F247302

General Info

Members Datasets Scaffolds Average Seq Length
165 117 330 328

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2857740372|2857743325
Length 351
Sequence VLGGTAFLSAEIARQAVEAGHDVTCLARGSSTNPPDGVTWVRSDRAAGATAFAEINGRWDEVVDVSRDPVQARVALAVLGPFTAHWTFVSSCSVYADHSIPDAGENAALLEPLPEGQSGTPETYGESKSAIEQMTVAAVGEKAHIVRAGLIGGPGDGTDRYGYWPARFAANTDTVLVPDIPDDATQIIDVRDLAAWILQSAEEGLTGIYNALGEVVRFEDYIAESQRAVGTPAGDGISARDRNSAKDRISAKDRAAQDVIRPDEAWLVEHGVEYWSGPDSLPLWLPAGHDGFQARSNRAARERGMVLRPWQETLVATLEDERARGLDRDRKAGLSRETEQRLVALWQLEQR

Samples

Sample ID Description Type Environment
1 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
8 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
9 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
10 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
11 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
12 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
13 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
14 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
15 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
16 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
17 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
18 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
26 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
27 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
28 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
29 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
30 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
31 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
32 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
33 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
34 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
35 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
36 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
37 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
38 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
39 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
40 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
41 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
42 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
43 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
44 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
45 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
46 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
47 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
48 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
49 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
50 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
51 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
52 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
53 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
54 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
55 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
56 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
57 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
58 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
59 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
60 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
61 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
62 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
63 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
64 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
65 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
66 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
67 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
68 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
69 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
70 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
71 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
72 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
73 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
74 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
75 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
76 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
77 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
78 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
79 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
80 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
81 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
82 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
83 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
89 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
90 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
91 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
92 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
93 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
94 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
95 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
96 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
97 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
98 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
99 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
100 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
101 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
102 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
103 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
104 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
105 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
106 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
107 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
108 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
109 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
110 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
111 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
112 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
113 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
114 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
115 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
116 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
117 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.42
Metatranscriptomes 0
Isolates 17.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.64
Nodule 0
Rhizoplane 10.3
Rhizosphere 79.39
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000287 3300002773 Bacteria 33449
2 JGI25151J46595_10023014 3300003187 Bacteria 2576
3 rootL2_10197918 3300003322 Bacteria 2126
4 Ga0070666_10082501 3300005335 Bacteria 2199
5 Ga0070671_100171580 3300005355 Bacteria 1835
6 Ga0070673_100375367 3300005364 Bacteria 1267
7 Ga0075432_10009510 3300006058 Bacteria 3311
8 Ga0105244_10001898 3300009036 Bacteria 16243
9 Ga0105243_10059686 3300009148 Bacteria 3045
10 Ga0105243_10138271 3300009148 Bacteria 2075
11 Ga0105248_10187242 3300009177 Bacteria 2332
12 Ga0105246_10001188 3300011119 Bacteria 15160
13 Ga0157369_10118408 3300013105 Bacteria 2811
14 Ga0157375_10088455 3300013308 Bacteria 3152
15 Ga0209148_1002181 3300025254 Bacteria 7239
16 Ga0209129_1000129 3300025258 Bacteria 129853
17 Ga0209025_1000279 3300025294 Bacteria 116352
18 Ga0209051_1002347 3300025303 Bacteria 13695
19 Ga0207655_1013244 3300025728 Bacteria 4748
20 Ga0207655_1017241 3300025728 Bacteria 3903
21 Ga0207680_10024890 3300025903 Bacteria 3293
22 Ga0207645_10011369 3300025907 Bacteria 6082
23 Ga0207650_10378168 3300025925 Bacteria 1169
24 Ga0207691_10000576 3300025940 Bacteria 36700
25 Ga0207711_10441150 3300025941 Bacteria 1211
26 Ga0207651_10210161 3300025960 Bacteria 1566
27 Ga0207428_10139648 3300027907 Bacteria 1850
28 Ga0307408_100004238 3300031548 Bacteria 9759
29 Ga0307408_100020862 3300031548 Bacteria 4426
30 Ga0307408_100026238 3300031548 Bacteria 3999
31 Ga0307408_100054425 3300031548 Bacteria 2893
32 Ga0307408_100198748 3300031548 Bacteria 1621
33 Ga0307405_10005033 3300031731 Bacteria 6324
34 Ga0307405_10034272 3300031731 Bacteria 3019
35 Ga0307413_10017541 3300031824 Bacteria 3731
36 Ga0307413_10027096 3300031824 Bacteria 3169
37 Ga0307413_10112566 3300031824 Bacteria 1825
38 Ga0307413_10121580 3300031824 Bacteria 1770
39 Ga0307413_10212241 3300031824 Bacteria 1407
40 Ga0307413_10296531 3300031824 Bacteria 1224
41 Ga0307410_10001378 3300031852 Bacteria 10933
42 Ga0307410_10005324 3300031852 Bacteria 6794
43 Ga0307410_10031369 3300031852 Bacteria 3410
44 Ga0307410_10053035 3300031852 Bacteria 2742
45 Ga0307410_10067806 3300031852 Bacteria 2462
46 Ga0307410_10094013 3300031852 Bacteria 2134
47 Ga0307406_10042287 3300031901 Bacteria 2844
48 Ga0307406_10065484 3300031901 Bacteria 2362
49 Ga0307406_10073535 3300031901 Bacteria 2248
50 Ga0307407_10021567 3300031903 Bacteria 3325
51 Ga0307407_10056592 3300031903 Bacteria 2271
52 Ga0307407_10083481 3300031903 Bacteria 1938
53 Ga0307412_10013455 3300031911 Bacteria 4800
54 Ga0307412_10024715 3300031911 Bacteria 3711
55 Ga0307412_10027335 3300031911 Bacteria 3556
56 Ga0307412_10035631 3300031911 Bacteria 3181
57 Ga0307412_10054115 3300031911 Bacteria 2663
58 Ga0307409_100012575 3300031995 Bacteria 5400
59 Ga0307409_100034341 3300031995 Bacteria 3703
60 Ga0307409_100044709 3300031995 Bacteria 3338
61 Ga0307409_100622446 3300031995 Bacteria 1069
62 Ga0307416_100006971 3300032002 Bacteria 7125
63 Ga0307416_100161352 3300032002 Bacteria 2072
64 Ga0307416_100220947 3300032002 Bacteria 1817
65 Ga0307416_100495061 3300032002 Bacteria 1285
66 Ga0307416_100562978 3300032002 Bacteria 1215
67 Ga0307414_10001424 3300032004 Bacteria 12417
68 Ga0307414_10260077 3300032004 Bacteria 1448
69 Ga0307415_100092928 3300032126 Bacteria 2189
70 Ga0395898_0071103 3300037466 Bacteria 3363
71 Ga0395898_0124972 3300037466 Bacteria 2464
72 Ga0395901_0127342 3300038443 Bacteria 2676
73 Ga0439438_028536 3300041405 Bacteria 1501
74 Ga0439461_0015288 3300041410 Bacteria 1469
75 Ga0439466_0001654 3300041411 Bacteria 8708
76 Ga0439466_0076560 3300041411 Bacteria 1059
77 Ga0439433_0000265 3300041999 Bacteria 8848
78 Ga0439433_0015304 3300041999 Bacteria 1693
79 Ga0439442_000489 3300042002 Bacteria 8982
80 Ga0439442_000645 3300042002 Bacteria 7414
81 Ga0439442_008250 3300042002 Bacteria 2102
82 Ga0439432_048253 3300042006 Bacteria 1334
83 Ga0439449_0004530 3300042007 Bacteria 5368
84 Ga0439449_0091762 3300042007 Bacteria 1121
85 Ga0439457_001587 3300042014 Bacteria 6782
86 Ga0439462_0011856 3300042015 Bacteria 2223
87 Ga0450920_010291 3300042122 Bacteria 1733
88 Ga0450907_000098 3300042146 Bacteria 33569
89 Ga0450907_021582 3300042146 Bacteria 1083
90 Ga0439434_0000611 3300042435 Bacteria 10280
91 Ga0450918_000446 3300042531 Bacteria 8797
92 Ga0495580_0018173 3300046472 Bacteria 5239
93 Ga0495664_0192595 3300046477 Bacteria 1236
94 Ga0495594_0059325 3300046499 Bacteria 2116
95 Ga0495630_0055801 3300046517 Bacteria 2960
96 Ga0495643_0043105 3300046522 Bacteria 2457
97 Ga0495642_0061147 3300046528 Bacteria 1563
98 Ga0495665_0097843 3300046531 Bacteria 1540
99 Ga0495586_0096109 3300046535 Bacteria 1640
100 Ga0495586_0186119 3300046535 Bacteria 1175
101 Ga0495587_0004889 3300046536 Bacteria 8786
102 Ga0495645_0064111 3300046543 Bacteria 2659
103 Ga0495656_0040183 3300046615 Bacteria 1948
104 Ga0495588_0011157 3300046674 Bacteria 4208
105 Ga0495600_0139456 3300046809 Bacteria 1574
106 Ga0495581_0009035 3300047315 Bacteria 5766
107 Ga0495581_0027507 3300047315 Bacteria 3297
108 Ga0495680_0039912 3300047322 Bacteria 3741
109 Ga0495677_0067907 3300047445 Bacteria 1327
110 Ga0495681_0069126 3300047470 Bacteria 1605
111 Ga0495684_0171620 3300047471 Bacteria 1613
112 Ga0496100_0202465 3300048903 Bacteria 1447
113 Ga0496101_0195711 3300048904 Bacteria 1561
114 Ga0496102_0054892 3300048905 Bacteria 3633
115 Ga0496103_0202210 3300048906 Bacteria 1277
116 Ga0496104_0150479 3300048907 Bacteria 2234
117 Ga0496106_0017773 3300048909 Bacteria 5259
118 Ga0496106_0067547 3300048909 Bacteria 2725
119 Ga0496107_0015098 3300048910 Bacteria 5411
120 Ga0496108_0393409 3300048911 Bacteria 1210
121 Ga0496109_0043973 3300048912 Bacteria 4050
122 Ga0496109_0244709 3300048912 Bacteria 1688
123 Ga0496110_0124759 3300048913 Bacteria 2322
124 Ga0496110_0169823 3300048913 Bacteria 1978
125 Ga0496111_0055559 3300048914 Bacteria 2863
126 Ga0496111_0059213 3300048914 Bacteria 2774
127 Ga0496113_0170279 3300048916 Bacteria 1724
128 Ga0496115_0098549 3300048918 Bacteria 2394
129 Ga0501032_0001201 3300049569 Bacteria 20712
130 Ga0501032_0002817 3300049569 Bacteria 13524
131 Ga0501034_0000231 3300049571 Bacteria 104378
132 Ga0501038_0042509 3300049574 Bacteria 3957
133 Ga0501039_0154832 3300049575 Bacteria 1800
134 Ga0501043_0011789 3300049579 Bacteria 6847
135 Ga0501043_0280715 3300049579 Bacteria 1276
136 Ga0501070_0051918 3300049586 Bacteria 3403
137 2857743325 2857740372 Bacteria 4782044
138 2691514293 2690315906 Bacteria 4517044
139 2775656597 2775506735 Bacteria 4556596
140 2808831534 2808606357 Bacteria 4466944
141 2808852741 2808606360 Bacteria 4404006
142 2808891609 2808606370 Bacteria 4942454
143 2812320852 2811994871 Bacteria 4497550
144 2883824111 2883821847 Bacteria 5121194
145 2904497972 2904497146 Bacteria 4731781
146 2904777326 2904776348 Bacteria 4658726
147 2910812169 2910809715 Bacteria 4982797
148 2919034682 2919034639 Bacteria 4763403
149 2919062341 2919059106 Bacteria 4991624
150 2919540166 2919538618 Bacteria 4677069
151 2932427997 2932426870 Bacteria 4547726
152 2933421897 2933418574 Bacteria 4476724
153 2939598342 2939598168 Bacteria 4687164
154 2939648414 2939647034 Bacteria 4681660
155 2939675538 2939674588 Bacteria 4844420
156 2945918603 2945916053 Bacteria 4555517
157 2945921117 2945920336 Bacteria 4501603
158 2945942762 2945941187 Bacteria 4682474
159 2945959422 2945956166 Bacteria 5110334
160 2946026064 2946024296 Bacteria 3508095
161 2946038641 2946037020 Bacteria 4900426
162 2946062465 2946059875 Bacteria 4386623
163 2953999930 2953998280 Bacteria 4812144
164 2974306625 2974302888 Bacteria 4369871
165 8054107985 8054107350 Bacteria 5022511
166 JGI25152J39213_1000287
167 JGI25151J46595_10023014
168 rootL2_10197918
169 Ga0070666_10082501
170 Ga0070671_100171580
171 Ga0070673_100375367
172 Ga0075432_10009510
173 Ga0105244_10001898
174 Ga0105243_10059686
175 Ga0105243_10138271
176 Ga0105248_10187242
177 Ga0105246_10001188
178 Ga0157369_10118408
179 Ga0157375_10088455
180 Ga0209148_1002181
181 Ga0209129_1000129
182 Ga0209025_1000279
183 Ga0209051_1002347
184 Ga0207655_1013244
185 Ga0207655_1017241
186 Ga0207680_10024890
187 Ga0207645_10011369
188 Ga0207650_10378168
189 Ga0207691_10000576
190 Ga0207711_10441150
191 Ga0207651_10210161
192 Ga0207428_10139648
193 Ga0307408_100004238
194 Ga0307408_100020862
195 Ga0307408_100026238
196 Ga0307408_100054425
197 Ga0307408_100198748
198 Ga0307405_10005033
199 Ga0307405_10034272
200 Ga0307413_10017541
201 Ga0307413_10027096
202 Ga0307413_10112566
203 Ga0307413_10121580
204 Ga0307413_10212241
205 Ga0307413_10296531
206 Ga0307410_10001378
207 Ga0307410_10005324
208 Ga0307410_10031369
209 Ga0307410_10053035
210 Ga0307410_10067806
211 Ga0307410_10094013
212 Ga0307406_10042287
213 Ga0307406_10065484
214 Ga0307406_10073535
215 Ga0307407_10021567
216 Ga0307407_10056592
217 Ga0307407_10083481
218 Ga0307412_10013455
219 Ga0307412_10024715
220 Ga0307412_10027335
221 Ga0307412_10035631
222 Ga0307412_10054115
223 Ga0307409_100012575
224 Ga0307409_100034341
225 Ga0307409_100044709
226 Ga0307409_100622446
227 Ga0307416_100006971
228 Ga0307416_100161352
229 Ga0307416_100220947
230 Ga0307416_100495061
231 Ga0307416_100562978
232 Ga0307414_10001424
233 Ga0307414_10260077
234 Ga0307415_100092928
235 Ga0395898_0071103
236 Ga0395898_0124972
237 Ga0395901_0127342
238 Ga0439438_028536
239 Ga0439461_0015288
240 Ga0439466_0001654
241 Ga0439466_0076560
242 Ga0439433_0000265
243 Ga0439433_0015304
244 Ga0439442_000489
245 Ga0439442_000645
246 Ga0439442_008250
247 Ga0439432_048253
248 Ga0439449_0004530
249 Ga0439449_0091762
250 Ga0439457_001587
251 Ga0439462_0011856
252 Ga0450920_010291
253 Ga0450907_000098
254 Ga0450907_021582
255 Ga0439434_0000611
256 Ga0450918_000446
257 Ga0495580_0018173
258 Ga0495664_0192595
259 Ga0495594_0059325
260 Ga0495630_0055801
261 Ga0495643_0043105
262 Ga0495642_0061147
263 Ga0495665_0097843
264 Ga0495586_0096109
265 Ga0495586_0186119
266 Ga0495587_0004889
267 Ga0495645_0064111
268 Ga0495656_0040183
269 Ga0495588_0011157
270 Ga0495600_0139456
271 Ga0495581_0009035
272 Ga0495581_0027507
273 Ga0495680_0039912
274 Ga0495677_0067907
275 Ga0495681_0069126
276 Ga0495684_0171620
277 Ga0496100_0202465
278 Ga0496101_0195711
279 Ga0496102_0054892
280 Ga0496103_0202210
281 Ga0496104_0150479
282 Ga0496106_0017773
283 Ga0496106_0067547
284 Ga0496107_0015098
285 Ga0496108_0393409
286 Ga0496109_0043973
287 Ga0496109_0244709
288 Ga0496110_0124759
289 Ga0496110_0169823
290 Ga0496111_0055559
291 Ga0496111_0059213
292 Ga0496113_0170279
293 Ga0496115_0098549
294 Ga0501032_0001201
295 Ga0501032_0002817
296 Ga0501034_0000231
297 Ga0501038_0042509
298 Ga0501039_0154832
299 Ga0501043_0011789
300 Ga0501043_0280715
301 Ga0501070_0051918
302 2857743325
303 2691514293
304 2775656597
305 2808831534
306 2808852741
307 2808891609
308 2812320852
309 2883824111
310 2904497972
311 2904777326
312 2910812169
313 2919034682
314 2919062341
315 2919540166
316 2932427997
317 2933421897
318 2939598342
319 2939648414
320 2939675538
321 2945918603
322 2945921117
323 2945942762
324 2945959422
325 2946026064
326 2946038641
327 2946062465
328 2953999930
329 2974306625
330 8054107985

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

1

211

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j34-assembly1.cif.gz_A crystal structure of kynurenine 3-monooxygenase - truncated at position 394 plus his tag cleaved. 0.9155 2 30
3ka7-assembly1.cif.gz_A crystal structure of an oxidoreductase from methanosarcina mazei. northeast structural genomics consortium target id mar208 0.8996 1 32
3int-assembly3.cif.gz_B structure of udp-galactopyranose mutase bound to udp-galactose (reduced) 0.8813 2 30
1u7w-assembly2.cif.gz_C-2 phosphopantothenoylcysteine synthetase from e. coli, ctp-complex 0.7786 1 94
4lw8-assembly1.cif.gz_B crystal structure of a putative epimerase from burkholderia cenocepacia j2315 0.7674 2 303
ID Description Score Start End Superfamily
3zdnC01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9173 2 30 3.50.50.60
af_P76113_12_234_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8574 2 34 3.40.50.2300
4j36B00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8479 2 30 3.50.50.60
6b4oA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8464 2 30 3.50.50.60
af_C0H4M9_5_398_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8458 2 34 3.50.50.60
ID Description Score Start End GO Terms
AF-A9WUY0-F1-model_v4 NAD dependent epimerase/dehydratase 0.9792 149 326
AF-A0A2R7RC12-F1-model_v4 Epimerase 0.9683 164 326
AF-A0A4Q8URL9-F1-model_v4 Epimerase 0.9653 1 329 GO:0004029
GO:0005737
AF-A0A4R4KVC4-F1-model_v4 Oxidoreductase 0.9641 177 327
AF-A0A4R4NWB6-F1-model_v4 Oxidoreductase 0.9581 1 154

Map