511 |
| 79 | 3300025961 | Ga0207712_10007445 | Ga0207712_100074459 | 511 |
| 80 | 3300009177 | Ga0105248_10194448 | Ga0105248_101944482 | 512 |
| 81 | 3300009551 | Ga0105238_10011773 | Ga0105238_100117736 | 512 |
| 82 | 3300025924 | Ga0207694_10006735 | Ga0207694_100067357 | 512 |
| 83 | 3300028800 | Ga0265338_10000529 | Ga0265338_1000052913 | 512 |
| 84 | 3300031249 | Ga0265339_10051080 | Ga0265339_100510802 | 512 |
| 85 | 3300031711 | Ga0265314_10010628 | Ga0265314_100106283 | 512 |
| 86 | 3300009147 | Ga0114129_10002174 | Ga0114129_1000217412 | 513 |
| 87 | 3300046472 | Ga0495580_0027340 | Ga0495580_0027340_1706_3535 | 513 |
| 88 | 3300046477 | Ga0495664_0000136 | Ga0495664_0000136_2697_4526 | 513 |
| 89 | 3300046511 | Ga0495608_0010170 | Ga0495608_0010170_4410_6239 | 513 |
| 90 | 3300046514 | Ga0495618_0000007 | Ga0495618_0000007_180470_182299 | 513 |
| 91 | 3300046531 | Ga0495665_0000172 | Ga0495665_0000172_17552_19381 | 513 |
| 92 | 3300046533 | Ga0495640_0000011 | Ga0495640_0000011_146101_147930 | 513 |
| 93 | 3300046535 | Ga0495586_0000002 | Ga0495586_0000002_196035_197864 | 513 |
| 94 | 3300046642 | Ga0495634_0000004 | Ga0495634_0000004_135056_136885 | 513 |
| 95 | 3300047319 | Ga0495674_0000017 | Ga0495674_0000017_188668_190497 | 513 |
| 96 | 3300047444 | Ga0495675_0007492 | Ga0495675_0007492_167_1996 | 513 |
| 97 | 3300047471 | Ga0495684_0005043 | Ga0495684_0005043_6687_8516 | 513 |
| 98 | 3300050507 | nmdc:mga05p37_11966_c1 | nmdc:mga05p37_11966_c1_4177_5991 | 513 |
| 99 | 3300053077 | Ga0495601_0006978 | Ga0495601_0006978_1841_3670 | 513 |
| 100 | 3300031090 | Ga0265760_10009064 | Ga0265760_100090642 | 516 |
| 101 | 3300020080 | Ga0206350_10022811 | Ga0206350_100228111 | 517 |
| 102 | 3300039438 | Ga0436360_0852999 | Ga0436360_0852999_741_2573 | 517 |
| 103 | 3300005843 | Ga0068860_100000078 | Ga0068860_10000007850 | 518 |
| 104 | 3300030521 | Ga0307511_10002338 | Ga0307511_100023389 | 519 |
| 105 | 3300031251 | Ga0265327_10000417 | Ga0265327_1000041760 | 520 |
| 106 | 3300005327 | Ga0070658_10038456 | Ga0070658_100384561 | 521 |
| 107 | 3300005344 | Ga0070661_100098456 | Ga0070661_1000984561 | 521 |
| 108 | 3300005563 | Ga0068855_100052698 | Ga0068855_1000526982 | 521 |
| 109 | 3300009551 | Ga0105238_10078906 | Ga0105238_100789062 | 521 |
| 110 | 3300013105 | Ga0157369_10007986 | Ga0157369_100079863 | 521 |
| 111 | 3300013307 | Ga0157372_10012123 | Ga0157372_100121233 | 521 |
| 112 | 3300025909 | Ga0207705_10012988 | Ga0207705_100129883 | 521 |
| 113 | 3300025909 | Ga0207705_10056996 | Ga0207705_100569962 | 521 |
| 114 | 3300025919 | Ga0207657_10018367 | Ga0207657_100183674 | 521 |
| 115 | 3300044712 | Ga0453684_0002517 | Ga0453684_0002517_41510_43573 | 522 |
| 116 | 3300050513 | nmdc:mga0rr50_6996_c1 | nmdc:mga0rr50_6996_c1_4819_6663 | 523 |
| 117 | 3300006847 | Ga0075431_100006631 | Ga0075431_1000066319 | 525 |
| 118 | 3300009147 | Ga0114129_10016689 | Ga0114129_100166894 | 525 |
| 119 | 3300028800 | Ga0265338_10000343 | Ga0265338_1000034326 | 525 |
| 120 | 3300050507 | nmdc:mga05p37_33843_c1 | nmdc:mga05p37_33843_c1_4391_6202 | 525 |
| 121 | 3300038725 | Ga0400484_12150 | Ga0400484_12150_4330_6141 | 527 |
| 122 | 3300005440 | Ga0070705_100047641 | Ga0070705_1000476412 | 530 |
| 123 | 3300005445 | Ga0070708_100050723 | Ga0070708_1000507232 | 530 |
| 124 | 3300009147 | Ga0114129_10072003 | Ga0114129_100720036 | 530 |
| 125 | 3300025942 | Ga0207689_10065817 | Ga0207689_100658172 | 530 |
| 126 | 3300028381 | Ga0268264_10060151 | Ga0268264_100601512 | 530 |
| 127 | 3300050507 | nmdc:mga05p37_118995_c1 | nmdc:mga05p37_118995_c1_878_2641 | 530 |
| 128 | 3300050510 | nmdc:mga06r32_44268_c1 | nmdc:mga06r32_44268_c1_2459_4222 | 530 |
| 129 | 3300005544 | Ga0070686_100004763 | Ga0070686_1000047633 | 532 |
| 130 | 3300005842 | Ga0068858_100001119 | Ga0068858_1000011195 | 534 |
| 131 | 3300026035 | Ga0207703_10013484 | Ga0207703_100134842 | 534 |
| 132 | 3300025949 | Ga0207667_10156390 | Ga0207667_101563901 | 536 |
| 133 | 3300046517 | Ga0495630_0000186 | Ga0495630_0000186_27699_29498 | 536 |
| 134 | 3300046533 | Ga0495640_0076693 | Ga0495640_0076693_304_2103 | 536 |
| 135 | 3300046535 | Ga0495586_0000050 | Ga0495586_0000050_68574_70373 | 536 |
| 136 | 3300047319 | Ga0495674_0006656 | Ga0495674_0006656_482_2281 | 536 |
| 137 | 3300005458 | Ga0070681_10015936 | Ga0070681_100159367 | 537 |
| 138 | 3300009551 | Ga0105238_10121845 | Ga0105238_101218452 | 537 |
| 139 | 3300026078 | Ga0207702_10065724 | Ga0207702_100657242 | 537 |
| 140 | 3300028573 | Ga0265334_10021482 | Ga0265334_100214821 | 537 |
| 141 | 3300028800 | Ga0265338_10001550 | Ga0265338_1000155033 | 538 |
| 142 | 3300031251 | Ga0265327_10002437 | Ga0265327_100024373 | 538 |
| 143 | 3300003320 | rootH2_10020202 | rootH2_100202023 | 539 |
| 144 | 3300036401 | Ga0373937_0078754 | Ga0373937_0078754_1207_3021 | 539 |
| 145 | 3300046517 | Ga0495630_0044461 | Ga0495630_0044461_124_1938 | 539 |
| 146 | 3300046529 | Ga0495652_0088837 | Ga0495652_0088837_165_1979 | 539 |
| 147 | 3300046543 | Ga0495645_0033104 | Ga0495645_0033104_459_2273 | 539 |
| 148 | 3300047319 | Ga0495674_0039103 | Ga0495674_0039103_524_2338 | 539 |
| 149 | 3300047471 | Ga0495684_0073086 | Ga0495684_0073086_306_2120 | 539 |
| 150 | 3300005548 | Ga0070665_100000037 | Ga0070665_10000003755 | 542 |
| 151 | 3300009093 | Ga0105240_10002396 | Ga0105240_1000239626 | 542 |
| 152 | 3300028379 | Ga0268266_10000046 | Ga0268266_10000046201 | 542 |
| 153 | 3300005614 | Ga0068856_100049265 | Ga0068856_1000492655 | 543 |
| 154 | 3300009093 | Ga0105240_10054509 | Ga0105240_100545094 | 544 |
| 155 | 3300025913 | Ga0207695_10103417 | Ga0207695_101034173 | 544 |
| 156 | 3300003323 | rootH1_10008769 | rootH1_100087691 | 551 |
| 157 | 3300005530 | Ga0070679_100044003 | Ga0070679_1000440033 | 559 |
| 158 | 3300025921 | Ga0207652_10061529 | Ga0207652_100615291 | 559 |
| 159 | 3300045051 | Ga0451576_0000379 | Ga0451576_0000379_20508_22448 | 570 |
| 160 | 3300049822 | Ga0501035_0051156 | Ga0501035_0051156_44_2002 | 571 |
| 161 | 3300049580 | Ga0501046_0060350 | Ga0501046_0060350_809_2854 | 573 |
| 162 | 3300005329 | Ga0070683_100028021 | Ga0070683_1000280212 | 576 |
| 163 | 3300028653 | Ga0265323_10006263 | Ga0265323_100062631 | 576 |
| 164 | 3300031344 | Ga0265316_10021340 | Ga0265316_100213403 | 576 |
| 165 | 3300049580 | Ga0501046_0008473 | Ga0501046_0008473_6068_8005 | 577 |
| 166 | 3300031616 | Ga0307508_10000329 | Ga0307508_1000032944 | 579 |
| 167 | 3300003320 | rootH2_10001221 | rootH2_100012211 | 583 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4fvj-assembly2.cif.gz_B | spfh domain of the mouse stomatin (crystal form 2) | 0.7439 | 359 | 485 |
| 4fvj-assembly2.cif.gz_B | spfh domain of the mouse stomatin (crystal form 2) | 0.7057 | 359 | 485 |
| 7mfm-assembly1.cif.gz_A | glutamate synthase, glutamate dehydrogenase counter-enzyme complex | 0.7027 | 364 | 403 |
| 7w7r-assembly2.cif.gz_D-3 | high resolution structure of a fish aquaporin reveals a novel extracellular fold. | 0.6629 | 1 | 70 |
| 1win-assembly1.cif.gz_A | solution structure of the band 7 domain of the mouse flotillin 2 protein | 0.6418 | 359 | 491 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A4HYE6_38_161_3.30.479.30 | Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain | 0.8806 | 359 | 495 | 3.30.479.30 |
| af_Q6K550_45_154_3.30.479.30 | Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain | 0.8591 | 361 | 484 | 3.30.479.30 |
| af_O49460_91_184_3.30.479.30 | Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain | 0.8462 | 388 | 483 | 3.30.479.30 |
| af_A4HYE6_38_161_3.30.479.30 | Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain | 0.8419 | 359 | 495 | 3.30.479.30 |
| af_O49460_91_184_3.30.479.30 | Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain | 0.8384 | 388 | 483 | 3.30.479.30 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6P0NAR8-F1-model_v4 | Uncharacterized protein | 0.9811 | 79 | 360 |
|
| AF-A0A6P0ZII2-F1-model_v4 | deleted | 0.9774 | 75 | 349 |
|
| AF-A0A6L9ZCS3-F1-model_v4 | Flotillin family protein | 0.9698 | 77 | 206 |
|
| AF-A0A519LUU4-F1-model_v4 | Flotillin family protein | 0.9657 | 117 | 495 |
|
| AF-A0A6P0JN02-F1-model_v4 | deleted | 0.964 | 77 | 206 |
|
Predicted Structure (AlphaFold2)
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