F248154

General Info

Members Datasets Scaffolds Average Seq Length
166 110 332 425

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100096650|Ga0075428_1000966502
Length 492
Sequence MAIGRPGRLARERTGRSEVIHRKRGQSVTENFPENGQAVVTSVRLGLRENLAQFSLLVIVNAFVGAMAGLERSILPAIAEQDFQLAARSGVLSFIVVFGVAKALTNYGAGRLSDRIGRKRVLVAGWLVAAPVPFLLMWAPTWHWVLFANVLLGISQGLTWSTTVIMKIDLVGAKQRGLAMGLNEFAGYMAVAASTLATGWVAATYRLRPEPFYLGVLFVVIGFILSALLVRETRDHAAHESGLPGRFSADDDVTPRQVFWRTTLIEPNLSSVSQAGLVNNLNDGMAWGLFPLVFAAAGMNLSQIAVLAAIYPGTWGMGQLVTGALSDRIGRKWLIVSGMWIQAAGIALVAVVNAFTPFVTGAVLLGVGTAMVYPTLLAAIGDVAHPSWRASAVGVYRLWRDLGYAVGALVAGLTADTFGLKAAMWLIAALTFASGAVSAARMSETLAAGHVPNGIHRRRPTIMGSPQFAAETQSREYAHGEHESARDDRKAD

Samples

Sample ID Description Type Environment
1 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
40 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
46 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
63 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
65 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
66 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
67 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
72 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
73 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
74 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
75 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
76 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
77 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
78 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
79 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
80 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
88 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
89 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
90 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
91 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
92 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
93 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
94 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
95 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
97 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
98 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
99 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
100 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
101 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
102 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
103 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
104 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
105 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
106 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
107 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
108 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
109 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
110 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.4
Metatranscriptomes 0
Isolates 0.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.01
Nodule 0
Rhizoplane 0
Rhizosphere 96.39
Stem 0
Stem Tuber 0
Unclassified 2.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075428_100096650 3300006844 Bacteria 3220
2 JGI24751J29686_10008736 3300002459 Unclassified 2076
3 Ga0070658_10127683 3300005327 Bacteria 2117
4 Ga0068869_100085384 3300005334 Bacteria 2364
5 Ga0070673_100062975 3300005364 Bacteria 2949
6 Ga0070688_100146963 3300005365 Bacteria 1607
7 Ga0070709_10026972 3300005434 Bacteria 3411
8 Ga0070714_100054970 3300005435 Bacteria 3402
9 Ga0070713_100014966 3300005436 Bacteria 5777
10 Ga0070711_100039002 3300005439 Bacteria 3197
11 Ga0070705_100041243 3300005440 Bacteria 2630
12 Ga0070708_100192103 3300005445 Bacteria 1910
13 Ga0070662_100044468 3300005457 Bacteria 3181
14 Ga0070707_100024386 3300005468 Bacteria 5729
15 Ga0070707_100065871 3300005468 Bacteria 3481
16 Ga0070698_100001069 3300005471 Bacteria 30087
17 Ga0070698_100028153 3300005471 Bacteria 5839
18 Ga0070698_100042232 3300005471 Bacteria 4677
19 Ga0070698_100051286 3300005471 Bacteria 4203
20 Ga0070698_100204841 3300005471 Bacteria 1908
21 Ga0070699_100000243 3300005518 Bacteria 53604
22 Ga0070699_100018716 3300005518 Bacteria 5946
23 Ga0070699_100052648 3300005518 Bacteria 3522
24 Ga0070697_100018927 3300005536 Bacteria 5434
25 Ga0070696_100029669 3300005546 Bacteria 3740
26 Ga0070696_100039603 3300005546 Bacteria 3254
27 Ga0070704_100173372 3300005549 Bacteria 1718
28 Ga0068857_100200697 3300005577 Bacteria 1818
29 Ga0068854_100064257 3300005578 Bacteria 2666
30 Ga0068852_100010548 3300005616 Bacteria 6911
31 Ga0068864_100019551 3300005618 Bacteria 5665
32 Ga0068864_100219044 3300005618 Bacteria 1755
33 Ga0068863_100045026 3300005841 Bacteria 4187
34 Ga0068863_100209088 3300005841 Bacteria 1879
35 Ga0068858_100055997 3300005842 Bacteria 3645
36 Ga0068862_100268886 3300005844 Bacteria 1558
37 Ga0081539_10039655 3300005985 Bacteria 2775
38 Ga0075366_10001327 3300006195 Bacteria 12358
39 Ga0075428_100011995 3300006844 Bacteria 9641
40 Ga0075428_100018604 3300006844 Bacteria 7677
41 Ga0075428_100042902 3300006844 Bacteria 4973
42 Ga0075428_100051445 3300006844 Bacteria 4517
43 Ga0075428_100158692 3300006844 Bacteria 2455
44 Ga0075430_100039375 3300006846 Bacteria 4002
45 Ga0075430_100051526 3300006846 Bacteria 3468
46 Ga0075430_100051943 3300006846 Bacteria 3452
47 Ga0075430_100073504 3300006846 Bacteria 2867
48 Ga0075431_100004570 3300006847 Bacteria 13593
49 Ga0075431_100019541 3300006847 Bacteria 6909
50 Ga0075431_100030582 3300006847 Bacteria 5547
51 Ga0075431_100036389 3300006847 Bacteria 5070
52 Ga0075431_100077030 3300006847 Bacteria 3441
53 Ga0075429_100061297 3300006880 Unclassified 3277
54 Ga0075436_100099166 3300006914 Bacteria 2028
55 Ga0075435_100096633 3300007076 Bacteria 2444
56 Ga0105240_10339011 3300009093 Bacteria 1708
57 Ga0111539_10004733 3300009094 Bacteria 17781
58 Ga0111539_10005250 3300009094 Bacteria 16782
59 Ga0111539_10017133 3300009094 Bacteria 8970
60 Ga0111539_10023606 3300009094 Bacteria 7557
61 Ga0111539_10302040 3300009094 Bacteria 1863
62 Ga0105245_10022412 3300009098 Bacteria 5544
63 Ga0114129_10003256 3300009147 Bacteria 22796
64 Ga0114129_10028702 3300009147 Bacteria 7883
65 Ga0114129_10055300 3300009147 Bacteria 5563
66 Ga0114129_10126037 3300009147 Bacteria 3520
67 Ga0105238_10236511 3300009551 Bacteria 1804
68 Ga0157373_10085425 3300013100 Bacteria 2224
69 Ga0157371_10068495 3300013102 Bacteria 2512
70 Ga0157370_10050404 3300013104 Bacteria 3979
71 Ga0157378_10165342 3300013297 Bacteria 2072
72 Ga0163162_10004461 3300013306 Bacteria 13485
73 Ga0163163_10013688 3300014325 Bacteria 7431
74 Ga0157376_10007801 3300014969 Bacteria 7671
75 Ga0207653_10012049 3300025885 Bacteria 2697
76 Ga0207645_10072098 3300025907 Bacteria 2211
77 Ga0207695_10063798 3300025913 Bacteria 3796
78 Ga0207693_10016306 3300025915 Bacteria 5940
79 Ga0207657_10002884 3300025919 Bacteria 18471
80 Ga0207646_10073257 3300025922 Bacteria 3059
81 Ga0207646_10135735 3300025922 Bacteria 2215
82 Ga0207646_10187837 3300025922 Bacteria 1866
83 Ga0207700_10252824 3300025928 Bacteria 1506
84 Ga0207706_10015592 3300025933 Bacteria 6865
85 Ga0207706_10173929 3300025933 Bacteria 1892
86 Ga0207665_10024745 3300025939 Bacteria 3960
87 Ga0207689_10013591 3300025942 Bacteria 6944
88 Ga0207689_10056143 3300025942 Bacteria 3240
89 Ga0207689_10067541 3300025942 Bacteria 2938
90 Ga0207651_10057700 3300025960 Bacteria 2679
91 Ga0207703_10120123 3300026035 Bacteria 2255
92 Ga0207678_10023032 3300026067 Bacteria 5450
93 Ga0207641_10033882 3300026088 Bacteria 4245
94 Ga0207641_10193828 3300026088 Bacteria 1869
95 Ga0207676_10032977 3300026095 Bacteria 3909
96 Ga0207676_10129188 3300026095 Bacteria 2145
97 Ga0207674_10018709 3300026116 Bacteria 7521
98 Ga0207674_10157240 3300026116 Bacteria 2228
99 Ga0207428_10004238 3300027907 Bacteria 13738
100 Ga0268265_10104956 3300028380 Bacteria 2292
101 Ga0268265_10127358 3300028380 Bacteria 2110
102 Ga0307516_10006730 3300031730 Bacteria 13433
103 Ga0373950_0000009 3300034818 Bacteria 379994
104 Ga0373942_0038375 3300035207 Bacteria 1298
105 Ga0395899_0003083 3300037312 Bacteria 13279
106 Ga0395899_0009308 3300037312 Bacteria 7544
107 Ga0395899_0014825 3300037312 Bacteria 5949
108 Ga0395898_0012688 3300037466 Bacteria 8704
109 Ga0395905_0004849 3300037471 Bacteria 13871
110 Ga0395901_0005473 3300038443 Bacteria 12858
111 Ga0395901_0007210 3300038443 Bacteria 11210
112 Ga0395901_0311007 3300038443 Bacteria 1632
113 Ga0450906_011289 3300042145 Bacteria 1672
114 Ga0450908_013700 3300042184 Bacteria 1464
115 Ga0439435_0003353 3300042436 Bacteria 3323
116 Ga0439464_0004098 3300042439 Bacteria 3709
117 Ga0466960_0023952 3300044901 Bacteria 2748
118 Ga0451576_0184071 3300045051 Bacteria 2181
119 Ga0495580_0006541 3300046472 Bacteria 9476
120 Ga0495648_0052182 3300046524 Bacteria 2485
121 Ga0495636_0001116 3300047318 Bacteria 10111
122 Ga0501031_0039234 3300049568 Bacteria 3090
123 Ga0501036_0144161 3300049572 Bacteria 2009
124 Ga0501038_0172715 3300049574 Bacteria 1748
125 Ga0501039_0020752 3300049575 Bacteria 5035
126 Ga0501040_0059050 3300049576 Bacteria 2635
127 Ga0501042_0028751 3300049578 Bacteria 3920
128 Ga0501043_0047430 3300049579 Bacteria 3378
129 Ga0501067_0000001 3300049583 Bacteria 194431
130 Ga0501071_0032690 3300049587 Bacteria 3695
131 Ga0501075_0013129 3300049591 Bacteria 5906
132 Ga0501075_0026773 3300049591 Bacteria 4247
133 Ga0501076_0008972 3300049592 Bacteria 7359
134 Ga0501077_0110761 3300049593 Bacteria 1740
135 Ga0501079_0119346 3300049741 Bacteria 2050
136 Ga0501081_0007605 3300049743 Bacteria 7025
137 Ga0501081_0069354 3300049743 Bacteria 2456
138 Ga0501083_0137506 3300049744 Bacteria 1600
139 Ga0501035_0125567 3300049822 Bacteria 2240
140 Ga0501045_0028855 3300049824 Bacteria 4005
141 nmdc:mga0k408_271_c1 3300050493 Bacteria 28147
142 nmdc:mga05p37_2190_c1 3300050507 Bacteria 22785
143 nmdc:mga05p37_42971_c1 3300050507 Bacteria 5557
144 nmdc:mga05p37_63549_c1 3300050507 Bacteria 4543
145 nmdc:mga09592_57616_c1 3300050508 Unclassified 3284
146 nmdc:mga0qj67_14039_c1 3300050509 Bacteria 6049
147 nmdc:mga0qj67_177323_c1 3300050509 Unclassified 1731
148 nmdc:mga0qj67_18014_c1 3300050509 Bacteria 5379
149 nmdc:mga0qj67_8923_c1 3300050509 Bacteria 7436
150 nmdc:mga06r32_12989_c1 3300050510 Bacteria 7532
151 nmdc:mga06r32_16118_c1 3300050510 Bacteria 6805
152 nmdc:mga06r32_22228_c1 3300050510 Bacteria 5861
153 nmdc:mga08y16_43176_c1 3300050511 Bacteria 4723
154 nmdc:mga08y16_4387_c1 3300050511 Bacteria 14746
155 nmdc:mga08y16_7475_c1 3300050511 Bacteria 11444
156 nmdc:mga0n895_268003_c1 3300050512 Bacteria 1732
157 nmdc:mga0rr50_85276_c1 3300050513 Bacteria 2447
158 Ga0500555_000056 3300053103 Bacteria 58261
159 Ga0500555_000561 3300053103 Bacteria 14732
160 Ga0500645_000338 3300053730 Bacteria 33356
161 Ga0501084_0143548 3300054114 Bacteria 2011
162 Ga0501082_0013255 3300060353 Bacteria 7089
163 Ga0501082_0077169 3300060353 Bacteria 2872
164 Ga0530510_0028136 3300061734 Bacteria 4030
165 Ga0530510_0073069 3300061734 Bacteria 2489
166 2990713799 2990710928 Bacteria 5002431
167 Ga0075428_100096650
168 JGI24751J29686_10008736
169 Ga0070658_10127683
170 Ga0068869_100085384
171 Ga0070673_100062975
172 Ga0070688_100146963
173 Ga0070709_10026972
174 Ga0070714_100054970
175 Ga0070713_100014966
176 Ga0070711_100039002
177 Ga0070705_100041243
178 Ga0070708_100192103
179 Ga0070662_100044468
180 Ga0070707_100024386
181 Ga0070707_100065871
182 Ga0070698_100001069
183 Ga0070698_100028153
184 Ga0070698_100042232
185 Ga0070698_100051286
186 Ga0070698_100204841
187 Ga0070699_100000243
188 Ga0070699_100018716
189 Ga0070699_100052648
190 Ga0070697_100018927
191 Ga0070696_100029669
192 Ga0070696_100039603
193 Ga0070704_100173372
194 Ga0068857_100200697
195 Ga0068854_100064257
196 Ga0068852_100010548
197 Ga0068864_100019551
198 Ga0068864_100219044
199 Ga0068863_100045026
200 Ga0068863_100209088
201 Ga0068858_100055997
202 Ga0068862_100268886
203 Ga0081539_10039655
204 Ga0075366_10001327
205 Ga0075428_100011995
206 Ga0075428_100018604
207 Ga0075428_100042902
208 Ga0075428_100051445
209 Ga0075428_100158692
210 Ga0075430_100039375
211 Ga0075430_100051526
212 Ga0075430_100051943
213 Ga0075430_100073504
214 Ga0075431_100004570
215 Ga0075431_100019541
216 Ga0075431_100030582
217 Ga0075431_100036389
218 Ga0075431_100077030
219 Ga0075429_100061297
220 Ga0075436_100099166
221 Ga0075435_100096633
222 Ga0105240_10339011
223 Ga0111539_10004733
224 Ga0111539_10005250
225 Ga0111539_10017133
226 Ga0111539_10023606
227 Ga0111539_10302040
228 Ga0105245_10022412
229 Ga0114129_10003256
230 Ga0114129_10028702
231 Ga0114129_10055300
232 Ga0114129_10126037
233 Ga0105238_10236511
234 Ga0157373_10085425
235 Ga0157371_10068495
236 Ga0157370_10050404
237 Ga0157378_10165342
238 Ga0163162_10004461
239 Ga0163163_10013688
240 Ga0157376_10007801
241 Ga0207653_10012049
242 Ga0207645_10072098
243 Ga0207695_10063798
244 Ga0207693_10016306
245 Ga0207657_10002884
246 Ga0207646_10073257
247 Ga0207646_10135735
248 Ga0207646_10187837
249 Ga0207700_10252824
250 Ga0207706_10015592
251 Ga0207706_10173929
252 Ga0207665_10024745
253 Ga0207689_10013591
254 Ga0207689_10056143
255 Ga0207689_10067541
256 Ga0207651_10057700
257 Ga0207703_10120123
258 Ga0207678_10023032
259 Ga0207641_10033882
260 Ga0207641_10193828
261 Ga0207676_10032977
262 Ga0207676_10129188
263 Ga0207674_10018709
264 Ga0207674_10157240
265 Ga0207428_10004238
266 Ga0268265_10104956
267 Ga0268265_10127358
268 Ga0307516_10006730
269 Ga0373950_0000009
270 Ga0373942_0038375
271 Ga0395899_0003083
272 Ga0395899_0009308
273 Ga0395899_0014825
274 Ga0395898_0012688
275 Ga0395905_0004849
276 Ga0395901_0005473
277 Ga0395901_0007210
278 Ga0395901_0311007
279 Ga0450906_011289
280 Ga0450908_013700
281 Ga0439435_0003353
282 Ga0439464_0004098
283 Ga0466960_0023952
284 Ga0451576_0184071
285 Ga0495580_0006541
286 Ga0495648_0052182
287 Ga0495636_0001116
288 Ga0501031_0039234
289 Ga0501036_0144161
290 Ga0501038_0172715
291 Ga0501039_0020752
292 Ga0501040_0059050
293 Ga0501042_0028751
294 Ga0501043_0047430
295 Ga0501067_0000001
296 Ga0501071_0032690
297 Ga0501075_0013129
298 Ga0501075_0026773
299 Ga0501076_0008972
300 Ga0501077_0110761
301 Ga0501079_0119346
302 Ga0501081_0007605
303 Ga0501081_0069354
304 Ga0501083_0137506
305 Ga0501035_0125567
306 Ga0501045_0028855
307 nmdc:mga0k408_271_c1
308 nmdc:mga05p37_2190_c1
309 nmdc:mga05p37_42971_c1
310 nmdc:mga05p37_63549_c1
311 nmdc:mga09592_57616_c1
312 nmdc:mga0qj67_14039_c1
313 nmdc:mga0qj67_177323_c1
314 nmdc:mga0qj67_18014_c1
315 nmdc:mga0qj67_8923_c1
316 nmdc:mga06r32_12989_c1
317 nmdc:mga06r32_16118_c1
318 nmdc:mga06r32_22228_c1
319 nmdc:mga08y16_43176_c1
320 nmdc:mga08y16_4387_c1
321 nmdc:mga08y16_7475_c1
322 nmdc:mga0n895_268003_c1
323 nmdc:mga0rr50_85276_c1
324 Ga0500555_000056
325 Ga0500555_000561
326 Ga0500645_000338
327 Ga0501084_0143548
328 Ga0501082_0013255
329 Ga0501082_0077169
330 Ga0530510_0028136
331 Ga0530510_0073069
332 2990713799

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00083

Sugar_tr

Sugar (and other) transporter

276

404

0.9

PF07690

MFS_1

Major Facilitator Superfamily

272

468

0.89

PF07690

MFS_1

Major Facilitator Superfamily

56

271

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hpk-assembly1.cif.gz_A crystal structure of the bacterial oxalate transporter oxlt in an oxalate-bound occluded form 0.8799 24 416
8jt9-assembly1.cif.gz_A human vmat2 complex with ketanserin 0.8658 26 413
8hpk-assembly1.cif.gz_A crystal structure of the bacterial oxalate transporter oxlt in an oxalate-bound occluded form 0.8587 24 416
6hcl-assembly2.cif.gz_B crystal structure of a mfs transporter with ligand at 2.69 angstroem resolution 0.8573 23 408
8jt9-assembly1.cif.gz_A human vmat2 complex with ketanserin 0.8552 26 413
ID Description Score Start End Superfamily
af_Q4D047_237_423_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9419 254 415 1.20.1250.20
af_A0A0R0HMJ0_13_161_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.93 284 415 1.20.1250.20
af_P0AA78_1_199_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9191 240 408 1.20.1250.20
af_P09836_19_223_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9152 229 414 1.20.1250.20
af_Q8R090_126_283_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9141 60 201 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A521U322-F1-model_v4 MFS transporter 0.9947 12 416 GO:0016020
GO:0022857
AF-A0A4V1UKF9-F1-model_v4 MFS transporter 0.9822 14 307 GO:0016020
GO:0022857
AF-A0A1H4M0Y1-F1-model_v4 Predicted arabinose efflux permease, MFS family 0.9733 11 413 GO:0016020
GO:0022857
AF-A0A7Y2J1B2-F1-model_v4 MFS transporter 0.9704 10 413 GO:0016020
GO:0022857
AF-A0A1H4M0Y1-F1-model_v4 Predicted arabinose efflux permease, MFS family 0.9685 11 413 GO:0016020
GO:0022857

Map