F246452

General Info

Members Datasets Scaffolds Average Seq Length
165 117 330 347

Family's Representative Sequence

Representative Sequence 3300030760|Ga0265762_1005051|Ga0265762_10050512
Length 371
Sequence MGRAGLNRETALATLTLTLAAEAPDLDILSRLRGPAFGFAHHRGFTHSFLGVPLDAAVVVSFVYLLWRWRGRKLKNPNLPPRWGLLFLYACLAGLSHILLDFTNNYGVRPFWPFSEKWYSWDIVFIFEPIMFTCLLLGLIAPSLFSLIDQEIGARQPGPRGRVAAALALISVVLLWSLRDFEHRRAVNALEARTYSGFDAARASAYPDLANPFRWYGVVETPNFFVLAPVDSLGPEVDPDDSDNGKLEIRYKPEETPASLAAKRSYLGRVYLDWAQYPITQTEVLESPEPGYIVNFQDLRYAQLPSLFSRLRGGHERASKPLGAGVRLDRNLNVLGDVYGSGGDRVTFPEPSSSVAAPPETLDATALQRPQ

Samples

Sample ID Description Type Environment
1 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
21 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
30 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
39 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
40 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
41 3300022734 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU3 Metagenome Rhizosphere
42 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
43 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
44 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
61 3300028036 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 Metagenome Rhizosphere
62 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
69 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
70 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
71 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
72 3300033545 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 Metagenome Unclassified
73 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
74 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
75 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
76 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
77 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
78 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
79 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
80 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
81 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
85 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
86 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
89 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
90 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
91 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
96 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
97 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
98 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
99 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
100 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
101 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
102 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
103 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
104 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
105 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
113 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
114 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
115 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
116 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
117 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.58
Metatranscriptomes 2.42
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.27
Rhizosphere 89.7
Stem 0
Stem Tuber 0
Unclassified 23.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265762_1005051 3300030760 Unclassified 2363
2 Ga0070683_100267074 3300005329 Unclassified 1627
3 Ga0070666_10144999 3300005335 Unclassified 1655
4 Ga0068868_100001186 3300005338 Bacteria 17863
5 Ga0070661_100013164 3300005344 Bacteria 5805
6 Ga0070659_100208685 3300005366 Bacteria 1609
7 Ga0070709_10000712 3300005434 Bacteria 18853
8 Ga0070709_10022779 3300005434 Unclassified 3670
9 Ga0070709_10065211 3300005434 Bacteria 2331
10 Ga0070714_100004645 3300005435 Bacteria 10364
11 Ga0070714_100010175 3300005435 Bacteria 7425
12 Ga0070713_100000060 3300005436 Bacteria 69784
13 Ga0070713_100000108 3300005436 Bacteria 53977
14 Ga0070710_10001429 3300005437 Bacteria 11278
15 Ga0070710_10005186 3300005437 Bacteria 6174
16 Ga0070710_10020718 3300005437 Unclassified 3416
17 Ga0070711_100006932 3300005439 Bacteria 6871
18 Ga0070711_100007239 3300005439 Bacteria 6742
19 Ga0070711_100020450 3300005439 Unclassified 4266
20 Ga0070706_100015574 3300005467 Bacteria 7023
21 Ga0070707_100031173 3300005468 Bacteria 5077
22 Ga0070699_100052636 3300005518 Bacteria 3522
23 Ga0068853_100095868 3300005539 Unclassified 2617
24 Ga0070696_100027498 3300005546 Bacteria 3876
25 Ga0070696_100307248 3300005546 Bacteria 1216
26 Ga0068857_100287971 3300005577 Bacteria 1512
27 Ga0068856_100002790 3300005614 Bacteria 17880
28 Ga0068852_100037816 3300005616 Unclassified 4050
29 Ga0068866_10021244 3300005718 Bacteria 2988
30 Ga0068851_10082851 3300005834 Bacteria 1677
31 Ga0068863_100026125 3300005841 Bacteria 5572
32 Ga0081540_1065207 3300005983 Unclassified 1713
33 Ga0070717_10017811 3300006028 Bacteria 5536
34 Ga0070717_10018150 3300006028 Bacteria 5490
35 Ga0070717_10314999 3300006028 Bacteria 1393
36 Ga0070716_100002970 3300006173 Bacteria 7907
37 Ga0070716_100032594 3300006173 Bacteria 2843
38 Ga0070716_100175459 3300006173 Bacteria 1402
39 Ga0070712_100000212 3300006175 Bacteria 32865
40 Ga0070712_100003881 3300006175 Bacteria 9207
41 Ga0070712_100004565 3300006175 Bacteria 8550
42 Ga0070712_100063681 3300006175 Unclassified 2612
43 Ga0068871_100028744 3300006358 Bacteria 4362
44 Ga0075436_100000610 3300006914 Bacteria 23409
45 Ga0105241_10106506 3300009174 Bacteria 2238
46 Ga0105242_10019221 3300009176 Bacteria 5352
47 Ga0105248_10027164 3300009177 Bacteria 6367
48 Ga0105248_10220167 3300009177 Bacteria 2137
49 Ga0105238_10016350 3300009551 Bacteria 7510
50 Ga0105239_10107781 3300010375 Bacteria 3086
51 Ga0105239_10138875 3300010375 Bacteria 2707
52 Ga0157374_10192297 3300013296 Unclassified 1996
53 Ga0157378_10001213 3300013297 Bacteria 23389
54 Ga0157378_10061847 3300013297 Bacteria 3343
55 Ga0157372_10287325 3300013307 Bacteria 1913
56 Ga0157376_10097850 3300014969 Unclassified 2557
57 Ga0182006_1010609 3300015261 Unclassified 4089
58 Ga0182007_10015673 3300015262 Unclassified 2819
59 Ga0213872_10001906 3300021361 Bacteria 12798
60 Ga0213872_10005609 3300021361 Bacteria 6410
61 Ga0224571_100013 3300022734 Bacteria 5210
62 Ga0224572_1005116 3300024225 Bacteria 2323
63 Ga0228598_1001553 3300024227 Bacteria 5032
64 Ga0207692_10000927 3300025898 Bacteria 10613
65 Ga0207642_10028350 3300025899 Bacteria 2305
66 Ga0207699_10021973 3300025906 Unclassified 3449
67 Ga0207705_10329964 3300025909 Bacteria 1173
68 Ga0207671_10167129 3300025914 Unclassified 1706
69 Ga0207693_10000042 3300025915 Bacteria 104665
70 Ga0207693_10000191 3300025915 Bacteria 56013
71 Ga0207693_10021738 3300025915 Bacteria 5100
72 Ga0207693_10046414 3300025915 Unclassified 3412
73 Ga0207693_10100497 3300025915 Bacteria 2268
74 Ga0207663_10010310 3300025916 Unclassified 4968
75 Ga0207646_10107813 3300025922 Bacteria 2499
76 Ga0207646_10171260 3300025922 Bacteria 1961
77 Ga0207700_10048170 3300025928 Unclassified 3163
78 Ga0207700_10058186 3300025928 Unclassified 2919
79 Ga0207664_10000456 3300025929 Bacteria 29054
80 Ga0207664_10185781 3300025929 Bacteria 1787
81 Ga0207690_10032926 3300025932 Unclassified 3329
82 Ga0207686_10016022 3300025934 Bacteria 4202
83 Ga0207665_10020694 3300025939 Bacteria 4326
84 Ga0207665_10045594 3300025939 Bacteria 2936
85 Ga0207711_10065109 3300025941 Bacteria 3150
86 Ga0207677_10042024 3300026023 Unclassified 3028
87 Ga0207702_10000536 3300026078 Bacteria 42507
88 Ga0265356_1000161 3300028017 Bacteria 12148
89 Ga0265355_1001018 3300028036 Viruses 1706
90 Ga0268264_10159591 3300028381 Bacteria 2030
91 Ga0265338_10026486 3300028800 Bacteria 5845
92 Ga0265762_1006869 3300030760 Bacteria 2034
93 Ga0265770_1004789 3300030878 Bacteria 1854
94 Ga0265760_10003119 3300031090 Bacteria 4843
95 Ga0265330_10007543 3300031235 Bacteria 5294
96 Ga0265325_10009397 3300031241 Bacteria 5706
97 Ga0265340_10062311 3300031247 Bacteria 1782
98 Ga0265316_10021021 3300031344 Bacteria 5537
99 Ga0265314_10008268 3300031711 Bacteria 8933
100 Ga0265342_10055443 3300031712 Bacteria 2353
101 Ga0316214_1006059 3300033545 Bacteria 1592
102 Ga0373926_0007327 3300035083 Bacteria 3677
103 Ga0373936_0000720 3300035113 Bacteria 11543
104 Ga0373936_0004442 3300035113 Bacteria 5304
105 Ga0373945_0001435 3300035116 Bacteria 7259
106 Ga0373956_0060377 3300035119 Unclassified 1716
107 Ga0373943_0000391 3300035170 Bacteria 18446
108 Ga0373943_0021162 3300035170 Unclassified 3003
109 Ga0373943_0101586 3300035170 Bacteria 1505
110 Ga0373935_0000392 3300035692 Bacteria 22592
111 Ga0373935_0007922 3300035692 Bacteria 6372
112 Ga0373927_0004658 3300035695 Bacteria 9561
113 Ga0373933_0100466 3300035724 Unclassified 1794
114 Ga0373947_0000539 3300035725 Bacteria 22153
115 Ga0373947_0170401 3300035725 Unclassified 1412
116 Ga0373925_0002698 3300037068 Bacteria 14073
117 Ga0373925_0014239 3300037068 Bacteria 5754
118 Ga0373925_0145566 3300037068 Unclassified 1857
119 Ga0436365_0818591 3300039437 Bacteria 2982
120 Ga0436365_1522498 3300039437 Bacteria 2025
121 Ga0436360_0832590 3300039438 Unclassified 4703
122 Ga0436361_0000785 3300039447 Bacteria 3885
123 Ga0436361_0493309 3300039447 Bacteria 8385
124 Ga0436361_1152091 3300039447 Bacteria 22513
125 Ga0436363_0781887 3300039450 Bacteria 1183
126 Ga0436363_1437941 3300039450 Unclassified 1322
127 Ga0451577_0000969 3300042876 Bacteria 41995
128 Ga0451577_0069818 3300042876 Unclassified 3133
129 Ga0453683_0017766 3300044673 Bacteria 4575
130 Ga0466963_0037774 3300044694 Bacteria 3156
131 Ga0466964_0064028 3300044706 Bacteria 1537
132 Ga0453684_0000803 3300044712 Bacteria 107106
133 Ga0451576_0005970 3300045051 Bacteria 15079
134 Ga0451576_0074992 3300045051 Unclassified 3520
135 Ga0466958_0061660 3300045836 Bacteria 2285
136 Ga0495651_0115906 3300046462 Bacteria 1975
137 Ga0495580_0001596 3300046472 Bacteria 19898
138 Ga0495580_0098127 3300046472 Bacteria 2038
139 Ga0495582_0004610 3300046473 Bacteria 7744
140 Ga0495664_0001026 3300046477 Bacteria 14447
141 Ga0495630_0027609 3300046517 Bacteria 4213
142 Ga0495630_0033046 3300046517 Bacteria 3858
143 Ga0495645_0102508 3300046543 Bacteria 2034
144 Ga0495635_0244031 3300046663 Unclassified 1212
145 Ga0495658_0001041 3300046683 Bacteria 14661
146 Ga0495624_0064061 3300046690 Bacteria 2298
147 Ga0495674_0002529 3300047319 Bacteria 17789
148 Ga0495674_0004343 3300047319 Bacteria 13627
149 Ga0495602_0166812 3300048088 Unclassified 1713
150 Ga0495602_0288679 3300048088 Bacteria 1205
151 Ga0496101_0070202 3300048904 Bacteria 2565
152 Ga0496102_0179524 3300048905 Bacteria 1994
153 Ga0496103_0159153 3300048906 Bacteria 1448
154 Ga0496104_0189772 3300048907 Unclassified 1966
155 Ga0496106_0078719 3300048909 Unclassified 2530
156 Ga0496109_0163893 3300048912 Bacteria 2083
157 Ga0496110_0325740 3300048913 Bacteria 1399
158 Ga0496111_0103658 3300048914 Unclassified 2092
159 Ga0496112_0170155 3300048915 Bacteria 2144
160 Ga0496112_0580523 3300048915 Bacteria 1053
161 Ga0496115_0029530 3300048918 Bacteria 4306
162 Ga0496115_0148767 3300048918 Unclassified 1933
163 Ga0501073_0019623 3300049589 Bacteria 4878
164 Ga0501083_0125603 3300049744 Unclassified 1682
165 nmdc:mga08x19_2150_c1 3300050514 Bacteria 12040
166 Ga0265762_1005051
167 Ga0070683_100267074
168 Ga0070666_10144999
169 Ga0068868_100001186
170 Ga0070661_100013164
171 Ga0070659_100208685
172 Ga0070709_10000712
173 Ga0070709_10022779
174 Ga0070709_10065211
175 Ga0070714_100004645
176 Ga0070714_100010175
177 Ga0070713_100000060
178 Ga0070713_100000108
179 Ga0070710_10001429
180 Ga0070710_10005186
181 Ga0070710_10020718
182 Ga0070711_100006932
183 Ga0070711_100007239
184 Ga0070711_100020450
185 Ga0070706_100015574
186 Ga0070707_100031173
187 Ga0070699_100052636
188 Ga0068853_100095868
189 Ga0070696_100027498
190 Ga0070696_100307248
191 Ga0068857_100287971
192 Ga0068856_100002790
193 Ga0068852_100037816
194 Ga0068866_10021244
195 Ga0068851_10082851
196 Ga0068863_100026125
197 Ga0081540_1065207
198 Ga0070717_10017811
199 Ga0070717_10018150
200 Ga0070717_10314999
201 Ga0070716_100002970
202 Ga0070716_100032594
203 Ga0070716_100175459
204 Ga0070712_100000212
205 Ga0070712_100003881
206 Ga0070712_100004565
207 Ga0070712_100063681
208 Ga0068871_100028744
209 Ga0075436_100000610
210 Ga0105241_10106506
211 Ga0105242_10019221
212 Ga0105248_10027164
213 Ga0105248_10220167
214 Ga0105238_10016350
215 Ga0105239_10107781
216 Ga0105239_10138875
217 Ga0157374_10192297
218 Ga0157378_10001213
219 Ga0157378_10061847
220 Ga0157372_10287325
221 Ga0157376_10097850
222 Ga0182006_1010609
223 Ga0182007_10015673
224 Ga0213872_10001906
225 Ga0213872_10005609
226 Ga0224571_100013
227 Ga0224572_1005116
228 Ga0228598_1001553
229 Ga0207692_10000927
230 Ga0207642_10028350
231 Ga0207699_10021973
232 Ga0207705_10329964
233 Ga0207671_10167129
234 Ga0207693_10000042
235 Ga0207693_10000191
236 Ga0207693_10021738
237 Ga0207693_10046414
238 Ga0207693_10100497
239 Ga0207663_10010310
240 Ga0207646_10107813
241 Ga0207646_10171260
242 Ga0207700_10048170
243 Ga0207700_10058186
244 Ga0207664_10000456
245 Ga0207664_10185781
246 Ga0207690_10032926
247 Ga0207686_10016022
248 Ga0207665_10020694
249 Ga0207665_10045594
250 Ga0207711_10065109
251 Ga0207677_10042024
252 Ga0207702_10000536
253 Ga0265356_1000161
254 Ga0265355_1001018
255 Ga0268264_10159591
256 Ga0265338_10026486
257 Ga0265762_1006869
258 Ga0265770_1004789
259 Ga0265760_10003119
260 Ga0265330_10007543
261 Ga0265325_10009397
262 Ga0265340_10062311
263 Ga0265316_10021021
264 Ga0265314_10008268
265 Ga0265342_10055443
266 Ga0316214_1006059
267 Ga0373926_0007327
268 Ga0373936_0000720
269 Ga0373936_0004442
270 Ga0373945_0001435
271 Ga0373956_0060377
272 Ga0373943_0000391
273 Ga0373943_0021162
274 Ga0373943_0101586
275 Ga0373935_0000392
276 Ga0373935_0007922
277 Ga0373927_0004658
278 Ga0373933_0100466
279 Ga0373947_0000539
280 Ga0373947_0170401
281 Ga0373925_0002698
282 Ga0373925_0014239
283 Ga0373925_0145566
284 Ga0436365_0818591
285 Ga0436365_1522498
286 Ga0436360_0832590
287 Ga0436361_0000785
288 Ga0436361_0493309
289 Ga0436361_1152091
290 Ga0436363_0781887
291 Ga0436363_1437941
292 Ga0451577_0000969
293 Ga0451577_0069818
294 Ga0453683_0017766
295 Ga0466963_0037774
296 Ga0466964_0064028
297 Ga0453684_0000803
298 Ga0451576_0005970
299 Ga0451576_0074992
300 Ga0466958_0061660
301 Ga0495651_0115906
302 Ga0495580_0001596
303 Ga0495580_0098127
304 Ga0495582_0004610
305 Ga0495664_0001026
306 Ga0495630_0027609
307 Ga0495630_0033046
308 Ga0495645_0102508
309 Ga0495635_0244031
310 Ga0495658_0001041
311 Ga0495624_0064061
312 Ga0495674_0002529
313 Ga0495674_0004343
314 Ga0495602_0166812
315 Ga0495602_0288679
316 Ga0496101_0070202
317 Ga0496102_0179524
318 Ga0496103_0159153
319 Ga0496104_0189772
320 Ga0496106_0078719
321 Ga0496109_0163893
322 Ga0496110_0325740
323 Ga0496111_0103658
324 Ga0496112_0170155
325 Ga0496112_0580523
326 Ga0496115_0029530
327 Ga0496115_0148767
328 Ga0501073_0019623
329 Ga0501083_0125603
330 nmdc:mga08x19_2150_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04307

YdjM

LexA-binding, inner membrane-associated putative hydrolase

1

184

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wmi-assembly1.cif.gz_A crystal structure of archaeal rele-relb complex from pyrococcus horikoshii ot3 0.7561 211 255
7d11-assembly1.cif.gz_A solution structure of a wkry dna-binding domain 0.693 281 333
3a2v-assembly1.cif.gz_F peroxiredoxin (c207s) from aeropyrum pernix k1 complexed with hydrogen peroxide 0.5304 302 334
7ekr-assembly1.cif.gz_A the crystal structure of orange carotenoid binding protein 1 (ocp1) 0.521 282 332
6b46-assembly1.cif.gz_I cryo-em structure of type i-f crispr crrna-guided csy surveillance complex with bound anti-crispr protein acrf1 0.515 206 266
ID Description Score Start End Superfamily
af_Q8S2H5_315_629_3.60.21.10 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.6597 221 258 3.60.21.10
4eo3B01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.6111 310 332 3.40.30.10
4r80B00 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.6082 188 253 3.10.450.630
af_Q4D6I2_111_215_3.30.40.10 Alpha Beta;2-Layer Sandwich;Herpes Virus-1;Zinc/RING finger domain, C3HC4 (zinc finger) 0.5795 203 260 3.30.40.10
af_O23349_22_119_3.10.450.40 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.5582 261 333 3.10.450.40
ID Description Score Start End GO Terms
AF-A0A2V9Z4S2-F1-model_v4 Metal-dependent hydrolase 0.9636 1 334 GO:0016020
GO:0016787
AF-A0A2V9TQX6-F1-model_v4 Metal-dependent hydrolase 0.946 1 334 GO:0016020
GO:0016787
AF-A0A2V9NDT6-F1-model_v4 Metal-dependent hydrolase 0.9323 45 334 GO:0016020
GO:0016787
AF-A0A2V9Z4S2-F1-model_v4 Metal-dependent hydrolase 0.9283 1 334 GO:0016020
GO:0016787
AF-A0A1Q7N4L7-F1-model_v4 Metal-dependent hydrolase 0.9282 1 277 GO:0016020

Map