F247057

General Info

Members Datasets Scaffolds Average Seq Length
165 139 330 94

Family's Representative Sequence

Representative Sequence 3300048927|Ga0496124_0370646|Ga0496124_0370646_52_381
Length 109
Sequence MHAPARALPGRAEDIAMADCQVTCITKPHVNSPHEHITHLGNPPKWKWTREQVITSIDAKTNTFFVLDPKTGKRSNVGVVRPSGRLPYLQTHADGDWNNNLLSLNQCPI

Samples

Sample ID Description Type Environment
1 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
5 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
6 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
7 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
8 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
9 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
10 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
11 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
27 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
45 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
47 3300022734 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU3 Metagenome Rhizosphere
48 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
49 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
59 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
72 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
73 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
74 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
75 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
76 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
77 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
78 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
79 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
80 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
81 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
82 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
83 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
87 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
88 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
89 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
90 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
91 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
92 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
93 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
96 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
97 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
98 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
99 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
100 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
101 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
102 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
103 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
104 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
105 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
106 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
107 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
113 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
114 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
115 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
116 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
117 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
118 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
119 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
123 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
124 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
128 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
131 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
132 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
133 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
134 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
135 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
136 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
137 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
138 2831864461 Roseateles noduli HZ7 Isolate Nodule
139 2928157003 Burkholderia ambifaria 566 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.76
Metatranscriptomes 1.21
Isolates 3.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.58
Nodule 2.42
Rhizoplane 9.09
Rhizosphere 66.67
Stem 0
Stem Tuber 0
Unclassified 26.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496124_0370646 3300048927 Bacteria 1005
2 rootH2_10039230 3300003320 Bacteria 17838
3 rootH2_10071320 3300003320 Bacteria 6836
4 rootH1_10384581 3300003323 Bacteria 1704
5 Ga0055532_1000162 3300003758 Bacteria 58304
6 Ga0055525_1003743 3300003759 Bacteria 1337
7 Ga0055527_1000110 3300003760 Bacteria 58304
8 Ga0055535_1000235 3300003761 Bacteria 58304
9 Ga0055542_1002291 3300003762 Bacteria 6622
10 Ga0055529_1002071 3300003763 Bacteria 4330
11 Ga0055530_10103420 3300003791 Unclassified 569
12 Ga0055531_10003535 3300003794 Bacteria 9925
13 Ga0070658_10190330 3300005327 Bacteria 1729
14 Ga0070660_100846324 3300005339 Unclassified 770
15 Ga0070706_100252231 3300005467 Bacteria 1647
16 Ga0070698_101323153 3300005471 Unclassified 671
17 Ga0070699_100040031 3300005518 Unclassified 4059
18 Ga0070699_100053589 3300005518 Bacteria 3491
19 Ga0070699_100074980 3300005518 Unclassified 2944
20 Ga0070699_100444360 3300005518 Unclassified 1175
21 Ga0070684_101857739 3300005535 Unclassified 568
22 Ga0070697_100000719 3300005536 Bacteria 24687
23 Ga0070695_100037059 3300005545 Unclassified 3072
24 Ga0070696_100000447 3300005546 Bacteria 25838
25 Ga0070665_100800730 3300005548 Bacteria 955
26 Ga0070704_100522770 3300005549 Unclassified 1033
27 Ga0070664_100580681 3300005564 Bacteria 1038
28 Ga0068856_100563900 3300005614 Bacteria 1160
29 Ga0068856_102222256 3300005614 Unclassified 557
30 Ga0068864_100281264 3300005618 Bacteria 1553
31 Ga0075432_10052886 3300006058 Bacteria 1435
32 Ga0070715_10597420 3300006163 Unclassified 646
33 Ga0075366_10264838 3300006195 Bacteria 1049
34 Ga0075366_10503242 3300006195 Unclassified 749
35 Ga0075366_11064116 3300006195 Bacteria 505
36 Ga0075430_100309563 3300006846 Unclassified 1306
37 Ga0075433_11814812 3300006852 Unclassified 524
38 Ga0105240_10459442 3300009093 Bacteria 1423
39 Ga0105245_10018249 3300009098 Bacteria 6134
40 Ga0114129_11972595 3300009147 Bacteria 706
41 Ga0105237_10466876 3300009545 Bacteria 1268
42 Ga0105237_10648264 3300009545 Bacteria 1063
43 Ga0105237_10651144 3300009545 Bacteria 1060
44 Ga0105239_11046056 3300010375 Bacteria 939
45 Ga0105246_10792192 3300011119 Bacteria 840
46 Ga0105246_11958882 3300011119 Bacteria 564
47 Ga0157370_10275447 3300013104 Bacteria 1555
48 Ga0157369_10073062 3300013105 Bacteria 3680
49 Ga0157378_11866260 3300013297 Unclassified 650
50 Ga0157372_10841709 3300013307 Unclassified 1065
51 Ga0157372_13222395 3300013307 Unclassified 520
52 Ga0157375_10345504 3300013308 Bacteria 1653
53 Ga0163163_10001279 3300014325 Bacteria 21259
54 Ga0163161_10012928 3300017792 Bacteria 5800
55 Ga0213872_10101890 3300021361 Unclassified 1279
56 Ga0224712_10610183 3300022467 Bacteria 533
57 Ga0224569_109943 3300022732 Unclassified 673
58 Ga0224571_101898 3300022734 Unclassified 1321
59 Ga0228598_1127583 3300024227 Unclassified 517
60 Ga0209672_100059 3300025228 Bacteria 209692
61 Ga0209147_100072 3300025229 Bacteria 209692
62 Ga0209563_101031 3300025230 Bacteria 8108
63 Ga0209258_100102 3300025242 Bacteria 209692
64 Ga0209258_118118 3300025242 Unclassified 764
65 Ga0209148_1000404 3300025254 Bacteria 50146
66 Ga0209455_1000731 3300025272 Bacteria 18915
67 Ga0209673_1005390 3300025273 Bacteria 6449
68 Ga0209130_1073858 3300025284 Bacteria 562
69 Ga0209050_1001883 3300025298 Bacteria 20147
70 Ga0207426_1071468 3300025302 Bacteria 967
71 Ga0209051_1001172 3300025303 Bacteria 23803
72 Ga0209257_1001164 3300025304 Bacteria 33458
73 Ga0207705_10137672 3300025909 Bacteria 1821
74 Ga0207684_11373516 3300025910 Unclassified 579
75 Ga0207695_10356695 3300025913 Bacteria 1349
76 Ga0207671_10103157 3300025914 Bacteria 2163
77 Ga0207687_10131122 3300025927 Bacteria 1889
78 Ga0207679_10447595 3300025945 Bacteria 1145
79 Ga0207702_11714855 3300026078 Unclassified 621
80 Ga0207676_10232743 3300026095 Bacteria 1648
81 Ga0207683_12020745 3300026121 Unclassified 525
82 Ga0265338_10032773 3300028800 Bacteria 5057
83 Ga0265338_10064505 3300028800 Bacteria 3185
84 Ga0265760_10180038 3300031090 Unclassified 706
85 Ga0265325_10140371 3300031241 Bacteria 1150
86 Ga0265327_10062085 3300031251 Unclassified 1903
87 Ga0307516_10004884 3300031730 Bacteria 16323
88 Ga0373944_0131229 3300035089 Unclassified 871
89 Ga0373954_0323588 3300035118 Unclassified 761
90 Ga0373943_0231668 3300035170 Bacteria 1032
91 Ga0373955_0129386 3300035172 Bacteria 1473
92 Ga0373935_0094198 3300035692 Bacteria 1965
93 Ga0373935_0462090 3300035692 Bacteria 918
94 Ga0373927_0105506 3300035695 Bacteria 1835
95 Ga0373933_0102585 3300035724 Bacteria 1776
96 Ga0373947_0079749 3300035725 Bacteria 2024
97 Ga0373937_0107487 3300036401 Bacteria 2594
98 Ga0373925_1230838 3300037068 Unclassified 615
99 Ga0395905_0418356 3300037471 Bacteria 1236
100 Ga0395905_0515332 3300037471 Unclassified 1096
101 Ga0436361_0436538 3300039447 Unclassified 698
102 Ga0436361_0579306 3300039447 Bacteria 2241
103 Ga0466965_0011913 3300044683 Bacteria 4081
104 Ga0466966_0003690 3300044684 Bacteria 10105
105 Ga0495651_0003293 3300046462 Bacteria 12399
106 Ga0495582_0409276 3300046473 Unclassified 782
107 Ga0495639_0019732 3300046475 Bacteria 2942
108 Ga0495664_0291476 3300046477 Bacteria 986
109 Ga0495618_0105453 3300046514 Bacteria 1805
110 Ga0495628_0333212 3300046516 Unclassified 1118
111 Ga0495652_0277923 3300046529 Bacteria 1228
112 Ga0495645_0967311 3300046543 Unclassified 502
113 Ga0495625_0157148 3300046660 Bacteria 1525
114 Ga0495661_0001909 3300046665 Bacteria 16593
115 Ga0495670_0002883 3300046691 Bacteria 8472
116 Ga0495660_0000642 3300046810 Bacteria 27168
117 Ga0495660_0025998 3300046810 Bacteria 3321
118 Ga0495660_0119875 3300046810 Bacteria 1332
119 Ga0495674_0019482 3300047319 Bacteria 6297
120 Ga0495674_0436587 3300047319 Bacteria 1053
121 Ga0495684_0122423 3300047471 Bacteria 1958
122 Ga0495593_0067226 3300047673 Bacteria 1866
123 Ga0495602_0006502 3300048088 Bacteria 12261
124 Ga0496100_0289617 3300048903 Bacteria 1223
125 Ga0496101_0104931 3300048904 Bacteria 2120
126 Ga0496102_0070566 3300048905 Bacteria 3208
127 Ga0496104_0006006 3300048907 Bacteria 10644
128 Ga0496104_0372784 3300048907 Bacteria 1340
129 Ga0496105_0001596 3300048908 Bacteria 16058
130 Ga0496105_0788472 3300048908 Unclassified 723
131 Ga0496108_0002780 3300048911 Bacteria 14023
132 Ga0496109_0157355 3300048912 Bacteria 2128
133 Ga0496110_0346839 3300048913 Bacteria 1352
134 Ga0496111_0019132 3300048914 Bacteria 4752
135 Ga0496112_0003268 3300048915 Bacteria 13378
136 Ga0496113_0000561 3300048916 Bacteria 18454
137 Ga0496114_0258146 3300048917 Bacteria 1534
138 Ga0496115_0471855 3300048918 Unclassified 1011
139 Ga0496116_0363774 3300048919 Bacteria 656
140 Ga0501032_0041112 3300049569 Bacteria 3141
141 Ga0501047_0768813 3300049581 Bacteria 779
142 Ga0501070_0740473 3300049586 Bacteria 775
143 Ga0501073_0261321 3300049589 Bacteria 1195
144 Ga0501073_0806626 3300049589 Unclassified 647
145 Ga0501076_1116639 3300049592 Unclassified 649
146 Ga0501076_1410532 3300049592 Unclassified 572
147 Ga0501223_047623 3300049663 Bacteria 831
148 Ga0501079_0819232 3300049741 Bacteria 733
149 Ga0501079_0867032 3300049741 Unclassified 711
150 Ga0501080_0162241 3300049742 Bacteria 2064
151 Ga0501044_0008821 3300049823 Bacteria 11029
152 nmdc:mga0k408_253712_c1 3300050493 Bacteria 1050
153 nmdc:mga0k408_439384_c1 3300050493 Unclassified 775
154 nmdc:mga0k408_894060_c1 3300050493 Bacteria 515
155 nmdc:mga0qj67_329205_c1 3300050509 Unclassified 1236
156 nmdc:mga08x19_154814_c1 3300050514 Bacteria 1554
157 Ga0495612_0092738 3300053078 Bacteria 1280
158 Ga0500643_000002 3300053087 Bacteria 1277657
159 Ga0500644_0004404 3300053088 Bacteria 3522
160 Ga0501082_0140281 3300060353 Bacteria 2098
161 2513957796 2513237150 Bacteria 6553639
162 2514045721 2513237165 Bacteria 6771773
163 2514055666 2513237166 Bacteria 10373764
164 2831864870 2831864461 Bacteria 6502356
165 2928163325 2928157003 Bacteria 7522202
166 Ga0496124_0370646
167 rootH2_10039230
168 rootH2_10071320
169 rootH1_10384581
170 Ga0055532_1000162
171 Ga0055525_1003743
172 Ga0055527_1000110
173 Ga0055535_1000235
174 Ga0055542_1002291
175 Ga0055529_1002071
176 Ga0055530_10103420
177 Ga0055531_10003535
178 Ga0070658_10190330
179 Ga0070660_100846324
180 Ga0070706_100252231
181 Ga0070698_101323153
182 Ga0070699_100040031
183 Ga0070699_100053589
184 Ga0070699_100074980
185 Ga0070699_100444360
186 Ga0070684_101857739
187 Ga0070697_100000719
188 Ga0070695_100037059
189 Ga0070696_100000447
190 Ga0070665_100800730
191 Ga0070704_100522770
192 Ga0070664_100580681
193 Ga0068856_100563900
194 Ga0068856_102222256
195 Ga0068864_100281264
196 Ga0075432_10052886
197 Ga0070715_10597420
198 Ga0075366_10264838
199 Ga0075366_10503242
200 Ga0075366_11064116
201 Ga0075430_100309563
202 Ga0075433_11814812
203 Ga0105240_10459442
204 Ga0105245_10018249
205 Ga0114129_11972595
206 Ga0105237_10466876
207 Ga0105237_10648264
208 Ga0105237_10651144
209 Ga0105239_11046056
210 Ga0105246_10792192
211 Ga0105246_11958882
212 Ga0157370_10275447
213 Ga0157369_10073062
214 Ga0157378_11866260
215 Ga0157372_10841709
216 Ga0157372_13222395
217 Ga0157375_10345504
218 Ga0163163_10001279
219 Ga0163161_10012928
220 Ga0213872_10101890
221 Ga0224712_10610183
222 Ga0224569_109943
223 Ga0224571_101898
224 Ga0228598_1127583
225 Ga0209672_100059
226 Ga0209147_100072
227 Ga0209563_101031
228 Ga0209258_100102
229 Ga0209258_118118
230 Ga0209148_1000404
231 Ga0209455_1000731
232 Ga0209673_1005390
233 Ga0209130_1073858
234 Ga0209050_1001883
235 Ga0207426_1071468
236 Ga0209051_1001172
237 Ga0209257_1001164
238 Ga0207705_10137672
239 Ga0207684_11373516
240 Ga0207695_10356695
241 Ga0207671_10103157
242 Ga0207687_10131122
243 Ga0207679_10447595
244 Ga0207702_11714855
245 Ga0207676_10232743
246 Ga0207683_12020745
247 Ga0265338_10032773
248 Ga0265338_10064505
249 Ga0265760_10180038
250 Ga0265325_10140371
251 Ga0265327_10062085
252 Ga0307516_10004884
253 Ga0373944_0131229
254 Ga0373954_0323588
255 Ga0373943_0231668
256 Ga0373955_0129386
257 Ga0373935_0094198
258 Ga0373935_0462090
259 Ga0373927_0105506
260 Ga0373933_0102585
261 Ga0373947_0079749
262 Ga0373937_0107487
263 Ga0373925_1230838
264 Ga0395905_0418356
265 Ga0395905_0515332
266 Ga0436361_0436538
267 Ga0436361_0579306
268 Ga0466965_0011913
269 Ga0466966_0003690
270 Ga0495651_0003293
271 Ga0495582_0409276
272 Ga0495639_0019732
273 Ga0495664_0291476
274 Ga0495618_0105453
275 Ga0495628_0333212
276 Ga0495652_0277923
277 Ga0495645_0967311
278 Ga0495625_0157148
279 Ga0495661_0001909
280 Ga0495670_0002883
281 Ga0495660_0000642
282 Ga0495660_0025998
283 Ga0495660_0119875
284 Ga0495674_0019482
285 Ga0495674_0436587
286 Ga0495684_0122423
287 Ga0495593_0067226
288 Ga0495602_0006502
289 Ga0496100_0289617
290 Ga0496101_0104931
291 Ga0496102_0070566
292 Ga0496104_0006006
293 Ga0496104_0372784
294 Ga0496105_0001596
295 Ga0496105_0788472
296 Ga0496108_0002780
297 Ga0496109_0157355
298 Ga0496110_0346839
299 Ga0496111_0019132
300 Ga0496112_0003268
301 Ga0496113_0000561
302 Ga0496114_0258146
303 Ga0496115_0471855
304 Ga0496116_0363774
305 Ga0501032_0041112
306 Ga0501047_0768813
307 Ga0501070_0740473
308 Ga0501073_0261321
309 Ga0501073_0806626
310 Ga0501076_1116639
311 Ga0501076_1410532
312 Ga0501223_047623
313 Ga0501079_0819232
314 Ga0501079_0867032
315 Ga0501080_0162241
316 Ga0501044_0008821
317 nmdc:mga0k408_253712_c1
318 nmdc:mga0k408_439384_c1
319 nmdc:mga0k408_894060_c1
320 nmdc:mga0qj67_329205_c1
321 nmdc:mga08x19_154814_c1
322 Ga0495612_0092738
323 Ga0500643_000002
324 Ga0500644_0004404
325 Ga0501082_0140281
326 2513957796
327 2514045721
328 2514055666
329 2831864870
330 2928163325

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13031

DUF3892

Protein of unknown function (DUF3892)

21

105

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2x5c-assembly2.cif.gz_B crystal structure of hypothetical protein orf131 from pyrobaculum spherical virus 0.6478 37 84
3vs1-assembly1.cif.gz_A crystal structure of hck complexed with a pyrrolo-pyrimidine inhibitor 1-[4-(4-amino-7-cyclopentyl-7h-pyrrolo[2,3-d]pyrimidin-5-yl)phenyl]-3-phenylurea 0.6067 48 77
1flg-assembly1.cif.gz_B crystal structure of the quinoprotein ethanol dehydrogenase from pseudomonas aeruginosa 0.575 47 82
7c3f-assembly7.cif.gz_T crystal structure of ferredoxin: thioredoxin reductase and thioredoxin m2 complex 0.5682 52 77
5d39-assembly3.cif.gz_D transcription factor-dna complex 0.5267 48 88
ID Description Score Start End Superfamily
af_A1Z7G6_207_415_3.90.215.10 Alpha Beta;Alpha-Beta Complex;Gamma Fibrinogen; Chain A, domain 1;Gamma Fibrinogen, chain A, domain 1 0.8974 60 76 3.90.215.10
af_Q9VW70_229_421_3.90.215.10 Alpha Beta;Alpha-Beta Complex;Gamma Fibrinogen; Chain A, domain 1;Gamma Fibrinogen, chain A, domain 1 0.7506 56 79 3.90.215.10
2x5cB01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.6478 37 84 3.30.70.3590
af_Q5PR93_2_246_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.6032 59 85 2.130.10.10
af_Q2FYA1_524_650_3.30.70.370 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.5926 48 80 3.30.70.370
ID Description Score Start End GO Terms
AF-A0A120G5D9-F1-model_v4 DUF3892 domain-containing protein 0.9701 1 94
AF-A0A7Y6NTD1-F1-model_v4 DUF3892 domain-containing protein 0.9614 3 95
AF-A0A7Z0F5K3-F1-model_v4 deleted 0.9395 1 97
AF-A0A7Y9XNF9-F1-model_v4 DUF3892 domain-containing protein 0.9382 1 97
AF-A0A368YL09-F1-model_v4 Uncharacterized protein DUF3892 0.9339 1 93

Map