F247296

General Info

Members Datasets Scaffolds Average Seq Length
165 134 330 433

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2839986021|2839988298
Length 471
Sequence PMPAAPVDGPRTTDDDVRPWTNWARTARAVPRRRASPRDEAELTEQVARAAADGLRVRAVGAGHSFTPAAVTDGLLLDLDRLAVVERIERTGDAVHVTVGAGVRLHRLNAALAAAGLAMPNLGDIDRQSVAGAISTGTHGTGQRLPGLAAQVRGVRVVGADGTVRTATPAENPGLFEASRLGLGATGVLSAVTLEVVPAFLLRAQEEPWPLDRVLDGLAAADDDADGLVGGNDHFEFYWFPHTRRALTKRNNRLAPDEEIAELERLRTSGPGAVARARTWLDEELLSNGAFELVNRVAAAVPSVTPQLNAVSARALASRTYVAPSHQVFVTARRVRFREMEYAVPREHLVDVLAAVDRWLDRSGERVPFPVEVRFAAPDDVWLSTAHGRPTAYVAVHQYARLPHERYFDAVERIVTEVGGRPHWGKLHGLDAARLRELYPRFDDFLAVRETADPDGVFTNAYTDRVLGPVR

Samples

Sample ID Description Type Environment
1 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
2 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
3 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
7 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
9 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
10 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
11 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
12 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
13 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
14 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
15 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
16 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
17 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
18 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
19 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
20 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
21 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
26 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
28 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
29 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
30 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
31 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
32 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
33 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
34 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
35 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
36 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
37 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
38 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
39 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
40 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
41 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
42 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
43 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
44 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
45 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
46 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
47 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
48 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
49 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
50 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
51 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
52 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
53 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
54 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
55 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
56 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
57 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
58 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
59 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
60 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
61 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
62 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
63 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
64 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
65 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
66 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
67 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
68 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
69 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
70 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
71 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
83 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
84 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
85 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
86 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
89 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
93 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
94 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
95 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
96 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
97 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
98 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
99 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
100 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
101 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
102 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
103 2643221549 Agromyces sp. Root1464 Isolate Unclassified
104 2643221613 Oerskovia sp. Root22 Isolate Unclassified
105 2643221619 Agromyces sp. Root81 Isolate Unclassified
106 2643221649 Leifsonia sp. Root4 Isolate Unclassified
107 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
108 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
109 2643221721 Oerskovia sp. Root918 Isolate Unclassified
110 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
111 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
112 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
113 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
114 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
115 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
116 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
117 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
118 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
119 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
120 2784132109 Dermacoccus sp. DS28 SAI-028 Isolate Unclassified
121 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
122 2808606372 Agromyces sp. 23-23 Isolate Unclassified
123 2808606394 Promicromonospora sp. C35 Isolate Unclassified
124 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
125 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
126 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
127 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
128 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
129 2919395869 Microbacterium resistens 2980 Isolate Unclassified
130 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
131 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
132 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
133 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
134 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.79
Metatranscriptomes 0.61
Isolates 20.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.24
Nodule 0
Rhizoplane 13.33
Rhizosphere 49.09
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055540_1000085 3300003792 Bacteria 105366
2 Ga0070666_10014985 3300005335 Bacteria 4939
3 Ga0070661_100141264 3300005344 Bacteria 1815
4 Ga0070668_100066359 3300005347 Bacteria 2800
5 Ga0070667_100001073 3300005367 Bacteria 25019
6 Ga0068860_100067348 3300005843 Bacteria 3402
7 Ga0081455_10003844 3300005937 Bacteria 17124
8 Ga0075430_100050526 3300006846 Bacteria 3506
9 Ga0075431_100004865 3300006847 Bacteria 13226
10 Ga0075429_100018825 3300006880 Bacteria 5981
11 Ga0111539_10106313 3300009094 Bacteria 3292
12 Ga0114129_10010968 3300009147 Bacteria 12909
13 Ga0105239_10072960 3300010375 Bacteria 3774
14 Ga0157370_10214744 3300013104 Bacteria 1782
15 Ga0157369_10048812 3300013105 Bacteria 4592
16 Ga0157369_10054886 3300013105 Bacteria 4301
17 Ga0157375_10135597 3300013308 Bacteria 2585
18 Ga0157380_10004867 3300014326 Bacteria 9355
19 Ga0206353_11271286 3300020082 Bacteria 2607
20 Ga0209646_1000092 3300025246 Bacteria 185930
21 Ga0209051_1000200 3300025303 Bacteria 106484
22 Ga0207680_10038354 3300025903 Bacteria 2773
23 Ga0207700_10179892 3300025928 Bacteria 1770
24 Ga0207661_10299044 3300025944 Bacteria 1443
25 Ga0207703_10061027 3300026035 Bacteria 3085
26 Ga0207428_10013726 3300027907 Bacteria 7062
27 Ga0268264_10069985 3300028381 Bacteria 2969
28 Ga0307515_10021111 3300028794 Bacteria 11563
29 Ga0265327_10003739 3300031251 Bacteria 14147
30 Ga0307509_10003281 3300031507 Bacteria 24863
31 Ga0307516_10008584 3300031730 Bacteria 11534
32 Ga0307516_10020624 3300031730 Bacteria 6806
33 Ga0307410_10013975 3300031852 Bacteria 4705
34 Ga0307406_10048441 3300031901 Bacteria 2684
35 Ga0307409_100059534 3300031995 Bacteria 2973
36 Ga0307416_100017960 3300032002 Bacteria 4968
37 Ga0307507_10041570 3300033179 Bacteria 4597
38 Ga0373962_0003936 3300035242 Bacteria 3574
39 Ga0373935_0012448 3300035692 Bacteria 5118
40 Ga0451791_1664933 3300041451 Bacteria 1671
41 Ga0451793_1049750 3300041452 Bacteria 2651
42 Ga0451839_0259721 3300041496 Bacteria 1493
43 Ga0451843_0803979 3300041509 Bacteria 2261
44 Ga0451843_1682325 3300041509 Bacteria 2558
45 Ga0451853_0046887 3300041512 Bacteria 2217
46 Ga0451853_0322462 3300041512 Bacteria 2043
47 Ga0466965_0000001 3300044683 Bacteria 317826
48 Ga0466965_0018121 3300044683 Bacteria 3371
49 Ga0466963_0035159 3300044694 Bacteria 3263
50 Ga0466970_0000640 3300044765 Bacteria 17211
51 Ga0466967_0148561 3300045976 Bacteria 2188
52 Ga0495627_018447 3300046453 Bacteria 2352
53 Ga0495633_0020162 3300046558 Bacteria 3357
54 Ga0496100_0000079 3300048903 Bacteria 54215
55 Ga0496100_0032185 3300048903 Bacteria 3267
56 Ga0496101_0000173 3300048904 Bacteria 51777
57 Ga0496102_0076259 3300048905 Bacteria 3083
58 Ga0496103_0000771 3300048906 Bacteria 23611
59 Ga0496106_0003743 3300048909 Bacteria 11344
60 Ga0496107_0020580 3300048910 Bacteria 4661
61 Ga0496108_0000035 3300048911 Bacteria 154937
62 Ga0496108_0004214 3300048911 Bacteria 11583
63 Ga0496109_0000108 3300048912 Bacteria 86134
64 Ga0496109_0124969 3300048912 Bacteria 2398
65 Ga0496110_0005673 3300048913 Bacteria 9798
66 Ga0496110_0036305 3300048913 Bacteria 4279
67 Ga0496111_0173101 3300048914 Bacteria 1604
68 Ga0496113_0103440 3300048916 Bacteria 2209
69 Ga0496113_0146286 3300048916 Bacteria 1862
70 Ga0496114_0000458 3300048917 Bacteria 29890
71 Ga0496114_0010099 3300048917 Bacteria 7509
72 Ga0496114_0055585 3300048917 Bacteria 3301
73 Ga0496115_0013119 3300048918 Bacteria 6258
74 Ga0496116_0001885 3300048919 Bacteria 22650
75 Ga0496117_0001585 3300048920 Bacteria 32254
76 Ga0496117_0004988 3300048920 Bacteria 14240
77 Ga0496118_0018891 3300048921 Bacteria 6183
78 Ga0496118_0065431 3300048921 Bacteria 2660
79 Ga0496119_0001948 3300048922 Bacteria 23512
80 Ga0496121_0000014 3300048924 Bacteria 609379
81 Ga0496122_0000132 3300048925 Bacteria 172228
82 Ga0496122_0000615 3300048925 Bacteria 73137
83 Ga0496122_0002290 3300048925 Bacteria 27659
84 Ga0496122_0073051 3300048925 Bacteria 2435
85 Ga0496122_0085342 3300048925 Bacteria 2179
86 Ga0496124_0000106 3300048927 Bacteria 172511
87 Ga0496124_0075428 3300048927 Bacteria 2786
88 Ga0496125_0000014 3300048928 Bacteria 610124
89 Ga0496125_0000069 3300048928 Bacteria 246981
90 Ga0496125_0012279 3300048928 Bacteria 8514
91 Ga0496125_0062335 3300048928 Bacteria 2983
92 Ga0496126_0000017 3300048929 Bacteria 610676
93 Ga0496126_0013989 3300048929 Bacteria 8134
94 Ga0501031_0015734 3300049568 Bacteria 4910
95 Ga0501032_0002596 3300049569 Bacteria 14140
96 Ga0501032_0060633 3300049569 Bacteria 2537
97 Ga0501033_0031832 3300049570 Bacteria 3960
98 Ga0501034_0003478 3300049571 Bacteria 17894
99 Ga0501034_0046705 3300049571 Bacteria 4375
100 Ga0501036_0010369 3300049572 Bacteria 7694
101 Ga0501036_0074210 3300049572 Bacteria 2877
102 Ga0501036_0090120 3300049572 Bacteria 2591
103 Ga0501038_0001945 3300049574 Bacteria 19054
104 Ga0501038_0003922 3300049574 Bacteria 13836
105 Ga0501040_0042244 3300049576 Bacteria 3105
106 Ga0501041_0066862 3300049577 Bacteria 2203
107 Ga0501043_0182487 3300049579 Bacteria 1635
108 Ga0501047_0005830 3300049581 Bacteria 11591
109 Ga0501048_0020965 3300049582 Bacteria 4788
110 Ga0501067_0017204 3300049583 Bacteria 3996
111 Ga0501070_0108959 3300049586 Bacteria 2288
112 Ga0501075_0100789 3300049591 Bacteria 2193
113 Ga0501083_0003429 3300049744 Bacteria 11069
114 Ga0501035_0036960 3300049822 Bacteria 4424
115 Ga0501044_0030949 3300049823 Bacteria 5635
116 Ga0501045_0098760 3300049824 Bacteria 2160
117 nmdc:mga00v17_156500_c1 3300050491 Bacteria 1465
118 nmdc:mga00v17_36478_c1 3300050491 Bacteria 2930
119 nmdc:mga00v17_51229_c1 3300050491 Bacteria 2510
120 nmdc:mga05p37_1498_c1 3300050507 Bacteria 27106
121 nmdc:mga09592_696_c1 3300050508 Bacteria 25711
122 nmdc:mga06r32_68_c1 3300050510 Bacteria 67093
123 nmdc:mga08y16_11636_c1 3300050511 Bacteria 9244
124 nmdc:mga0a205_29165_c1 3300050515 Bacteria 5281
125 Ga0495619_0048184 3300053085 Bacteria 2808
126 Ga0500568_0000164 3300053139 Bacteria 57135
127 Ga0500634_0000179 3300053161 Bacteria 21017
128 Ga0501084_0135022 3300054114 Bacteria 2077
129 Ga0501082_0031065 3300060353 Bacteria 4603
130 Ga0501082_0065980 3300060353 Bacteria 3117
131 Ga0530510_0037812 3300061734 Bacteria 3482
132 2839988298 2839986021 Bacteria 3685650
133 2587864336 2585428094 Bacteria 3604039
134 2643769776 2643221549 Bacteria 4042819
135 2644080845 2643221613 Bacteria 4622396
136 2644114433 2643221619 Bacteria 4158469
137 2644280313 2643221649 Bacteria 3867359
138 2644504801 2643221690 Bacteria 4654705
139 2644523736 2643221694 Bacteria 4392972
140 2644663838 2643221721 Bacteria 4486924
141 2644667839 2643221722 Bacteria 4247614
142 2723641467 2721755702 Bacteria 4373124
143 2738668695 2738541264 Bacteria 5935393
144 2738694843 2738541272 Bacteria 6848551
145 2739147887 2738541356 Bacteria 5935017
146 2739325813 2738543027 Bacteria 6409078
147 2739608507 2739367654 Bacteria 6049412
148 2753269606 2751185782 Bacteria 11227053
149 2760305860 2758568522 Bacteria 5953541
150 2760625624 2758568621 Bacteria 5967089
151 2784471406 2784132109 Bacteria 3141763
152 2808872888 2808606365 Bacteria 4301966
153 2808901412 2808606372 Bacteria 4649509
154 2809030666 2808606394 Bacteria 6248540
155 2812362631 2811994880 Bacteria 4147780
156 2842889214 2842888712 Bacteria 4279094
157 2852664519 2852663356 Bacteria 4090475
158 2857723139 2857723135 Bacteria 4217853
159 2887447347 2887443736 Bacteria 4426037
160 2919396078 2919395869 Bacteria 3704152
161 2919446893 2919443155 Bacteria 4072969
162 2935410887 2935409751 Bacteria 4179611
163 2935893830 2935890801 Bacteria 4593001
164 8046353442 8046352972 Bacteria 3613806
165 8056584764 8056579771 Bacteria 5840325
166 Ga0055540_1000085
167 Ga0070666_10014985
168 Ga0070661_100141264
169 Ga0070668_100066359
170 Ga0070667_100001073
171 Ga0068860_100067348
172 Ga0081455_10003844
173 Ga0075430_100050526
174 Ga0075431_100004865
175 Ga0075429_100018825
176 Ga0111539_10106313
177 Ga0114129_10010968
178 Ga0105239_10072960
179 Ga0157370_10214744
180 Ga0157369_10048812
181 Ga0157369_10054886
182 Ga0157375_10135597
183 Ga0157380_10004867
184 Ga0206353_11271286
185 Ga0209646_1000092
186 Ga0209051_1000200
187 Ga0207680_10038354
188 Ga0207700_10179892
189 Ga0207661_10299044
190 Ga0207703_10061027
191 Ga0207428_10013726
192 Ga0268264_10069985
193 Ga0307515_10021111
194 Ga0265327_10003739
195 Ga0307509_10003281
196 Ga0307516_10008584
197 Ga0307516_10020624
198 Ga0307410_10013975
199 Ga0307406_10048441
200 Ga0307409_100059534
201 Ga0307416_100017960
202 Ga0307507_10041570
203 Ga0373962_0003936
204 Ga0373935_0012448
205 Ga0451791_1664933
206 Ga0451793_1049750
207 Ga0451839_0259721
208 Ga0451843_0803979
209 Ga0451843_1682325
210 Ga0451853_0046887
211 Ga0451853_0322462
212 Ga0466965_0000001
213 Ga0466965_0018121
214 Ga0466963_0035159
215 Ga0466970_0000640
216 Ga0466967_0148561
217 Ga0495627_018447
218 Ga0495633_0020162
219 Ga0496100_0000079
220 Ga0496100_0032185
221 Ga0496101_0000173
222 Ga0496102_0076259
223 Ga0496103_0000771
224 Ga0496106_0003743
225 Ga0496107_0020580
226 Ga0496108_0000035
227 Ga0496108_0004214
228 Ga0496109_0000108
229 Ga0496109_0124969
230 Ga0496110_0005673
231 Ga0496110_0036305
232 Ga0496111_0173101
233 Ga0496113_0103440
234 Ga0496113_0146286
235 Ga0496114_0000458
236 Ga0496114_0010099
237 Ga0496114_0055585
238 Ga0496115_0013119
239 Ga0496116_0001885
240 Ga0496117_0001585
241 Ga0496117_0004988
242 Ga0496118_0018891
243 Ga0496118_0065431
244 Ga0496119_0001948
245 Ga0496121_0000014
246 Ga0496122_0000132
247 Ga0496122_0000615
248 Ga0496122_0002290
249 Ga0496122_0073051
250 Ga0496122_0085342
251 Ga0496124_0000106
252 Ga0496124_0075428
253 Ga0496125_0000014
254 Ga0496125_0000069
255 Ga0496125_0012279
256 Ga0496125_0062335
257 Ga0496126_0000017
258 Ga0496126_0013989
259 Ga0501031_0015734
260 Ga0501032_0002596
261 Ga0501032_0060633
262 Ga0501033_0031832
263 Ga0501034_0003478
264 Ga0501034_0046705
265 Ga0501036_0010369
266 Ga0501036_0074210
267 Ga0501036_0090120
268 Ga0501038_0001945
269 Ga0501038_0003922
270 Ga0501040_0042244
271 Ga0501041_0066862
272 Ga0501043_0182487
273 Ga0501047_0005830
274 Ga0501048_0020965
275 Ga0501067_0017204
276 Ga0501070_0108959
277 Ga0501075_0100789
278 Ga0501083_0003429
279 Ga0501035_0036960
280 Ga0501044_0030949
281 Ga0501045_0098760
282 nmdc:mga00v17_156500_c1
283 nmdc:mga00v17_36478_c1
284 nmdc:mga00v17_51229_c1
285 nmdc:mga05p37_1498_c1
286 nmdc:mga09592_696_c1
287 nmdc:mga06r32_68_c1
288 nmdc:mga08y16_11636_c1
289 nmdc:mga0a205_29165_c1
290 Ga0495619_0048184
291 Ga0500568_0000164
292 Ga0500634_0000179
293 Ga0501084_0135022
294 Ga0501082_0031065
295 Ga0501082_0065980
296 Ga0530510_0037812
297 2839988298
298 2587864336
299 2643769776
300 2644080845
301 2644114433
302 2644280313
303 2644504801
304 2644523736
305 2644663838
306 2644667839
307 2723641467
308 2738668695
309 2738694843
310 2739147887
311 2739325813
312 2739608507
313 2753269606
314 2760305860
315 2760625624
316 2784471406
317 2808872888
318 2808901412
319 2809030666
320 2812362631
321 2842889214
322 2852664519
323 2857723139
324 2887447347
325 2919396078
326 2919446893
327 2935410887
328 2935893830
329 8046353442
330 8056584764

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04030

ALO

D-arabinono-1,4-lactone oxidase

192

466

0.96

PF01565

FAD_binding_4

FAD binding domain

31

168

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1i19-assembly1.cif.gz_A crystal structure of cholesterol oxidase from b.sterolicum 0.8643 2 430
1i19-assembly2.cif.gz_B crystal structure of cholesterol oxidase from b.sterolicum 0.8578 2 430
2i0k-assembly1.cif.gz_A cholesterol oxidase from brevibacterium sterolicum- his121ala mutant 0.8568 2 430
1i19-assembly1.cif.gz_A crystal structure of cholesterol oxidase from b.sterolicum 0.8568 2 430
1i19-assembly2.cif.gz_B crystal structure of cholesterol oxidase from b.sterolicum 0.8503 2 430
ID Description Score Start End Superfamily
af_P9WIT3_297_388_3.30.70.2520 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9955 302 392 3.30.70.2520
af_P9WIT3_297_388_3.30.70.2520 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9741 302 392 3.30.70.2520
af_P58710_75_198_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9675 68 179 3.30.465.10
af_P9WIT3_70_193_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9531 68 179 3.30.465.10
af_Q2RAP0_154_280_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9525 68 179 3.30.465.10
ID Description Score Start End GO Terms
AF-A0A7K1TQU5-F1-model_v4 FAD-binding protein 0.9893 2 432 GO:0003885
GO:0016020
GO:0071949
GO:0080049
AF-A0A852YR70-F1-model_v4 deleted 0.9891 2 432
AF-A0A2N1JMM9-F1-model_v4 FAD-linked oxidoreductase 0.9888 2 432 GO:0003885
GO:0016020
GO:0071949
GO:0080049
AF-A0A543CRV4-F1-model_v4 FAD-linked oxidoreductase 0.9873 3 432 GO:0003885
GO:0016020
GO:0019853
GO:0071949
GO:0080049
AF-A0A0Q5QE48-F1-model_v4 FAD-linked oxidoreductase 0.987 1 432 GO:0003885
GO:0016020
GO:0019853
GO:0071949

Map