F244035

General Info

Members Datasets Scaffolds Average Seq Length
164 135 328 501

Family's Representative Sequence

Representative Sequence 3300025914|Ga0207671_10000214|Ga0207671_1000021450
Length 555
Sequence MRSRDLCSASEIRWLPSRRHLWRQRSGRSHDLRGPIAAAALPEELTTITMIFQNPVIPGFHPDPSICRVGSDYYLVTSTFEYFPGVPIFHSTDLVHWRQAGYCLTRDSQLPLRSAWTSGGIFAPTIRWHKGTFYMVATNVSGMGNFYVTAERAEGPWSEPIVVTHDGKPVGGIDPSLLFDDDGTVYFSGTSGTATIDIETGALMSDLKHIWTGSGGRYAEAPHIYKINGLYYCMLAEGGTEPGHMVTIARSESPWGPYEPCPRNPILTHRDRGGYPIQSTGHADLIEAHDGSWWAVFLATRISAKYPNVHHLGRETFLAPVIWDSEGWPVIGNHGTVDREMPAPSFMIANEQKQANTTRDDFDTDKLALAWNFRRNPEPSDWSLSERPGSLVLKCSTVTLNDVAQPAFVGRRQEHFQCRFSANIEFNPLKEYEEAGLTVIMNEEHHYEIFLSGNNAGRKWVAVRRRIGDLIAIVREEPIEDGDLILSIEAGAEEYCFGYETREGKRKMLASGSTRYLSTEIAGGFTGVYLGMYATSNHHESTVSAYFDWAEYVFE

Samples

Sample ID Description Type Environment
1 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
12 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
13 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
14 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
15 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
16 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
17 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
18 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
19 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
20 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
25 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
26 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
27 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
28 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
29 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
30 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
31 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
32 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
33 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
34 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
35 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
36 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
37 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
38 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
39 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
40 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
41 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
42 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
43 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
44 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
45 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
46 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
47 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
48 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
49 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
50 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
51 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
52 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
53 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
54 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
55 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
56 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
57 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
58 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
59 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
60 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
61 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
62 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
63 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
64 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
65 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
66 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
67 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
68 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
69 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
70 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
71 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
72 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
73 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
74 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
75 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
76 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
77 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
78 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
79 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
80 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
81 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
82 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
83 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
84 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
85 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
86 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
87 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
93 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
94 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
96 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
97 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
98 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
99 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
100 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
101 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
102 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
103 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
104 2643221548 Streptomyces sp. Root55 Isolate Unclassified
105 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
106 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
107 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
108 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
109 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
110 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
111 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
112 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
113 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
114 2862574272 Streptomyces sp. AcE210 Isolate Nodule
115 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
116 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
117 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
118 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
119 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
120 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
121 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
122 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
123 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
124 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
125 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
126 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
127 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
128 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
129 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
130 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
131 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
132 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
133 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
134 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
135 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.05
Metatranscriptomes 0
Isolates 21.95

Biome Distribution

Category Percentage (%)
Aerial Root 1.22
Bulb 0
Endosphere 3.05
Nodule 0.61
Rhizoplane 1.22
Rhizosphere 81.71
Stem 0
Stem Tuber 0
Unclassified 1.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207671_10000214 3300025914 Bacteria 87235
2 Ga0055538_1000314 3300003751 Bacteria 23002
3 Ga0065704_10073001 3300005289 Bacteria 7688
4 Ga0070658_10002767 3300005327 Bacteria 14588
5 Ga0070660_100005680 3300005339 Bacteria 8646
6 Ga0070668_100000793 3300005347 Bacteria 21754
7 Ga0070714_100046235 3300005435 Bacteria 3691
8 Ga0070706_100011353 3300005467 Bacteria 8278
9 Ga0068855_100000004 3300005563 Bacteria 340133
10 Ga0068855_100014787 3300005563 Bacteria 9398
11 Ga0068856_100004758 3300005614 Bacteria 13474
12 Ga0068861_100002465 3300005719 Bacteria 12067
13 Ga0105237_10000029 3300009545 Bacteria 198582
14 Ga0105237_10000358 3300009545 Bacteria 64570
15 Ga0105238_10003953 3300009551 Bacteria 14707
16 Ga0105239_10142055 3300010375 Bacteria 2676
17 Ga0157374_10037780 3300013296 Bacteria 4435
18 Ga0157374_10140699 3300013296 Bacteria 2342
19 Ga0182008_10006440 3300014497 Bacteria 6565
20 Ga0182007_10000862 3300015262 Bacteria 16823
21 Ga0182005_1000073 3300015265 Bacteria 80498
22 Ga0209784_100234 3300025224 Bacteria 36493
23 Ga0207705_10002939 3300025909 Bacteria 13023
24 Ga0207684_10004853 3300025910 Bacteria 12581
25 Ga0207671_10000144 3300025914 Bacteria 109788
26 Ga0207667_10000456 3300025949 Bacteria 54803
27 Ga0207667_10023230 3300025949 Bacteria 6829
28 Ga0207675_100005502 3300026118 Bacteria 12120
29 Ga0316177_1006717 3300030731 Bacteria 5477
30 Ga0316176_1060807 3300030732 Bacteria 11857
31 Ga0316183_1180191 3300030742 Bacteria 65717
32 Ga0316181_1193130 3300030744 Bacteria 19541
33 Ga0307513_10023363 3300031456 Bacteria 7223
34 Ga0316576_10072020 3300031727 Archaea 2550
35 Ga0307411_10039995 3300032005 Bacteria 2971
36 Ga0373942_0000602 3300035207 Bacteria 10106
37 Ga0316584_0112337 3300036712 Bacteria 2039
38 Ga0395900_0017762 3300037418 Bacteria 7261
39 Ga0395900_0026427 3300037418 Bacteria 5944
40 Ga0395898_0002333 3300037466 Bacteria 22642
41 Ga0395901_0087343 3300038443 Unclassified 3261
42 Ga0395901_0149184 3300038443 Bacteria 2457
43 Ga0400489_76142 3300039093 Bacteria 4773
44 Ga0439436_0002861 3300041404 Bacteria 5237
45 Ga0439439_0002246 3300041406 Bacteria 4066
46 Ga0451837_0798292 3300041494 Bacteria 4507
47 Ga0439449_0000179 3300042007 Bacteria 21988
48 Ga0439449_0016477 3300042007 Bacteria 2777
49 Ga0439449_0027066 3300042007 Bacteria 2140
50 Ga0466969_0001555 3300044656 Bacteria 12327
51 Ga0466966_0000812 3300044684 Bacteria 19893
52 Ga0466966_0016636 3300044684 Bacteria 4858
53 Ga0466961_0006062 3300044693 Bacteria 7664
54 Ga0466961_0017975 3300044693 Bacteria 4546
55 Ga0466961_0072976 3300044693 Bacteria 2176
56 Ga0466968_0021199 3300044735 Bacteria 2630
57 Ga0466960_0001037 3300044901 Bacteria 9953
58 Ga0466959_0165887 3300045049 Bacteria 1551
59 Ga0451576_0050519 3300045051 Bacteria 4360
60 Ga0495592_0000011 3300046454 Bacteria 156647
61 Ga0495592_0015312 3300046454 Bacteria 5820
62 Ga0495603_0003936 3300046455 Bacteria 8847
63 Ga0495603_0016069 3300046455 Bacteria 4525
64 Ga0495590_0021650 3300046457 Bacteria 2277
65 Ga0495629_0011513 3300046459 Bacteria 6425
66 Ga0495651_0003558 3300046462 Bacteria 11947
67 Ga0495651_0025430 3300046462 Bacteria 4608
68 Ga0495651_0036268 3300046462 Bacteria 3839
69 Ga0495653_0000683 3300046463 Bacteria 25936
70 Ga0495662_0000263 3300046476 Bacteria 22241
71 Ga0495664_0000244 3300046477 Bacteria 26149
72 Ga0495594_0076816 3300046499 Bacteria 1862
73 Ga0495608_0041122 3300046511 Bacteria 3095
74 Ga0495628_0000064 3300046516 Bacteria 85991
75 Ga0495630_0000035 3300046517 Bacteria 118545
76 Ga0495666_0000662 3300046526 Bacteria 15542
77 Ga0495652_0003654 3300046529 Bacteria 15067
78 Ga0495640_0012105 3300046533 Bacteria 6607
79 Ga0495587_0000064 3300046536 Bacteria 90007
80 Ga0495645_0000042 3300046543 Bacteria 91093
81 Ga0495667_0000227 3300046559 Bacteria 36831
82 Ga0495634_0002520 3300046642 Bacteria 15180
83 Ga0495634_0003330 3300046642 Bacteria 12922
84 Ga0495635_0002187 3300046663 Bacteria 13296
85 Ga0495635_0003302 3300046663 Bacteria 11146
86 Ga0495588_0045324 3300046674 Bacteria 2254
87 Ga0495657_0000075 3300046675 Bacteria 89389
88 Ga0495657_0010791 3300046675 Bacteria 6860
89 Ga0495657_0012229 3300046675 Bacteria 6382
90 Ga0495599_0000044 3300046678 Bacteria 89350
91 Ga0495646_0000028 3300046680 Bacteria 92735
92 Ga0495613_0002071 3300046689 Bacteria 15249
93 Ga0495589_0010428 3300046794 Bacteria 4827
94 Ga0495600_0000034 3300046809 Bacteria 82127
95 Ga0495600_0001063 3300046809 Bacteria 14886
96 Ga0495604_0000542 3300047317 Bacteria 33256
97 Ga0495674_0000036 3300047319 Bacteria 103830
98 Ga0495676_0005899 3300047321 Bacteria 11247
99 Ga0495676_0023553 3300047321 Bacteria 5342
100 Ga0495676_0025097 3300047321 Bacteria 5149
101 Ga0495680_0000811 3300047322 Bacteria 34912
102 Ga0495675_0000464 3300047444 Bacteria 26731
103 Ga0495675_0076928 3300047444 Bacteria 2103
104 Ga0495685_020035 3300047447 Bacteria 2298
105 Ga0495685_030681 3300047447 Bacteria 1848
106 Ga0495684_0004963 3300047471 Bacteria 10393
107 Ga0495684_0058962 3300047471 Bacteria 2923
108 Ga0495602_0000078 3300048088 Bacteria 94384
109 Ga0495614_0004957 3300048089 Bacteria 6008
110 Ga0496122_0045653 3300048925 Bacteria 3403
111 Ga0496122_0068608 3300048925 Bacteria 2544
112 Ga0496123_0008341 3300048926 Bacteria 9533
113 Ga0496125_0001769 3300048928 Bacteria 29933
114 Ga0501032_0003298 3300049569 Bacteria 12411
115 Ga0501034_0004096 3300049571 Bacteria 16360
116 Ga0501046_0071314 3300049580 Bacteria 2699
117 Ga0501047_0001462 3300049581 Bacteria 23052
118 Ga0501048_0010579 3300049582 Bacteria 6884
119 Ga0501217_002627 3300049661 Bacteria 3558
120 Ga0501257_005359 3300049686 Unclassified 2824
121 Ga0501035_0002049 3300049822 Bacteria 20088
122 Ga0501044_0002512 3300049823 Bacteria 20906
123 Ga0501044_0019589 3300049823 Bacteria 7234
124 Ga0495601_0006637 3300053077 Bacteria 6771
125 Ga0500646_0011127 3300053090 Bacteria 2310
126 Ga0500641_0048899 3300053096 Bacteria 1733
127 Ga0500588_0004427 3300053146 Bacteria 3046
128 Ga0501082_0034662 3300060353 Bacteria 4351
129 2550902418 2548877040 Bacteria 7507281
130 2601637875 2600255286 Bacteria 5390125
131 2601639509 2600255286 Bacteria 5390125
132 2643735701 2643221543 Bacteria 6628015
133 2643761014 2643221548 Bacteria 8053412
134 2644427898 2643221676 Bacteria 8119172
135 2644462337 2643221682 Bacteria 6743283
136 2728535017 2728368933 Bacteria 7044283
137 2793182642 2791355222 Bacteria 5898266
138 2819573142 2818991442 Bacteria 8318214
139 2819695815 2818991463 Bacteria 7948711
140 2821112917 2821111986 Bacteria 6894338
141 2832004825 2832004796 Bacteria 6538017
142 2842903810 2842903701 Bacteria 6986368
143 2862581862 2862574272 Bacteria 10567477
144 2864738059 2864733723 Bacteria 6770668
145 2865004757 2865002811 Bacteria 6333767
146 2866070205 2866065130 Bacteria 6518152
147 2885532036 2885526491 Bacteria 7164189
148 2889047256 2889042446 Bacteria 7618936
149 2895502234 2895498888 Bacteria 5283788
150 2904162782 2904162308 Bacteria 7086713
151 2904494158 2904490793 Bacteria 7046938
152 2919163230 2919160200 Bacteria 6929020
153 2931384308 2931384279 Bacteria 7299545
154 2938655536 2938649242 Bacteria 7118381
155 2945997076 2945991243 Bacteria 7008369
156 2946059742 2946053406 Bacteria 6978655
157 2966599087 2966598605 Bacteria 7676064
158 2968561580 2968558590 Bacteria 6956864
159 2984529506 2984527788 Bacteria 5288478
160 2984535611 2984532647 Bacteria 5288506
161 2988230883 2988225383 Bacteria 7221625
162 2996634587 2996632988 Bacteria 6921523
163 8001787586 8001781756 Bacteria 9586736
164 8054468642 8054465665 Bacteria 7323556
165 Ga0207671_10000214
166 Ga0055538_1000314
167 Ga0065704_10073001
168 Ga0070658_10002767
169 Ga0070660_100005680
170 Ga0070668_100000793
171 Ga0070714_100046235
172 Ga0070706_100011353
173 Ga0068855_100000004
174 Ga0068855_100014787
175 Ga0068856_100004758
176 Ga0068861_100002465
177 Ga0105237_10000029
178 Ga0105237_10000358
179 Ga0105238_10003953
180 Ga0105239_10142055
181 Ga0157374_10037780
182 Ga0157374_10140699
183 Ga0182008_10006440
184 Ga0182007_10000862
185 Ga0182005_1000073
186 Ga0209784_100234
187 Ga0207705_10002939
188 Ga0207684_10004853
189 Ga0207671_10000144
190 Ga0207667_10000456
191 Ga0207667_10023230
192 Ga0207675_100005502
193 Ga0316177_1006717
194 Ga0316176_1060807
195 Ga0316183_1180191
196 Ga0316181_1193130
197 Ga0307513_10023363
198 Ga0316576_10072020
199 Ga0307411_10039995
200 Ga0373942_0000602
201 Ga0316584_0112337
202 Ga0395900_0017762
203 Ga0395900_0026427
204 Ga0395898_0002333
205 Ga0395901_0087343
206 Ga0395901_0149184
207 Ga0400489_76142
208 Ga0439436_0002861
209 Ga0439439_0002246
210 Ga0451837_0798292
211 Ga0439449_0000179
212 Ga0439449_0016477
213 Ga0439449_0027066
214 Ga0466969_0001555
215 Ga0466966_0000812
216 Ga0466966_0016636
217 Ga0466961_0006062
218 Ga0466961_0017975
219 Ga0466961_0072976
220 Ga0466968_0021199
221 Ga0466960_0001037
222 Ga0466959_0165887
223 Ga0451576_0050519
224 Ga0495592_0000011
225 Ga0495592_0015312
226 Ga0495603_0003936
227 Ga0495603_0016069
228 Ga0495590_0021650
229 Ga0495629_0011513
230 Ga0495651_0003558
231 Ga0495651_0025430
232 Ga0495651_0036268
233 Ga0495653_0000683
234 Ga0495662_0000263
235 Ga0495664_0000244
236 Ga0495594_0076816
237 Ga0495608_0041122
238 Ga0495628_0000064
239 Ga0495630_0000035
240 Ga0495666_0000662
241 Ga0495652_0003654
242 Ga0495640_0012105
243 Ga0495587_0000064
244 Ga0495645_0000042
245 Ga0495667_0000227
246 Ga0495634_0002520
247 Ga0495634_0003330
248 Ga0495635_0002187
249 Ga0495635_0003302
250 Ga0495588_0045324
251 Ga0495657_0000075
252 Ga0495657_0010791
253 Ga0495657_0012229
254 Ga0495599_0000044
255 Ga0495646_0000028
256 Ga0495613_0002071
257 Ga0495589_0010428
258 Ga0495600_0000034
259 Ga0495600_0001063
260 Ga0495604_0000542
261 Ga0495674_0000036
262 Ga0495676_0005899
263 Ga0495676_0023553
264 Ga0495676_0025097
265 Ga0495680_0000811
266 Ga0495675_0000464
267 Ga0495675_0076928
268 Ga0495685_020035
269 Ga0495685_030681
270 Ga0495684_0004963
271 Ga0495684_0058962
272 Ga0495602_0000078
273 Ga0495614_0004957
274 Ga0496122_0045653
275 Ga0496122_0068608
276 Ga0496123_0008341
277 Ga0496125_0001769
278 Ga0501032_0003298
279 Ga0501034_0004096
280 Ga0501046_0071314
281 Ga0501047_0001462
282 Ga0501048_0010579
283 Ga0501217_002627
284 Ga0501257_005359
285 Ga0501035_0002049
286 Ga0501044_0002512
287 Ga0501044_0019589
288 Ga0495601_0006637
289 Ga0500646_0011127
290 Ga0500641_0048899
291 Ga0500588_0004427
292 Ga0501082_0034662
293 2550902418
294 2601637875
295 2601639509
296 2643735701
297 2643761014
298 2644427898
299 2644462337
300 2728535017
301 2793182642
302 2819573142
303 2819695815
304 2821112917
305 2832004825
306 2842903810
307 2862581862
308 2864738059
309 2865004757
310 2866070205
311 2885532036
312 2889047256
313 2895502234
314 2904162782
315 2904494158
316 2919163230
317 2931384308
318 2938655536
319 2945997076
320 2946059742
321 2966599087
322 2968561580
323 2984529506
324 2984535611
325 2988230883
326 2996634587
327 8001787586
328 8054468642

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04616

Glyco_hydro_43

Glycosyl hydrolases family 43

52

329

0.96

PF17851

GH43_C2

Beta xylosidase C-terminal Concanavalin A-like domain

359

553

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5z5d-assembly1.cif.gz_A crystal structure of a thermostable glycoside hydrolase family 43 {beta}-1,4-xylosidase from geobacillus thermoleovorans it-08 0.9662 1 496
5joz-assembly2.cif.gz_B bacteroides ovatus xyloglucan pul gh43b 0.9599 1 496
5joy-assembly1.cif.gz_A bacteroides ovatus xyloglucan pul gh43a in complex with aralog 0.9578 2 496
7k1r-assembly1.cif.gz_A x-ray structure of an enterobacter gh43 beta-xylosidase: ecxyl43 f507a mutant 0.9568 1 496
3c2u-assembly1.cif.gz_A structure of the two subsite d-xylosidase from selenomonas ruminantium in complex with 1,3-bis[tris(hydroxymethyl)methylamino]propane 0.9562 1 497
ID Description Score Start End Superfamily
5z5fA01 Mainly Beta;5 Propeller;Tachylectin-2; Chain A;Glycosyl hydrolase domain; family 43 0.9729 1 299 2.115.10.20
5z5iA02 Mainly Beta;Sandwich;Jelly Rolls; 0.9725 306 496 2.60.120.200
5z5fA01 Mainly Beta;5 Propeller;Tachylectin-2; Chain A;Glycosyl hydrolase domain; family 43 0.951 1 299 2.115.10.20
5jozB01 Mainly Beta;5 Propeller;Tachylectin-2; Chain A;Glycosyl hydrolase domain; family 43 0.9492 1 302 2.115.10.20
5jozB02 Mainly Beta;Sandwich;Jelly Rolls; 0.9458 303 496 2.60.120.200
ID Description Score Start End GO Terms
AF-A0A259TMB6-F1-model_v4 Glycoside hydrolase 43 family protein 0.9941 1 497 GO:0004553
GO:0005975
AF-A0A259TMB6-F1-model_v4 Glycoside hydrolase 43 family protein 0.9842 1 497 GO:0004553
GO:0005975
AF-A0A060C3A6-F1-model_v4 Glyco_hydro_43 0.9829 146 219 GO:0004553
GO:0005975
AF-A0A432CA69-F1-model_v4 Glycoside hydrolase family 43 protein 0.9827 3 243 GO:0004553
GO:0005975
AF-K0J2W0-F1-model_v4 Xylosidase/arabinosidase (EC 3.2.1.37, EC 3.2.1.55) 0.9798 1 495 GO:0005975
GO:0009044
GO:0046556

Map