F248917
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 166 | 133 | 159 | 222 |
Family's Representative Sequence
| Representative Sequence | 3300044656|Ga0466969_0067966|Ga0466969_0067966_163_858 |
| Length | 231 |
| Sequence | MGMTASSTLPGGPWQGLFHHALTLIDEIRKHGTSHPFWTFGGGTVLMLRHGHRVSKDVDIFVPDPQYLGYVNPRISDAASDITSNYEEHAGFVKLMLPDGEIDFVVSRNLTSPGYDEWTLMDRVVKVETSAEIVAKKMWHRGDRPTARDLFDLCLVIEREPESLMEAGAFLVRHRDTFLRLLNEHRAFVRPRFDDLRTLGYTPSFDYCVELADAFLRKLPGGTPEPKSRRR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2501025502 | Paraburkholderia unamae MTI-641 | Isolate | Rhizosphere |
| 2 | 2510917013 | Paraburkholderia unamae MTI-641 | Isolate | Rhizosphere |
| 3 | 2585428058 | Methylibium sp. CF468 | Isolate | Rhizosphere |
| 4 | 2738541280 | Massilia sp. GV090 | Isolate | Unclassified |
| 5 | 2901300506 | Cupriavidus sp. UYMSc13B | Isolate | Unclassified |
| 6 | 2928163908 | Burkholderia sp. 567 | Isolate | Unclassified |
| 7 | 2941489479 | Lysobacter enzymogenes 2943 | Isolate | Rhizosphere |
| 8 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 9 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 10 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 11 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 12 | 3300003758 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 | Metagenome | Endosphere |
| 13 | 3300003760 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 | Metagenome | Endosphere |
| 14 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 15 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 16 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 17 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 18 | 3300003773 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 | Metagenome | Endosphere |
| 19 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 20 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 21 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 22 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 23 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 26 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 27 | 3300006058 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Metagenome | Rhizosphere |
| 28 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 29 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 30 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 31 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 32 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 33 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 34 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 35 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 36 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 43 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 45 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 46 | 3300025228 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 47 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 49 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 50 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 51 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 53 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 55 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 56 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 57 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 58 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 64 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 65 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 66 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 67 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 68 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 69 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 70 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 71 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 72 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 73 | 3300041459 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG | Metagenome | Rhizoplane |
| 74 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 75 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 76 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 77 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 78 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 79 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 80 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 81 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 82 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 83 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 84 | 3300046452 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046664 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 104 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 105 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 106 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 107 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 108 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 109 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 110 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 111 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049766 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought | Metagenome | Rhizosphere |
| 115 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 117 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 118 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 119 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 120 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 121 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 122 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 124 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 125 | 3300053079 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere | Metagenome | Endosphere |
| 126 | 3300053118 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere | Metagenome | Endosphere |
| 127 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 128 | 3300053146 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere | Metagenome | Endosphere |
| 129 | 3300053178 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere | Metagenome | Endosphere |
| 130 | 3300053724 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere | Metagenome | Endosphere |
| 131 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 132 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 133 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.78 |
| Metatranscriptomes | 0 |
| Isolates | 4.22 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 30.12 |
| Nodule | 1.2 |
| Rhizoplane | 1.2 |
| Rhizosphere | 59.04 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 8.43 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24740J21852_10012688 | 3300001979 | Bacteria | 3169 |
| 2 | JGI25154J39366_1000952 | 3300002738 | Bacteria | 11996 |
| 3 | rootL2_10162108 | 3300003322 | Bacteria | 2653 |
| 4 | rootH1_10019218 | 3300003323 | Bacteria | 3951 |
| 5 | rootH1_10113409 | 3300003323 | Bacteria | 2325 |
| 6 | Ga0055532_1003889 | 3300003758 | Bacteria | 2396 |
| 7 | Ga0055527_1002004 | 3300003760 | Bacteria | 3699 |
| 8 | Ga0055535_1000223 | 3300003761 | Bacteria | 60083 |
| 9 | Ga0055542_1000257 | 3300003762 | Bacteria | 60083 |
| 10 | Ga0055529_1000286 | 3300003763 | Bacteria | 60083 |
| 11 | Ga0055526_1000005 | 3300003771 | Bacteria | 344542 |
| 12 | Ga0055537_1000026 | 3300003773 | Bacteria | 105126 |
| 13 | Ga0055537_1000048 | 3300003773 | Bacteria | 87588 |
| 14 | Ga0055524_1000005 | 3300003775 | Bacteria | 344542 |
| 15 | Ga0055534_1000002 | 3300003784 | Bacteria | 390762 |
| 16 | Ga0055528_1000002 | 3300003790 | Bacteria | 368879 |
| 17 | Ga0068869_100051256 | 3300005334 | Bacteria | 2994 |
| 18 | Ga0070659_100001822 | 3300005366 | Bacteria | 15332 |
| 19 | Ga0070678_100050763 | 3300005456 | Bacteria | 3003 |
| 20 | Ga0075363_100002380 | 3300006048 | Bacteria | 7662 |
| 21 | Ga0075363_100046111 | 3300006048 | Bacteria | 2312 |
| 22 | Ga0075364_10001015 | 3300006051 | Bacteria | 14889 |
| 23 | Ga0075432_10009572 | 3300006058 | Bacteria | 3301 |
| 24 | Ga0075362_10016523 | 3300006177 | Bacteria | 3024 |
| 25 | Ga0075367_10131417 | 3300006178 | Bacteria | 1547 |
| 26 | Ga0075366_10068382 | 3300006195 | Bacteria | 2113 |
| 27 | Ga0075370_10002299 | 3300006353 | Bacteria | 8811 |
| 28 | Ga0075370_10024800 | 3300006353 | Bacteria | 3315 |
| 29 | Ga0075430_100047447 | 3300006846 | Bacteria | 3627 |
| 30 | Ga0075430_100186205 | 3300006846 | Bacteria | 1726 |
| 31 | Ga0075434_100514767 | 3300006871 | Bacteria | 1217 |
| 32 | Ga0075434_101482213 | 3300006871 | Bacteria | 688 |
| 33 | Ga0079104_1024433 | 3300006946 | Bacteria | 1591 |
| 34 | Ga0099794_10030303 | 3300007265 | Bacteria | 2526 |
| 35 | Ga0105245_10029596 | 3300009098 | Bacteria | 4840 |
| 36 | Ga0114129_10748407 | 3300009147 | Bacteria | 1251 |
| 37 | Ga0105241_10872354 | 3300009174 | Bacteria | 834 |
| 38 | Ga0105239_10224663 | 3300010375 | Bacteria | 2106 |
| 39 | Ga0157370_10121009 | 3300013104 | Bacteria | 2444 |
| 40 | Ga0157369_10248213 | 3300013105 | Bacteria | 1858 |
| 41 | Ga0182008_10000035 | 3300014497 | Bacteria | 136502 |
| 42 | Ga0157376_10001868 | 3300014969 | Bacteria | 14047 |
| 43 | Ga0182005_1018206 | 3300015265 | Bacteria | 1941 |
| 44 | Ga0213872_10000760 | 3300021361 | Bacteria | 23712 |
| 45 | Ga0213872_10133942 | 3300021361 | Bacteria | 1090 |
| 46 | Ga0209672_100063 | 3300025228 | Bacteria | 204903 |
| 47 | Ga0209147_100077 | 3300025229 | Bacteria | 205964 |
| 48 | Ga0209437_105288 | 3300025233 | Bacteria | 2206 |
| 49 | Ga0209258_100105 | 3300025242 | Bacteria | 207862 |
| 50 | Ga0209646_1000042 | 3300025246 | Bacteria | 343923 |
| 51 | Ga0209148_1000107 | 3300025254 | Bacteria | 207862 |
| 52 | Ga0209565_1000001 | 3300025263 | Bacteria | 2950419 |
| 53 | Ga0209455_1000100 | 3300025272 | Bacteria | 207862 |
| 54 | Ga0209673_1000001 | 3300025273 | Bacteria | 3176258 |
| 55 | Ga0209675_1000001 | 3300025291 | Bacteria | 2950293 |
| 56 | Ga0209564_1000001 | 3300025295 | Bacteria | 3176258 |
| 57 | Ga0209564_1013912 | 3300025295 | Bacteria | 3381 |
| 58 | Ga0209256_1000006 | 3300025299 | Bacteria | 1250310 |
| 59 | Ga0209256_1012526 | 3300025299 | Bacteria | 3232 |
| 60 | Ga0207647_10090770 | 3300025904 | Bacteria | 1822 |
| 61 | Ga0207671_10616521 | 3300025914 | Bacteria | 865 |
| 62 | Ga0207687_10050297 | 3300025927 | Bacteria | 2900 |
| 63 | Ga0207690_10005611 | 3300025932 | Bacteria | 7416 |
| 64 | Ga0207683_10069697 | 3300026121 | Bacteria | 3105 |
| 65 | Ga0209281_1019630 | 3300027111 | Bacteria | 1333 |
| 66 | Ga0265328_10014341 | 3300031239 | Bacteria | 3122 |
| 67 | Ga0307408_100099584 | 3300031548 | Bacteria | 2212 |
| 68 | Ga0307514_10200060 | 3300031649 | Unclassified | 1257 |
| 69 | Ga0307412_10127681 | 3300031911 | Bacteria | 1842 |
| 70 | Ga0307510_10000311 | 3300033180 | Bacteria | 44908 |
| 71 | Ga0395899_0000029 | 3300037312 | Bacteria | 329371 |
| 72 | Ga0395900_0000085 | 3300037418 | Bacteria | 172265 |
| 73 | Ga0395898_0000086 | 3300037466 | Bacteria | 239895 |
| 74 | Ga0436361_0626465 | 3300039447 | Bacteria | 1127 |
| 75 | Ga0436361_0843870 | 3300039447 | Bacteria | 15818 |
| 76 | Ga0451800_1459991 | 3300041459 | Bacteria | 942 |
| 77 | Ga0439432_107179 | 3300042006 | Bacteria | 833 |
| 78 | Ga0466969_0067966 | 3300044656 | Bacteria | 1718 |
| 79 | Ga0466965_0086472 | 3300044683 | Bacteria | 1590 |
| 80 | Ga0466966_0000042 | 3300044684 | Bacteria | 96648 |
| 81 | Ga0466966_0007134 | 3300044684 | Bacteria | 7406 |
| 82 | Ga0466966_0014079 | 3300044684 | Bacteria | 5296 |
| 83 | Ga0466961_0001802 | 3300044693 | Bacteria | 13279 |
| 84 | Ga0466961_0041339 | 3300044693 | Bacteria | 2955 |
| 85 | Ga0466963_0008592 | 3300044694 | Bacteria | 6130 |
| 86 | Ga0466970_0045494 | 3300044765 | Bacteria | 2337 |
| 87 | Ga0466970_0057024 | 3300044765 | Bacteria | 2088 |
| 88 | Ga0466959_0045300 | 3300045049 | Bacteria | 3239 |
| 89 | Ga0451576_0011227 | 3300045051 | Bacteria | 10203 |
| 90 | Ga0451576_0146491 | 3300045051 | Bacteria | 2462 |
| 91 | Ga0451576_1402191 | 3300045051 | Unclassified | 727 |
| 92 | Ga0466958_0007550 | 3300045836 | Bacteria | 5986 |
| 93 | Ga0495617_008752 | 3300046452 | Bacteria | 3485 |
| 94 | Ga0495584_0000016 | 3300046491 | Bacteria | 156560 |
| 95 | Ga0495585_0203299 | 3300046492 | Bacteria | 1007 |
| 96 | Ga0495607_0002862 | 3300046501 | Bacteria | 13669 |
| 97 | Ga0495607_0013660 | 3300046501 | Bacteria | 5311 |
| 98 | Ga0495607_0017381 | 3300046501 | Bacteria | 4619 |
| 99 | Ga0495610_0000178 | 3300046512 | Bacteria | 70748 |
| 100 | Ga0495648_0002429 | 3300046524 | Bacteria | 17266 |
| 101 | Ga0495648_0067964 | 3300046524 | Bacteria | 2082 |
| 102 | Ga0495654_0039326 | 3300046530 | Bacteria | 2362 |
| 103 | Ga0495609_0000344 | 3300046538 | Bacteria | 41031 |
| 104 | Ga0495597_0016215 | 3300046542 | Bacteria | 3520 |
| 105 | Ga0495633_0000041 | 3300046558 | Bacteria | 176298 |
| 106 | Ga0495656_0006337 | 3300046615 | Bacteria | 4147 |
| 107 | Ga0495611_0001370 | 3300046648 | Bacteria | 12265 |
| 108 | Ga0495625_0001244 | 3300046660 | Bacteria | 32170 |
| 109 | Ga0495625_0031135 | 3300046660 | Bacteria | 3971 |
| 110 | Ga0495625_0106008 | 3300046660 | Bacteria | 1925 |
| 111 | Ga0495659_0000053 | 3300046664 | Bacteria | 51215 |
| 112 | Ga0495661_0177689 | 3300046665 | Bacteria | 1130 |
| 113 | Ga0495671_0000110 | 3300046692 | Bacteria | 73703 |
| 114 | Ga0495660_0001549 | 3300046810 | Bacteria | 15463 |
| 115 | Ga0495672_0000023 | 3300047320 | Bacteria | 419080 |
| 116 | Ga0495672_0005128 | 3300047320 | Bacteria | 10449 |
| 117 | Ga0495686_0096700 | 3300047472 | Bacteria | 1787 |
| 118 | Ga0496105_0159025 | 3300048908 | Bacteria | 1855 |
| 119 | Ga0496117_0141737 | 3300048920 | Bacteria | 1438 |
| 120 | Ga0496118_0001889 | 3300048921 | Bacteria | 29895 |
| 121 | Ga0496118_0096711 | 3300048921 | Bacteria | 2011 |
| 122 | Ga0496124_0107512 | 3300048927 | Bacteria | 2250 |
| 123 | Ga0501047_0336644 | 3300049581 | Bacteria | 1347 |
| 124 | Ga0501071_0278169 | 3300049587 | Bacteria | 1266 |
| 125 | Ga0501072_0067828 | 3300049588 | Bacteria | 2815 |
| 126 | Ga0501072_0102599 | 3300049588 | Bacteria | 2274 |
| 127 | Ga0501072_0605472 | 3300049588 | Bacteria | 864 |
| 128 | Ga0501076_0104718 | 3300049592 | Bacteria | 2283 |
| 129 | Ga0501079_0842303 | 3300049741 | Bacteria | 722 |
| 130 | Ga0501080_0148089 | 3300049742 | Bacteria | 2170 |
| 131 | Ga0501080_0242736 | 3300049742 | Bacteria | 1644 |
| 132 | Ga0501081_0329518 | 3300049743 | Bacteria | 1123 |
| 133 | Ga0501269_000186 | 3300049766 | Bacteria | 19114 |
| 134 | Ga0501045_0171388 | 3300049824 | Bacteria | 1616 |
| 135 | nmdc:mga03683_7415_c1 | 3300050489 | Bacteria | 3808 |
| 136 | nmdc:mga03n38_48087_c1 | 3300050490 | Bacteria | 1891 |
| 137 | nmdc:mga03n38_6223_c1 | 3300050490 | Bacteria | 4129 |
| 138 | nmdc:mga0yw44_30725_c1 | 3300050492 | Bacteria | 3117 |
| 139 | nmdc:mga0k408_14143_c1 | 3300050493 | Bacteria | 4391 |
| 140 | nmdc:mga0k408_190116_c1 | 3300050493 | Bacteria | 1225 |
| 141 | nmdc:mga0k408_82508_c1 | 3300050493 | Bacteria | 1884 |
| 142 | nmdc:mga06z11_62521_c1 | 3300050494 | Bacteria | 1945 |
| 143 | nmdc:mga07m45_13594_c1 | 3300050496 | Bacteria | 4323 |
| 144 | nmdc:mga07m45_27800_c1 | 3300050496 | Bacteria | 3119 |
| 145 | nmdc:mga07m45_28469_c1 | 3300050496 | Bacteria | 3084 |
| 146 | nmdc:mga05p37_611356_c1 | 3300050507 | Bacteria | 1228 |
| 147 | nmdc:mga0qj67_159309_c1 | 3300050509 | Bacteria | 1832 |
| 148 | nmdc:mga0qj67_249927_c1 | 3300050509 | Unclassified | 1439 |
| 149 | nmdc:mga0n895_816619_c1 | 3300050512 | Bacteria | 922 |
| 150 | Ga0500610_0000338 | 3300053079 | Bacteria | 14149 |
| 151 | Ga0500594_0002786 | 3300053118 | Bacteria | 3807 |
| 152 | Ga0500568_0015396 | 3300053139 | Bacteria | 3425 |
| 153 | Ga0500568_0047774 | 3300053139 | Bacteria | 1694 |
| 154 | Ga0500588_0077216 | 3300053146 | Unclassified | 1106 |
| 155 | Ga0500637_0000949 | 3300053178 | Bacteria | 11777 |
| 156 | Ga0500570_064231 | 3300053724 | Bacteria | 1757 |
| 157 | Ga0501084_0585073 | 3300054114 | Bacteria | 943 |
| 158 | Ga0466962_0003976 | 3300061719 | Bacteria | 7079 |
| 159 | Ga0530510_0121573 | 3300061734 | Bacteria | 1917 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300025228 | Ga0209672_100063 | Ga0209672_10006362 | 185 |
| 2 | 3300025229 | Ga0209147_100077 | Ga0209147_10007762 | 185 |
| 3 | 3300025242 | Ga0209258_100105 | Ga0209258_10010562 | 185 |
| 4 | 3300025254 | Ga0209148_1000107 | Ga0209148_100010762 | 185 |
| 5 | 3300025272 | Ga0209455_1000100 | Ga0209455_100010062 | 185 |
| 6 | 3300006871 | Ga0075434_100514767 | Ga0075434_1005147672 | 200 |
| 7 | 3300009147 | Ga0114129_10748407 | Ga0114129_107484072 | 200 |
| 8 | 3300013104 | Ga0157370_10121009 | Ga0157370_101210091 | 200 |
| 9 | 3300050507 | nmdc:mga05p37_611356_c1 | nmdc:mga05p37_611356_c1_253_891 | 200 |
| 10 | 3300050512 | nmdc:mga0n895_816619_c1 | nmdc:mga0n895_816619_c1_41_679 | 200 |
| 11 | 3300050493 | nmdc:mga0k408_190116_c1 | nmdc:mga0k408_190116_c1_572_1201 | 204 |
| 12 | 3300007265 | Ga0099794_10030303 | Ga0099794_100303031 | 205 |
| 13 | 3300025295 | Ga0209564_1013912 | Ga0209564_10139121 | 205 |
| 14 | 3300025299 | Ga0209256_1012526 | Ga0209256_10125264 | 205 |
| 15 | iso_pu_bacteria | 2585428058 | 2587736932 | 212 |
| 16 | 3300006871 | Ga0075434_101482213 | Ga0075434_1014822131 | 214 |
| 17 | 3300045051 | Ga0451576_0011227 | Ga0451576_0011227_1815_2459 | 214 |
| 18 | 3300045051 | Ga0451576_1402191 | Ga0451576_1402191_65_709 | 214 |
| 19 | 3300049587 | Ga0501071_0278169 | Ga0501071_0278169_612_1256 | 214 |
| 20 | 3300049588 | Ga0501072_0102599 | Ga0501072_0102599_496_1140 | 214 |
| 21 | 3300049741 | Ga0501079_0842303 | Ga0501079_0842303_39_683 | 214 |
| 22 | 3300049742 | Ga0501080_0148089 | Ga0501080_0148089_627_1271 | 214 |
| 23 | 3300053139 | Ga0500568_0047774 | Ga0500568_0047774_648_1292 | 214 |
| 24 | 3300054114 | Ga0501084_0585073 | Ga0501084_0585073_129_773 | 214 |
| 25 | 3300045051 | Ga0451576_0146491 | Ga0451576_0146491_397_1044 | 215 |
| 26 | 3300049588 | Ga0501072_0605472 | Ga0501072_0605472_13_660 | 215 |
| 27 | 3300006048 | Ga0075363_100002380 | Ga0075363_1000023805 | 216 |
| 28 | 3300006048 | Ga0075363_100046111 | Ga0075363_1000461112 | 216 |
| 29 | 3300006051 | Ga0075364_10001015 | Ga0075364_100010153 | 216 |
| 30 | 3300006177 | Ga0075362_10016523 | Ga0075362_100165233 | 216 |
| 31 | 3300006178 | Ga0075367_10131417 | Ga0075367_101314172 | 216 |
| 32 | 3300006195 | Ga0075366_10068382 | Ga0075366_100683822 | 216 |
| 33 | 3300006353 | Ga0075370_10024800 | Ga0075370_100248004 | 216 |
| 34 | 3300006946 | Ga0079104_1024433 | Ga0079104_10244332 | 216 |
| 35 | 3300027111 | Ga0209281_1019630 | Ga0209281_10196302 | 216 |
| 36 | 3300050489 | nmdc:mga03683_7415_c1 | nmdc:mga03683_7415_c1_1977_2648 | 216 |
| 37 | 3300050490 | nmdc:mga03n38_48087_c1 | nmdc:mga03n38_48087_c1_903_1559 | 216 |
| 38 | 3300050490 | nmdc:mga03n38_6223_c1 | nmdc:mga03n38_6223_c1_622_1293 | 216 |
| 39 | 3300050492 | nmdc:mga0yw44_30725_c1 | nmdc:mga0yw44_30725_c1_2020_2691 | 216 |
| 40 | 3300050493 | nmdc:mga0k408_14143_c1 | nmdc:mga0k408_14143_c1_13_684 | 216 |
| 41 | 3300050493 | nmdc:mga0k408_82508_c1 | nmdc:mga0k408_82508_c1_164_820 | 216 |
| 42 | 3300050494 | nmdc:mga06z11_62521_c1 | nmdc:mga06z11_62521_c1_789_1460 | 216 |
| 43 | 3300050496 | nmdc:mga07m45_27800_c1 | nmdc:mga07m45_27800_c1_681_1337 | 216 |
| 44 | iso_pu_bacteria | 2941489479 | 2941492521 | 216 |
| 45 | 3300006058 | Ga0075432_10009572 | Ga0075432_100095723 | 217 |
| 46 | 3300044683 | Ga0466965_0086472 | Ga0466965_0086472_532_1188 | 217 |
| 47 | 3300044765 | Ga0466970_0057024 | Ga0466970_0057024_208_864 | 217 |
| 48 | 3300046660 | Ga0495625_0001244 | Ga0495625_0001244_28664_29338 | 217 |
| 49 | 3300048927 | Ga0496124_0107512 | Ga0496124_0107512_426_1100 | 217 |
| 50 | 3300049581 | Ga0501047_0336644 | Ga0501047_0336644_450_1103 | 217 |
| 51 | 3300053139 | Ga0500568_0015396 | Ga0500568_0015396_768_1421 | 217 |
| 52 | 3300006353 | Ga0075370_10002299 | Ga0075370_100022999 | 218 |
| 53 | 3300006846 | Ga0075430_100186205 | Ga0075430_1001862052 | 218 |
| 54 | 3300021361 | Ga0213872_10000760 | Ga0213872_1000076024 | 218 |
| 55 | 3300031911 | Ga0307412_10127681 | Ga0307412_101276812 | 218 |
| 56 | 3300039447 | Ga0436361_0843870 | Ga0436361_0843870_1709_2383 | 218 |
| 57 | 3300044684 | Ga0466966_0007134 | Ga0466966_0007134_3042_3701 | 218 |
| 58 | 3300044693 | Ga0466961_0041339 | Ga0466961_0041339_1659_2318 | 218 |
| 59 | 3300044765 | Ga0466970_0045494 | Ga0466970_0045494_349_1008 | 218 |
| 60 | 3300049588 | Ga0501072_0067828 | Ga0501072_0067828_509_1165 | 218 |
| 61 | 3300049592 | Ga0501076_0104718 | Ga0501076_0104718_824_1480 | 218 |
| 62 | 3300049742 | Ga0501080_0242736 | Ga0501080_0242736_747_1403 | 218 |
| 63 | 3300049743 | Ga0501081_0329518 | Ga0501081_0329518_414_1070 | 218 |
| 64 | 3300049824 | Ga0501045_0171388 | Ga0501045_0171388_454_1110 | 218 |
| 65 | 3300050496 | nmdc:mga07m45_13594_c1 | nmdc:mga07m45_13594_c1_3441_4118 | 218 |
| 66 | 3300050509 | nmdc:mga0qj67_159309_c1 | nmdc:mga0qj67_159309_c1_345_1004 | 218 |
| 67 | 3300061734 | Ga0530510_0121573 | Ga0530510_0121573_534_1190 | 218 |
| 68 | 3300005334 | Ga0068869_100051256 | Ga0068869_1000512563 | 219 |
| 69 | 3300009098 | Ga0105245_10029596 | Ga0105245_100295963 | 219 |
| 70 | 3300014969 | Ga0157376_10001868 | Ga0157376_1000186817 | 219 |
| 71 | 3300021361 | Ga0213872_10133942 | Ga0213872_101339422 | 219 |
| 72 | 3300025927 | Ga0207687_10050297 | Ga0207687_100502973 | 219 |
| 73 | 3300039447 | Ga0436361_0626465 | Ga0436361_0626465_142_801 | 219 |
| 74 | 3300041459 | Ga0451800_1459991 | Ga0451800_1459991_114_773 | 219 |
| 75 | 3300046524 | Ga0495648_0067964 | Ga0495648_0067964_1303_2025 | 219 |
| 76 | 3300053118 | Ga0500594_0002786 | Ga0500594_0002786_1420_2124 | 219 |
| 77 | iso_pu_bacteria | 2501025502 | 2501082406 | 219 |
| 78 | iso_pu_bacteria | 2510917013 | 2511086251 | 219 |
| 79 | 3300009174 | Ga0105241_10872354 | Ga0105241_108723541 | 220 |
| 80 | 3300014497 | Ga0182008_10000035 | Ga0182008_10000035104 | 220 |
| 81 | 3300031548 | Ga0307408_100099584 | Ga0307408_1000995843 | 220 |
| 82 | 3300049766 | Ga0501269_000186 | Ga0501269_000186_8190_8870 | 220 |
| 83 | 3300003323 | rootH1_10113409 | rootH1_101134093 | 221 |
| 84 | 3300037312 | Ga0395899_0000029 | Ga0395899_0000029_232993_233658 | 221 |
| 85 | 3300037418 | Ga0395900_0000085 | Ga0395900_0000085_95714_96379 | 221 |
| 86 | 3300037466 | Ga0395898_0000086 | Ga0395898_0000086_95714_96379 | 221 |
| 87 | 3300044684 | Ga0466966_0000042 | Ga0466966_0000042_95041_95706 | 221 |
| 88 | 3300044693 | Ga0466961_0001802 | Ga0466961_0001802_6219_6884 | 221 |
| 89 | 3300044694 | Ga0466963_0008592 | Ga0466963_0008592_1181_1852 | 221 |
| 90 | 3300045049 | Ga0466959_0045300 | Ga0466959_0045300_2489_3160 | 221 |
| 91 | 3300045836 | Ga0466958_0007550 | Ga0466958_0007550_5056_5727 | 221 |
| 92 | 3300046452 | Ga0495617_008752 | Ga0495617_008752_1647_2330 | 221 |
| 93 | 3300046492 | Ga0495585_0203299 | Ga0495585_0203299_260_943 | 221 |
| 94 | 3300046501 | Ga0495607_0002862 | Ga0495607_0002862_6550_7233 | 221 |
| 95 | 3300046660 | Ga0495625_0031135 | Ga0495625_0031135_1432_2115 | 221 |
| 96 | 3300046660 | Ga0495625_0106008 | Ga0495625_0106008_403_1107 | 221 |
| 97 | 3300047320 | Ga0495672_0005128 | Ga0495672_0005128_5290_5973 | 221 |
| 98 | 3300053079 | Ga0500610_0000338 | Ga0500610_0000338_10238_10903 | 221 |
| 99 | 3300061719 | Ga0466962_0003976 | Ga0466962_0003976_5994_6659 | 221 |
| 100 | 3300003322 | rootL2_10162108 | rootL2_101621084 | 222 |
| 101 | 3300003323 | rootH1_10019218 | rootH1_100192184 | 222 |
| 102 | 3300025233 | Ga0209437_105288 | Ga0209437_1052883 | 222 |
| 103 | 3300031239 | Ga0265328_10014341 | Ga0265328_100143414 | 222 |
| 104 | 3300033180 | Ga0307510_10000311 | Ga0307510_100003115 | 222 |
| 105 | 3300046512 | Ga0495610_0000178 | Ga0495610_0000178_791_1486 | 222 |
| 106 | 3300046530 | Ga0495654_0039326 | Ga0495654_0039326_615_1319 | 222 |
| 107 | 3300046542 | Ga0495597_0016215 | Ga0495597_0016215_1748_2443 | 222 |
| 108 | 3300046664 | Ga0495659_0000053 | Ga0495659_0000053_30735_31430 | 222 |
| 109 | 3300046692 | Ga0495671_0000110 | Ga0495671_0000110_37503_38207 | 222 |
| 110 | 3300047320 | Ga0495672_0000023 | Ga0495672_0000023_390305_391000 | 222 |
| 111 | 3300047472 | Ga0495686_0096700 | Ga0495686_0096700_972_1688 | 222 |
| 112 | iso_pu_bacteria | 2738541280 | 2738737853 | 222 |
| 113 | 3300002738 | JGI25154J39366_1000952 | JGI25154J39366_10009529 | 223 |
| 114 | 3300025246 | Ga0209646_1000042 | Ga0209646_1000042145 | 223 |
| 115 | 3300025914 | Ga0207671_10616521 | Ga0207671_106165212 | 223 |
| 116 | 3300044684 | Ga0466966_0014079 | Ga0466966_0014079_872_1549 | 223 |
| 117 | 3300046491 | Ga0495584_0000016 | Ga0495584_0000016_119884_120591 | 223 |
| 118 | 3300046501 | Ga0495607_0013660 | Ga0495607_0013660_1478_2185 | 223 |
| 119 | 3300046615 | Ga0495656_0006337 | Ga0495656_0006337_2903_3610 | 223 |
| 120 | 3300046648 | Ga0495611_0001370 | Ga0495611_0001370_5113_5820 | 223 |
| 121 | 3300046665 | Ga0495661_0177689 | Ga0495661_0177689_274_981 | 223 |
| 122 | 3300006846 | Ga0075430_100047447 | Ga0075430_1000474475 | 224 |
| 123 | 3300046810 | Ga0495660_0001549 | Ga0495660_0001549_13707_14381 | 224 |
| 124 | 3300050509 | nmdc:mga0qj67_249927_c1 | nmdc:mga0qj67_249927_c1_67_741 | 224 |
| 125 | 3300053178 | Ga0500637_0000949 | Ga0500637_0000949_7200_7874 | 224 |
| 126 | iso_pu_bacteria | 2901300506 | 2901313305 | 224 |
| 127 | 3300003771 | Ga0055526_1000005 | Ga0055526_1000005141 | 225 |
| 128 | 3300003773 | Ga0055537_1000026 | Ga0055537_100002667 | 225 |
| 129 | 3300003773 | Ga0055537_1000048 | Ga0055537_100004813 | 225 |
| 130 | 3300003775 | Ga0055524_1000005 | Ga0055524_1000005142 | 225 |
| 131 | 3300003784 | Ga0055534_1000002 | Ga0055534_1000002187 | 225 |
| 132 | 3300003790 | Ga0055528_1000002 | Ga0055528_1000002187 | 225 |
| 133 | 3300005456 | Ga0070678_100050763 | Ga0070678_1000507634 | 225 |
| 134 | 3300025263 | Ga0209565_1000001 | Ga0209565_1000001638 | 225 |
| 135 | 3300025273 | Ga0209673_1000001 | Ga0209673_1000001638 | 225 |
| 136 | 3300025291 | Ga0209675_1000001 | Ga0209675_10000011894 | 225 |
| 137 | 3300025295 | Ga0209564_1000001 | Ga0209564_10000012056 | 225 |
| 138 | 3300025299 | Ga0209256_1000006 | Ga0209256_1000006492 | 225 |
| 139 | 3300026121 | Ga0207683_10069697 | Ga0207683_100696974 | 225 |
| 140 | 3300042006 | Ga0439432_107179 | Ga0439432_107179_82_780 | 225 |
| 141 | 3300053146 | Ga0500588_0077216 | Ga0500588_0077216_23_700 | 225 |
| 142 | iso_pu_bacteria | 2928163908 | 2928170432 | 225 |
| 143 | 3300050496 | nmdc:mga07m45_28469_c1 | nmdc:mga07m45_28469_c1_2186_2881 | 226 |
| 144 | 3300005366 | Ga0070659_100001822 | Ga0070659_1000018222 | 227 |
| 145 | 3300025932 | Ga0207690_10005611 | Ga0207690_100056119 | 227 |
| 146 | 3300031649 | Ga0307514_10200060 | Ga0307514_102000601 | 227 |
| 147 | 3300046538 | Ga0495609_0000344 | Ga0495609_0000344_12907_13653 | 227 |
| 148 | 3300048921 | Ga0496118_0001889 | Ga0496118_0001889_24150_24839 | 227 |
| 149 | 3300053724 | Ga0500570_064231 | Ga0500570_064231_975_1679 | 227 |
| 150 | 3300046501 | Ga0495607_0017381 | Ga0495607_0017381_921_1679 | 228 |
| 151 | 3300046524 | Ga0495648_0002429 | Ga0495648_0002429_3764_4513 | 228 |
| 152 | 3300046558 | Ga0495633_0000041 | Ga0495633_0000041_66654_67403 | 228 |
| 153 | 3300001979 | JGI24740J21852_10012688 | JGI24740J21852_100126884 | 229 |
| 154 | 3300003758 | Ga0055532_1003889 | Ga0055532_10038891 | 229 |
| 155 | 3300003760 | Ga0055527_1002004 | Ga0055527_10020043 | 229 |
| 156 | 3300003761 | Ga0055535_1000223 | Ga0055535_10002232 | 229 |
| 157 | 3300003762 | Ga0055542_1000257 | Ga0055542_10002572 | 229 |
| 158 | 3300003763 | Ga0055529_1000286 | Ga0055529_10002862 | 229 |
| 159 | 3300010375 | Ga0105239_10224663 | Ga0105239_102246633 | 229 |
| 160 | 3300013105 | Ga0157369_10248213 | Ga0157369_102482132 | 229 |
| 161 | 3300015265 | Ga0182005_1018206 | Ga0182005_10182063 | 229 |
| 162 | 3300025904 | Ga0207647_10090770 | Ga0207647_100907701 | 229 |
| 163 | 3300044656 | Ga0466969_0067966 | Ga0466969_0067966_163_858 | 229 |
| 164 | 3300048908 | Ga0496105_0159025 | Ga0496105_0159025_131_826 | 229 |
| 165 | 3300048920 | Ga0496117_0141737 | Ga0496117_0141737_523_1218 | 229 |
| 166 | 3300048921 | Ga0496118_0096711 | Ga0496118_0096711_291_986 | 229 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2i7r-assembly1.cif.gz_B | conserved domain protein | 0.6422 | 52 | 109 |
| 3g12-assembly1.cif.gz_A | crystal structure of a putative lactoylglutathione lyase from bdellovibrio bacteriovorus | 0.6316 | 52 | 108 |
| 1o22-assembly1.cif.gz_A-2 | crystal structure of an orphan protein (tm0875) from thermotoga maritima at 2.00 a resolution | 0.5956 | 84 | 104 |
| 3g12-assembly1.cif.gz_B | crystal structure of a putative lactoylglutathione lyase from bdellovibrio bacteriovorus | 0.5944 | 52 | 108 |
| 4hx0-assembly1.cif.gz_A | crystal structure of a putative nucleotidyltransferase (tm1012) from thermotoga maritima at 1.87 a resolution | 0.5936 | 13 | 127 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3oumA00 | Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.5815 | 54 | 115 | 3.10.180.10 |
| 3wfqH01 | Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 | 0.5512 | 22 | 109 | 3.30.460.10 |
| 2ewrA00 | Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2; | 0.5041 | 14 | 183 | 3.30.460.40 |
| 2ewrA00 | Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2; | 0.4913 | 14 | 183 | 3.30.460.40 |
| af_Q12028_1_632_1.25.10.10 | Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant | 0.4811 | 129 | 214 | 1.25.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A5C7UKK3-F1-model_v4 | Nucleotidyl transferase AbiEii/AbiGii toxin family protein | 0.9838 | 45 | 215 |
|
| AF-A0A6N1BDY0-F1-model_v4 | deleted | 0.9789 | 1 | 217 |
|
| AF-A0A484Y1L7-F1-model_v4 | Uncharacterized protein | 0.9785 | 105 | 217 |
|
| AF-A0A0D0GP41-F1-model_v4 | Nucleotidyl transferase AbiEii/AbiGii toxin family protein | 0.9757 | 7 | 165 |
|
| AF-A0A316IEX4-F1-model_v4 | Nucleotidyltransferase AbiEii toxin of type IV toxin-antitoxin system | 0.967 | 45 | 218 |
GO:0016740
|
Predicted Structure (AlphaFold2)
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