F244132

General Info

Members Datasets Scaffolds Average Seq Length
164 124 328 504

Family's Representative Sequence

Representative Sequence 3300028379|Ga0268266_10000082|Ga0268266_1000008270
Length 558
Sequence MTASRRAPIVAAHPGAPDGLDPGAGKKDSAVKIKTDEIASVIRQEIQQFATQLEVSEVGRVIEIGDGIARIYGLSNAMAGELLEFQSSAGAVMGQVFNLEEDTVGAVVYGDYKKIKEGDVVKATGRLLEVPVGEALLGRVVDPLGRPIDGMGPINTTEFRKVDIIAPGIAERQPVTEPVQTGIKSIDSMIPIGKGQRELIIGDRKTGKTAVAIDTIINQKQYWGTKDAVVCIYVAVGQKESTVAAVVETLRKNGAMDYTIVVSAGASDPAPMQYIAPYSGCAMGEYFMWQGKTRDGGGASGQGPSGKPKHALCIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERATKLSDENGAGSLTALPIIETQEGDVSAYIPTNVISITDGQIYLEPELFFSGVRPAINVGISVSRVGGNAQVKGMKKISGSLRLDLAAARELEAFAQLGTELDKATQRQLDRGRRFIELLKQGQYTPFHITDQIVSIFAGTKGLLDDVPVANVREFENGLVEYMSTLGKPVRDELNQKLAIDAALEKKLEDAIKAFKSTFKPK

Samples

Sample ID Description Type Environment
1 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
18 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
22 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
23 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
24 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
25 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
26 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
27 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
28 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
29 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
31 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
44 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
45 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
46 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
47 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
48 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
49 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
50 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
51 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
52 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
53 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
54 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
55 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
56 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
57 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
58 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
59 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
60 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
61 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
62 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
63 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
64 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
65 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
66 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
67 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
68 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
69 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
70 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
71 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
72 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
73 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
74 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
75 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
76 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
77 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
78 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
79 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
87 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
88 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
89 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
92 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
93 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
94 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
95 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
96 2511231028 Bradyrhizobium sp. YR681 Isolate Rhizosphere
97 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
98 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
99 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
100 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
101 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
102 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
103 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
104 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
105 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
106 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
107 2842038055 Bradyrhizobium centrosematis SEMIA 424 Isolate Nodule
108 2842045827 Bradyrhizobium centrosematis SEMIA 431 Isolate Nodule
109 2857509624 Bradyrhizobium sp. R-73088 Isolate Unclassified
110 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
111 2932794094 Bradyrhizobium sp. S3.2.6 Isolate Nodule
112 2932801729 Bradyrhizobium sp. S3.3.6 Isolate Nodule
113 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule
114 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
115 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
116 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
117 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
118 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
119 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
120 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
121 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
122 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
123 3005506211 Bradyrhizobium diazoefficiens SZCCT0449 Isolate Unclassified
124 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.27
Metatranscriptomes 3.05
Isolates 17.68

Biome Distribution

Category Percentage (%)
Aerial Root 1.22
Bulb 0
Endosphere 2.44
Nodule 3.66
Rhizoplane 1.22
Rhizosphere 82.93
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0268266_10000082 3300028379 Bacteria 205422
2 JGI25165J46597_1004970 3300003214 Bacteria 2674
3 Ga0055539_1002953 3300003752 Bacteria 2458
4 Ga0055531_10004645 3300003794 Bacteria 8247
5 Ga0070683_100122881 3300005329 Bacteria 2453
6 Ga0070669_100130743 3300005353 Bacteria 1925
7 Ga0070675_100025791 3300005354 Bacteria 4712
8 Ga0070675_100075496 3300005354 Bacteria 2802
9 Ga0070714_100005094 3300005435 Bacteria 9993
10 Ga0070699_100001110 3300005518 Bacteria 25050
11 Ga0070697_100025226 3300005536 Bacteria 4740
12 Ga0070665_100000577 3300005548 Bacteria 51249
13 Ga0068855_100056271 3300005563 Bacteria 4616
14 Ga0068859_100080464 3300005617 Bacteria 3299
15 Ga0068862_100040386 3300005844 Bacteria 3965
16 Ga0081539_10043619 3300005985 Bacteria 2597
17 Ga0075428_100011413 3300006844 Bacteria 9884
18 Ga0075428_100095507 3300006844 Bacteria 3241
19 Ga0075428_100139999 3300006844 Bacteria 2631
20 Ga0075428_100267975 3300006844 Bacteria 1838
21 Ga0075434_100191274 3300006871 Bacteria 2067
22 Ga0097620_100080464 3300006931 Bacteria 3299
23 Ga0105240_10019155 3300009093 Bacteria 9151
24 Ga0111539_10003809 3300009094 Bacteria 19847
25 Ga0157370_10055166 3300013104 Bacteria 3787
26 Ga0157369_10094272 3300013105 Bacteria 3195
27 Ga0157369_10124454 3300013105 Bacteria 2734
28 Ga0157372_10018857 3300013307 Bacteria 7424
29 Ga0157372_10021070 3300013307 Bacteria 7039
30 Ga0157372_10113165 3300013307 Bacteria 3110
31 Ga0163163_10004923 3300014325 Bacteria 11488
32 Ga0157380_10006852 3300014326 Bacteria 8052
33 Ga0183365_10001 3300015684 Bacteria 2090444
34 Ga0197907_10489552 3300020069 Bacteria 6976
35 Ga0206350_11185780 3300020080 Bacteria 6864
36 Ga0206354_10397622 3300020081 Bacteria 4204
37 Ga0213873_10000194 3300021358 Bacteria 11088
38 Ga0224712_10000370 3300022467 Bacteria 8662
39 Ga0207643_10029531 3300025908 Bacteria 3049
40 Ga0207695_10000451 3300025913 Bacteria 89474
41 Ga0207695_10011350 3300025913 Bacteria 10798
42 Ga0207695_10121878 3300025913 Bacteria 2574
43 Ga0207649_10061312 3300025920 Bacteria 2367
44 Ga0207706_10019537 3300025933 Bacteria 6095
45 Ga0207704_10014321 3300025938 Bacteria 4001
46 Ga0207691_10001211 3300025940 Bacteria 25698
47 Ga0207667_10039901 3300025949 Bacteria 5000
48 Ga0207667_10213475 3300025949 Bacteria 1978
49 Ga0207648_10014147 3300026089 Bacteria 7380
50 Ga0207674_10003492 3300026116 Bacteria 19196
51 Ga0207675_100037071 3300026118 Bacteria 4549
52 Ga0207683_10001572 3300026121 Bacteria 20567
53 Ga0207428_10009681 3300027907 Bacteria 8634
54 Ga0268266_10001142 3300028379 Bacteria 32955
55 Ga0265338_10004617 3300028800 Bacteria 18517
56 Ga0265338_10015010 3300028800 Bacteria 8555
57 Ga0265339_10030687 3300031249 Bacteria 3043
58 Ga0265327_10037683 3300031251 Bacteria 2644
59 Ga0265316_10007108 3300031344 Bacteria 10588
60 Ga0265316_10037581 3300031344 Bacteria 3907
61 Ga0265313_10011624 3300031595 Bacteria 5458
62 Ga0265313_10067713 3300031595 Bacteria 1651
63 Ga0316575_10024524 3300031665 Bacteria 2336
64 Ga0316575_10041554 3300031665 Bacteria 1819
65 Ga0265314_10001263 3300031711 Bacteria 28834
66 Ga0316576_10028824 3300031727 Bacteria 3918
67 Ga0307410_10048984 3300031852 Bacteria 2834
68 Ga0307409_100134387 3300031995 Bacteria 2120
69 Ga0316588_1007302 3300033528 Bacteria 2240
70 Ga0316574_0024863 3300035398 Bacteria 3589
71 Ga0373937_0005341 3300036401 Bacteria 10983
72 Ga0316582_0028005 3300036647 Bacteria 3410
73 Ga0316582_0053492 3300036647 Bacteria 2569
74 Ga0395905_0000022 3300037471 Bacteria 321527
75 Ga0400490_16057 3300038726 Bacteria 26925
76 Ga0400490_51407 3300038726 Bacteria 7860
77 Ga0400489_90612 3300039093 Bacteria 2095
78 Ga0436360_1068364 3300039438 Bacteria 6694
79 Ga0436361_0573255 3300039447 Bacteria 11361
80 Ga0436361_0883550 3300039447 Bacteria 4108
81 Ga0436362_0187952 3300039453 Bacteria 2852
82 Ga0451577_0000046 3300042876 Bacteria 320581
83 Ga0451577_0000163 3300042876 Bacteria 145903
84 Ga0451577_0000640 3300042876 Bacteria 55750
85 Ga0451577_0067780 3300042876 Bacteria 3183
86 Ga0466969_0013758 3300044656 Bacteria 4260
87 Ga0466972_0054614 3300044658 Bacteria 1922
88 Ga0453684_0000178 3300044712 Bacteria 282502
89 Ga0453684_0000317 3300044712 Bacteria 204407
90 Ga0453684_0001037 3300044712 Bacteria 88904
91 Ga0453684_0207989 3300044712 Bacteria 2277
92 Ga0451576_0000246 3300045051 Bacteria 132778
93 Ga0451576_0000298 3300045051 Bacteria 120202
94 Ga0451576_0046442 3300045051 Bacteria 4572
95 Ga0495629_0003103 3300046459 Bacteria 12597
96 Ga0495580_0024703 3300046472 Bacteria 4396
97 Ga0495580_0053510 3300046472 Bacteria 2848
98 Ga0495624_0033499 3300046690 Bacteria 3327
99 Ga0495660_0004395 3300046810 Bacteria 8538
100 Ga0495581_0027259 3300047315 Bacteria 3313
101 Ga0495674_0020744 3300047319 Bacteria 6083
102 Ga0495684_0007831 3300047471 Bacteria 8267
103 Ga0496105_0002119 3300048908 Bacteria 14370
104 Ga0496121_0030504 3300048924 Bacteria 4950
105 Ga0496126_0000108 3300048929 Bacteria 197529
106 Ga0501032_0111051 3300049569 Bacteria 1814
107 Ga0501034_0000180 3300049571 Bacteria 118201
108 Ga0501034_0000310 3300049571 Bacteria 86250
109 Ga0501034_0016398 3300049571 Bacteria 7605
110 Ga0501034_0039058 3300049571 Bacteria 4808
111 Ga0501036_0111890 3300049572 Bacteria 2307
112 Ga0501038_0004060 3300049574 Bacteria 13616
113 Ga0501043_0000254 3300049579 Bacteria 48500
114 Ga0501043_0088287 3300049579 Bacteria 2436
115 Ga0501043_0148370 3300049579 Bacteria 1836
116 Ga0501046_0000017 3300049580 Bacteria 229617
117 Ga0501047_0007925 3300049581 Bacteria 10015
118 Ga0501073_0000857 3300049589 Bacteria 21738
119 Ga0501080_0025311 3300049742 Bacteria 5507
120 Ga0501080_0143644 3300049742 Bacteria 2206
121 Ga0501083_0000039 3300049744 Bacteria 93251
122 Ga0501083_0002390 3300049744 Bacteria 12858
123 Ga0501083_0018657 3300049744 Bacteria 4832
124 Ga0501035_0128792 3300049822 Bacteria 2208
125 Ga0501044_0000971 3300049823 Bacteria 34481
126 Ga0501044_0005334 3300049823 Bacteria 14294
127 Ga0501044_0006550 3300049823 Bacteria 12856
128 Ga0501044_0044335 3300049823 Bacteria 4615
129 Ga0501045_0088145 3300049824 Bacteria 2292
130 Ga0501045_0185012 3300049824 Bacteria 1552
131 nmdc:mga08y16_2954_c1 3300050511 Bacteria 17512
132 nmdc:mga08y16_75171_c1 3300050511 Bacteria 3522
133 nmdc:mga0n895_33293_c1 3300050512 Bacteria 4952
134 nmdc:mga0a205_61193_c1 3300050515 Bacteria 3636
135 Ga0500616_0001353 3300053153 Bacteria 23929
136 2511395692 2511231028 Bacteria 8046582
137 2513642204 2513237094 Bacteria 8789602
138 2550899257 2548877040 Bacteria 7507281
139 2571533363 2571042143 Bacteria 6986194
140 2573036934 2571042588 Bacteria 5045676
141 2578339058 2576861424 Bacteria 5270569
142 2580933990 2579778775 Bacteria 5360914
143 2601640390 2600255286 Bacteria 5390125
144 2621277510 2619619294 Bacteria 5575484
145 2728530393 2728368933 Bacteria 7044283
146 2739792635 2739367756 Bacteria 4553612
147 2842043308 2842038055 Bacteria 8002051
148 2842052702 2842045827 Bacteria 8006841
149 2857516341 2857509624 Bacteria 7472071
150 2881641916 2881636855 Bacteria 5205297
151 2932794130 2932794094 Bacteria 7915132
152 2932809205 2932801729 Bacteria 7987968
153 2935889157 2935883170 Bacteria 7964738
154 2938652429 2938649242 Bacteria 7118381
155 2968561739 2968558590 Bacteria 6956864
156 2971410323 2971403814 Bacteria 7370929
157 2971514344 2971511577 Bacteria 5404012
158 2980180558 2980176882 Bacteria 5397533
159 2984531325 2984527788 Bacteria 5288478
160 2984537435 2984532647 Bacteria 5288506
161 2988227485 2988225383 Bacteria 7221625
162 2996637827 2996632988 Bacteria 6921523
163 3005508965 3005506211 Bacteria 6943378
164 8054471496 8054465665 Bacteria 7323556
165 Ga0268266_10000082
166 JGI25165J46597_1004970
167 Ga0055539_1002953
168 Ga0055531_10004645
169 Ga0070683_100122881
170 Ga0070669_100130743
171 Ga0070675_100025791
172 Ga0070675_100075496
173 Ga0070714_100005094
174 Ga0070699_100001110
175 Ga0070697_100025226
176 Ga0070665_100000577
177 Ga0068855_100056271
178 Ga0068859_100080464
179 Ga0068862_100040386
180 Ga0081539_10043619
181 Ga0075428_100011413
182 Ga0075428_100095507
183 Ga0075428_100139999
184 Ga0075428_100267975
185 Ga0075434_100191274
186 Ga0097620_100080464
187 Ga0105240_10019155
188 Ga0111539_10003809
189 Ga0157370_10055166
190 Ga0157369_10094272
191 Ga0157369_10124454
192 Ga0157372_10018857
193 Ga0157372_10021070
194 Ga0157372_10113165
195 Ga0163163_10004923
196 Ga0157380_10006852
197 Ga0183365_10001
198 Ga0197907_10489552
199 Ga0206350_11185780
200 Ga0206354_10397622
201 Ga0213873_10000194
202 Ga0224712_10000370
203 Ga0207643_10029531
204 Ga0207695_10000451
205 Ga0207695_10011350
206 Ga0207695_10121878
207 Ga0207649_10061312
208 Ga0207706_10019537
209 Ga0207704_10014321
210 Ga0207691_10001211
211 Ga0207667_10039901
212 Ga0207667_10213475
213 Ga0207648_10014147
214 Ga0207674_10003492
215 Ga0207675_100037071
216 Ga0207683_10001572
217 Ga0207428_10009681
218 Ga0268266_10001142
219 Ga0265338_10004617
220 Ga0265338_10015010
221 Ga0265339_10030687
222 Ga0265327_10037683
223 Ga0265316_10007108
224 Ga0265316_10037581
225 Ga0265313_10011624
226 Ga0265313_10067713
227 Ga0316575_10024524
228 Ga0316575_10041554
229 Ga0265314_10001263
230 Ga0316576_10028824
231 Ga0307410_10048984
232 Ga0307409_100134387
233 Ga0316588_1007302
234 Ga0316574_0024863
235 Ga0373937_0005341
236 Ga0316582_0028005
237 Ga0316582_0053492
238 Ga0395905_0000022
239 Ga0400490_16057
240 Ga0400490_51407
241 Ga0400489_90612
242 Ga0436360_1068364
243 Ga0436361_0573255
244 Ga0436361_0883550
245 Ga0436362_0187952
246 Ga0451577_0000046
247 Ga0451577_0000163
248 Ga0451577_0000640
249 Ga0451577_0067780
250 Ga0466969_0013758
251 Ga0466972_0054614
252 Ga0453684_0000178
253 Ga0453684_0000317
254 Ga0453684_0001037
255 Ga0453684_0207989
256 Ga0451576_0000246
257 Ga0451576_0000298
258 Ga0451576_0046442
259 Ga0495629_0003103
260 Ga0495580_0024703
261 Ga0495580_0053510
262 Ga0495624_0033499
263 Ga0495660_0004395
264 Ga0495581_0027259
265 Ga0495674_0020744
266 Ga0495684_0007831
267 Ga0496105_0002119
268 Ga0496121_0030504
269 Ga0496126_0000108
270 Ga0501032_0111051
271 Ga0501034_0000180
272 Ga0501034_0000310
273 Ga0501034_0016398
274 Ga0501034_0039058
275 Ga0501036_0111890
276 Ga0501038_0004060
277 Ga0501043_0000254
278 Ga0501043_0088287
279 Ga0501043_0148370
280 Ga0501046_0000017
281 Ga0501047_0007925
282 Ga0501073_0000857
283 Ga0501080_0025311
284 Ga0501080_0143644
285 Ga0501083_0000039
286 Ga0501083_0002390
287 Ga0501083_0018657
288 Ga0501035_0128792
289 Ga0501044_0000971
290 Ga0501044_0005334
291 Ga0501044_0006550
292 Ga0501044_0044335
293 Ga0501045_0088145
294 Ga0501045_0185012
295 nmdc:mga08y16_2954_c1
296 nmdc:mga08y16_75171_c1
297 nmdc:mga0n895_33293_c1
298 nmdc:mga0a205_61193_c1
299 Ga0500616_0001353
300 2511395692
301 2513642204
302 2550899257
303 2571533363
304 2573036934
305 2578339058
306 2580933990
307 2601640390
308 2621277510
309 2728530393
310 2739792635
311 2842043308
312 2842052702
313 2857516341
314 2881641916
315 2932794130
316 2932809205
317 2935889157
318 2938652429
319 2968561739
320 2971410323
321 2971514344
322 2980180558
323 2984531325
324 2984537435
325 2988227485
326 2996637827
327 3005508965
328 8054471496

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00306

ATP-synt_ab_C

ATP synthase alpha/beta chain, C terminal domain

426

551

0.99

PF00006

ATP-synt_ab

ATP synthase alpha/beta family, nucleotide-binding domain

304

419

0.97

PF00006

ATP-synt_ab

ATP synthase alpha/beta family, nucleotide-binding domain

182

294

0.97

PF02874

ATP-synt_ab_N

ATP synthase alpha/beta family, beta-barrel domain

54

125

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4tsf-assembly1.cif.gz_C the pathway of binding of the intrinsically disordered mitochondrial inhibitor protein to f1-atpase 0.9788 27 509
8h9l-assembly1.cif.gz_C human atp synthase f1 domain, state 3a 0.9783 26 507
7ajd-assembly1.cif.gz_AC bovine atp synthase dimer state1:state3 0.9775 27 507
7ajb-assembly1.cif.gz_B bovine atp synthase dimer state1:state1 0.9761 26 507
6zpo-assembly1.cif.gz_B bovine atp synthase monomer state 1 (combined) 0.9761 26 507
ID Description Score Start End Superfamily
4xd7B01 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9758 26 94 2.40.30.20
af_Q9XPJ9_41_108_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9755 26 91 2.40.30.20
3oaaB01 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9743 27 91 2.40.30.20
af_A0A2P2CLF9_96_382_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9743 94 379 3.40.50.300
af_P56757_373_501_1.20.150.20 Mainly Alpha;Up-down Bundle;Lysin;ATP synthase alpha/beta chain, C-terminal domain 0.9737 381 507 1.20.150.20
ID Description Score Start End GO Terms
AF-A0A537XDK8-F1-model_v4 F0F1 ATP synthase subunit alpha 0.9884 339 509 GO:0005524
GO:0043531
GO:0045261
GO:0046933
AF-A0A6N9XSX4-F1-model_v4 deleted 0.988 29 131
AF-A0A350V1C4-F1-model_v4 F0F1 ATP synthase subunit alpha (EC 3.6.3.14) 0.9852 416 509 GO:0005524
GO:0016787
GO:0043531
GO:0045261
GO:0046933
AF-A0A3D4Z5T9-F1-model_v4 F0F1 ATP synthase subunit alpha (EC 3.6.3.14) 0.9842 345 507 GO:0005524
GO:0016787
GO:0043531
GO:0045261
GO:0046933
AF-A0A645HM49-F1-model_v4 ATP synthase subunit alpha 0.9841 343 504 GO:0005524
GO:0043531
GO:0045261
GO:0046933

Map