F245371

General Info

Members Datasets Scaffolds Average Seq Length
165 108 165 351

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100026151|Ga0070670_1000261513
Length 338
Sequence MLYRESIFITGFPGFIASRLLEKLADPERQFFLLIQPQFVQAAMEEIEEIAEVTQTPLENYVVVEGDITLPQLGIPNEDLETIQYETTHVVNLQGTKNVNDLVVSLKNLRRYNHVSTCYVAGKREGVILESDLDHKAGFRNFYEETKYLAELEVERLKGHLPVTIFRPSVVVGDSTTGEITKYDGIYYLIHYLRKAPFLLRVINVGNSKVRLNMVPVDFVVDAIVALAHDKAAAGKTIALADPSPMTTAELFDSIAKDMTGRKSEFSPSPRLTEWFLNTGISPKVTGLPHSAVPYFFISQTYDTAVADELLKTHGIACPRFGDYVENILDFVEENPEI

Samples

Sample ID Description Type Environment
1 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
2 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
37 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
65 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
96 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
97 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
98 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
99 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
100 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
101 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
102 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
103 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
104 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
105 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
106 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
107 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
108 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.61
Nodule 0
Rhizoplane 0.61
Rhizosphere 96.36
Stem 0
Stem Tuber 0
Unclassified 2.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24748J21848_1000005 3300002074 Bacteria 228924
2 JGI24034J26672_10000003 3300002239 Bacteria 501747
3 Ga0065704_10122170 3300005289 Bacteria 1754
4 Ga0065707_10000787 3300005295 Bacteria 13141
5 Ga0065707_10144741 3300005295 Bacteria 1727
6 Ga0070658_10107938 3300005327 Bacteria 2304
7 Ga0070670_100026151 3300005331 Bacteria 5023
8 Ga0068869_100076158 3300005334 Bacteria 2494
9 Ga0070661_100068670 3300005344 Bacteria 2605
10 Ga0070661_100086839 3300005344 Unclassified 2313
11 Ga0070671_100042704 3300005355 Bacteria 3769
12 Ga0070703_10000204 3300005406 Bacteria 28691
13 Ga0070709_10158841 3300005434 Unclassified 1570
14 Ga0070705_100025714 3300005440 Unclassified 3194
15 Ga0070705_100104980 3300005440 Bacteria 1793
16 Ga0070700_100090041 3300005441 Unclassified 2000
17 Ga0070694_100016508 3300005444 Bacteria 4647
18 Ga0070694_100027970 3300005444 Bacteria 3665
19 Ga0070708_100045212 3300005445 Unclassified 3878
20 Ga0070708_100096828 3300005445 Bacteria 2696
21 Ga0070706_100079186 3300005467 Bacteria 3041
22 Ga0070706_100089697 3300005467 Bacteria 2851
23 Ga0070707_100000087 3300005468 Bacteria 82786
24 Ga0070707_100050473 3300005468 Bacteria 3988
25 Ga0070707_100117033 3300005468 Unclassified 2587
26 Ga0070707_100448279 3300005468 Unclassified 1251
27 Ga0070698_100000245 3300005471 Bacteria 54182
28 Ga0070698_100020534 3300005471 Bacteria 6925
29 Ga0070698_100068208 3300005471 Unclassified 3575
30 Ga0070699_100089730 3300005518 Unclassified 2686
31 Ga0070684_100208405 3300005535 Bacteria 1781
32 Ga0070697_100014329 3300005536 Bacteria 6229
33 Ga0070697_100143421 3300005536 Bacteria 2009
34 Ga0070672_100036208 3300005543 Bacteria 3758
35 Ga0070672_100066350 3300005543 Unclassified 2857
36 Ga0070686_100112836 3300005544 Unclassified 1854
37 Ga0070704_100000813 3300005549 Bacteria 15489
38 Ga0070664_100022070 3300005564 Bacteria 5250
39 Ga0068854_100070383 3300005578 Bacteria 2557
40 Ga0068854_100226348 3300005578 Unclassified 1482
41 Ga0068852_100096169 3300005616 Bacteria 2661
42 Ga0068859_100069316 3300005617 Bacteria 3561
43 Ga0068859_100534203 3300005617 Unclassified 1267
44 Ga0068864_100153592 3300005618 Bacteria 2087
45 Ga0068866_10000942 3300005718 Bacteria 12788
46 Ga0068870_10019860 3300005840 Bacteria 3264
47 Ga0068863_100265783 3300005841 Unclassified 1659
48 Ga0068858_100000121 3300005842 Bacteria 80770
49 Ga0068858_100026525 3300005842 Bacteria 5382
50 Ga0068858_100058132 3300005842 Bacteria 3575
51 Ga0068858_100146382 3300005842 Bacteria 2219
52 Ga0068860_100236778 3300005843 Bacteria 1775
53 Ga0081539_10062332 3300005985 Bacteria 2038
54 Ga0070715_10000004 3300006163 Bacteria 305411
55 Ga0070716_100000001 3300006173 Bacteria 400668
56 Ga0070716_100175789 3300006173 Bacteria 1401
57 Ga0097621_100202305 3300006237 Unclassified 1725
58 Ga0068871_100226231 3300006358 Bacteria 1622
59 Ga0068871_100248975 3300006358 Bacteria 1547
60 Ga0075433_10051022 3300006852 Bacteria 3601
61 Ga0075433_10333826 3300006852 Bacteria 1340
62 Ga0075434_100173649 3300006871 Bacteria 2175
63 Ga0075434_100222678 3300006871 Bacteria 1906
64 Ga0075429_100031638 3300006880 Bacteria 4598
65 Ga0075436_100000009 3300006914 Bacteria 256132
66 Ga0097620_100069323 3300006931 Bacteria 3561
67 Ga0097620_100534235 3300006931 Unclassified 1267
68 Ga0075435_100000474 3300007076 Bacteria 24396
69 Ga0099794_10041564 3300007265 Bacteria 2189
70 Ga0105245_10610474 3300009098 Unclassified 1118
71 Ga0105247_10000003 3300009101 Bacteria 694517
72 Ga0114129_10089784 3300009147 Bacteria 4259
73 Ga0105243_10000069 3300009148 Bacteria 121944
74 Ga0105243_10004645 3300009148 Bacteria 10827
75 Ga0105243_10287042 3300009148 Bacteria 1485
76 Ga0105242_10000023 3300009176 Bacteria 111152
77 Ga0105242_10001557 3300009176 Bacteria 18055
78 Ga0105248_10025196 3300009177 Bacteria 6612
79 Ga0105248_10057474 3300009177 Bacteria 4367
80 Ga0105248_10358517 3300009177 Bacteria 1641
81 Ga0105249_10000018 3300009553 Bacteria 275907
82 Ga0105249_10164422 3300009553 Bacteria 2147
83 Ga0105246_10280227 3300011119 Bacteria 1337
84 Ga0157370_10206383 3300013104 Bacteria 1822
85 Ga0157374_10168207 3300013296 Bacteria 2137
86 Ga0157378_10000007 3300013297 Bacteria 177173
87 Ga0157378_10026452 3300013297 Bacteria 5114
88 Ga0157378_10031289 3300013297 Unclassified 4701
89 Ga0157378_10040636 3300013297 Bacteria 4125
90 Ga0157378_10060028 3300013297 Bacteria 3394
91 Ga0157378_10068703 3300013297 Unclassified 3177
92 Ga0157378_10086598 3300013297 Bacteria 2840
93 Ga0163162_10000001 3300013306 Bacteria 751833
94 Ga0163162_10004518 3300013306 Bacteria 13398
95 Ga0163162_10178538 3300013306 Unclassified 2249
96 Ga0157375_10006303 3300013308 Bacteria 10335
97 Ga0157375_10183423 3300013308 Archaea 2245
98 Ga0163163_10148936 3300014325 Bacteria 2385
99 Ga0157380_10022842 3300014326 Bacteria 4716
100 Ga0157377_10241393 3300014745 Bacteria 1166
101 Ga0157379_10317764 3300014968 Bacteria 1421
102 Ga0213876_10000047 3300021384 Bacteria 146737
103 Ga0213876_10000355 3300021384 Bacteria 39376
104 Ga0207653_10000014 3300025885 Bacteria 152002
105 Ga0207642_10013098 3300025899 Bacteria 3015
106 Ga0207710_10000001 3300025900 Bacteria 1797433
107 Ga0207685_10000004 3300025905 Bacteria 305368
108 Ga0207643_10056356 3300025908 Unclassified 2235
109 Ga0207684_10031072 3300025910 Archaea 4545
110 Ga0207684_10083567 3300025910 Bacteria 2719
111 Ga0207684_10098691 3300025910 Bacteria 2494
112 Ga0207662_10047044 3300025918 Bacteria 2554
113 Ga0207662_10120579 3300025918 Bacteria 1645
114 Ga0207646_10001821 3300025922 Bacteria 25747
115 Ga0207646_10011913 3300025922 Bacteria 8387
116 Ga0207646_10027186 3300025922 Bacteria 5218
117 Ga0207646_10102516 3300025922 Bacteria 2566
118 Ga0207650_10016336 3300025925 Bacteria 5188
119 Ga0207650_10291826 3300025925 Bacteria 1330
120 Ga0207644_10003150 3300025931 Bacteria 10623
121 Ga0207686_10000025 3300025934 Bacteria 169534
122 Ga0207686_10000444 3300025934 Bacteria 27647
123 Ga0207709_10000024 3300025935 Bacteria 369177
124 Ga0207709_10002738 3300025935 Bacteria 10873
125 Ga0207665_10000002 3300025939 Bacteria 267895
126 Ga0207665_10021009 3300025939 Bacteria 4290
127 Ga0207665_10190316 3300025939 Bacteria 1490
128 Ga0207691_10081085 3300025940 Unclassified 2917
129 Ga0207711_10118684 3300025941 Unclassified 2360
130 Ga0207689_10041571 3300025942 Bacteria 3804
131 Ga0207679_10426293 3300025945 Bacteria 1172
132 Ga0207712_10000081 3300025961 Bacteria 114043
133 Ga0207712_10180252 3300025961 Bacteria 1659
134 Ga0207703_10000200 3300026035 Bacteria 69944
135 Ga0207703_10008319 3300026035 Bacteria 8197
136 Ga0207703_10132806 3300026035 Bacteria 2152
137 Ga0207708_10104297 3300026075 Unclassified 2197
138 Ga0207648_10153205 3300026089 Bacteria 2034
139 Ga0207676_10133833 3300026095 Bacteria 2112
140 Ga0207698_10108748 3300026142 Bacteria 2318
141 Ga0268265_10170228 3300028380 Bacteria 1861
142 Ga0268264_10101234 3300028381 Bacteria 2504
143 Ga0268264_10208399 3300028381 Bacteria 1793
144 Ga0307408_100241804 3300031548 Bacteria 1484
145 Ga0307406_10022704 3300031901 Bacteria 3725
146 Ga0307409_100027536 3300031995 Bacteria 4030
147 Ga0395905_0008240 3300037471 Bacteria 10293
148 Ga0436365_0378929 3300039437 Bacteria 49081
149 Ga0436365_0758244 3300039437 Bacteria 69078
150 Ga0451576_0081582 3300045051 Bacteria 3363
151 Ga0495621_0022919 3300046539 Bacteria 2074
152 Ga0495635_0174265 3300046663 Bacteria 1463
153 Ga0496106_0018373 3300048909 Bacteria 5167
154 Ga0501075_0262309 3300049591 Bacteria 1317
155 nmdc:mga05p37_92808_c1 3300050507 Bacteria 3720
156 nmdc:mga09592_15168_c1 3300050508 Bacteria 6295
157 nmdc:mga08y16_326650_c1 3300050511 Bacteria 1579
158 nmdc:mga0n895_17199_c1 3300050512 Bacteria 6663
159 nmdc:mga0n895_420147_c1 3300050512 Bacteria 1351
160 nmdc:mga0rr50_344_c1 3300050513 Bacteria 25343
161 nmdc:mga08x19_31_c1 3300050514 Bacteria 209591
162 nmdc:mga0a205_79832_c1 3300050515 Bacteria 3162
163 nmdc:mga0a205_9474_c1 3300050515 Bacteria 8907
164 Ga0495655_0009708 3300053083 Unclassified 1875
165 Ga0500616_0001936 3300053153 Bacteria 18472

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005444 Ga0070694_100016508 Ga0070694_1000165082 316
2 3300006871 Ga0075434_100173649 Ga0075434_1001736493 330
3 3300005468 Ga0070707_100050473 Ga0070707_1000504732 331
4 3300005841 Ga0068863_100265783 Ga0068863_1002657832 331
5 3300005842 Ga0068858_100026525 Ga0068858_1000265252 331
6 3300009098 Ga0105245_10610474 Ga0105245_106104741 331
7 3300009176 Ga0105242_10001557 Ga0105242_100015573 331
8 3300009177 Ga0105248_10057474 Ga0105248_100574742 331
9 3300011119 Ga0105246_10280227 Ga0105246_102802272 331
10 3300013297 Ga0157378_10060028 Ga0157378_100600282 331
11 3300014968 Ga0157379_10317764 Ga0157379_103177641 331
12 3300025918 Ga0207662_10120579 Ga0207662_101205792 331
13 3300025922 Ga0207646_10027186 Ga0207646_100271862 331
14 3300025934 Ga0207686_10000444 Ga0207686_100004447 331
15 3300026035 Ga0207703_10008319 Ga0207703_100083196 331
16 3300046663 Ga0495635_0174265 Ga0495635_0174265_228_1298 332
17 3300005518 Ga0070699_100089730 Ga0070699_1000897302 334
18 3300006173 Ga0070716_100175789 Ga0070716_1001757891 334
19 3300009148 Ga0105243_10287042 Ga0105243_102870421 334
20 3300009177 Ga0105248_10358517 Ga0105248_103585171 334
21 3300025939 Ga0207665_10190316 Ga0207665_101903161 334
22 3300005467 Ga0070706_100079186 Ga0070706_1000791864 335
23 3300005471 Ga0070698_100000245 Ga0070698_1000002455 335
24 3300005471 Ga0070698_100068208 Ga0070698_1000682082 335
25 3300025910 Ga0207684_10098691 Ga0207684_100986912 335
26 3300025922 Ga0207646_10011913 Ga0207646_100119135 335
27 3300013308 Ga0157375_10183423 Ga0157375_101834232 337
28 3300046539 Ga0495621_0022919 Ga0495621_0022919_933_2012 337
29 3300005331 Ga0070670_100026151 Ga0070670_1000261513 338
30 3300005543 Ga0070672_100066350 Ga0070672_1000663503 338
31 3300005564 Ga0070664_100022070 Ga0070664_1000220703 338
32 3300005840 Ga0068870_10019860 Ga0068870_100198602 338
33 3300006237 Ga0097621_100202305 Ga0097621_1002023051 338
34 3300006358 Ga0068871_100226231 Ga0068871_1002262312 338
35 3300025908 Ga0207643_10056356 Ga0207643_100563562 338
36 3300025925 Ga0207650_10016336 Ga0207650_100163364 338
37 3300025940 Ga0207691_10081085 Ga0207691_100810852 338
38 3300026089 Ga0207648_10153205 Ga0207648_101532053 338
39 3300005434 Ga0070709_10158841 Ga0070709_101588412 340
40 3300005440 Ga0070705_100025714 Ga0070705_1000257142 340
41 3300005536 Ga0070697_100143421 Ga0070697_1001434212 343
42 3300006871 Ga0075434_100222678 Ga0075434_1002226781 343
43 3300013297 Ga0157378_10031289 Ga0157378_100312896 343
44 3300014326 Ga0157380_10022842 Ga0157380_100228421 343
45 3300050512 nmdc:mga0n895_17199_c1 nmdc:mga0n895_17199_c1_5431_6501 343
46 3300005445 Ga0070708_100096828 Ga0070708_1000968282 344
47 3300013297 Ga0157378_10068703 Ga0157378_100687032 345
48 3300005327 Ga0070658_10107938 Ga0070658_101079382 348
49 3300005355 Ga0070671_100042704 Ga0070671_1000427042 348
50 3300009148 Ga0105243_10004645 Ga0105243_100046455 354
51 3300013297 Ga0157378_10000007 Ga0157378_1000000727 354
52 3300013308 Ga0157375_10006303 Ga0157375_100063035 354
53 3300048909 Ga0496106_0018373 Ga0496106_0018373_2925_3989 354
54 3300049591 Ga0501075_0262309 Ga0501075_0262309_237_1307 354
55 3300002074 JGI24748J21848_1000005 JGI24748J21848_100000539 356
56 3300002239 JGI24034J26672_10000003 JGI24034J26672_1000000339 356
57 3300005289 Ga0065704_10122170 Ga0065704_101221703 356
58 3300005295 Ga0065707_10000787 Ga0065707_100007872 356
59 3300005295 Ga0065707_10144741 Ga0065707_101447412 356
60 3300005334 Ga0068869_100076158 Ga0068869_1000761581 356
61 3300005344 Ga0070661_100068670 Ga0070661_1000686703 356
62 3300005344 Ga0070661_100086839 Ga0070661_1000868392 356
63 3300005406 Ga0070703_10000204 Ga0070703_100002043 356
64 3300005440 Ga0070705_100104980 Ga0070705_1001049802 356
65 3300005441 Ga0070700_100090041 Ga0070700_1000900412 356
66 3300005444 Ga0070694_100027970 Ga0070694_1000279702 356
67 3300005445 Ga0070708_100045212 Ga0070708_1000452124 356
68 3300005467 Ga0070706_100089697 Ga0070706_1000896974 356
69 3300005468 Ga0070707_100000087 Ga0070707_10000008754 356
70 3300005468 Ga0070707_100117033 Ga0070707_1001170332 356
71 3300005468 Ga0070707_100448279 Ga0070707_1004482791 356
72 3300005471 Ga0070698_100020534 Ga0070698_1000205344 356
73 3300005535 Ga0070684_100208405 Ga0070684_1002084052 356
74 3300005536 Ga0070697_100014329 Ga0070697_1000143295 356
75 3300005543 Ga0070672_100036208 Ga0070672_1000362083 356
76 3300005544 Ga0070686_100112836 Ga0070686_1001128361 356
77 3300005549 Ga0070704_100000813 Ga0070704_10000081313 356
78 3300005578 Ga0068854_100070383 Ga0068854_1000703833 356
79 3300005578 Ga0068854_100226348 Ga0068854_1002263481 356
80 3300005616 Ga0068852_100096169 Ga0068852_1000961692 356
81 3300005617 Ga0068859_100069316 Ga0068859_1000693162 356
82 3300005617 Ga0068859_100534203 Ga0068859_1005342031 356
83 3300005618 Ga0068864_100153592 Ga0068864_1001535922 356
84 3300005718 Ga0068866_10000942 Ga0068866_100009426 356
85 3300005842 Ga0068858_100000121 Ga0068858_10000012114 356
86 3300005842 Ga0068858_100058132 Ga0068858_1000581322 356
87 3300005842 Ga0068858_100146382 Ga0068858_1001463823 356
88 3300005843 Ga0068860_100236778 Ga0068860_1002367781 356
89 3300005985 Ga0081539_10062332 Ga0081539_100623322 356
90 3300006163 Ga0070715_10000004 Ga0070715_10000004167 356
91 3300006173 Ga0070716_100000001 Ga0070716_100000001163 356
92 3300006358 Ga0068871_100248975 Ga0068871_1002489752 356
93 3300006852 Ga0075433_10051022 Ga0075433_100510223 356
94 3300006852 Ga0075433_10333826 Ga0075433_103338261 356
95 3300006880 Ga0075429_100031638 Ga0075429_1000316383 356
96 3300006914 Ga0075436_100000009 Ga0075436_100000009134 356
97 3300006931 Ga0097620_100069323 Ga0097620_1000693236 356
98 3300006931 Ga0097620_100534235 Ga0097620_1005342351 356
99 3300007076 Ga0075435_100000474 Ga0075435_1000004745 356
100 3300007265 Ga0099794_10041564 Ga0099794_100415642 356
101 3300009101 Ga0105247_10000003 Ga0105247_1000000338 356
102 3300009147 Ga0114129_10089784 Ga0114129_100897843 356
103 3300009148 Ga0105243_10000069 Ga0105243_1000006923 356
104 3300009176 Ga0105242_10000023 Ga0105242_1000002311 356
105 3300009177 Ga0105248_10025196 Ga0105248_100251965 356
106 3300009553 Ga0105249_10000018 Ga0105249_10000018177 356
107 3300009553 Ga0105249_10164422 Ga0105249_101644222 356
108 3300013104 Ga0157370_10206383 Ga0157370_102063832 356
109 3300013296 Ga0157374_10168207 Ga0157374_101682072 356
110 3300013297 Ga0157378_10026452 Ga0157378_100264523 356
111 3300013297 Ga0157378_10040636 Ga0157378_100406362 356
112 3300013297 Ga0157378_10086598 Ga0157378_100865982 356
113 3300013306 Ga0163162_10000001 Ga0163162_10000001211 356
114 3300013306 Ga0163162_10004518 Ga0163162_100045183 356
115 3300013306 Ga0163162_10178538 Ga0163162_101785382 356
116 3300014325 Ga0163163_10148936 Ga0163163_101489361 356
117 3300014745 Ga0157377_10241393 Ga0157377_102413931 356
118 3300021384 Ga0213876_10000047 Ga0213876_1000004725 356
119 3300021384 Ga0213876_10000355 Ga0213876_1000035523 356
120 3300025885 Ga0207653_10000014 Ga0207653_1000001496 356
121 3300025899 Ga0207642_10013098 Ga0207642_100130982 356
122 3300025900 Ga0207710_10000001 Ga0207710_100000011270 356
123 3300025905 Ga0207685_10000004 Ga0207685_1000000488 356
124 3300025910 Ga0207684_10031072 Ga0207684_100310723 356
125 3300025910 Ga0207684_10083567 Ga0207684_100835673 356
126 3300025918 Ga0207662_10047044 Ga0207662_100470441 356
127 3300025922 Ga0207646_10001821 Ga0207646_1000182111 356
128 3300025922 Ga0207646_10102516 Ga0207646_101025162 356
129 3300025925 Ga0207650_10291826 Ga0207650_102918261 356
130 3300025931 Ga0207644_10003150 Ga0207644_100031506 356
131 3300025934 Ga0207686_10000025 Ga0207686_1000002569 356
132 3300025935 Ga0207709_10000024 Ga0207709_1000002464 356
133 3300025935 Ga0207709_10002738 Ga0207709_100027385 356
134 3300025939 Ga0207665_10000002 Ga0207665_1000000242 356
135 3300025939 Ga0207665_10021009 Ga0207665_100210095 356
136 3300025941 Ga0207711_10118684 Ga0207711_101186842 356
137 3300025942 Ga0207689_10041571 Ga0207689_100415713 356
138 3300025945 Ga0207679_10426293 Ga0207679_104262931 356
139 3300025961 Ga0207712_10000081 Ga0207712_1000008161 356
140 3300025961 Ga0207712_10180252 Ga0207712_101802521 356
141 3300026035 Ga0207703_10000200 Ga0207703_1000020014 356
142 3300026035 Ga0207703_10132806 Ga0207703_101328062 356
143 3300026075 Ga0207708_10104297 Ga0207708_101042972 356
144 3300026095 Ga0207676_10133833 Ga0207676_101338331 356
145 3300026142 Ga0207698_10108748 Ga0207698_101087483 356
146 3300028380 Ga0268265_10170228 Ga0268265_101702281 356
147 3300028381 Ga0268264_10101234 Ga0268264_101012341 356
148 3300028381 Ga0268264_10208399 Ga0268264_102083992 356
149 3300031548 Ga0307408_100241804 Ga0307408_1002418041 356
150 3300031901 Ga0307406_10022704 Ga0307406_100227043 356
151 3300031995 Ga0307409_100027536 Ga0307409_1000275364 356
152 3300037471 Ga0395905_0008240 Ga0395905_0008240_2764_3834 356
153 3300039437 Ga0436365_0378929 Ga0436365_0378929_31142_32215 356
154 3300039437 Ga0436365_0758244 Ga0436365_0758244_30435_31505 356
155 3300045051 Ga0451576_0081582 Ga0451576_0081582_1525_2595 356
156 3300050507 nmdc:mga05p37_92808_c1 nmdc:mga05p37_92808_c1_353_1423 356
157 3300050508 nmdc:mga09592_15168_c1 nmdc:mga09592_15168_c1_3143_4213 356
158 3300050511 nmdc:mga08y16_326650_c1 nmdc:mga08y16_326650_c1_217_1287 356
159 3300050512 nmdc:mga0n895_420147_c1 nmdc:mga0n895_420147_c1_212_1282 356
160 3300050513 nmdc:mga0rr50_344_c1 nmdc:mga0rr50_344_c1_15351_16421 356
161 3300050514 nmdc:mga08x19_31_c1 nmdc:mga08x19_31_c1_85668_86738 356
162 3300050515 nmdc:mga0a205_79832_c1 nmdc:mga0a205_79832_c1_421_1491 356
163 3300050515 nmdc:mga0a205_9474_c1 nmdc:mga0a205_9474_c1_275_1345 356
164 3300053083 Ga0495655_0009708 Ga0495655_0009708_381_1454 356
165 3300053153 Ga0500616_0001936 Ga0500616_0001936_8142_9212 356

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07993

NAD_binding_4

Male sterility protein

9

93

0.87

PF07993

NAD_binding_4

Male sterility protein

83

224

0.86

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

7

241

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4w4t-assembly1.cif.gz_B the crystal structure of the terminal r domain from the myxalamid pks-nrps biosynthetic pathway 0.8299 1 356
4w4t-assembly1.cif.gz_B the crystal structure of the terminal r domain from the myxalamid pks-nrps biosynthetic pathway 0.8277 1 356
4u7w-assembly1.cif.gz_A the crystal structure of the terminal r domain from the myxalamid pks-nrps biosynthetic pathway 0.8162 1 353
4w4t-assembly1.cif.gz_A the crystal structure of the terminal r domain from the myxalamid pks-nrps biosynthetic pathway 0.8102 1 353
4u7w-assembly1.cif.gz_A the crystal structure of the terminal r domain from the myxalamid pks-nrps biosynthetic pathway 0.8084 1 353
ID Description Score Start End Superfamily
af_A0A0N7KNG3_11_267_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8728 3 188 3.40.50.720
af_O50417_1_339_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8646 6 353 3.40.50.720
af_O50417_1_339_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8574 6 353 3.40.50.720
af_A0A0P0W8X9_2_169_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8528 5 132 3.40.50.720
af_Q9LXN3_7_372_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8324 3 274 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6A2FDW9-F1-model_v4 deleted 0.9643 4 128
AF-A0A7V9UVI0-F1-model_v4 SDR family oxidoreductase 0.9593 1 146 GO:0035336
GO:0043231
GO:0080019
AF-A0A2V8SHN5-F1-model_v4 Thioester reductase (TE) domain-containing protein 0.9543 152 356
AF-A0A7V9UVI0-F1-model_v4 SDR family oxidoreductase 0.9529 1 146 GO:0035336
GO:0043231
GO:0080019
AF-A0A0D0QXY7-F1-model_v4 Mercuric reductase (EC 1.16.1.1) 0.9525 3 206 GO:0003955
GO:0016152
GO:0050660

Feature Viewer

pLDDT pTM Quality
90.85 0.9 High
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Predicted Structure (AlphaFold2)

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