F243081

General Info

Members Datasets Scaffolds Average Seq Length
164 111 164 312

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100253663|Ga0070683_1002536632
Length 356
Sequence MKSGVRDEGRGTREAAPPAQAEVGSSPHPSSLIPASSPAVGVVGTGYLGRLHARILTEIAEANVIGFVETDDAIAAEVANALKLKRFDSVAALAREIDCAVVATPTTTHFDVARELLEAGVDVLVEKPITPTADDARHLIDIADANNRILQVGHVERYNPAIIAVAPLLNNVLYIEAERLGIFVGRSLDIDVLLDLMIHDLNLVLSFLGQKVVDVRAVGVAVMTEKVDITNVRLEFENGAVANLTASRVSQDRVRKIRFFGREAYISVDTKEQEVKGYRLVGKAVQPIEVTVTKQEPLRAELEAFLECVRTRTRPLVSGEDGLAAVELAIRVAGAIDESLKRFAWIPHPTVPHSTL

Samples

Sample ID Description Type Environment
1 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
57 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
58 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
87 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
88 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
89 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
90 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
91 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
92 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
95 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
96 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
97 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
98 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
99 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
100 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
104 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
105 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
106 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
107 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
108 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
109 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
110 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
111 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 94.51
Stem 0
Stem Tuber 0
Unclassified 5.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065707_10116236 3300005295 Bacteria 2244
2 Ga0070658_10017200 3300005327 Bacteria 5787
3 Ga0070676_10172003 3300005328 Bacteria 1402
4 Ga0070683_100000037 3300005329 Bacteria 120863
5 Ga0070683_100253663 3300005329 Unclassified 1673
6 Ga0070690_100073819 3300005330 Bacteria 2220
7 Ga0070670_100000059 3300005331 Bacteria 115840
8 Ga0070680_100006774 3300005336 Bacteria 8731
9 Ga0070682_100000004 3300005337 Bacteria 388780
10 Ga0070682_100115075 3300005337 Bacteria 1798
11 Ga0068868_100000069 3300005338 Bacteria 59364
12 Ga0068868_100000332 3300005338 Bacteria 31849
13 Ga0070689_100031632 3300005340 Bacteria 4023
14 Ga0070692_10000622 3300005345 Bacteria 11173
15 Ga0070675_100000019 3300005354 Bacteria 173624
16 Ga0070671_100094415 3300005355 Bacteria 2507
17 Ga0070688_100151217 3300005365 Bacteria 1587
18 Ga0070701_10000839 3300005438 Bacteria 11016
19 Ga0070700_100000023 3300005441 Bacteria 129791
20 Ga0070708_100039153 3300005445 Bacteria 4146
21 Ga0070706_100006023 3300005467 Bacteria 11462
22 Ga0070706_100083788 3300005467 Bacteria 2954
23 Ga0070706_100089768 3300005467 Bacteria 2850
24 Ga0070707_100011248 3300005468 Bacteria 8342
25 Ga0070707_100020108 3300005468 Bacteria 6296
26 Ga0070707_100206307 3300005468 Bacteria 1915
27 Ga0070698_100233250 3300005471 Bacteria 1773
28 Ga0070699_100055730 3300005518 Bacteria 3422
29 Ga0070699_100068362 3300005518 Bacteria 3085
30 Ga0070684_100000036 3300005535 Bacteria 96975
31 Ga0070684_100109392 3300005535 Bacteria 2477
32 Ga0070697_100227407 3300005536 Bacteria 1590
33 Ga0068853_100049966 3300005539 Bacteria 3596
34 Ga0068853_100121001 3300005539 Bacteria 2335
35 Ga0070672_100000700 3300005543 Bacteria 19849
36 Ga0070672_100131293 3300005543 Bacteria 2059
37 Ga0070686_100097444 3300005544 Bacteria 1980
38 Ga0070686_100155977 3300005544 Bacteria 1603
39 Ga0070696_100287925 3300005546 Unclassified 1254
40 Ga0070704_100037257 3300005549 Bacteria 3321
41 Ga0068854_100007961 3300005578 Bacteria 6786
42 Ga0070702_100160772 3300005615 Bacteria 1452
43 Ga0068864_100000025 3300005618 Bacteria 250062
44 Ga0068870_10007001 3300005840 Bacteria 5004
45 Ga0068858_100000126 3300005842 Bacteria 79740
46 Ga0070717_10000062 3300006028 Bacteria 91165
47 Ga0070717_10308505 3300006028 Bacteria 1408
48 Ga0070717_10329806 3300006028 Bacteria 1361
49 Ga0070716_100126744 3300006173 Bacteria 1607
50 Ga0075428_100005813 3300006844 Bacteria 13702
51 Ga0075431_100067976 3300006847 Bacteria 3678
52 Ga0075431_100333814 3300006847 Bacteria 1527
53 Ga0075434_100678488 3300006871 Bacteria 1048
54 Ga0068865_100113852 3300006881 Bacteria 2000
55 Ga0075436_100001433 3300006914 Bacteria 16216
56 Ga0075435_100000070 3300007076 Bacteria 52706
57 Ga0075435_100008194 3300007076 Bacteria 7484
58 Ga0075435_100017914 3300007076 Bacteria 5370
59 Ga0105240_10032408 3300009093 Bacteria 6765
60 Ga0111539_10000004 3300009094 Bacteria 751278
61 Ga0105245_10000084 3300009098 Bacteria 94992
62 Ga0105245_10000541 3300009098 Bacteria 34596
63 Ga0105245_10026263 3300009098 Bacteria 5125
64 Ga0105245_10404441 3300009098 Bacteria 1365
65 Ga0114129_10015023 3300009147 Bacteria 11022
66 Ga0114129_10027385 3300009147 Bacteria 8069
67 Ga0114129_10046491 3300009147 Bacteria 6100
68 Ga0114129_10384185 3300009147 Bacteria 1854
69 Ga0105242_10003725 3300009176 Bacteria 11850
70 Ga0105238_10000029 3300009551 Bacteria 182309
71 Ga0105239_10045773 3300010375 Bacteria 4795
72 Ga0157369_10000438 3300013105 Bacteria 55463
73 Ga0157378_10000271 3300013297 Bacteria 50385
74 Ga0157378_10000882 3300013297 Bacteria 27667
75 Ga0157378_10011797 3300013297 Bacteria 7651
76 Ga0157378_10222841 3300013297 Bacteria 1793
77 Ga0163162_10002365 3300013306 Bacteria 17726
78 Ga0157375_10000034 3300013308 Bacteria 184385
79 Ga0157375_10000039 3300013308 Bacteria 166726
80 Ga0157375_10000059 3300013308 Bacteria 118614
81 Ga0157380_10074658 3300014326 Bacteria 2753
82 Ga0157377_10000012 3300014745 Bacteria 274497
83 Ga0157376_10000002 3300014969 Bacteria 684532
84 Ga0213873_10000001 3300021358 Bacteria 1657979
85 Ga0213873_10000457 3300021358 Bacteria 6566
86 Ga0213876_10000037 3300021384 Bacteria 185653
87 Ga0213876_10000285 3300021384 Bacteria 46030
88 Ga0213876_10022091 3300021384 Bacteria 3365
89 Ga0213876_10022513 3300021384 Bacteria 3331
90 Ga0207699_10164104 3300025906 Bacteria 1481
91 Ga0207645_10122401 3300025907 Bacteria 1689
92 Ga0207643_10012628 3300025908 Bacteria 4562
93 Ga0207705_10148590 3300025909 Bacteria 1754
94 Ga0207684_10045353 3300025910 Bacteria 3729
95 Ga0207695_10097988 3300025913 Bacteria 2932
96 Ga0207662_10116761 3300025918 Bacteria 1669
97 Ga0207646_10024454 3300025922 Bacteria 5533
98 Ga0207646_10031765 3300025922 Bacteria 4779
99 Ga0207694_10000002 3300025924 Bacteria 1165763
100 Ga0207694_10000003 3300025924 Bacteria 1165533
101 Ga0207650_10000144 3300025925 Bacteria 85916
102 Ga0207650_10226602 3300025925 Bacteria 1506
103 Ga0207659_10000001 3300025926 Bacteria 660958
104 Ga0207687_10000019 3300025927 Bacteria 234280
105 Ga0207687_10000762 3300025927 Bacteria 21735
106 Ga0207687_10014560 3300025927 Bacteria 5149
107 Ga0207644_10244991 3300025931 Bacteria 1428
108 Ga0207686_10004479 3300025934 Bacteria 7485
109 Ga0207670_10019624 3300025936 Bacteria 4133
110 Ga0207704_10123393 3300025938 Bacteria 1778
111 Ga0207665_10159029 3300025939 Bacteria 1624
112 Ga0207665_10197879 3300025939 Bacteria 1463
113 Ga0207691_10002020 3300025940 Bacteria 19862
114 Ga0207691_10146123 3300025940 Bacteria 2081
115 Ga0207661_10000009 3300025944 Bacteria 421876
116 Ga0207651_10266412 3300025960 Bacteria 1409
117 Ga0207640_10012783 3300025981 Bacteria 4793
118 Ga0207677_10000020 3300026023 Bacteria 137014
119 Ga0207677_10000468 3300026023 Bacteria 26662
120 Ga0207703_10000466 3300026035 Bacteria 42551
121 Ga0207639_10000013 3300026041 Bacteria 293084
122 Ga0207708_10000022 3300026075 Bacteria 181216
123 Ga0207676_10000002 3300026095 Bacteria 1198607
124 Ga0207675_100306885 3300026118 Bacteria 1547
125 Ga0207428_10000006 3300027907 Bacteria 491716
126 Ga0265338_10010242 3300028800 Bacteria 11042
127 Ga0265338_10392877 3300028800 Bacteria 990
128 Ga0265324_10011471 3300029957 Bacteria 3375
129 Ga0307511_10002065 3300030521 Bacteria 21038
130 Ga0265328_10012180 3300031239 Bacteria 3425
131 Ga0265325_10033057 3300031241 Bacteria 2758
132 Ga0265340_10045377 3300031247 Bacteria 2147
133 Ga0265316_10001391 3300031344 Bacteria 26069
134 Ga0265316_10004622 3300031344 Bacteria 13654
135 Ga0307416_100267354 3300032002 Bacteria 1676
136 Ga0373932_0000519 3300035112 Bacteria 11842
137 Ga0373941_0004533 3300035115 Bacteria 3217
138 Ga0436365_0605606 3300039437 Bacteria 64934
139 Ga0436365_0980736 3300039437 Bacteria 54026
140 Ga0436365_1080427 3300039437 Bacteria 5660
141 Ga0436363_0152083 3300039450 Bacteria 1477
142 Ga0436362_0641120 3300039453 Bacteria 6880
143 Ga0436362_0969073 3300039453 Bacteria 64846
144 Ga0451577_0000011 3300042876 Bacteria 597389
145 Ga0451577_0001880 3300042876 Bacteria 26719
146 Ga0453683_0000313 3300044673 Bacteria 60061
147 Ga0453683_0028722 3300044673 Bacteria 3520
148 Ga0453684_0000087 3300044712 Bacteria 395597
149 Ga0453684_0001061 3300044712 Bacteria 87486
150 Ga0453684_0511034 3300044712 Bacteria 1329
151 Ga0451576_0019179 3300045051 Bacteria 7470
152 Ga0451576_0045097 3300045051 Bacteria 4645
153 Ga0495620_0003767 3300046515 Bacteria 8655
154 Ga0501073_0022479 3300049589 Bacteria 4540
155 Ga0501080_0035521 3300049742 Bacteria 4651
156 nmdc:mga05p37_19377_c1 3300050507 Bacteria 8231
157 nmdc:mga05p37_82395_c1 3300050507 Unclassified 3964
158 nmdc:mga06r32_1615_c1 3300050510 Bacteria 20326
159 nmdc:mga08y16_5_c1 3300050511 Bacteria 751284
160 nmdc:mga0rr50_1793_c1 3300050513 Bacteria 11558
161 nmdc:mga0rr50_3818_c1 3300050513 Bacteria 8745
162 nmdc:mga0rr50_84_c1 3300050513 Bacteria 52823
163 nmdc:mga08x19_416_c1 3300050514 Bacteria 25305
164 Ga0495655_0000289 3300053083 Bacteria 9182

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009551 Ga0105238_10000029 Ga0105238_100000296 269
2 3300014745 Ga0157377_10000012 Ga0157377_10000012229 269
3 3300039437 Ga0436365_0980736 Ga0436365_0980736_50365_51231 269
4 3300039453 Ga0436362_0641120 Ga0436362_0641120_2442_3308 269
5 3300009176 Ga0105242_10003725 Ga0105242_100037257 270
6 3300025934 Ga0207686_10004479 Ga0207686_100044792 270
7 3300009147 Ga0114129_10384185 Ga0114129_103841852 274
8 3300013297 Ga0157378_10222841 Ga0157378_102228412 278
9 3300005441 Ga0070700_100000023 Ga0070700_10000002358 280
10 3300009147 Ga0114129_10027385 Ga0114129_100273857 280
11 3300026075 Ga0207708_10000022 Ga0207708_100000229 280
12 3300050507 nmdc:mga05p37_82395_c1 nmdc:mga05p37_82395_c1_907_1866 280
13 3300042876 Ga0451577_0000011 Ga0451577_0000011_340917_341867 283
14 3300044673 Ga0453683_0000313 Ga0453683_0000313_6332_7282 283
15 3300044712 Ga0453684_0000087 Ga0453684_0000087_6220_7170 283
16 3300045051 Ga0451576_0019179 Ga0451576_0019179_6228_7178 283
17 3300028800 Ga0265338_10010242 Ga0265338_100102422 284
18 3300029957 Ga0265324_10011471 Ga0265324_100114712 284
19 3300031239 Ga0265328_10012180 Ga0265328_100121802 284
20 3300031241 Ga0265325_10033057 Ga0265325_100330572 284
21 3300031247 Ga0265340_10045377 Ga0265340_100453771 284
22 3300031344 Ga0265316_10001391 Ga0265316_1000139113 284
23 3300031344 Ga0265316_10004622 Ga0265316_100046229 284
24 3300007076 Ga0075435_100008194 Ga0075435_1000081944 285
25 3300028800 Ga0265338_10392877 Ga0265338_103928771 285
26 3300044712 Ga0453684_0511034 Ga0453684_0511034_67_1023 285
27 3300013308 Ga0157375_10000039 Ga0157375_1000003935 286
28 3300035115 Ga0373941_0004533 Ga0373941_0004533_1982_2899 287
29 3300050513 nmdc:mga0rr50_1793_c1 nmdc:mga0rr50_1793_c1_870_1787 287
30 3300005340 Ga0070689_100031632 Ga0070689_1000316324 289
31 3300005467 Ga0070706_100089768 Ga0070706_1000897683 289
32 3300005543 Ga0070672_100000700 Ga0070672_1000007004 289
33 3300005618 Ga0068864_100000025 Ga0068864_100000025180 289
34 3300005840 Ga0068870_10007001 Ga0068870_100070014 289
35 3300005842 Ga0068858_100000126 Ga0068858_10000012619 289
36 3300006173 Ga0070716_100126744 Ga0070716_1001267442 289
37 3300006871 Ga0075434_100678488 Ga0075434_1006784881 289
38 3300006881 Ga0068865_100113852 Ga0068865_1001138522 289
39 3300009098 Ga0105245_10000084 Ga0105245_1000008468 289
40 3300009098 Ga0105245_10000541 Ga0105245_1000054115 289
41 3300009098 Ga0105245_10404441 Ga0105245_104044412 289
42 3300013308 Ga0157375_10000034 Ga0157375_10000034139 289
43 3300014326 Ga0157380_10074658 Ga0157380_100746582 289
44 3300025908 Ga0207643_10012628 Ga0207643_100126284 289
45 3300025924 Ga0207694_10000002 Ga0207694_10000002171 289
46 3300025924 Ga0207694_10000003 Ga0207694_10000003929 289
47 3300025925 Ga0207650_10226602 Ga0207650_102266022 289
48 3300025927 Ga0207687_10000019 Ga0207687_10000019184 289
49 3300025927 Ga0207687_10000762 Ga0207687_1000076214 289
50 3300025936 Ga0207670_10019624 Ga0207670_100196243 289
51 3300025938 Ga0207704_10123393 Ga0207704_101233932 289
52 3300025940 Ga0207691_10002020 Ga0207691_1000202017 289
53 3300025960 Ga0207651_10266412 Ga0207651_102664122 289
54 3300026035 Ga0207703_10000466 Ga0207703_1000046616 289
55 3300026095 Ga0207676_10000002 Ga0207676_100000021010 289
56 3300005327 Ga0070658_10017200 Ga0070658_100172005 290
57 3300005329 Ga0070683_100000037 Ga0070683_10000003781 290
58 3300005331 Ga0070670_100000059 Ga0070670_10000005912 290
59 3300005337 Ga0070682_100000004 Ga0070682_10000000467 290
60 3300005337 Ga0070682_100115075 Ga0070682_1001150752 290
61 3300005338 Ga0068868_100000069 Ga0068868_10000006948 290
62 3300005338 Ga0068868_100000332 Ga0068868_10000033225 290
63 3300005345 Ga0070692_10000622 Ga0070692_1000062210 290
64 3300005535 Ga0070684_100000036 Ga0070684_10000003614 290
65 3300005539 Ga0068853_100121001 Ga0068853_1001210013 290
66 3300005543 Ga0070672_100131293 Ga0070672_1001312931 290
67 3300005544 Ga0070686_100097444 Ga0070686_1000974442 290
68 3300005578 Ga0068854_100007961 Ga0068854_1000079616 290
69 3300006028 Ga0070717_10000062 Ga0070717_1000006231 290
70 3300006914 Ga0075436_100001433 Ga0075436_1000014337 290
71 3300007076 Ga0075435_100000070 Ga0075435_10000007053 290
72 3300013105 Ga0157369_10000438 Ga0157369_1000043816 290
73 3300013297 Ga0157378_10000271 Ga0157378_100002716 290
74 3300013297 Ga0157378_10011797 Ga0157378_100117973 290
75 3300013308 Ga0157375_10000059 Ga0157375_1000005954 290
76 3300014969 Ga0157376_10000002 Ga0157376_10000002218 290
77 3300021358 Ga0213873_10000457 Ga0213873_100004574 290
78 3300021384 Ga0213876_10000285 Ga0213876_1000028538 290
79 3300025906 Ga0207699_10164104 Ga0207699_101641041 290
80 3300025909 Ga0207705_10148590 Ga0207705_101485901 290
81 3300025925 Ga0207650_10000144 Ga0207650_1000014457 290
82 3300025939 Ga0207665_10197879 Ga0207665_101978792 290
83 3300025940 Ga0207691_10146123 Ga0207691_101461231 290
84 3300025944 Ga0207661_10000009 Ga0207661_10000009327 290
85 3300025981 Ga0207640_10012783 Ga0207640_100127835 290
86 3300026023 Ga0207677_10000020 Ga0207677_10000020101 290
87 3300026023 Ga0207677_10000468 Ga0207677_1000046810 290
88 3300046515 Ga0495620_0003767 Ga0495620_0003767_6815_7741 290
89 3300050513 nmdc:mga0rr50_84_c1 nmdc:mga0rr50_84_c1_9149_10075 290
90 3300050514 nmdc:mga08x19_416_c1 nmdc:mga08x19_416_c1_20172_21098 290
91 3300053083 Ga0495655_0000289 Ga0495655_0000289_7671_8597 290
92 3300005330 Ga0070690_100073819 Ga0070690_1000738192 291
93 3300005336 Ga0070680_100006774 Ga0070680_1000067746 291
94 3300005354 Ga0070675_100000019 Ga0070675_10000001989 291
95 3300005539 Ga0068853_100049966 Ga0068853_1000499664 291
96 3300005544 Ga0070686_100155977 Ga0070686_1001559771 291
97 3300005546 Ga0070696_100287925 Ga0070696_1002879251 291
98 3300006028 Ga0070717_10308505 Ga0070717_103085052 291
99 3300006028 Ga0070717_10329806 Ga0070717_103298062 291
100 3300009093 Ga0105240_10032408 Ga0105240_100324086 291
101 3300009098 Ga0105245_10026263 Ga0105245_100262632 291
102 3300010375 Ga0105239_10045773 Ga0105239_100457732 291
103 3300013306 Ga0163162_10002365 Ga0163162_100023653 291
104 3300021384 Ga0213876_10022513 Ga0213876_100225132 291
105 3300025913 Ga0207695_10097988 Ga0207695_100979884 291
106 3300025926 Ga0207659_10000001 Ga0207659_1000000199 291
107 3300025927 Ga0207687_10014560 Ga0207687_100145606 291
108 3300026041 Ga0207639_10000013 Ga0207639_10000013188 291
109 3300026118 Ga0207675_100306885 Ga0207675_1003068851 291
110 3300032002 Ga0307416_100267354 Ga0307416_1002673542 291
111 3300035112 Ga0373932_0000519 Ga0373932_0000519_7591_8526 291
112 3300005328 Ga0070676_10172003 Ga0070676_101720032 292
113 3300005329 Ga0070683_100253663 Ga0070683_1002536632 292
114 3300005365 Ga0070688_100151217 Ga0070688_1001512172 292
115 3300005438 Ga0070701_10000839 Ga0070701_100008397 292
116 3300005445 Ga0070708_100039153 Ga0070708_1000391536 292
117 3300005467 Ga0070706_100006023 Ga0070706_1000060236 292
118 3300005467 Ga0070706_100083788 Ga0070706_1000837884 292
119 3300005468 Ga0070707_100011248 Ga0070707_1000112487 292
120 3300005468 Ga0070707_100020108 Ga0070707_1000201082 292
121 3300005468 Ga0070707_100206307 Ga0070707_1002063072 292
122 3300005471 Ga0070698_100233250 Ga0070698_1002332502 292
123 3300005518 Ga0070699_100055730 Ga0070699_1000557304 292
124 3300005518 Ga0070699_100068362 Ga0070699_1000683622 292
125 3300005535 Ga0070684_100109392 Ga0070684_1001093924 292
126 3300005536 Ga0070697_100227407 Ga0070697_1002274072 292
127 3300005615 Ga0070702_100160772 Ga0070702_1001607721 292
128 3300007076 Ga0075435_100017914 Ga0075435_1000179143 292
129 3300009147 Ga0114129_10015023 Ga0114129_100150239 292
130 3300009147 Ga0114129_10046491 Ga0114129_100464912 292
131 3300013297 Ga0157378_10000882 Ga0157378_100008822 292
132 3300021384 Ga0213876_10022091 Ga0213876_100220912 292
133 3300025907 Ga0207645_10122401 Ga0207645_101224012 292
134 3300025910 Ga0207684_10045353 Ga0207684_100453533 292
135 3300025922 Ga0207646_10024454 Ga0207646_100244542 292
136 3300025922 Ga0207646_10031765 Ga0207646_100317655 292
137 3300025939 Ga0207665_10159029 Ga0207665_101590292 292
138 3300030521 Ga0307511_10002065 Ga0307511_100020659 292
139 3300039437 Ga0436365_1080427 Ga0436365_1080427_3041_3991 292
140 3300039450 Ga0436363_0152083 Ga0436363_0152083_156_1088 292
141 3300044673 Ga0453683_0028722 Ga0453683_0028722_1386_2321 292
142 3300050507 nmdc:mga05p37_19377_c1 nmdc:mga05p37_19377_c1_4011_5009 292
143 3300050513 nmdc:mga0rr50_3818_c1 nmdc:mga0rr50_3818_c1_6142_7074 292
144 3300005355 Ga0070671_100094415 Ga0070671_1000944152 294
145 3300021358 Ga0213873_10000001 Ga0213873_10000001105 294
146 3300021384 Ga0213876_10000037 Ga0213876_10000037105 294
147 3300025931 Ga0207644_10244991 Ga0207644_102449912 294
148 3300039437 Ga0436365_0605606 Ga0436365_0605606_14180_15118 294
149 3300039453 Ga0436362_0969073 Ga0436362_0969073_14180_15118 294
150 3300005549 Ga0070704_100037257 Ga0070704_1000372572 295
151 3300006847 Ga0075431_100333814 Ga0075431_1003338142 295
152 3300009094 Ga0111539_10000004 Ga0111539_1000000426 295
153 3300027907 Ga0207428_10000006 Ga0207428_1000000627 295
154 3300050511 nmdc:mga08y16_5_c1 nmdc:mga08y16_5_c1_720549_721490 295
155 3300005295 Ga0065707_10116236 Ga0065707_101162362 296
156 3300006844 Ga0075428_100005813 Ga0075428_1000058135 296
157 3300006847 Ga0075431_100067976 Ga0075431_1000679762 296
158 3300025918 Ga0207662_10116761 Ga0207662_101167611 296
159 3300042876 Ga0451577_0001880 Ga0451577_0001880_305_1252 296
160 3300044712 Ga0453684_0001061 Ga0453684_0001061_579_1526 296
161 3300045051 Ga0451576_0045097 Ga0451576_0045097_3426_4373 296
162 3300049589 Ga0501073_0022479 Ga0501073_0022479_1993_2955 296
163 3300049742 Ga0501080_0035521 Ga0501080_0035521_1894_2856 296
164 3300050510 nmdc:mga06r32_1615_c1 nmdc:mga06r32_1615_c1_465_1409 296

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

39

154

0.98

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

178

267

0.92

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

189

341

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bvj-assembly1.cif.gz_A udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p21) 0.9256 1 289
7bvj-assembly3.cif.gz_C udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p21) 0.9169 1 289
7bvk-assembly2.cif.gz_B udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p212121) 0.9124 1 289
7bvj-assembly1.cif.gz_A udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p21) 0.9014 1 289
7bvj-assembly3.cif.gz_C udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p21) 0.893 1 289
ID Description Score Start End Superfamily
af_P75931_1_120_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.922 1 89 3.40.50.720
3uuwB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9132 1 89 3.40.50.720
af_Q2G1E5_4_119_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9116 4 89 3.40.50.720
3bioA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9102 1 86 3.40.50.720
4hktB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9064 2 89 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6A0IKH8-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9768 2 291 GO:0000166
GO:0016491
AF-A0A7X9PHS1-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9705 99 286
AF-A0A382ITI8-F1-model_v4 Gfo/Idh/MocA-like oxidoreductase N-terminal domain-containing protein 0.969 2 84 GO:0000166
AF-A0A7C7GZF9-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9676 2 229 GO:0000166
GO:0003824
AF-A0A7C7ISH3-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9658 3 195 GO:0000166
GO:0016491

Feature Viewer

pLDDT pTM Quality
90.36 0.87 High
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Predicted Structure (AlphaFold2)

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