F245878

General Info

Members Datasets Scaffolds Average Seq Length
165 93 164 914

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100029243|Ga0075428_1000292433
Length 959
Sequence MSLPAIRTLALDRLDVGSRRYDIYRLSALADAGIGGGLDRLPYSLKVLLENMLRHHDGVRITDDDVTALATWSGGGSRGGQEREIAFLPARVLMQDFTGVPAVVDLAAMRQAVADRSGDPQGLDPLIPADLVIDHSVQVDVYGRPDALVRNAELEYERNVERYQFLRWGQQAFGRFRVVPPATGICHQVNLEYLATVVATRNGVAFPDTLVGTDSHTPMINGLGVVGWGVGGIEAEAALLGQPISMLIPDVVGFKLSGEIPEGATATDLVLTVTNLLRSHGVVGRFVEFYGPGVANVPLENRATIGNMSPEYGSTVTIFPIDQETLRYLQFTGRSDERVALVEAYAKEQGLWHDPGHEPVFSETLELDLSTVEPSIAGPARPQDRVPLREAKQRFAVAVVGSLPDPPGGDRPAETPVRAPSSRYDLADAASFPASDPPVGHPNDAASDDAGXGTTEAXXXXTVPAASPERPHAAVPVQLDGSSFELDHGHVAIAAITSCTNTSNPQVMVAAGLLARRAVERGLAVKPWVKTSLAPGSKVVTDYLDRAGLLPYLEKLGFDVVGYGCTTCIGNSGPLPEAIARAADEHGLALVSVLSGNRNFEGRINPDVRMNYLASPPLVVAYALAGTMDVDLISEPLGTGADGEPVLLADLWPSPAEVNAVVESALESDMFRAAYGQVFDGDERWRALPVPPGGAYVWDEASTYVRRPPYFDQLPDDPPPLSDIVGARALAVLGDSVTTDHISPAGAIHPSSPAGQWLIASGVEPRDFNSYGARRGNHEVMIRGTFANRRIRNRLAPGTEGGVTRHQPSGEEMTIYDAAERYRTEGVPLVVLAGREYGSGSSRDWAAKGTALLGVRAVVAESFERIHRSNLIGMGVLPLQLAEGTTWADLGVDGTEVFTVHGLEGVDAGSLIGASLTVMAGDTAVPVVARIDTQVEAAYYEHGGILPFVLRQHLATTRR

Samples

Sample ID Description Type Environment
1 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
27 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
28 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
39 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
40 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
41 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
42 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
43 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
44 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
45 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
46 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
47 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
48 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
49 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
50 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
51 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
52 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
53 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
54 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
55 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
56 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
69 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
70 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
71 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
72 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
73 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
74 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
75 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
76 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
77 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
78 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
79 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
80 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
81 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
82 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
85 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
86 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
87 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
88 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
89 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
90 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
91 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
92 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
93 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.79
Metatranscriptomes 0.61
Isolates 0.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.61
Nodule 0
Rhizoplane 0
Rhizosphere 98.79
Stem 0
Stem Tuber 0
Unclassified 0.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10000178 3300005327 Bacteria 55790
2 Ga0070680_100006834 3300005336 Bacteria 8696
3 Ga0070675_100022256 3300005354 Bacteria 5063
4 Ga0070705_100002050 3300005440 Bacteria 10292
5 Ga0070708_100000260 3300005445 Bacteria 39509
6 Ga0070708_100003606 3300005445 Bacteria 12147
7 Ga0070708_100004450 3300005445 Bacteria 11022
8 Ga0070708_100005124 3300005445 Bacteria 10372
9 Ga0070681_10013672 3300005458 Bacteria 8079
10 Ga0070706_100000663 3300005467 Bacteria 39246
11 Ga0070706_100000828 3300005467 Bacteria 34212
12 Ga0070706_100000902 3300005467 Bacteria 32490
13 Ga0070706_100009483 3300005467 Bacteria 9052
14 Ga0070706_100011216 3300005467 Bacteria 8323
15 Ga0070707_100000479 3300005468 Bacteria 39520
16 Ga0070707_100001662 3300005468 Bacteria 21540
17 Ga0070707_100006810 3300005468 Bacteria 10581
18 Ga0070698_100003111 3300005471 Bacteria 18293
19 Ga0070698_100035696 3300005471 Bacteria 5138
20 Ga0070699_100001272 3300005518 Bacteria 23229
21 Ga0070699_100001375 3300005518 Bacteria 22346
22 Ga0070699_100001537 3300005518 Bacteria 21084
23 Ga0070699_100008105 3300005518 Bacteria 9122
24 Ga0070699_100028841 3300005518 Bacteria 4785
25 Ga0070697_100000270 3300005536 Bacteria 42249
26 Ga0070697_100002982 3300005536 Bacteria 13002
27 Ga0070697_100007281 3300005536 Bacteria 8607
28 Ga0070697_100008709 3300005536 Bacteria 7925
29 Ga0070696_100002641 3300005546 Bacteria 11884
30 Ga0070704_100007687 3300005549 Bacteria 6424
31 Ga0081455_10004300 3300005937 Bacteria 16033
32 Ga0081538_10000159 3300005981 Bacteria 71002
33 Ga0081538_10003326 3300005981 Bacteria 15225
34 Ga0081538_10003398 3300005981 Bacteria 15068
35 Ga0070717_10000002 3300006028 Bacteria 378525
36 Ga0075428_100006324 3300006844 Bacteria 13173
37 Ga0075428_100011568 3300006844 Bacteria 9817
38 Ga0075428_100029243 3300006844 Bacteria 6097
39 Ga0075430_100001158 3300006846 Bacteria 21065
40 Ga0075431_100002378 3300006847 Bacteria 18084
41 Ga0075431_100004573 3300006847 Bacteria 13589
42 Ga0075429_100000254 3300006880 Bacteria 36852
43 Ga0075429_100010193 3300006880 Bacteria 8136
44 Ga0075436_100002351 3300006914 Bacteria 13056
45 Ga0075436_100015951 3300006914 Bacteria 5142
46 Ga0075435_100003545 3300007076 Bacteria 10598
47 Ga0075435_100052833 3300007076 Bacteria 3274
48 Ga0111539_10000330 3300009094 Bacteria 57989
49 Ga0114129_10000764 3300009147 Bacteria 41040
50 Ga0114129_10015385 3300009147 Bacteria 10887
51 Ga0114129_10041842 3300009147 Bacteria 6451
52 Ga0114129_10053699 3300009147 Bacteria 5651
53 Ga0157370_10002679 3300013104 Bacteria 21339
54 Ga0224712_10002394 3300022467 Bacteria 4618
55 Ga0207682_10004878 3300025893 Bacteria 5533
56 Ga0207705_10000001 3300025909 Bacteria 2061880
57 Ga0207684_10000002 3300025910 Bacteria 1042751
58 Ga0207684_10000109 3300025910 Bacteria 154185
59 Ga0207684_10000196 3300025910 Bacteria 95378
60 Ga0207684_10000303 3300025910 Bacteria 70047
61 Ga0207684_10000690 3300025910 Bacteria 39918
62 Ga0207684_10000767 3300025910 Bacteria 37316
63 Ga0207684_10009877 3300025910 Bacteria 8417
64 Ga0207684_10019068 3300025910 Bacteria 5868
65 Ga0207707_10019147 3300025912 Bacteria 5975
66 Ga0207646_10000045 3300025922 Bacteria 178695
67 Ga0207646_10000219 3300025922 Bacteria 78197
68 Ga0207646_10000260 3300025922 Bacteria 71868
69 Ga0207646_10000841 3300025922 Bacteria 39918
70 Ga0207646_10001052 3300025922 Bacteria 35109
71 Ga0207646_10008534 3300025922 Bacteria 10253
72 Ga0207646_10025648 3300025922 Bacteria 5390
73 Ga0207650_10010721 3300025925 Bacteria 6291
74 Ga0207659_10022834 3300025926 Bacteria 4170
75 Ga0207661_10009651 3300025944 Bacteria 6930
76 Ga0207648_10021786 3300026089 Bacteria 5757
77 Ga0207675_100015222 3300026118 Bacteria 7176
78 Ga0207428_10005205 3300027907 Bacteria 12161
79 Ga0265320_10001531 3300031240 Bacteria 16748
80 Ga0265331_10010881 3300031250 Bacteria 5003
81 Ga0265314_10016650 3300031711 Bacteria 5797
82 Ga0373943_0013700 3300035170 Bacteria 3665
83 Ga0373937_0028191 3300036401 Bacteria 5080
84 Ga0395898_0012485 3300037466 Bacteria 8782
85 Ga0495651_0005321 3300046462 Bacteria 9818
86 Ga0495653_0033685 3300046463 Bacteria 4056
87 Ga0495608_0009488 3300046511 Bacteria 6799
88 Ga0495587_0009143 3300046536 Bacteria 6356
89 Ga0495625_0001169 3300046660 Bacteria 33778
90 Ga0495588_0001505 3300046674 Bacteria 9983
91 Ga0495657_0024289 3300046675 Bacteria 4320
92 Ga0495687_000810 3300047443 Bacteria 33659
93 Ga0495675_0020679 3300047444 Bacteria 4189
94 Ga0495685_000227 3300047447 Bacteria 19254
95 Ga0496126_0001309 3300048929 Bacteria 39651
96 Ga0501031_0020901 3300049568 Bacteria 4268
97 Ga0501032_0026033 3300049569 Bacteria 4029
98 Ga0501034_0010270 3300049571 Bacteria 9766
99 Ga0501034_0043943 3300049571 Bacteria 4519
100 Ga0501036_0029984 3300049572 Bacteria 4596
101 Ga0501036_0032795 3300049572 Bacteria 4391
102 Ga0501037_0003065 3300049573 Bacteria 12113
103 Ga0501039_0011504 3300049575 Bacteria 6735
104 Ga0501039_0018728 3300049575 Bacteria 5314
105 Ga0501040_0001142 3300049576 Bacteria 16862
106 Ga0501040_0019573 3300049576 Bacteria 4504
107 Ga0501042_0011919 3300049578 Bacteria 5875
108 Ga0501043_0014877 3300049579 Bacteria 6090
109 Ga0501046_0003525 3300049580 Bacteria 14330
110 Ga0501046_0023195 3300049580 Bacteria 5108
111 Ga0501046_0026197 3300049580 Bacteria 4763
112 Ga0501047_0092605 3300049581 Bacteria 2901
113 Ga0501048_0007302 3300049582 Bacteria 8380
114 Ga0501067_0014480 3300049583 Bacteria 4367
115 Ga0501068_0001189 3300049584 Bacteria 13852
116 Ga0501068_0013226 3300049584 Bacteria 4692
117 Ga0501069_0000339 3300049585 Bacteria 21158
118 Ga0501069_0001581 3300049585 Bacteria 11254
119 Ga0501069_0011060 3300049585 Bacteria 4786
120 Ga0501070_0001430 3300049586 Bacteria 21373
121 Ga0501070_0032790 3300049586 Bacteria 4345
122 Ga0501071_0001131 3300049587 Bacteria 14907
123 Ga0501071_0015230 3300049587 Bacteria 5277
124 Ga0501072_0003974 3300049588 Bacteria 11182
125 Ga0501072_0011438 3300049588 Bacteria 6782
126 Ga0501072_0054355 3300049588 Bacteria 3154
127 Ga0501073_0019248 3300049589 Bacteria 4931
128 Ga0501075_0002503 3300049591 Bacteria 12243
129 Ga0501075_0004755 3300049591 Bacteria 9231
130 Ga0501075_0026841 3300049591 Bacteria 4242
131 Ga0501076_0004271 3300049592 Bacteria 10116
132 Ga0501076_0008342 3300049592 Bacteria 7591
133 Ga0501076_0039929 3300049592 Bacteria 3686
134 Ga0501077_0000452 3300049593 Bacteria 24888
135 Ga0501079_0009393 3300049741 Bacteria 7413
136 Ga0501080_0002329 3300049742 Bacteria 16572
137 Ga0501080_0010242 3300049742 Bacteria 8575
138 Ga0501080_0026633 3300049742 Bacteria 5372
139 Ga0501081_0004264 3300049743 Bacteria 9166
140 Ga0501083_0020956 3300049744 Bacteria 4544
141 Ga0501035_0006206 3300049822 Bacteria 11243
142 Ga0501044_0022757 3300049823 Bacteria 6673
143 Ga0501045_0004769 3300049824 Bacteria 9368
144 Ga0501045_0008868 3300049824 Bacteria 7021
145 Ga0501045_0029033 3300049824 Bacteria 3994
146 nmdc:mga05p37_17742_c1 3300050507 Bacteria 8590
147 nmdc:mga05p37_205157_c1 3300050507 Bacteria 2385
148 nmdc:mga05p37_472_c1 3300050507 Bacteria 43873
149 nmdc:mga05p37_51299_c1 3300050507 Bacteria 5073
150 nmdc:mga05p37_7257_c1 3300050507 Bacteria 13073
151 nmdc:mga09592_1031_c1 3300050508 Bacteria 22165
152 nmdc:mga09592_347_c1 3300050508 Bacteria 33931
153 nmdc:mga0qj67_277_c1 3300050509 Bacteria 35629
154 nmdc:mga06r32_6123_c1 3300050510 Bacteria 10805
155 nmdc:mga06r32_979_c1 3300050510 Bacteria 25585
156 nmdc:mga0sz30_2603_c1 3300050516 Bacteria 5635
157 Ga0495601_0000646 3300053077 Bacteria 18583
158 Ga0501084_0004322 3300054114 Bacteria 11578
159 Ga0501084_0005281 3300054114 Bacteria 10570
160 Ga0501082_0002873 3300060353 Bacteria 15009
161 Ga0501082_0022202 3300060353 Bacteria 5469
162 Ga0501082_0044400 3300060353 Bacteria 3833
163 Ga0530510_0010404 3300061734 Bacteria 6522
164 Ga0530510_0010606 3300061734 Bacteria 6461

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025926 Ga0207659_10022834 Ga0207659_100228342 772
2 3300050507 nmdc:mga05p37_205157_c1 nmdc:mga05p37_205157_c1_18_2354 773
3 3300049581 Ga0501047_0092605 Ga0501047_0092605_86_2464 788
4 3300049742 Ga0501080_0026633 Ga0501080_0026633_1670_4171 832
5 3300046660 Ga0495625_0001169 Ga0495625_0001169_4798_7449 833
6 3300047443 Ga0495687_000810 Ga0495687_000810_25935_28586 833
7 3300047447 Ga0495685_000227 Ga0495685_000227_13177_15828 833
8 3300026089 Ga0207648_10021786 Ga0207648_100217862 841
9 3300026118 Ga0207675_100015222 Ga0207675_1000152226 841
10 3300049580 Ga0501046_0003525 Ga0501046_0003525_908_3481 850
11 3300049742 Ga0501080_0010242 Ga0501080_0010242_1590_4163 850
12 3300049744 Ga0501083_0020956 Ga0501083_0020956_796_3369 850
13 3300054114 Ga0501084_0005281 Ga0501084_0005281_6436_9009 850
14 3300061734 Ga0530510_0010606 Ga0530510_0010606_126_2699 850
15 3300005354 Ga0070675_100022256 Ga0070675_1000222563 854
16 3300025925 Ga0207650_10010721 Ga0207650_100107216 854
17 3300007076 Ga0075435_100052833 Ga0075435_1000528331 855
18 3300025893 Ga0207682_10004878 Ga0207682_100048783 859
19 3300048929 Ga0496126_0001309 Ga0496126_0001309_15857_18478 859
20 3300049591 Ga0501075_0026841 Ga0501075_0026841_1045_3675 866
21 3300006028 Ga0070717_10000002 Ga0070717_10000002147 873
22 3300009147 Ga0114129_10041842 Ga0114129_100418422 874
23 3300025922 Ga0207646_10008534 Ga0207646_100085348 874
24 3300005981 Ga0081538_10003398 Ga0081538_100033982 875
25 3300025910 Ga0207684_10000196 Ga0207684_1000019665 875
26 3300025910 Ga0207684_10000767 Ga0207684_1000076715 875
27 3300025922 Ga0207646_10000260 Ga0207646_1000026042 875
28 3300046463 Ga0495653_0033685 Ga0495653_0033685_902_3613 875
29 3300005445 Ga0070708_100003606 Ga0070708_1000036067 876
30 3300005536 Ga0070697_100000270 Ga0070697_1000002706 876
31 3300009147 Ga0114129_10015385 Ga0114129_100153854 878
32 3300050507 nmdc:mga05p37_7257_c1 nmdc:mga05p37_7257_c1_5057_7795 878
33 3300022467 Ga0224712_10002394 Ga0224712_100023942 880
34 3300035170 Ga0373943_0013700 Ga0373943_0013700_350_3043 881
35 3300050507 nmdc:mga05p37_17742_c1 nmdc:mga05p37_17742_c1_5102_7969 881
36 3300005440 Ga0070705_100002050 Ga0070705_1000020505 885
37 3300005445 Ga0070708_100004450 Ga0070708_1000044502 885
38 3300005467 Ga0070706_100000828 Ga0070706_10000082814 885
39 3300005467 Ga0070706_100000902 Ga0070706_10000090224 885
40 3300005468 Ga0070707_100001662 Ga0070707_1000016624 885
41 3300005518 Ga0070699_100008105 Ga0070699_1000081054 885
42 3300005536 Ga0070697_100008709 Ga0070697_1000087096 885
43 3300006914 Ga0075436_100015951 Ga0075436_1000159513 885
44 3300025910 Ga0207684_10000109 Ga0207684_10000109103 885
45 3300025910 Ga0207684_10000303 Ga0207684_1000030347 885
46 3300025910 Ga0207684_10009877 Ga0207684_100098772 885
47 3300025922 Ga0207646_10000045 Ga0207646_10000045127 885
48 3300025922 Ga0207646_10001052 Ga0207646_1000105212 885
49 3300037466 Ga0395898_0012485 Ga0395898_0012485_1046_3772 885
50 3300005445 Ga0070708_100000260 Ga0070708_10000026019 886
51 3300005467 Ga0070706_100000663 Ga0070706_10000066319 886
52 3300005468 Ga0070707_100000479 Ga0070707_1000004799 886
53 3300005471 Ga0070698_100035696 Ga0070698_1000356964 886
54 3300005518 Ga0070699_100001375 Ga0070699_1000013757 886
55 3300005536 Ga0070697_100002982 Ga0070697_1000029824 886
56 3300025910 Ga0207684_10000690 Ga0207684_100006909 886
57 3300025922 Ga0207646_10000219 Ga0207646_1000021939 886
58 3300025922 Ga0207646_10000841 Ga0207646_100008419 886
59 3300025922 Ga0207646_10025648 Ga0207646_100256482 886
60 3300005468 Ga0070707_100006810 Ga0070707_1000068106 887
61 3300005518 Ga0070699_100001537 Ga0070699_1000015376 887
62 3300005536 Ga0070697_100007281 Ga0070697_1000072816 887
63 3300006914 Ga0075436_100002351 Ga0075436_1000023516 887
64 3300007076 Ga0075435_100003545 Ga0075435_1000035456 887
65 3300005467 Ga0070706_100011216 Ga0070706_1000112165 888
66 3300005518 Ga0070699_100001272 Ga0070699_1000012722 888
67 3300025910 Ga0207684_10000002 Ga0207684_100000021046 888
68 3300049571 Ga0501034_0043943 Ga0501034_0043943_405_3122 889
69 3300049568 Ga0501031_0020901 Ga0501031_0020901_1047_3848 890
70 3300049573 Ga0501037_0003065 Ga0501037_0003065_6717_9434 890
71 3300061734 Ga0530510_0010404 Ga0530510_0010404_254_3058 890
72 3300049580 Ga0501046_0023195 Ga0501046_0023195_2130_5039 893
73 3300049588 Ga0501072_0011438 Ga0501072_0011438_248_3157 893
74 3300049592 Ga0501076_0004271 Ga0501076_0004271_6983_9892 893
75 3300049824 Ga0501045_0004769 Ga0501045_0004769_929_3838 893
76 3300049571 Ga0501034_0010270 Ga0501034_0010270_5636_8428 895
77 3300049575 Ga0501039_0011504 Ga0501039_0011504_87_2996 897
78 3300006844 Ga0075428_100011568 Ga0075428_1000115686 899
79 3300049592 Ga0501076_0039929 Ga0501076_0039929_737_3586 901
80 3300025912 Ga0207707_10019147 Ga0207707_100191474 905
81 3300049593 Ga0501077_0000452 Ga0501077_0000452_8903_11776 905
82 3300005546 Ga0070696_100002641 Ga0070696_1000026418 906
83 3300049576 Ga0501040_0001142 Ga0501040_0001142_160_3033 906
84 3300049587 Ga0501071_0015230 Ga0501071_0015230_1450_4323 906
85 3300049591 Ga0501075_0004755 Ga0501075_0004755_451_3324 906
86 3300049741 Ga0501079_0009393 Ga0501079_0009393_4413_7286 906
87 3300054114 Ga0501084_0004322 Ga0501084_0004322_7147_10020 906
88 3300049583 Ga0501067_0014480 Ga0501067_0014480_1342_4128 907
89 3300049584 Ga0501068_0001189 Ga0501068_0001189_1331_4117 907
90 3300049584 Ga0501068_0013226 Ga0501068_0013226_1621_4407 907
91 3300049585 Ga0501069_0000339 Ga0501069_0000339_2463_5249 907
92 3300049585 Ga0501069_0001581 Ga0501069_0001581_7251_10037 907
93 3300049586 Ga0501070_0032790 Ga0501070_0032790_1313_4099 907
94 3300049587 Ga0501071_0001131 Ga0501071_0001131_1370_4156 907
95 3300049588 Ga0501072_0003974 Ga0501072_0003974_6909_9695 907
96 3300049589 Ga0501073_0019248 Ga0501073_0019248_1388_4174 907
97 3300049742 Ga0501080_0002329 Ga0501080_0002329_11507_14293 907
98 3300060353 Ga0501082_0002873 Ga0501082_0002873_689_3475 907
99 3300049569 Ga0501032_0026033 Ga0501032_0026033_1087_3921 908
100 3300049578 Ga0501042_0011919 Ga0501042_0011919_1705_4539 908
101 3300049580 Ga0501046_0026197 Ga0501046_0026197_1762_4596 908
102 3300049582 Ga0501048_0007302 Ga0501048_0007302_2377_5211 908
103 3300049585 Ga0501069_0011060 Ga0501069_0011060_53_2887 908
104 3300049586 Ga0501070_0001430 Ga0501070_0001430_3176_5986 908
105 3300049588 Ga0501072_0054355 Ga0501072_0054355_198_3032 908
106 3300049743 Ga0501081_0004264 Ga0501081_0004264_3903_6737 908
107 3300049823 Ga0501044_0022757 Ga0501044_0022757_70_2880 908
108 3300049824 Ga0501045_0029033 Ga0501045_0029033_1056_3890 908
109 3300060353 Ga0501082_0044400 Ga0501082_0044400_620_3454 908
110 3300005445 Ga0070708_100005124 Ga0070708_1000051241 909
111 3300005518 Ga0070699_100028841 Ga0070699_1000288412 910
112 3300005467 Ga0070706_100009483 Ga0070706_1000094833 912
113 3300005471 Ga0070698_100003111 Ga0070698_10000311112 912
114 3300006847 Ga0075431_100004573 Ga0075431_1000045734 912
115 3300006880 Ga0075429_100010193 Ga0075429_1000101936 912
116 3300025910 Ga0207684_10019068 Ga0207684_100190687 912
117 3300049572 Ga0501036_0029984 Ga0501036_0029984_934_3777 912
118 3300049575 Ga0501039_0018728 Ga0501039_0018728_169_3012 912
119 3300049576 Ga0501040_0019573 Ga0501040_0019573_1501_4344 912
120 3300049579 Ga0501043_0014877 Ga0501043_0014877_2697_5540 912
121 3300049591 Ga0501075_0002503 Ga0501075_0002503_7643_10486 912
122 3300049592 Ga0501076_0008342 Ga0501076_0008342_1967_4810 912
123 3300049822 Ga0501035_0006206 Ga0501035_0006206_458_3301 912
124 3300049824 Ga0501045_0008868 Ga0501045_0008868_2304_5147 912
125 3300050508 nmdc:mga09592_1031_c1 nmdc:mga09592_1031_c1_15488_18340 912
126 3300050510 nmdc:mga06r32_6123_c1 nmdc:mga06r32_6123_c1_5145_7997 912
127 3300060353 Ga0501082_0022202 Ga0501082_0022202_1923_4766 912
128 3300006844 Ga0075428_100006324 Ga0075428_1000063243 915
129 3300006846 Ga0075430_100001158 Ga0075430_10000115816 915
130 3300006847 Ga0075431_100002378 Ga0075431_10000237818 915
131 3300006880 Ga0075429_100000254 Ga0075429_1000002543 915
132 3300009147 Ga0114129_10000764 Ga0114129_100007645 915
133 3300050507 nmdc:mga05p37_472_c1 nmdc:mga05p37_472_c1_23188_26058 915
134 3300050508 nmdc:mga09592_347_c1 nmdc:mga09592_347_c1_13233_16103 915
135 3300050509 nmdc:mga0qj67_277_c1 nmdc:mga0qj67_277_c1_15882_18752 915
136 3300050510 nmdc:mga06r32_979_c1 nmdc:mga06r32_979_c1_9950_12820 915
137 3300005549 Ga0070704_100007687 Ga0070704_1000076873 916
138 3300025944 Ga0207661_10009651 Ga0207661_100096516 916
139 3300005981 Ga0081538_10000159 Ga0081538_100001595 917
140 3300036401 Ga0373937_0028191 Ga0373937_0028191_1080_3908 918
141 3300046462 Ga0495651_0005321 Ga0495651_0005321_421_3249 918
142 3300046511 Ga0495608_0009488 Ga0495608_0009488_1173_4001 918
143 3300046536 Ga0495587_0009143 Ga0495587_0009143_2933_5761 918
144 3300046675 Ga0495657_0024289 Ga0495657_0024289_16_2844 918
145 3300047444 Ga0495675_0020679 Ga0495675_0020679_1230_4058 918
146 iso_pu_bacteria 2946072368 2946078797 918
147 3300006844 Ga0075428_100029243 Ga0075428_1000292433 919
148 3300009147 Ga0114129_10053699 Ga0114129_100536994 919
149 3300050507 nmdc:mga05p37_51299_c1 nmdc:mga05p37_51299_c1_697_3576 919
150 3300005937 Ga0081455_10004300 Ga0081455_100043006 920
151 3300005981 Ga0081538_10003326 Ga0081538_1000332614 920
152 3300049572 Ga0501036_0032795 Ga0501036_0032795_1020_3845 920
153 3300053077 Ga0495601_0000646 Ga0495601_0000646_10772_13546 920
154 3300009094 Ga0111539_10000330 Ga0111539_1000033058 921
155 3300027907 Ga0207428_10005205 Ga0207428_100052053 921
156 3300046674 Ga0495588_0001505 Ga0495588_0001505_2481_5255 921
157 3300031240 Ga0265320_10001531 Ga0265320_1000153114 922
158 3300031250 Ga0265331_10010881 Ga0265331_100108812 922
159 3300031711 Ga0265314_10016650 Ga0265314_100166502 922
160 3300005336 Ga0070680_100006834 Ga0070680_1000068343 923
161 3300005458 Ga0070681_10013672 Ga0070681_100136722 923
162 3300050516 nmdc:mga0sz30_2603_c1 nmdc:mga0sz30_2603_c1_1634_4441 927
163 3300005327 Ga0070658_10000178 Ga0070658_1000017848 928
164 3300013104 Ga0157370_10002679 Ga0157370_1000267914 928
165 3300025909 Ga0207705_10000001 Ga0207705_10000001178 928

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00694

Aconitase_C

Aconitase C-terminal domain

754

884

0.97

PF00330

Aconitase

Aconitase family (aconitate hydratase)

67

626

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2b3y-assembly2.cif.gz_B structure of a monoclinic crystal form of human cytosolic aconitase (irp1) 0.9443 1 926
2b3y-assembly2.cif.gz_B structure of a monoclinic crystal form of human cytosolic aconitase (irp1) 0.9423 1 926
1c97-assembly1.cif.gz_A s642a:isocitrate complex of aconitase 0.8534 34 921
1nit-assembly1.cif.gz_A crystal structure of aconitase with trans-aconitate and nitrocitrate bound 0.8528 31 924
4kp2-assembly1.cif.gz_B-2 crystal structure of homoaconitase large subunit from methanococcus jannaschii (mj1003) 0.8489 66 601
ID Description Score Start End Superfamily
af_O53166_698_941_3.20.19.10 Alpha Beta;Alpha-Beta Barrel;Aconitase; domain 4;Aconitase, domain 4 0.9706 689 926 3.20.19.10
af_Q811J3_205_443_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.965 135 363 3.30.499.10
2b3yB02 Alpha Beta;3-Layer(aba) Sandwich;Aconitase; Domain 2;Aconitase, Domain 2 0.9633 242 365 3.40.1060.10
af_K7M629_12_200_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9532 83 282 3.30.499.10
af_A0A0N7KLZ5_21_389_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9501 1 365 3.30.499.10
ID Description Score Start End GO Terms
AF-A0A6I2XF50-F1-model_v4 deleted 0.9917 1 386
AF-A0A7V3MXG8-F1-model_v4 Aconitate hydratase (EC 4.2.1.3) 0.9916 1 294 GO:0003994
GO:0046872
GO:0051536
AF-A0A7V9TFC5-F1-model_v4 Aconitate hydratase (EC 4.2.1.3) 0.9881 1 356 GO:0003994
GO:0046872
GO:0051536
AF-A0A2S6DIU4-F1-model_v4 deleted 0.988 459 598
AF-A0A7C7QEG0-F1-model_v4 Aconitate hydratase (EC 4.2.1.3) 0.9877 1 237 GO:0003994
GO:0046872
GO:0051536

Feature Viewer

pLDDT pTM Quality
89.28 0.89 High
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Predicted Structure (AlphaFold2)

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