F248313

General Info

Members Datasets Scaffolds Average Seq Length
166 111 332 351

Family's Representative Sequence

Representative Sequence 3300009176|Ga0105242_10201971|Ga0105242_102019712
Length 385
Sequence MPVAPVKITLRGLFIEMICISELKSKVFLPLHLMAEVISIEDFVQLHRDGRVAFDARSPGEFEHGRIPGALSLPLLNNDERAQVGTIYKQKGHDAAVLKGFDLVGGKFGDYIRKAKELSKEKQVTLYCWRGGMRSNIMAWLLEKGGFHVTLIRGGYKSYRRWALSQLAKNRNIVIVGGMTGSGKTDLLLELERSGEQVIDLEGLAHHKGSAFGALGQKPQPTIEQFENELALRWHKLDADKITWIENESRSIGSMIVPAHVYELMCKAPMIEVLLDRKKRSERILNEYGSFSKEVLIANTKKLEKRLGGLRLKEALEKLESGLMTEWVDIMLDYYDGLYRYGIEQREGKAVHKMVVEFDDIRTDALMMKQLADRIVFAGLQTEEK

Samples

Sample ID Description Type Environment
1 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
11 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
12 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
13 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
14 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
15 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
20 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
21 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
44 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
45 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
46 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
47 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
48 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
49 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
53 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
55 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
75 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
76 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
77 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
78 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
79 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
82 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
83 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
84 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
85 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
86 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
87 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
88 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
89 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
90 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
91 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
92 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
93 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
94 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
95 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
96 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
97 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
98 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
99 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
100 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
101 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
102 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
103 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
104 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
105 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
106 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
107 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
108 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
109 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
110 2738541283 Pedobacter sp. OK701 Isolate Unclassified
111 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.19
Metatranscriptomes 0.6
Isolates 1.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.27
Nodule 0
Rhizoplane 0
Rhizosphere 75.9
Stem 0
Stem Tuber 0
Unclassified 7.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105242_10201971 3300009176 Unclassified 1766
2 JGI25162J39368_1000949 3300002737 Bacteria 18576
3 JGI25164J39214_1001592 3300002772 Bacteria 4821
4 JGI25165J46597_1000729 3300003214 Bacteria 25759
5 JGI25153J46596_10018348 3300003215 Bacteria 2722
6 rootH1_10104771 3300003316 Bacteria 4896
7 rootH2_10014894 3300003320 Bacteria 31967
8 rootH2_10017634 3300003320 Bacteria 8830
9 rootH2_10032006 3300003320 Bacteria 2105
10 rootH2_10102006 3300003320 Bacteria 5942
11 rootL2_10321574 3300003322 Bacteria 2522
12 rootH1_10003183 3300003323 Bacteria 11325
13 rootH1_10013902 3300003323 Bacteria 30115
14 JGI25160J50197_1001135 3300003354 Bacteria 13613
15 Ga0055526_1009915 3300003771 Bacteria 4512
16 Ga0055528_1000228 3300003790 Bacteria 46963
17 Ga0055530_10002008 3300003791 Bacteria 13786
18 Ga0055543_1011220 3300004625 Unclassified 1844
19 Ga0058862_12604203 3300004803 Bacteria 4180
20 Ga0065165_1000017 3300005262 Bacteria 278286
21 Ga0065714_10066998 3300005288 Bacteria 6017
22 Ga0070658_10052723 3300005327 Bacteria 3300
23 Ga0070680_100001130 3300005336 Bacteria 19149
24 Ga0068868_100252614 3300005338 Unclassified 1484
25 Ga0070660_100049835 3300005339 Bacteria 3221
26 Ga0070679_100037231 3300005530 Bacteria 4832
27 Ga0068853_100011482 3300005539 Bacteria 7198
28 Ga0068853_100229948 3300005539 Unclassified 1696
29 Ga0068855_100000224 3300005563 Bacteria 72367
30 Ga0068855_100064891 3300005563 Bacteria 4258
31 Ga0068855_100115830 3300005563 Bacteria 3072
32 Ga0068855_100367453 3300005563 Bacteria 1582
33 Ga0068857_100013232 3300005577 Bacteria 7190
34 Ga0068856_100026120 3300005614 Bacteria 5694
35 Ga0068856_100058386 3300005614 Bacteria 3810
36 Ga0068856_100059613 3300005614 Bacteria 3770
37 Ga0068852_100000123 3300005616 Bacteria 52266
38 Ga0068860_100019884 3300005843 Bacteria 6512
39 Ga0081540_1009958 3300005983 Bacteria 6482
40 Ga0105240_10001228 3300009093 Bacteria 44551
41 Ga0105240_10001248 3300009093 Bacteria 44154
42 Ga0105240_10010649 3300009093 Bacteria 12914
43 Ga0105240_10152396 3300009093 Bacteria 2752
44 Ga0105240_10239953 3300009093 Unclassified 2102
45 Ga0105240_10243114 3300009093 Unclassified 2086
46 Ga0114129_10001600 3300009147 Bacteria 30778
47 Ga0105241_10081624 3300009174 Bacteria 2533
48 Ga0105237_10000126 3300009545 Bacteria 107192
49 Ga0105237_10001523 3300009545 Bacteria 30382
50 Ga0105237_10013169 3300009545 Bacteria 8677
51 Ga0105237_10035473 3300009545 Bacteria 5047
52 Ga0105237_10070788 3300009545 Bacteria 3483
53 Ga0105237_10081169 3300009545 Bacteria 3233
54 Ga0105238_10005944 3300009551 Bacteria 12096
55 Ga0105238_10033209 3300009551 Bacteria 5252
56 Ga0105238_10161225 3300009551 Bacteria 2218
57 Ga0105238_10210275 3300009551 Bacteria 1921
58 Ga0105239_10000064 3300010375 Bacteria 151674
59 Ga0105239_10001204 3300010375 Bacteria 35365
60 Ga0105239_10002029 3300010375 Bacteria 26273
61 Ga0105239_10077978 3300010375 Bacteria 3646
62 Ga0105239_10516797 3300010375 Unclassified 1358
63 Ga0157373_10055011 3300013100 Bacteria 2827
64 Ga0157370_10000865 3300013104 Bacteria 38427
65 Ga0157370_10014286 3300013104 Bacteria 8127
66 Ga0157370_10093760 3300013104 Bacteria 2817
67 Ga0157374_10000009 3300013296 Bacteria 564330
68 Ga0163162_10000394 3300013306 Bacteria 40017
69 Ga0157372_10000441 3300013307 Bacteria 45823
70 Ga0157372_10002784 3300013307 Bacteria 18902
71 Ga0182008_10000299 3300014497 Bacteria 38806
72 Ga0182008_10007788 3300014497 Bacteria 5892
73 Ga0182008_10017411 3300014497 Bacteria 3728
74 Ga0157376_10055838 3300014969 Bacteria 3297
75 Ga0182006_1003697 3300015261 Bacteria 7743
76 Ga0182007_10022627 3300015262 Bacteria 2217
77 Ga0207427_100071 3300025231 Bacteria 159974
78 Ga0209437_100021 3300025233 Bacteria 646400
79 Ga0209026_1007850 3300025250 Bacteria 2320
80 Ga0209233_1000035 3300025261 Bacteria 568478
81 Ga0209455_1003448 3300025272 Bacteria 5591
82 Ga0209673_1000083 3300025273 Bacteria 216509
83 Ga0209564_1001199 3300025295 Bacteria 29617
84 Ga0209564_1002771 3300025295 Bacteria 13142
85 Ga0209758_1001966 3300025297 Bacteria 22204
86 Ga0209758_1002401 3300025297 Bacteria 19229
87 Ga0209050_1000831 3300025298 Bacteria 42756
88 Ga0207426_1000550 3300025302 Bacteria 52064
89 Ga0209051_1041901 3300025303 Bacteria 1624
90 Ga0207647_10018411 3300025904 Bacteria 4725
91 Ga0207647_10112948 3300025904 Bacteria 1605
92 Ga0207705_10000028 3300025909 Bacteria 240636
93 Ga0207705_10051585 3300025909 Bacteria 2961
94 Ga0207654_10011021 3300025911 Bacteria 4601
95 Ga0207654_10146952 3300025911 Bacteria 1509
96 Ga0207707_10013767 3300025912 Bacteria 7054
97 Ga0207695_10001743 3300025913 Bacteria 34552
98 Ga0207695_10012274 3300025913 Bacteria 10290
99 Ga0207695_10028061 3300025913 Bacteria 6251
100 Ga0207695_10141966 3300025913 Bacteria 2349
101 Ga0207671_10000646 3300025914 Bacteria 45529
102 Ga0207671_10005090 3300025914 Bacteria 12271
103 Ga0207671_10006616 3300025914 Bacteria 10281
104 Ga0207671_10007215 3300025914 Bacteria 9679
105 Ga0207671_10224658 3300025914 Bacteria 1472
106 Ga0207660_10017607 3300025917 Bacteria 4750
107 Ga0207652_10028666 3300025921 Bacteria 4648
108 Ga0207652_10061705 3300025921 Bacteria 3238
109 Ga0207694_10038558 3300025924 Bacteria 3674
110 Ga0207694_10040259 3300025924 Bacteria 3597
111 Ga0207686_10043383 3300025934 Bacteria 2755
112 Ga0207667_10000266 3300025949 Bacteria 72382
113 Ga0207667_10000337 3300025949 Bacteria 64244
114 Ga0207667_10068079 3300025949 Bacteria 3708
115 Ga0207677_10262144 3300026023 Unclassified 1409
116 Ga0207639_10129646 3300026041 Unclassified 2086
117 Ga0207702_10074192 3300026078 Bacteria 2936
118 Ga0207702_10130330 3300026078 Bacteria 2262
119 Ga0207674_10008032 3300026116 Bacteria 12231
120 Ga0207698_10000290 3300026142 Bacteria 30465
121 Ga0268266_10000034 3300028379 Bacteria 354251
122 Ga0268264_10000117 3300028381 Bacteria 195037
123 Ga0268264_10000532 3300028381 Bacteria 48255
124 Ga0265334_10017817 3300028573 Bacteria 2930
125 Ga0316578_10060496 3300031728 Unclassified 2229
126 Ga0307414_10006832 3300032004 Bacteria 6383
127 Ga0307414_10026062 3300032004 Bacteria 3757
128 Ga0307414_10042392 3300032004 Bacteria 3092
129 Ga0307414_10190312 3300032004 Bacteria 1659
130 Ga0307510_10001047 3300033180 Bacteria 29363
131 Ga0316574_0011573 3300035398 Bacteria 5020
132 Ga0316574_0015837 3300035398 Bacteria 4380
133 Ga0316584_0146015 3300036712 Bacteria 1762
134 Ga0395900_0000155 3300037418 Bacteria 113606
135 Ga0466961_0054473 3300044693 Unclassified 2551
136 Ga0466971_0021649 3300044719 Bacteria 2861
137 Ga0466970_0039467 3300044765 Bacteria 2505
138 Ga0466959_0004256 3300045049 Bacteria 9545
139 Ga0451576_0010373 3300045051 Bacteria 10697
140 Ga0451576_0176753 3300045051 Unclassified 2229
141 Ga0466958_0051687 3300045836 Bacteria 2489
142 Ga0495585_0000328 3300046492 Bacteria 46534
143 Ga0495606_0003199 3300046507 Bacteria 17665
144 Ga0495648_0039188 3300046524 Bacteria 3018
145 Ga0495609_0009568 3300046538 Bacteria 4687
146 Ga0495622_0022541 3300046557 Bacteria 2935
147 Ga0495668_0000050 3300046616 Bacteria 214716
148 Ga0495611_0000102 3300046648 Bacteria 58620
149 Ga0495625_0000340 3300046660 Bacteria 71453
150 Ga0495661_0001031 3300046665 Bacteria 24752
151 Ga0495649_0024662 3300046694 Bacteria 3353
152 Ga0495660_0131710 3300046810 Bacteria 1254
153 Ga0495687_000135 3300047443 Bacteria 113460
154 Ga0495686_0047271 3300047472 Bacteria 2718
155 Ga0496122_0001441 3300048925 Bacteria 38496
156 Ga0496125_0033355 3300048928 Bacteria 4557
157 Ga0501033_0033015 3300049570 Bacteria 3887
158 nmdc:mga0k408_103070_c1 3300050493 Bacteria 1683
159 nmdc:mga05p37_2293_c1 3300050507 Bacteria 22300
160 Ga0500592_011326 3300053116 Bacteria 1426
161 Ga0500642_0003649 3300053130 Bacteria 4687
162 Ga0500561_0004918 3300053137 Bacteria 2444
163 Ga0500622_0001358 3300053156 Bacteria 19787
164 Ga0466962_0048147 3300061719 Bacteria 2037
165 2738756350 2738541283 Bacteria 7222293
166 2911139591 2911138879 Bacteria 5811561
167 Ga0105242_10201971
168 JGI25162J39368_1000949
169 JGI25164J39214_1001592
170 JGI25165J46597_1000729
171 JGI25153J46596_10018348
172 rootH1_10104771
173 rootH2_10014894
174 rootH2_10017634
175 rootH2_10032006
176 rootH2_10102006
177 rootL2_10321574
178 rootH1_10003183
179 rootH1_10013902
180 JGI25160J50197_1001135
181 Ga0055526_1009915
182 Ga0055528_1000228
183 Ga0055530_10002008
184 Ga0055543_1011220
185 Ga0058862_12604203
186 Ga0065165_1000017
187 Ga0065714_10066998
188 Ga0070658_10052723
189 Ga0070680_100001130
190 Ga0068868_100252614
191 Ga0070660_100049835
192 Ga0070679_100037231
193 Ga0068853_100011482
194 Ga0068853_100229948
195 Ga0068855_100000224
196 Ga0068855_100064891
197 Ga0068855_100115830
198 Ga0068855_100367453
199 Ga0068857_100013232
200 Ga0068856_100026120
201 Ga0068856_100058386
202 Ga0068856_100059613
203 Ga0068852_100000123
204 Ga0068860_100019884
205 Ga0081540_1009958
206 Ga0105240_10001228
207 Ga0105240_10001248
208 Ga0105240_10010649
209 Ga0105240_10152396
210 Ga0105240_10239953
211 Ga0105240_10243114
212 Ga0114129_10001600
213 Ga0105241_10081624
214 Ga0105237_10000126
215 Ga0105237_10001523
216 Ga0105237_10013169
217 Ga0105237_10035473
218 Ga0105237_10070788
219 Ga0105237_10081169
220 Ga0105238_10005944
221 Ga0105238_10033209
222 Ga0105238_10161225
223 Ga0105238_10210275
224 Ga0105239_10000064
225 Ga0105239_10001204
226 Ga0105239_10002029
227 Ga0105239_10077978
228 Ga0105239_10516797
229 Ga0157373_10055011
230 Ga0157370_10000865
231 Ga0157370_10014286
232 Ga0157370_10093760
233 Ga0157374_10000009
234 Ga0163162_10000394
235 Ga0157372_10000441
236 Ga0157372_10002784
237 Ga0182008_10000299
238 Ga0182008_10007788
239 Ga0182008_10017411
240 Ga0157376_10055838
241 Ga0182006_1003697
242 Ga0182007_10022627
243 Ga0207427_100071
244 Ga0209437_100021
245 Ga0209026_1007850
246 Ga0209233_1000035
247 Ga0209455_1003448
248 Ga0209673_1000083
249 Ga0209564_1001199
250 Ga0209564_1002771
251 Ga0209758_1001966
252 Ga0209758_1002401
253 Ga0209050_1000831
254 Ga0207426_1000550
255 Ga0209051_1041901
256 Ga0207647_10018411
257 Ga0207647_10112948
258 Ga0207705_10000028
259 Ga0207705_10051585
260 Ga0207654_10011021
261 Ga0207654_10146952
262 Ga0207707_10013767
263 Ga0207695_10001743
264 Ga0207695_10012274
265 Ga0207695_10028061
266 Ga0207695_10141966
267 Ga0207671_10000646
268 Ga0207671_10005090
269 Ga0207671_10006616
270 Ga0207671_10007215
271 Ga0207671_10224658
272 Ga0207660_10017607
273 Ga0207652_10028666
274 Ga0207652_10061705
275 Ga0207694_10038558
276 Ga0207694_10040259
277 Ga0207686_10043383
278 Ga0207667_10000266
279 Ga0207667_10000337
280 Ga0207667_10068079
281 Ga0207677_10262144
282 Ga0207639_10129646
283 Ga0207702_10074192
284 Ga0207702_10130330
285 Ga0207674_10008032
286 Ga0207698_10000290
287 Ga0268266_10000034
288 Ga0268264_10000117
289 Ga0268264_10000532
290 Ga0265334_10017817
291 Ga0316578_10060496
292 Ga0307414_10006832
293 Ga0307414_10026062
294 Ga0307414_10042392
295 Ga0307414_10190312
296 Ga0307510_10001047
297 Ga0316574_0011573
298 Ga0316574_0015837
299 Ga0316584_0146015
300 Ga0395900_0000155
301 Ga0466961_0054473
302 Ga0466971_0021649
303 Ga0466970_0039467
304 Ga0466959_0004256
305 Ga0451576_0010373
306 Ga0451576_0176753
307 Ga0466958_0051687
308 Ga0495585_0000328
309 Ga0495606_0003199
310 Ga0495648_0039188
311 Ga0495609_0009568
312 Ga0495622_0022541
313 Ga0495668_0000050
314 Ga0495611_0000102
315 Ga0495625_0000340
316 Ga0495661_0001031
317 Ga0495649_0024662
318 Ga0495660_0131710
319 Ga0495687_000135
320 Ga0495686_0047271
321 Ga0496122_0001441
322 Ga0496125_0033355
323 Ga0501033_0033015
324 nmdc:mga0k408_103070_c1
325 nmdc:mga05p37_2293_c1
326 Ga0500592_011326
327 Ga0500642_0003649
328 Ga0500561_0004918
329 Ga0500622_0001358
330 Ga0466962_0048147
331 2738756350
332 2911139591

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00581

Rhodanese

Rhodanese-like domain

39

162

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3g5j-assembly2.cif.gz_B crystal structure of n-terminal domain of putative atp/gtp binding protein from clostridium difficile 630 0.9388 3 129
3g5j-assembly2.cif.gz_B crystal structure of n-terminal domain of putative atp/gtp binding protein from clostridium difficile 630 0.918 3 129
3ntd-assembly1.cif.gz_A structure of the shewanella loihica pv-4 nadh-dependent persulfide reductase c531s mutant 0.8297 5 126
3nt6-assembly1.cif.gz_B structure of the shewanella loihica pv-4 nadh-dependent persulfide reductase c43s/c531s double mutant 0.7797 4 126
3nta-assembly1.cif.gz_B structure of the shewanella loihica pv-4 nadh-dependent persulfide reductase 0.7781 4 126
ID Description Score Start End Superfamily
af_Q60359_91_222_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9597 4 130 3.40.250.10
3g5jB00 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9347 3 129 3.40.250.10
af_Q60359_91_222_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9176 4 130 3.40.250.10
3g5jB00 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9138 3 129 3.40.250.10
af_P33667_5_134_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.8621 17 127 3.40.250.10
ID Description Score Start End GO Terms
AF-A0A699SK07-F1-model_v4 VOC domain-containing protein 0.9931 240 312
AF-A0A4Q5RMI3-F1-model_v4 tRNA 2-selenouridine(34) synthase MnmH 0.9929 145 344 GO:0002098
GO:0043828
AF-A0A3B8QN11-F1-model_v4 deleted 0.9848 17 136
AF-A0A1F3JYE7-F1-model_v4 tRNA 2-selenouridine(34) synthase MnmH 0.9838 1 340 GO:0002098
GO:0043828
AF-A0A3C0RCB1-F1-model_v4 tRNA 2-selenouridine(34) synthase MnmH 0.9836 4 301 GO:0002098
GO:0043828

Map