F248086

General Info

Members Datasets Scaffolds Average Seq Length
166 136 132 592

Family's Representative Sequence

Representative Sequence 3300006038|Ga0075365_10074597|Ga0075365_100745972
Length 632
Sequence MLKPRPALVGLAVSAVALSIGLAPTAGSTSPEQPRAGTAGAKTYHQLAKKKDYVKLDLLAINDFHGNLEPPTGSSGNFPGITTVPPVAGTKAGGASFLASLLTKERKKSRAAGATPLTVAAGDLIGASPLLSAAFHDEPTITAMNQMHLDVASVGNHEFDEGVSELLRMQKGGCLADGPAGANGQNSCPGDQTFGGANFKYLGANVAWKSPVGHPRPTVFKPYDIFKVENQKVAFIGMTLEDTDTIVSQAGIAAVDFRDEVETANALVPKLRKKGVKSIIVLLHEGASPADGTSYNSCTGVAGPGLAIAQQLAPQIDAVVSGHTHQAYNCVVKDPKGRPRLLTSASSFGRMLTKLHFLIDPKTRDIVRPAAFAENIINANGEGQKQSLKINKLISVFKTLVEPIANAVIGHLAGGATSVSRSNDADGSKDSVMGNVIADAQKADPTIVRNGQAPVIAFMNPGGIRADLAAPGGVVTYGAAFTVQPFNNFMASMDLTGAQIVAILNEGFNGPNNEGPASGATMNANNKVLQVSGLSYTWDQSDAALANTPAVSNVMVDHDGDPGTLMVPIDPAQTYRVAANNFLADGGDGFTTFKAGTNRLVGGLDIDSLRLYLQANDPYTVPTALTRIAVQP

Samples

Sample ID Description Type Environment
1 2501939600 Micromonospora sp. L5 Isolate Unclassified
2 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
3 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
4 2643221609 Acidovorax sp. Root217 Isolate Unclassified
5 2643221611 Acidovorax sp. Root219 Isolate Unclassified
6 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
7 2643221679 Angustibacter sp. Root456 Isolate Unclassified
8 2643221711 Terrabacter sp. Root85 Isolate Unclassified
9 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
10 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
11 2738543012 Acidovorax sp. CF301 Isolate Unclassified
12 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
13 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
14 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
15 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
16 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
17 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
18 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
19 2816332133 Acidovorax radicis 2721A Isolate Unclassified
20 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
21 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
22 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
23 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
24 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
25 2855683550 Micromonospora sp. RP3T Isolate Unclassified
26 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
27 2858868258 Micromonospora sp. MH33 Isolate Unclassified
28 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
29 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
30 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
31 2902582711 Micromonospora sp. AP08 Isolate Unclassified
32 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
33 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
34 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
35 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
36 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
37 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
38 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
39 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
40 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
41 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
42 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
43 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
44 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
45 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
46 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
47 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
52 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
53 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
54 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
55 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
56 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
57 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
58 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
59 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
60 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
89 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
90 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
91 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
92 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
97 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
98 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
99 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
100 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
101 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
102 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
103 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
104 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
105 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
106 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
107 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
114 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
115 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
116 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
117 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
118 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
119 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
120 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
121 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
122 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
125 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
126 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
127 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
128 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
131 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
132 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
133 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
134 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
135 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
136 649633069 Micromonospora sp. L5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 78.92
Metatranscriptomes 0.6
Isolates 20.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.66
Nodule 0
Rhizoplane 6.02
Rhizosphere 61.45
Stem 0
Stem Tuber 0
Unclassified 16.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10016228 3300001989 Bacteria 2697
2 JGI24744J21845_10005729 3300002077 Bacteria 2573
3 Ga0006562J51391_1114325 3300003578 Bacteria 2206
4 Ga0055540_1002513 3300003792 Bacteria 9592
5 Ga0055531_10001011 3300003794 Bacteria 22322
6 Ga0070675_100036631 3300005354 Bacteria 3993
7 Ga0070659_100060187 3300005366 Bacteria 3000
8 Ga0070700_100001708 3300005441 Bacteria 11028
9 Ga0068867_100012177 3300005459 Bacteria 6077
10 Ga0070679_100053118 3300005530 Bacteria 4034
11 Ga0068853_100013912 3300005539 Bacteria 6579
12 Ga0070672_100018240 3300005543 Bacteria 5068
13 Ga0070696_100010177 3300005546 Bacteria 6295
14 Ga0068854_100029284 3300005578 Bacteria 3811
15 Ga0068852_100007184 3300005616 Bacteria 8117
16 Ga0068870_10018940 3300005840 Bacteria 3333
17 Ga0068860_100000745 3300005843 Bacteria 37086
18 Ga0081538_10035089 3300005981 Bacteria 3302
19 Ga0081539_10003383 3300005985 Bacteria 19743
20 Ga0075365_10002841 3300006038 Bacteria 8686
21 Ga0075365_10013402 3300006038 Bacteria 4901
22 Ga0075365_10024098 3300006038 Bacteria 3834
23 Ga0075365_10043494 3300006038 Bacteria 2941
24 Ga0075365_10074597 3300006038 Bacteria 2288
25 Ga0075363_100004436 3300006048 Bacteria 6140
26 Ga0075364_10003036 3300006051 Bacteria 9483
27 Ga0075364_10031710 3300006051 Bacteria 3395
28 Ga0075367_10002662 3300006178 Bacteria 8231
29 Ga0075370_10000342 3300006353 Bacteria 16835
30 Ga0075430_100096374 3300006846 Bacteria 2472
31 Ga0075431_100018055 3300006847 Bacteria 7175
32 Ga0075429_100019797 3300006880 Bacteria 5834
33 Ga0105245_10012518 3300009098 Bacteria 7383
34 Ga0114129_10002494 3300009147 Bacteria 25545
35 Ga0105243_10003984 3300009148 Bacteria 11771
36 Ga0105248_10036292 3300009177 Bacteria 5513
37 Ga0105238_10046855 3300009551 Bacteria 4359
38 Ga0105249_10130615 3300009553 Bacteria 2398
39 Ga0105239_10103789 3300010375 Bacteria 3147
40 Ga0105246_10068906 3300011119 Bacteria 2482
41 Ga0157378_10004823 3300013297 Bacteria 11816
42 Ga0157372_10068820 3300013307 Bacteria 3980
43 Ga0157380_10018039 3300014326 Bacteria 5234
44 Ga0209673_1011023 3300025273 Bacteria 3761
45 Ga0209051_1000454 3300025303 Bacteria 54312
46 Ga0209257_1000022 3300025304 Bacteria 765258
47 Ga0207643_10026630 3300025908 Bacteria 3201
48 Ga0207659_10035479 3300025926 Bacteria 3447
49 Ga0207687_10036468 3300025927 Bacteria 3350
50 Ga0207690_10064717 3300025932 Bacteria 2498
51 Ga0207709_10031838 3300025935 Bacteria 3084
52 Ga0207691_10025371 3300025940 Bacteria 5566
53 Ga0207711_10179925 3300025941 Bacteria 1922
54 Ga0207661_10120536 3300025944 Bacteria 2232
55 Ga0207661_10137601 3300025944 Bacteria 2099
56 Ga0207640_10074916 3300025981 Bacteria 2292
57 Ga0207639_10026609 3300026041 Bacteria 4203
58 Ga0207708_10000786 3300026075 Bacteria 23943
59 Ga0207648_10001128 3300026089 Bacteria 29997
60 Ga0268264_10000742 3300028381 Bacteria 36992
61 Ga0307515_10052729 3300028794 Bacteria 6024
62 Ga0307405_10051348 3300031731 Bacteria 2558
63 Ga0307413_10070938 3300031824 Bacteria 2193
64 Ga0307410_10025977 3300031852 Bacteria 3680
65 Ga0307407_10042562 3300031903 Bacteria 2547
66 Ga0307407_10060231 3300031903 Bacteria 2215
67 Ga0307409_100065111 3300031995 Bacteria 2866
68 Ga0307409_100065616 3300031995 Bacteria 2858
69 Ga0307409_100067535 3300031995 Bacteria 2824
70 Ga0307415_100058380 3300032126 Bacteria 2656
71 Ga0395898_0010178 3300037466 Bacteria 9845
72 Ga0395898_0085667 3300037466 Bacteria 3037
73 Ga0395901_0021064 3300038443 Bacteria 6678
74 Ga0451843_1670741 3300041509 Bacteria 2703
75 Ga0466972_0047143 3300044658 Bacteria 2084
76 Ga0466965_0007667 3300044683 Bacteria 4967
77 Ga0466963_0061213 3300044694 Bacteria 2516
78 Ga0466957_0024282 3300044842 Bacteria 3586
79 Ga0466958_0045963 3300045836 Bacteria 2634
80 Ga0466967_0019753 3300045976 Bacteria 5426
81 Ga0495640_0085158 3300046533 Bacteria 2095
82 Ga0496100_0027963 3300048903 Bacteria 3474
83 Ga0496104_0008095 3300048907 Bacteria 9325
84 Ga0496105_0011500 3300048908 Bacteria 6995
85 Ga0496105_0028341 3300048908 Bacteria 4579
86 Ga0496110_0049935 3300048913 Bacteria 3672
87 Ga0496110_0054786 3300048913 Bacteria 3508
88 Ga0496110_0124004 3300048913 Bacteria 2330
89 Ga0496114_0001400 3300048917 Bacteria 18335
90 Ga0496114_0054441 3300048917 Bacteria 3336
91 Ga0496114_0099174 3300048917 Bacteria 2484
92 Ga0501033_0038742 3300049570 Bacteria 3561
93 Ga0501041_0001368 3300049577 Bacteria 13457
94 Ga0501041_0007526 3300049577 Bacteria 6393
95 Ga0501041_0026127 3300049577 Bacteria 3511
96 Ga0501048_0086035 3300049582 Bacteria 2217
97 Ga0501070_0027626 3300049586 Bacteria 4760
98 Ga0501070_0090488 3300049586 Bacteria 2533
99 Ga0501071_0006971 3300049587 Bacteria 7377
100 Ga0501072_0044439 3300049588 Bacteria 3493
101 Ga0501072_0053341 3300049588 Bacteria 3184
102 Ga0501074_0030130 3300049590 Bacteria 3933
103 Ga0501074_0047705 3300049590 Bacteria 3095
104 Ga0501075_0017678 3300049591 Bacteria 5150
105 Ga0501075_0045047 3300049591 Bacteria 3310
106 Ga0501076_0021533 3300049592 Bacteria 4945
107 Ga0501077_0040649 3300049593 Bacteria 2962
108 Ga0501077_0084216 3300049593 Bacteria 2015
109 Ga0501079_0012366 3300049741 Bacteria 6513
110 Ga0501080_0036342 3300049742 Bacteria 4599
111 Ga0501080_0041310 3300049742 Bacteria 4298
112 Ga0501035_0029582 3300049822 Bacteria 4996
113 Ga0501045_0006373 3300049824 Bacteria 8169
114 Ga0501045_0041757 3300049824 Bacteria 3338
115 nmdc:mga03n38_25122_c1 3300050490 Bacteria 2443
116 nmdc:mga03n38_31473_c1 3300050490 Bacteria 2239
117 nmdc:mga00v17_26405_c1 3300050491 Bacteria 3384
118 nmdc:mga00v17_7955_c1 3300050491 Bacteria 5683
119 nmdc:mga0yw44_13362_c1 3300050492 Bacteria 4320
120 nmdc:mga0yw44_15063_c1 3300050492 Bacteria 4129
121 nmdc:mga0yw44_31284_c1 3300050492 Bacteria 3093
122 nmdc:mga0yw44_43845_c1 3300050492 Bacteria 2673
123 nmdc:mga0yw44_46165_c1 3300050492 Bacteria 2615
124 nmdc:mga04h51_10394_c1 3300050495 Bacteria 2555
125 nmdc:mga07m45_61370_c1 3300050496 Bacteria 2129
126 nmdc:mga05p37_75606_c1 3300050507 Bacteria 4146
127 nmdc:mga06r32_71429_c1 3300050510 Bacteria 3359
128 nmdc:mga08y16_55123_c1 3300050511 Bacteria 4155
129 Ga0501084_0044545 3300054114 Bacteria 3714
130 Ga0501082_0003368 3300060353 Bacteria 13950
131 Ga0466962_0007295 3300061719 Bacteria 5302
132 Ga0530510_0054869 3300061734 Bacteria 2879

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300041509 Ga0451843_1670741 Ga0451843_1670741_809_2329 485
2 3300061734 Ga0530510_0054869 Ga0530510_0054869_42_1589 489
3 3300005985 Ga0081539_10003383 Ga0081539_100033833 518
4 3300005981 Ga0081538_10035089 Ga0081538_100350894 523
5 3300049577 Ga0501041_0026127 Ga0501041_0026127_1042_2781 523
6 3300049590 Ga0501074_0047705 Ga0501074_0047705_176_1915 523
7 3300049591 Ga0501075_0017678 Ga0501075_0017678_1758_3497 523
8 iso_pu_bacteria 2858868258 2858872147 523
9 iso_pu_bacteria 2902582711 2902585784 523
10 iso_pu_bacteria 2996221748 2996228084 523
11 iso_pu_bacteria 2501939600 2501941907 524
12 iso_pu_bacteria 2622736626 2623585508 524
13 iso_pu_bacteria 2855683550 2855686304 524
14 iso_pu_bacteria 2856858025 2856859409 524
15 iso_pu_bacteria 649633069 649812726 524
16 3300031995 Ga0307409_100067535 Ga0307409_1000675352 525
17 3300032126 Ga0307415_100058380 Ga0307415_1000583802 525
18 3300049570 Ga0501033_0038742 Ga0501033_0038742_309_2048 525
19 3300049577 Ga0501041_0001368 Ga0501041_0001368_2572_4311 525
20 3300049586 Ga0501070_0027626 Ga0501070_0027626_1831_3570 525
21 3300049588 Ga0501072_0044439 Ga0501072_0044439_561_2300 525
22 3300049592 Ga0501076_0021533 Ga0501076_0021533_699_2438 525
23 3300049742 Ga0501080_0041310 Ga0501080_0041310_1168_2907 525
24 3300049822 Ga0501035_0029582 Ga0501035_0029582_389_2128 525
25 3300049824 Ga0501045_0006373 Ga0501045_0006373_4943_6682 525
26 3300009177 Ga0105248_10036292 Ga0105248_100362921 526
27 3300044694 Ga0466963_0061213 Ga0466963_0061213_786_2498 526
28 3300009148 Ga0105243_10003984 Ga0105243_100039848 527
29 3300009551 Ga0105238_10046855 Ga0105238_100468555 527
30 3300014326 Ga0157380_10018039 Ga0157380_100180396 527
31 3300031824 Ga0307413_10070938 Ga0307413_100709382 527
32 iso_pu_bacteria 2728369276 2729907282 527
33 iso_pu_bacteria 2895427314 2895437494 527
34 3300031903 Ga0307407_10060231 Ga0307407_100602311 528
35 3300049590 Ga0501074_0030130 Ga0501074_0030130_1895_3625 528
36 3300049593 Ga0501077_0084216 Ga0501077_0084216_273_2003 528
37 3300049741 Ga0501079_0012366 Ga0501079_0012366_3210_4940 528
38 3300060353 Ga0501082_0003368 Ga0501082_0003368_2914_4656 528
39 3300049591 Ga0501075_0045047 Ga0501075_0045047_1165_2907 529
40 3300049593 Ga0501077_0040649 Ga0501077_0040649_962_2704 529
41 3300054114 Ga0501084_0044545 Ga0501084_0044545_1292_3034 529
42 3300049577 Ga0501041_0007526 Ga0501041_0007526_4254_6107 532
43 3300049582 Ga0501048_0086035 Ga0501048_0086035_194_2047 532
44 3300049586 Ga0501070_0090488 Ga0501070_0090488_387_2240 532
45 3300049587 Ga0501071_0006971 Ga0501071_0006971_299_2152 532
46 3300049742 Ga0501080_0036342 Ga0501080_0036342_645_2498 532
47 3300003578 Ga0006562J51391_1114325 Ga0006562J51391_11143252 533
48 3300009098 Ga0105245_10012518 Ga0105245_100125188 534
49 3300048903 Ga0496100_0027963 Ga0496100_0027963_25_1884 535
50 3300025927 Ga0207687_10036468 Ga0207687_100364683 536
51 3300048908 Ga0496105_0028341 Ga0496105_0028341_2664_4505 536
52 3300048917 Ga0496114_0001400 Ga0496114_0001400_76_1917 536
53 iso_pu_bacteria 2643221711 2644607770 536
54 3300025944 Ga0207661_10137601 Ga0207661_101376011 537
55 3300048917 Ga0496114_0054441 Ga0496114_0054441_471_2294 537
56 iso_pu_bacteria 2643221609 2644063134 537
57 iso_pu_bacteria 2643221611 2644075494 537
58 iso_pu_bacteria 2738543012 2739246713 537
59 iso_pu_bacteria 2816332133 2816475505 537
60 3300013297 Ga0157378_10004823 Ga0157378_100048239 538
61 3300048913 Ga0496110_0124004 Ga0496110_0124004_368_2164 538
62 3300050491 nmdc:mga00v17_26405_c1 nmdc:mga00v17_26405_c1_1135_2976 538
63 3300050492 nmdc:mga0yw44_15063_c1 nmdc:mga0yw44_15063_c1_1865_3742 538
64 3300050496 nmdc:mga07m45_61370_c1 nmdc:mga07m45_61370_c1_194_2071 538
65 iso_pu_bacteria 2811994882 2812373229 538
66 iso_pu_bacteria 2818991318 2819426028 538
67 iso_pu_bacteria 2818991458 2819665087 538
68 iso_pu_bacteria 2818991462 2819692802 538
69 iso_pu_bacteria 2818991469 2819727201 538
70 3300003792 Ga0055540_1002513 Ga0055540_10025132 539
71 3300003794 Ga0055531_10001011 Ga0055531_1000101120 539
72 3300009553 Ga0105249_10130615 Ga0105249_101306151 539
73 3300025273 Ga0209673_1011023 Ga0209673_10110233 539
74 3300025303 Ga0209051_1000454 Ga0209051_100045446 539
75 3300025304 Ga0209257_1000022 Ga0209257_1000022721 539
76 iso_pu_bacteria 2861520306 2861520728 539
77 3300028794 Ga0307515_10052729 Ga0307515_100527294 540
78 3300048907 Ga0496104_0008095 Ga0496104_0008095_2059_3870 540
79 3300048908 Ga0496105_0011500 Ga0496105_0011500_273_2084 540
80 3300048917 Ga0496114_0099174 Ga0496114_0099174_37_1848 540
81 iso_pu_bacteria 2643221567 2643852288 540
82 3300037466 Ga0395898_0085667 Ga0395898_0085667_1037_2827 541
83 3300038443 Ga0395901_0021064 Ga0395901_0021064_236_2026 541
84 iso_pu_bacteria 2643221624 2644136810 541
85 iso_pu_bacteria 2773857762 2774396176 542
86 iso_pu_bacteria 2808606439 2809197813 542
87 iso_pu_bacteria 2811994878 2812347696 542
88 iso_pu_bacteria 2891968417 2891968894 542
89 iso_pu_bacteria 2919446982 2919448272 542
90 3300048913 Ga0496110_0049935 Ga0496110_0049935_45_1910 543
91 iso_pu_bacteria 2808606365 2808871897 543
92 3300025935 Ga0207709_10031838 Ga0207709_100318383 544
93 3300050492 nmdc:mga0yw44_43845_c1 nmdc:mga0yw44_43845_c1_656_2545 545
94 3300002077 JGI24744J21845_10005729 JGI24744J21845_100057291 546
95 3300005354 Ga0070675_100036631 Ga0070675_1000366312 546
96 3300005366 Ga0070659_100060187 Ga0070659_1000601872 546
97 3300005441 Ga0070700_100001708 Ga0070700_10000170810 546
98 3300005459 Ga0068867_100012177 Ga0068867_1000121775 546
99 3300005539 Ga0068853_100013912 Ga0068853_1000139126 546
100 3300005543 Ga0070672_100018240 Ga0070672_1000182404 546
101 3300005578 Ga0068854_100029284 Ga0068854_1000292841 546
102 3300005616 Ga0068852_100007184 Ga0068852_1000071846 546
103 3300005840 Ga0068870_10018940 Ga0068870_100189403 546
104 3300006038 Ga0075365_10002841 Ga0075365_100028414 546
105 3300006038 Ga0075365_10013402 Ga0075365_100134022 546
106 3300006038 Ga0075365_10024098 Ga0075365_100240982 546
107 3300006048 Ga0075363_100004436 Ga0075363_1000044365 546
108 3300006051 Ga0075364_10003036 Ga0075364_1000303610 546
109 3300006353 Ga0075370_10000342 Ga0075370_1000034210 546
110 3300006846 Ga0075430_100096374 Ga0075430_1000963742 546
111 3300006880 Ga0075429_100019797 Ga0075429_1000197971 546
112 3300010375 Ga0105239_10103789 Ga0105239_101037894 546
113 3300011119 Ga0105246_10068906 Ga0105246_100689062 546
114 3300013307 Ga0157372_10068820 Ga0157372_100688204 546
115 3300025908 Ga0207643_10026630 Ga0207643_100266302 546
116 3300025926 Ga0207659_10035479 Ga0207659_100354792 546
117 3300025932 Ga0207690_10064717 Ga0207690_100647171 546
118 3300025940 Ga0207691_10025371 Ga0207691_100253715 546
119 3300025941 Ga0207711_10179925 Ga0207711_101799251 546
120 3300025944 Ga0207661_10120536 Ga0207661_101205361 546
121 3300025981 Ga0207640_10074916 Ga0207640_100749161 546
122 3300026041 Ga0207639_10026609 Ga0207639_100266091 546
123 3300026075 Ga0207708_10000786 Ga0207708_100007865 546
124 3300026089 Ga0207648_10001128 Ga0207648_100011288 546
125 3300031731 Ga0307405_10051348 Ga0307405_100513482 546
126 3300031852 Ga0307410_10025977 Ga0307410_100259774 546
127 3300031903 Ga0307407_10042562 Ga0307407_100425621 546
128 3300031995 Ga0307409_100065111 Ga0307409_1000651112 546
129 3300037466 Ga0395898_0010178 Ga0395898_0010178_4190_6037 546
130 3300044683 Ga0466965_0007667 Ga0466965_0007667_924_2780 546
131 3300044842 Ga0466957_0024282 Ga0466957_0024282_886_2742 546
132 3300045836 Ga0466958_0045963 Ga0466958_0045963_766_2622 546
133 3300048913 Ga0496110_0054786 Ga0496110_0054786_137_1984 546
134 3300050490 nmdc:mga03n38_31473_c1 nmdc:mga03n38_31473_c1_166_2007 546
135 3300050492 nmdc:mga0yw44_13362_c1 nmdc:mga0yw44_13362_c1_341_2182 546
136 3300050492 nmdc:mga0yw44_46165_c1 nmdc:mga0yw44_46165_c1_63_1934 546
137 3300050511 nmdc:mga08y16_55123_c1 nmdc:mga08y16_55123_c1_1453_3306 546
138 3300061719 Ga0466962_0007295 Ga0466962_0007295_2794_4650 546
139 iso_pu_bacteria 2799112218 2799182816 546
140 3300006847 Ga0075431_100018055 Ga0075431_1000180554 548
141 3300009147 Ga0114129_10002494 Ga0114129_100024943 548
142 3300044658 Ga0466972_0047143 Ga0466972_0047143_34_1890 548
143 3300049588 Ga0501072_0053341 Ga0501072_0053341_995_2884 548
144 3300050507 nmdc:mga05p37_75606_c1 nmdc:mga05p37_75606_c1_94_1878 548
145 3300050510 nmdc:mga06r32_71429_c1 nmdc:mga06r32_71429_c1_1142_2926 548
146 iso_pu_bacteria 2855386786 2855387331 548
147 3300005546 Ga0070696_100010177 Ga0070696_1000101774 549
148 3300046533 Ga0495640_0085158 Ga0495640_0085158_142_2019 549
149 iso_pu_bacteria 2643221679 2644446934 549
150 iso_pu_bacteria 2731639228 2731905928 549
151 3300005843 Ga0068860_100000745 Ga0068860_10000074516 550
152 3300006051 Ga0075364_10031710 Ga0075364_100317102 550
153 3300028381 Ga0268264_10000742 Ga0268264_1000074224 550
154 3300031995 Ga0307409_100065616 Ga0307409_1000656162 550
155 3300050491 nmdc:mga00v17_7955_c1 nmdc:mga00v17_7955_c1_218_2095 550
156 3300006038 Ga0075365_10043494 Ga0075365_100434942 551
157 3300006178 Ga0075367_10002662 Ga0075367_100026628 551
158 3300049824 Ga0501045_0041757 Ga0501045_0041757_1115_2962 551
159 3300050492 nmdc:mga0yw44_31284_c1 nmdc:mga0yw44_31284_c1_258_2129 551
160 3300006038 Ga0075365_10074597 Ga0075365_100745972 552
161 3300045976 Ga0466967_0019753 Ga0466967_0019753_458_2332 552
162 3300050490 nmdc:mga03n38_25122_c1 nmdc:mga03n38_25122_c1_65_1936 552
163 3300050495 nmdc:mga04h51_10394_c1 nmdc:mga04h51_10394_c1_569_2440 552
164 3300005530 Ga0070679_100053118 Ga0070679_1000531183 554
165 iso_pu_bacteria 2816332119 2816423243 562
166 3300001989 JGI24739J22299_10016228 JGI24739J22299_100162282 569

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02872

5_nucleotid_C

5'-nucleotidase, C-terminal domain

408

595

0.9

PF00149

Metallophos

Calcineurin-like phosphoesterase

56

327

0.66

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ivd-assembly2.cif.gz_B putative 5'-nucleotidase (c4898) from escherichia coli in complex with uridine 0.8407 23 566
3ive-assembly1.cif.gz_A putative 5'-nucleotidase (c4898) from escherichia coli in complex with cytidine 0.838 23 568
3ive-assembly1.cif.gz_A putative 5'-nucleotidase (c4898) from escherichia coli in complex with cytidine 0.8364 23 568
3ivd-assembly2.cif.gz_B putative 5'-nucleotidase (c4898) from escherichia coli in complex with uridine 0.8344 23 566
2z1a-assembly1.cif.gz_A crystal structure of 5'-nucleotidase precursor from thermus thermophilus hb8 0.8071 25 566
ID Description Score Start End Superfamily
af_A0A0P0X3E8_17_159_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9489 57 82 3.40.50.300
4h1sB02 Alpha Beta;Alpha-Beta Complex;5'-nucleotidase;;5'-Nucleotidase, C-terminal domain 0.8876 366 567 3.90.780.10
af_Q9D3Z8_34_311_3.60.21.10 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.8788 21 358 3.60.21.10
af_Q9D3Z8_34_311_3.60.21.10 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.8608 21 358 3.60.21.10
4uwqJ01 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.856 28 360 3.60.21.10
ID Description Score Start End GO Terms
AF-A0A329WFG7-F1-model_v4 5'-Nucleotidase C-terminal domain-containing protein 0.9598 434 566 GO:0008253
GO:0008768
GO:0009166
GO:0030288
AF-A0A081RZJ0-F1-model_v4 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase (EC 3.1.3.5) 0.959 61 566 GO:0000166
GO:0008768
GO:0009166
GO:0030288
GO:0106411
AF-A0A101GT04-F1-model_v4 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase 0.9584 24 566 GO:0008253
GO:0008768
GO:0009166
GO:0030288
AF-A0A2N1D3P7-F1-model_v4 Bifunctional metallophosphatase/5'-nucleotidase 0.9459 23 568 GO:0000166
GO:0008253
GO:0008768
GO:0009166
GO:0030288
AF-A0A081RZJ0-F1-model_v4 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase (EC 3.1.3.5) 0.9454 61 566 GO:0000166
GO:0008768
GO:0009166
GO:0030288
GO:0106411

Feature Viewer

pLDDT pTM Quality
91.85 0.89 High
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Predicted Structure (AlphaFold2)

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