F244363

General Info

Members Datasets Scaffolds Average Seq Length
164 113 328 589

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0027594|Ga0436364_0027594_191_2032
Length 613
Sequence MTQLGITLIVIYFLIMLALTKPVGLFMARVFDGERTFLHPVVRPLERFIYKLSGVREDVEQRWTQYTASLLAFSLISFAFVYLIQRLQGFLPLNPQGFSTAHAASGATAMTPDLAFNTAISFVTNTNWQAYSGEATLSYFVQMAALAVQNFASAAAGIAVAIALVRGFARQQVNTIGNFWVDVTRATLYILVPLSLVGAIFLCSQGVVQNFRPYDKVQTVEGATQVIAQGPIASQEAIKMIGTNGGGFLNANSAHPFENPTPLSNFVQMLMIFIIPAGLTYTFGYMVGDTRQGWAIFAACSVMFLAGAMIAYSAESRGNPLLHSSGIQMAGGNMEGKETRFGIASSALFATITTDASCGAVNSMHDSFTPLGGLVPLFNIETGEVIFGGTGAGLYGILLYAILAVFIAGLMVGRTPEYLGKKIEGKEVKMAMLALLSTAASILVLSAITSVVPLDWDKTQYLNPAAGTPKPAPTASVAPTANLNNGGPHGFSEILYAYTSVTGNNGSAFAGISVDTPWYNATLGLAMWIGRFFFLIPLLAAAGSLAVKKKIPATAGTFPTHGPLFVGLLVGTVFLVGALTFFPALSLGPIVEHFLMDQGKLFSFIFPLSGIVS

Samples

Sample ID Description Type Environment
1 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
70 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
71 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
72 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
73 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
80 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
81 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
82 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
83 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
84 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
85 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
86 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
87 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
88 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
89 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
97 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
98 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
99 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
100 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
101 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
102 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
103 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
104 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
105 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
108 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
109 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
110 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
111 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
112 2643221564 Mesorhizobium sp. Root157 Isolate Unclassified
113 2643221733 Bosea sp. Root381 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.78
Metatranscriptomes 0
Isolates 1.22

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.61
Nodule 0
Rhizoplane 0.61
Rhizosphere 89.02
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436364_0027594 3300037853 Bacteria 4068
2 Ga0065712_10068409 3300005290 Bacteria 10860
3 Ga0070683_100000007 3300005329 Bacteria 342155
4 Ga0068869_100007767 3300005334 Bacteria 6880
5 Ga0068868_100040083 3300005338 Bacteria 3644
6 Ga0070660_100006227 3300005339 Bacteria 8261
7 Ga0070689_100022425 3300005340 Bacteria 4714
8 Ga0070661_100016072 3300005344 Bacteria 5282
9 Ga0070675_100077609 3300005354 Bacteria 2765
10 Ga0070673_100005183 3300005364 Bacteria 8324
11 Ga0070673_100086623 3300005364 Bacteria 2552
12 Ga0070688_100050884 3300005365 Bacteria 2582
13 Ga0070708_100009650 3300005445 Bacteria 7786
14 Ga0070681_10002256 3300005458 Bacteria 17604
15 Ga0070681_10030882 3300005458 Bacteria 5377
16 Ga0070684_100000021 3300005535 Bacteria 132928
17 Ga0068853_100007562 3300005539 Bacteria 8700
18 Ga0070696_100004590 3300005546 Bacteria 9224
19 Ga0070665_100018150 3300005548 Bacteria 7059
20 Ga0070665_100152645 3300005548 Bacteria 2312
21 Ga0068855_100004914 3300005563 Bacteria 16315
22 Ga0068855_100006251 3300005563 Bacteria 14522
23 Ga0068855_100016988 3300005563 Bacteria 8752
24 Ga0068855_100030113 3300005563 Bacteria 6491
25 Ga0068855_100084274 3300005563 Bacteria 3681
26 Ga0070664_100105880 3300005564 Bacteria 2450
27 Ga0068856_100006050 3300005614 Bacteria 11891
28 Ga0068859_100042843 3300005617 Bacteria 4548
29 Ga0068864_100084808 3300005618 Bacteria 2784
30 Ga0068858_100000470 3300005842 Bacteria 42012
31 Ga0068858_100010327 3300005842 Bacteria 8848
32 Ga0068858_100056328 3300005842 Bacteria 3634
33 Ga0081539_10052194 3300005985 Bacteria 2298
34 Ga0070717_10009876 3300006028 Bacteria 7187
35 Ga0097621_100027819 3300006237 Bacteria 4451
36 Ga0097621_100129129 3300006237 Bacteria 2150
37 Ga0068871_100017147 3300006358 Bacteria 5473
38 Ga0075431_100004860 3300006847 Bacteria 13232
39 Ga0075431_100005887 3300006847 Bacteria 12132
40 Ga0075431_100160197 3300006847 Bacteria 2314
41 Ga0068865_100007586 3300006881 Bacteria 6677
42 Ga0097620_100042843 3300006931 Bacteria 4548
43 Ga0105240_10007050 3300009093 Bacteria 16388
44 Ga0105245_10000422 3300009098 Bacteria 39398
45 Ga0105245_10005472 3300009098 Bacteria 11157
46 Ga0105245_10025915 3300009098 Bacteria 5157
47 Ga0105247_10024239 3300009101 Bacteria 3655
48 Ga0114129_10057729 3300009147 Bacteria 5430
49 Ga0114129_10151835 3300009147 Bacteria 3170
50 Ga0105241_10051851 3300009174 Bacteria 3130
51 Ga0105242_10023092 3300009176 Bacteria 4902
52 Ga0105242_10108980 3300009176 Bacteria 2357
53 Ga0105248_10005934 3300009177 Bacteria 13425
54 Ga0105248_10180762 3300009177 Bacteria 2377
55 Ga0105237_10011523 3300009545 Bacteria 9354
56 Ga0105249_10127747 3300009553 Bacteria 2423
57 Ga0157370_10002071 3300013104 Bacteria 24560
58 Ga0157370_10022126 3300013104 Bacteria 6328
59 Ga0157369_10002856 3300013105 Bacteria 20635
60 Ga0157369_10022961 3300013105 Bacteria 6957
61 Ga0157369_10116198 3300013105 Bacteria 2841
62 Ga0157374_10007447 3300013296 Bacteria 9337
63 Ga0157378_10020596 3300013297 Bacteria 5800
64 Ga0163162_10040187 3300013306 Bacteria 4677
65 Ga0157372_10198684 3300013307 Bacteria 2322
66 Ga0157375_10004021 3300013308 Bacteria 12757
67 Ga0163163_10055607 3300014325 Bacteria 3912
68 Ga0213875_10000006 3300021388 Bacteria 579005
69 Ga0213875_10000010 3300021388 Bacteria 370268
70 Ga0213875_10001815 3300021388 Bacteria 13281
71 Ga0213875_10002457 3300021388 Bacteria 11065
72 Ga0213875_10016075 3300021388 Bacteria 3630
73 Ga0207707_10002870 3300025912 Bacteria 15399
74 Ga0207695_10005503 3300025913 Bacteria 16765
75 Ga0207695_10006212 3300025913 Bacteria 15559
76 Ga0207657_10007196 3300025919 Bacteria 11424
77 Ga0207657_10152585 3300025919 Bacteria 1880
78 Ga0207694_10103657 3300025924 Bacteria 2256
79 Ga0207659_10057525 3300025926 Bacteria 2788
80 Ga0207687_10001145 3300025927 Bacteria 18047
81 Ga0207687_10013704 3300025927 Bacteria 5293
82 Ga0207687_10051462 3300025927 Bacteria 2871
83 Ga0207686_10052574 3300025934 Bacteria 2543
84 Ga0207670_10000369 3300025936 Bacteria 26038
85 Ga0207704_10018020 3300025938 Bacteria 3676
86 Ga0207711_10002964 3300025941 Bacteria 14832
87 Ga0207711_10114898 3300025941 Bacteria 2398
88 Ga0207661_10000010 3300025944 Bacteria 375338
89 Ga0207667_10010701 3300025949 Bacteria 10703
90 Ga0207667_10041496 3300025949 Bacteria 4894
91 Ga0207667_10115221 3300025949 Bacteria 2770
92 Ga0207667_10141403 3300025949 Bacteria 2478
93 Ga0207651_10065087 3300025960 Bacteria 2555
94 Ga0207703_10000041 3300026035 Bacteria 164313
95 Ga0207703_10010834 3300026035 Bacteria 7111
96 Ga0207703_10022959 3300026035 Bacteria 4898
97 Ga0207703_10046424 3300026035 Bacteria 3498
98 Ga0207639_10007856 3300026041 Bacteria 7287
99 Ga0207678_10004304 3300026067 Bacteria 12770
100 Ga0207702_10026891 3300026078 Bacteria 4777
101 Ga0207702_10043006 3300026078 Bacteria 3791
102 Ga0268266_10122358 3300028379 Bacteria 2317
103 Ga0265313_10015064 3300031595 Bacteria 4532
104 Ga0265314_10002183 3300031711 Bacteria 20454
105 Ga0265314_10009181 3300031711 Bacteria 8387
106 Ga0373926_0017206 3300035083 Bacteria 2480
107 Ga0373934_0021889 3300035086 Bacteria 2464
108 Ga0373956_0007838 3300035119 Bacteria 4309
109 Ga0373943_0033737 3300035170 Bacteria 2440
110 Ga0373935_0060912 3300035692 Bacteria 2415
111 Ga0373927_0002415 3300035695 Bacteria 13614
112 Ga0373927_0008481 3300035695 Bacteria 6915
113 Ga0373927_0023094 3300035695 Bacteria 4074
114 Ga0373933_0001634 3300035724 Bacteria 13060
115 Ga0373937_0022753 3300036401 Bacteria 5638
116 Ga0373925_0051868 3300037068 Bacteria 3063
117 Ga0436364_0149819 3300037853 Bacteria 9375
118 Ga0436364_0202263 3300037853 Bacteria 63132
119 Ga0436364_0478514 3300037853 Bacteria 578677
120 Ga0436364_0638821 3300037853 Bacteria 4141
121 Ga0436364_1067059 3300037853 Bacteria 2839
122 Ga0436364_1217214 3300037853 Bacteria 5584
123 Ga0436364_1343448 3300037853 Bacteria 154245
124 Ga0436365_0826975 3300039437 Bacteria 8239
125 Ga0436360_0195779 3300039438 Bacteria 8283
126 Ga0436361_0161441 3300039447 Bacteria 7047
127 Ga0436361_0619131 3300039447 Bacteria 36149
128 Ga0466967_0110496 3300045976 Bacteria 2525
129 Ga0495580_0030708 3300046472 Bacteria 3888
130 Ga0495580_0031419 3300046472 Bacteria 3837
131 Ga0495580_0044018 3300046472 Bacteria 3176
132 Ga0495580_0064780 3300046472 Bacteria 2561
133 Ga0495594_0065096 3300046499 Bacteria 2022
134 Ga0495587_0000955 3300046536 Bacteria 18977
135 Ga0495645_0030773 3300046543 Bacteria 3911
136 Ga0495599_0000664 3300046678 Bacteria 19459
137 Ga0495602_0001157 3300048088 Bacteria 25828
138 Ga0496115_0111144 3300048918 Bacteria 2251
139 Ga0501033_0048729 3300049570 Bacteria 3146
140 Ga0501034_0026159 3300049571 Bacteria 5941
141 Ga0501036_0000271 3300049572 Bacteria 35394
142 Ga0501037_0030989 3300049573 Bacteria 3949
143 Ga0501039_0064033 3300049575 Bacteria 2849
144 Ga0501046_0000010 3300049580 Bacteria 331082
145 Ga0501046_0001715 3300049580 Bacteria 20916
146 Ga0501047_0034292 3300049581 Bacteria 4900
147 Ga0501067_0004113 3300049583 Bacteria 8020
148 Ga0501068_0000546 3300049584 Bacteria 19075
149 Ga0501069_0000350 3300049585 Bacteria 20758
150 Ga0501070_0021388 3300049586 Bacteria 5426
151 Ga0501073_0000765 3300049589 Bacteria 22825
152 Ga0501074_0013068 3300049590 Bacteria 6035
153 Ga0501077_0010709 3300049593 Bacteria 5710
154 Ga0501079_0018477 3300049741 Bacteria 5326
155 Ga0501080_0005676 3300049742 Bacteria 11156
156 Ga0501083_0038860 3300049744 Bacteria 3233
157 Ga0501044_0012306 3300049823 Bacteria 9264
158 nmdc:mga05p37_18348_c1 3300050507 Bacteria 8449
159 nmdc:mga06r32_10715_c1 3300050510 Bacteria 8260
160 Ga0500568_0005397 3300053139 Bacteria 6611
161 Ga0501084_0003967 3300054114 Bacteria 12052
162 Ga0501082_0027385 3300060353 Bacteria 4906
163 2643839577 2643221564 Bacteria 4193379
164 2644730782 2643221733 Bacteria 5690728
165 Ga0436364_0027594
166 Ga0065712_10068409
167 Ga0070683_100000007
168 Ga0068869_100007767
169 Ga0068868_100040083
170 Ga0070660_100006227
171 Ga0070689_100022425
172 Ga0070661_100016072
173 Ga0070675_100077609
174 Ga0070673_100005183
175 Ga0070673_100086623
176 Ga0070688_100050884
177 Ga0070708_100009650
178 Ga0070681_10002256
179 Ga0070681_10030882
180 Ga0070684_100000021
181 Ga0068853_100007562
182 Ga0070696_100004590
183 Ga0070665_100018150
184 Ga0070665_100152645
185 Ga0068855_100004914
186 Ga0068855_100006251
187 Ga0068855_100016988
188 Ga0068855_100030113
189 Ga0068855_100084274
190 Ga0070664_100105880
191 Ga0068856_100006050
192 Ga0068859_100042843
193 Ga0068864_100084808
194 Ga0068858_100000470
195 Ga0068858_100010327
196 Ga0068858_100056328
197 Ga0081539_10052194
198 Ga0070717_10009876
199 Ga0097621_100027819
200 Ga0097621_100129129
201 Ga0068871_100017147
202 Ga0075431_100004860
203 Ga0075431_100005887
204 Ga0075431_100160197
205 Ga0068865_100007586
206 Ga0097620_100042843
207 Ga0105240_10007050
208 Ga0105245_10000422
209 Ga0105245_10005472
210 Ga0105245_10025915
211 Ga0105247_10024239
212 Ga0114129_10057729
213 Ga0114129_10151835
214 Ga0105241_10051851
215 Ga0105242_10023092
216 Ga0105242_10108980
217 Ga0105248_10005934
218 Ga0105248_10180762
219 Ga0105237_10011523
220 Ga0105249_10127747
221 Ga0157370_10002071
222 Ga0157370_10022126
223 Ga0157369_10002856
224 Ga0157369_10022961
225 Ga0157369_10116198
226 Ga0157374_10007447
227 Ga0157378_10020596
228 Ga0163162_10040187
229 Ga0157372_10198684
230 Ga0157375_10004021
231 Ga0163163_10055607
232 Ga0213875_10000006
233 Ga0213875_10000010
234 Ga0213875_10001815
235 Ga0213875_10002457
236 Ga0213875_10016075
237 Ga0207707_10002870
238 Ga0207695_10005503
239 Ga0207695_10006212
240 Ga0207657_10007196
241 Ga0207657_10152585
242 Ga0207694_10103657
243 Ga0207659_10057525
244 Ga0207687_10001145
245 Ga0207687_10013704
246 Ga0207687_10051462
247 Ga0207686_10052574
248 Ga0207670_10000369
249 Ga0207704_10018020
250 Ga0207711_10002964
251 Ga0207711_10114898
252 Ga0207661_10000010
253 Ga0207667_10010701
254 Ga0207667_10041496
255 Ga0207667_10115221
256 Ga0207667_10141403
257 Ga0207651_10065087
258 Ga0207703_10000041
259 Ga0207703_10010834
260 Ga0207703_10022959
261 Ga0207703_10046424
262 Ga0207639_10007856
263 Ga0207678_10004304
264 Ga0207702_10026891
265 Ga0207702_10043006
266 Ga0268266_10122358
267 Ga0265313_10015064
268 Ga0265314_10002183
269 Ga0265314_10009181
270 Ga0373926_0017206
271 Ga0373934_0021889
272 Ga0373956_0007838
273 Ga0373943_0033737
274 Ga0373935_0060912
275 Ga0373927_0002415
276 Ga0373927_0008481
277 Ga0373927_0023094
278 Ga0373933_0001634
279 Ga0373937_0022753
280 Ga0373925_0051868
281 Ga0436364_0149819
282 Ga0436364_0202263
283 Ga0436364_0478514
284 Ga0436364_0638821
285 Ga0436364_1067059
286 Ga0436364_1217214
287 Ga0436364_1343448
288 Ga0436365_0826975
289 Ga0436360_0195779
290 Ga0436361_0161441
291 Ga0436361_0619131
292 Ga0466967_0110496
293 Ga0495580_0030708
294 Ga0495580_0031419
295 Ga0495580_0044018
296 Ga0495580_0064780
297 Ga0495594_0065096
298 Ga0495587_0000955
299 Ga0495645_0030773
300 Ga0495599_0000664
301 Ga0495602_0001157
302 Ga0496115_0111144
303 Ga0501033_0048729
304 Ga0501034_0026159
305 Ga0501036_0000271
306 Ga0501037_0030989
307 Ga0501039_0064033
308 Ga0501046_0000010
309 Ga0501046_0001715
310 Ga0501047_0034292
311 Ga0501067_0004113
312 Ga0501068_0000546
313 Ga0501069_0000350
314 Ga0501070_0021388
315 Ga0501073_0000765
316 Ga0501074_0013068
317 Ga0501077_0010709
318 Ga0501079_0018477
319 Ga0501080_0005676
320 Ga0501083_0038860
321 Ga0501044_0012306
322 nmdc:mga05p37_18348_c1
323 nmdc:mga06r32_10715_c1
324 Ga0500568_0005397
325 Ga0501084_0003967
326 Ga0501082_0027385
327 2643839577
328 2644730782

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03814

KdpA

Potassium-transporting ATPase A subunit

10

594

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7nnl-assembly1.cif.gz_A cryo-em structure of the kdpfabc complex in an e1-atp conformation loaded with k+ 0.9014 1 568
5mrw-assembly2.cif.gz_E structure of the kdpfabc complex 0.9 1 568
7nnp-assembly1.cif.gz_A rb-loaded cryo-em structure of the e1-atp kdpfabc complex. 0.8988 1 568
7nnl-assembly1.cif.gz_A cryo-em structure of the kdpfabc complex in an e1-atp conformation loaded with k+ 0.8983 1 568
5mrw-assembly2.cif.gz_E structure of the kdpfabc complex 0.8969 1 568
ID Description Score Start End Superfamily
af_Q54DA4_179_630_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.3652 63 504 1.10.287.70
af_D4A7N4_29_264_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.3047 63 351 1.20.1070.10
af_A0A1D6GV20_178_549_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.2959 63 504 1.10.287.70
af_A0A1D6I586_171_443_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2927 42 350 1.20.1070.10
af_D4A7N4_29_264_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2903 63 351 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A5R2N6Y6-F1-model_v4 Potassium-transporting ATPase subunit KdpA 0.9797 1 196 GO:0005886
GO:0008556
AF-A0A519WYV0-F1-model_v4 deleted 0.9788 1 183
AF-A0A519WYV0-F1-model_v4 deleted 0.9735 1 183
AF-A0A4Q3I6L8-F1-model_v4 deleted 0.9726 1 213
AF-A0A2V2G0V3-F1-model_v4 Potassium-transporting ATPase subunit KdpA 0.9703 6 176 GO:0005886
GO:0008556

Map