F245739

General Info

Members Datasets Scaffolds Average Seq Length
165 96 330 325

Family's Representative Sequence

Representative Sequence 3300005841|Ga0068863_100598269|Ga0068863_1005982691
Length 291
Sequence MISIRGLTKRFGTQTAVDDFSLEVPAGMIVGLLGPNGAGKTTTLKMLAGLLYPSKGEARVLGYVPWERDDGYRRQFALVLGQKNQLWWDLPTRESLELNAKIYGIPANLFERTVAEMSELLIVRDKLNISVRELSLGERMKMELIASLLHQPKVLFLDEPTIGLDVVSQKIVREFLRQYNERHKTTILLTSHYMADIEALCERVIIIDHGKISFDGRLSEVVDRFADFKHITIQCDGAAQCADGSLAKYGELVEKTPDTVKLKVKRDRVIPVCKALLDELPVRDIRQIFAG

Samples

Sample ID Description Type Environment
1 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
35 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
46 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
47 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
48 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
49 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
50 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
51 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
52 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
53 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
54 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
55 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
56 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
57 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
58 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
59 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
60 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
61 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
62 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
63 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
64 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
65 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
66 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
70 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
71 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
72 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
73 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
74 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
75 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
76 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
77 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
78 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
79 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
80 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
81 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
82 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
83 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
84 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
85 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
86 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
87 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
92 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
95 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
96 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.61
Rhizosphere 99.39
Stem 0
Stem Tuber 0
Unclassified 3.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068863_100598269 3300005841 Bacteria 1091
2 Ga0065712_10148162 3300005290 Bacteria 1391
3 Ga0070690_100142276 3300005330 Bacteria 1629
4 Ga0070689_100053510 3300005340 Bacteria 3124
5 Ga0070688_100036951 3300005365 Bacteria 2973
6 Ga0070714_100136538 3300005435 Bacteria 2197
7 Ga0070701_10018195 3300005438 Bacteria 3299
8 Ga0070701_10145664 3300005438 Bacteria 1359
9 Ga0070705_100029208 3300005440 Bacteria 3029
10 Ga0070705_100206322 3300005440 Bacteria 1351
11 Ga0070694_100037426 3300005444 Bacteria 3218
12 Ga0070708_100480045 3300005445 Bacteria 1173
13 Ga0070706_100276646 3300005467 Bacteria 1567
14 Ga0070704_100025983 3300005549 Bacteria 3862
15 Ga0068857_100010878 3300005577 Bacteria 7918
16 Ga0068857_100100155 3300005577 Bacteria 2599
17 Ga0068859_100137310 3300005617 Bacteria 2519
18 Ga0068859_100228621 3300005617 Bacteria 1948
19 Ga0068864_100067226 3300005618 Bacteria 3112
20 Ga0068863_100100713 3300005841 Bacteria 2746
21 Ga0068863_100126349 3300005841 Bacteria 2440
22 Ga0068863_100178193 3300005841 Bacteria 2040
23 Ga0068863_100244107 3300005841 Bacteria 1734
24 Ga0070717_10000014 3300006028 Bacteria 218451
25 Ga0075428_100002950 3300006844 Bacteria 18546
26 Ga0075428_100050703 3300006844 Bacteria 4551
27 Ga0075431_100027450 3300006847 Bacteria 5841
28 Ga0075431_100162915 3300006847 Bacteria 2293
29 Ga0075429_100118043 3300006880 Bacteria 2318
30 Ga0097620_100137312 3300006931 Bacteria 2519
31 Ga0097620_100228613 3300006931 Bacteria 1948
32 Ga0097620_100275109 3300006931 Bacteria 1776
33 Ga0075435_100016578 3300007076 Bacteria 5557
34 Ga0105240_10004960 3300009093 Bacteria 20012
35 Ga0105240_10089186 3300009093 Bacteria 3772
36 Ga0105240_10287282 3300009093 Bacteria 1887
37 Ga0105240_10610257 3300009093 Bacteria 1200
38 Ga0111539_10031550 3300009094 Bacteria 6436
39 Ga0111539_10049920 3300009094 Bacteria 4987
40 Ga0111539_10075204 3300009094 Bacteria 3980
41 Ga0111539_10130695 3300009094 Bacteria 2940
42 Ga0111539_10253982 3300009094 Bacteria 2047
43 Ga0105245_10318027 3300009098 Bacteria 1532
44 Ga0105241_10444614 3300009174 Bacteria 1146
45 Ga0105242_10112319 3300009176 Bacteria 2325
46 Ga0105242_10183295 3300009176 Bacteria 1848
47 Ga0105248_10691328 3300009177 Bacteria 1151
48 Ga0105238_10039778 3300009551 Bacteria 4768
49 Ga0105238_10168551 3300009551 Bacteria 2166
50 Ga0105249_10059811 3300009553 Bacteria 3495
51 Ga0157369_10641714 3300013105 Bacteria 1095
52 Ga0163162_10386055 3300013306 Bacteria 1533
53 Ga0157375_10000033 3300013308 Bacteria 184526
54 Ga0163163_10000146 3300014325 Bacteria 73162
55 Ga0163163_10071318 3300014325 Unclassified 3461
56 Ga0163163_10139414 3300014325 Bacteria 2467
57 Ga0157376_10079130 3300014969 Bacteria 2817
58 Ga0207699_10144688 3300025906 Bacteria 1566
59 Ga0207695_10009854 3300025913 Bacteria 11741
60 Ga0207695_10421330 3300025913 Bacteria 1219
61 Ga0207671_10009274 3300025914 Bacteria 8242
62 Ga0207646_10155228 3300025922 Bacteria 2064
63 Ga0207694_10023408 3300025924 Bacteria 4688
64 Ga0207694_10107351 3300025924 Bacteria 2218
65 Ga0207664_10118022 3300025929 Bacteria 2216
66 Ga0207670_10006626 3300025936 Bacteria 6437
67 Ga0207670_10014716 3300025936 Bacteria 4652
68 Ga0207641_10020574 3300026088 Bacteria 5421
69 Ga0207641_10147749 3300026088 Bacteria 2127
70 Ga0207641_10171216 3300026088 Bacteria 1982
71 Ga0207676_10215955 3300026095 Bacteria 1705
72 Ga0207674_10039238 3300026116 Bacteria 4910
73 Ga0207674_10186689 3300026116 Bacteria 2023
74 Ga0207428_10136947 3300027907 Bacteria 1871
75 Ga0265337_1017281 3300028556 Bacteria 2315
76 Ga0265326_10010527 3300028558 Bacteria 2742
77 Ga0265338_10000025 3300028800 Bacteria 296972
78 Ga0265338_10004977 3300028800 Bacteria 17594
79 Ga0265338_10016080 3300028800 Bacteria 8168
80 Ga0265338_10022817 3300028800 Bacteria 6459
81 Ga0265338_10024184 3300028800 Bacteria 6215
82 Ga0265338_10024842 3300028800 Bacteria 6106
83 Ga0265338_10177601 3300028800 Bacteria 1626
84 Ga0265324_10000417 3300029957 Bacteria 30508
85 Ga0265324_10016969 3300029957 Archaea 2650
86 Ga0265332_10073448 3300031238 Archaea 1455
87 Ga0265328_10020569 3300031239 Archaea 2525
88 Ga0265320_10014990 3300031240 Bacteria 4393
89 Ga0265325_10012993 3300031241 Bacteria 4749
90 Ga0265329_10002122 3300031242 Archaea 9184
91 Ga0265339_10023652 3300031249 Bacteria 3550
92 Ga0265339_10059543 3300031249 Bacteria 2059
93 Ga0265327_10004597 3300031251 Bacteria 12134
94 Ga0307408_100272919 3300031548 Bacteria 1405
95 Ga0265314_10000031 3300031711 Bacteria 265924
96 Ga0307405_10322321 3300031731 Bacteria 1181
97 Ga0307411_10188993 3300032005 Bacteria 1571
98 Ga0307415_100438431 3300032126 Bacteria 1126
99 Ga0373926_0010456 3300035083 Bacteria 3111
100 Ga0373935_0073621 3300035692 Unclassified 2207
101 Ga0373927_0023815 3300035695 Bacteria 4007
102 Ga0373947_0005770 3300035725 Bacteria 7223
103 Ga0373947_0054917 3300035725 Bacteria 2405
104 Ga0373925_0027946 3300037068 Bacteria 4130
105 Ga0395900_0223672 3300037418 Bacteria 1896
106 Ga0395905_0230136 3300037471 Bacteria 1733
107 Ga0451577_0001201 3300042876 Bacteria 36309
108 Ga0451577_0013773 3300042876 Bacteria 7557
109 Ga0451577_0314007 3300042876 Bacteria 1421
110 Ga0453683_0063563 3300044673 Bacteria 2308
111 Ga0453683_0232946 3300044673 Bacteria 1172
112 Ga0453684_0003279 3300044712 Bacteria 36918
113 Ga0453684_0003538 3300044712 Bacteria 34940
114 Ga0453684_0004525 3300044712 Bacteria 29178
115 Ga0453684_0106231 3300044712 Bacteria 3422
116 Ga0453684_0241010 3300044712 Bacteria 2082
117 Ga0451576_0024147 3300045051 Bacteria 6569
118 Ga0451576_0091357 3300045051 Bacteria 3167
119 Ga0451576_0207451 3300045051 Unclassified 2046
120 Ga0451576_0342229 3300045051 Bacteria 1566
121 Ga0451576_0419874 3300045051 Unclassified 1403
122 Ga0451576_0841612 3300045051 Bacteria 963
123 Ga0495592_0000180 3300046454 Bacteria 55455
124 Ga0495592_0023136 3300046454 Bacteria 4726
125 Ga0495592_0115788 3300046454 Bacteria 1892
126 Ga0495592_0236139 3300046454 Bacteria 1215
127 Ga0495618_0008827 3300046514 Bacteria 6087
128 Ga0495628_0000045 3300046516 Bacteria 98769
129 Ga0495628_0037745 3300046516 Bacteria 3872
130 Ga0495628_0287973 3300046516 Bacteria 1218
131 Ga0495628_0392179 3300046516 Bacteria 1015
132 Ga0495630_0022973 3300046517 Bacteria 4608
133 Ga0495630_0126674 3300046517 Unclassified 1938
134 Ga0495630_0305279 3300046517 Bacteria 1216
135 Ga0495666_0048600 3300046526 Bacteria 2043
136 Ga0495640_0039166 3300046533 Bacteria 3328
137 Ga0495640_0064712 3300046533 Bacteria 2471
138 Ga0495586_0001211 3300046535 Bacteria 14517
139 Ga0495645_0012734 3300046543 Bacteria 5935
140 Ga0495645_0025153 3300046543 Bacteria 4320
141 Ga0495599_0113195 3300046678 Bacteria 1689
142 Ga0495658_0001797 3300046683 Bacteria 11035
143 Ga0495658_0103328 3300046683 Bacteria 1704
144 Ga0495613_0140290 3300046689 Bacteria 1727
145 Ga0495674_0013269 3300047319 Bacteria 7748
146 Ga0495674_0329767 3300047319 Bacteria 1242
147 Ga0495684_0216465 3300047471 Bacteria 1406
148 Ga0496115_0003801 3300048918 Bacteria 10868
149 Ga0501031_0000093 3300049568 Bacteria 47816
150 Ga0501032_0002367 3300049569 Bacteria 14733
151 Ga0501033_0004623 3300049570 Bacteria 11023
152 Ga0501033_0075554 3300049570 Bacteria 2473
153 Ga0501034_0234141 3300049571 Bacteria 1785
154 Ga0501083_0109337 3300049744 Bacteria 1818
155 Ga0501035_0005721 3300049822 Bacteria 11723
156 Ga0501044_0002830 3300049823 Bacteria 19743
157 Ga0501044_0498030 3300049823 Bacteria 1120
158 nmdc:mga09592_80166_c1 3300050508 Bacteria 2779
159 nmdc:mga09592_93993_c1 3300050508 Bacteria 2564
160 nmdc:mga06r32_141590_c1 3300050510 Bacteria 1874
161 nmdc:mga08y16_108782_c1 3300050511 Bacteria 2886
162 nmdc:mga08y16_157358_c1 3300050511 Bacteria 2361
163 nmdc:mga08y16_204090_c1 3300050511 Bacteria 2048
164 nmdc:mga08y16_217251_c1 3300050511 Bacteria 1979
165 nmdc:mga08y16_24094_c1 3300050511 Bacteria 6426
166 Ga0068863_100598269
167 Ga0065712_10148162
168 Ga0070690_100142276
169 Ga0070689_100053510
170 Ga0070688_100036951
171 Ga0070714_100136538
172 Ga0070701_10018195
173 Ga0070701_10145664
174 Ga0070705_100029208
175 Ga0070705_100206322
176 Ga0070694_100037426
177 Ga0070708_100480045
178 Ga0070706_100276646
179 Ga0070704_100025983
180 Ga0068857_100010878
181 Ga0068857_100100155
182 Ga0068859_100137310
183 Ga0068859_100228621
184 Ga0068864_100067226
185 Ga0068863_100100713
186 Ga0068863_100126349
187 Ga0068863_100178193
188 Ga0068863_100244107
189 Ga0070717_10000014
190 Ga0075428_100002950
191 Ga0075428_100050703
192 Ga0075431_100027450
193 Ga0075431_100162915
194 Ga0075429_100118043
195 Ga0097620_100137312
196 Ga0097620_100228613
197 Ga0097620_100275109
198 Ga0075435_100016578
199 Ga0105240_10004960
200 Ga0105240_10089186
201 Ga0105240_10287282
202 Ga0105240_10610257
203 Ga0111539_10031550
204 Ga0111539_10049920
205 Ga0111539_10075204
206 Ga0111539_10130695
207 Ga0111539_10253982
208 Ga0105245_10318027
209 Ga0105241_10444614
210 Ga0105242_10112319
211 Ga0105242_10183295
212 Ga0105248_10691328
213 Ga0105238_10039778
214 Ga0105238_10168551
215 Ga0105249_10059811
216 Ga0157369_10641714
217 Ga0163162_10386055
218 Ga0157375_10000033
219 Ga0163163_10000146
220 Ga0163163_10071318
221 Ga0163163_10139414
222 Ga0157376_10079130
223 Ga0207699_10144688
224 Ga0207695_10009854
225 Ga0207695_10421330
226 Ga0207671_10009274
227 Ga0207646_10155228
228 Ga0207694_10023408
229 Ga0207694_10107351
230 Ga0207664_10118022
231 Ga0207670_10006626
232 Ga0207670_10014716
233 Ga0207641_10020574
234 Ga0207641_10147749
235 Ga0207641_10171216
236 Ga0207676_10215955
237 Ga0207674_10039238
238 Ga0207674_10186689
239 Ga0207428_10136947
240 Ga0265337_1017281
241 Ga0265326_10010527
242 Ga0265338_10000025
243 Ga0265338_10004977
244 Ga0265338_10016080
245 Ga0265338_10022817
246 Ga0265338_10024184
247 Ga0265338_10024842
248 Ga0265338_10177601
249 Ga0265324_10000417
250 Ga0265324_10016969
251 Ga0265332_10073448
252 Ga0265328_10020569
253 Ga0265320_10014990
254 Ga0265325_10012993
255 Ga0265329_10002122
256 Ga0265339_10023652
257 Ga0265339_10059543
258 Ga0265327_10004597
259 Ga0307408_100272919
260 Ga0265314_10000031
261 Ga0307405_10322321
262 Ga0307411_10188993
263 Ga0307415_100438431
264 Ga0373926_0010456
265 Ga0373935_0073621
266 Ga0373927_0023815
267 Ga0373947_0005770
268 Ga0373947_0054917
269 Ga0373925_0027946
270 Ga0395900_0223672
271 Ga0395905_0230136
272 Ga0451577_0001201
273 Ga0451577_0013773
274 Ga0451577_0314007
275 Ga0453683_0063563
276 Ga0453683_0232946
277 Ga0453684_0003279
278 Ga0453684_0003538
279 Ga0453684_0004525
280 Ga0453684_0106231
281 Ga0453684_0241010
282 Ga0451576_0024147
283 Ga0451576_0091357
284 Ga0451576_0207451
285 Ga0451576_0342229
286 Ga0451576_0419874
287 Ga0451576_0841612
288 Ga0495592_0000180
289 Ga0495592_0023136
290 Ga0495592_0115788
291 Ga0495592_0236139
292 Ga0495618_0008827
293 Ga0495628_0000045
294 Ga0495628_0037745
295 Ga0495628_0287973
296 Ga0495628_0392179
297 Ga0495630_0022973
298 Ga0495630_0126674
299 Ga0495630_0305279
300 Ga0495666_0048600
301 Ga0495640_0039166
302 Ga0495640_0064712
303 Ga0495586_0001211
304 Ga0495645_0012734
305 Ga0495645_0025153
306 Ga0495599_0113195
307 Ga0495658_0001797
308 Ga0495658_0103328
309 Ga0495613_0140290
310 Ga0495674_0013269
311 Ga0495674_0329767
312 Ga0495684_0216465
313 Ga0496115_0003801
314 Ga0501031_0000093
315 Ga0501032_0002367
316 Ga0501033_0004623
317 Ga0501033_0075554
318 Ga0501034_0234141
319 Ga0501083_0109337
320 Ga0501035_0005721
321 Ga0501044_0002830
322 Ga0501044_0498030
323 nmdc:mga09592_80166_c1
324 nmdc:mga09592_93993_c1
325 nmdc:mga06r32_141590_c1
326 nmdc:mga08y16_108782_c1
327 nmdc:mga08y16_157358_c1
328 nmdc:mga08y16_204090_c1
329 nmdc:mga08y16_217251_c1
330 nmdc:mga08y16_24094_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

17

162

0.84

PF13304

AAA_21

AAA domain, putative AbiEii toxin, Type IV TA system

65

194

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
8eop-assembly1.cif.gz_A cryo-em structure of nanodisc reconstituted human abca7 eq mutant in atp bound closed state 0.8992 2 244
6xgz-assembly4.cif.gz_G crystal structure of e. coli mlafb abc transport subunits in the monomeric state 0.891 2 248
7v8i-assembly1.cif.gz_F lolcd(e171q)e with bound amppnp in nanodiscs 0.8858 2 240
4u00-assembly1.cif.gz_A crystal structure of ttha1159 in complex with adp 0.8852 2 247
4rvc-assembly1.cif.gz_A structure of atp binding subunit of abc transporter 0.8836 3 248
ID Description Score Start End Superfamily
af_Q9XW49_1237_1482_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9336 2 247 3.40.50.300
af_A4HV32_726_961_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9324 2 247 3.40.50.300
af_A4I2P8_1496_1744_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9316 2 249 3.40.50.300
af_Q9VVK6_333_568_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9302 1 247 3.40.50.300
af_B5DDZ5_904_1157_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9276 1 247 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A353FMC3-F1-model_v4 Nitrate ABC transporter ATP-binding protein 0.9611 133 237 GO:0005524
GO:0016887
AF-A0A353FMC3-F1-model_v4 Nitrate ABC transporter ATP-binding protein 0.9437 133 237 GO:0005524
GO:0016887
AF-Q8BIR8-F1-model_v4 ABC transporter domain-containing protein 0.9422 1 246 GO:0005524
GO:0016020
GO:0016887
GO:0140359
AF-W1WLP2-F1-model_v4 ABC transporter domain-containing protein 0.9407 114 249 GO:0005524
GO:0016887
AF-A0A6M1PMP9-F1-model_v4 ABC transporter ATP-binding protein 0.9325 2 248 GO:0005524
GO:0016887

Map