F242987

General Info

Members Datasets Scaffolds Average Seq Length
164 104 328 603

Family's Representative Sequence

Representative Sequence 3300005290|Ga0065712_10000238|Ga0065712_100002386
Length 628
Sequence MIVLGISPLDKDATVSLVINGKVVFAAGEERFTRVKLQDGFPEQALRAGVQYAGIRVQDIDIVAYPFFDSQRESQLFTKNICDEKVFLEETPLNGSRQKIESALAKVPTRNIVIPGLGHPNEKMVKPFVNKVFYRLAGAESLLSRNIAKHVSHSWGENTMTYHKAWQEELEENLRELGLLERLRRFDHHVAHAATAFFASGFDRSLVVTLDGYGSGLAGSISVGEGTRIQRLHKLEYPHSLGTFYESVTSSLGFKPSRHEGKIVGLAAYGDPEILLDVILGRFSQEPGSFRILESNNIYFSRYLASLFPKIDVAAAYQRALEIVATNYIRHYVEQTGIDTVVLAGGVIANVKLNQRIFEIPAVKRMFVYPNMGDGGCGTGAALLASRNSLKDREAYTSVYFGPEYSESVIRQELSTAGLRFDYHDPIEPSIARLIHSGRVVARFNGRMEYGPRALGNRSILYRASEPEVNQWLNQRLGRTEFMPFAPVTLNEERHRCYHHVDGAEFAAQFMTVTFDCTDFMKRTCPAAVHVDGTARPQLVTRETNPSLYRILDEYHRLSGIPSVINTSFNMHEEPIVNSPKDAIRAFLQGNLDYLAIGNFLVRHPSQIQREDRQFVTKDDRAGATFNE

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
72 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
73 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
76 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
77 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
78 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
79 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
80 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
81 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
82 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
83 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
84 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
85 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
91 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
92 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
93 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
94 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
95 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
96 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
97 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
98 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
99 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
100 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
101 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
102 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
103 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
104 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.1
Nodule 0
Rhizoplane 0
Rhizosphere 93.29
Stem 0
Stem Tuber 0
Unclassified 11.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10000238 3300005290 Bacteria 30785
2 SwRhRL2b_contig_734031 2162886007 Bacteria 2294
3 MBSR1b_contig_5285603 2162886012 Bacteria 5638
4 rootH2_10008089 3300003320 Bacteria 2196
5 Ga0065704_10006299 3300005289 Bacteria 6620
6 Ga0065715_10000174 3300005293 Bacteria 48416
7 Ga0065707_10004002 3300005295 Bacteria 8304
8 Ga0065707_10091383 3300005295 Bacteria 3957
9 Ga0065707_10095846 3300005295 Unclassified 3331
10 Ga0065707_10118659 3300005295 Bacteria 2180
11 Ga0070670_100033264 3300005331 Bacteria 4441
12 Ga0070670_100041608 3300005331 Bacteria 3949
13 Ga0070670_100109170 3300005331 Unclassified 2384
14 Ga0070689_100004785 3300005340 Bacteria 9183
15 Ga0070675_100004216 3300005354 Bacteria 10931
16 Ga0070675_100008418 3300005354 Bacteria 8005
17 Ga0070675_100057847 3300005354 Bacteria 3197
18 Ga0070671_100017912 3300005355 Bacteria 5745
19 Ga0070708_100028619 3300005445 Bacteria 4797
20 Ga0070708_100035110 3300005445 Bacteria 4367
21 Ga0070678_100051233 3300005456 Bacteria 2991
22 Ga0070662_100056416 3300005457 Bacteria 2852
23 Ga0070685_10003119 3300005466 Bacteria 8426
24 Ga0070706_100001404 3300005467 Bacteria 25465
25 Ga0070706_100002766 3300005467 Bacteria 17531
26 Ga0070706_100010284 3300005467 Bacteria 8694
27 Ga0070707_100010250 3300005468 Bacteria 8726
28 Ga0070698_100081413 3300005471 Bacteria 3232
29 Ga0070697_100000893 3300005536 Bacteria 22432
30 Ga0070672_100115709 3300005543 Bacteria 2190
31 Ga0070704_100029029 3300005549 Unclassified 3687
32 Ga0068859_100016718 3300005617 Bacteria 7365
33 Ga0068859_100042150 3300005617 Bacteria 4584
34 Ga0068859_100053511 3300005617 Bacteria 4060
35 Ga0068862_100002648 3300005844 Bacteria 15753
36 Ga0081455_10007987 3300005937 Bacteria 11063
37 Ga0081538_10025718 3300005981 Bacteria 4141
38 Ga0081539_10000850 3300005985 Bacteria 58405
39 Ga0075365_10010257 3300006038 Bacteria 5444
40 Ga0075364_10004273 3300006051 Bacteria 8204
41 Ga0075362_10001200 3300006177 Bacteria 8145
42 Ga0075367_10003341 3300006178 Bacteria 7624
43 Ga0075366_10022766 3300006195 Bacteria 3648
44 Ga0068871_100041016 3300006358 Unclassified 3710
45 Ga0068871_100046845 3300006358 Bacteria 3484
46 Ga0075428_100001645 3300006844 Bacteria 23778
47 Ga0075428_100007365 3300006844 Bacteria 12198
48 Ga0075428_100010703 3300006844 Bacteria 10194
49 Ga0075428_100113679 3300006844 Bacteria 2950
50 Ga0075428_100136992 3300006844 Bacteria 2661
51 Ga0075430_100018665 3300006846 Bacteria 5903
52 Ga0075430_100020433 3300006846 Bacteria 5633
53 Ga0075430_100064797 3300006846 Bacteria 3070
54 Ga0075431_100011450 3300006847 Bacteria 8939
55 Ga0075431_100103486 3300006847 Bacteria 2939
56 Ga0075433_10018159 3300006852 Bacteria 5842
57 Ga0075434_100001812 3300006871 Bacteria 18462
58 Ga0075434_100026744 3300006871 Bacteria 5657
59 Ga0075429_100000733 3300006880 Bacteria 25737
60 Ga0075429_100045554 3300006880 Unclassified 3816
61 Ga0097620_100016718 3300006931 Bacteria 7365
62 Ga0097620_100042147 3300006931 Bacteria 4584
63 Ga0097620_100053507 3300006931 Bacteria 4060
64 Ga0111539_10000126 3300009094 Bacteria 86123
65 Ga0111539_10002294 3300009094 Bacteria 25457
66 Ga0111539_10013838 3300009094 Bacteria 10085
67 Ga0111539_10035033 3300009094 Bacteria 6079
68 Ga0111539_10038767 3300009094 Bacteria 5748
69 Ga0111539_10043721 3300009094 Bacteria 5369
70 Ga0111539_10083574 3300009094 Unclassified 3754
71 Ga0111539_10095073 3300009094 Bacteria 3501
72 Ga0114129_10000028 3300009147 Bacteria 112185
73 Ga0114129_10003669 3300009147 Bacteria 21600
74 Ga0114129_10014041 3300009147 Bacteria 11409
75 Ga0114129_10034463 3300009147 Bacteria 7150
76 Ga0114129_10145317 3300009147 Unclassified 3249
77 Ga0105248_10152393 3300009177 Unclassified 2608
78 Ga0105237_10048701 3300009545 Bacteria 4259
79 Ga0105249_10021924 3300009553 Bacteria 5721
80 Ga0105249_10146204 3300009553 Bacteria 2271
81 Ga0105028_101332 3300009993 Bacteria 2599
82 Ga0157378_10105343 3300013297 Bacteria 2579
83 Ga0157375_10013995 3300013308 Bacteria 7153
84 Ga0163163_10000019 3300014325 Bacteria 199037
85 Ga0157380_10006844 3300014326 Bacteria 8059
86 Ga0157380_10043473 3300014326 Bacteria 3518
87 Ga0157377_10063598 3300014745 Unclassified 2114
88 Ga0157376_10013999 3300014969 Bacteria 6003
89 Ga0207697_10002833 3300025315 Bacteria 8822
90 Ga0207697_10003073 3300025315 Bacteria 8364
91 Ga0207710_10011997 3300025900 Bacteria 3644
92 Ga0207688_10027282 3300025901 Bacteria 3141
93 Ga0207643_10011973 3300025908 Unclassified 4684
94 Ga0207684_10001216 3300025910 Bacteria 28649
95 Ga0207684_10028423 3300025910 Bacteria 4764
96 Ga0207684_10076561 3300025910 Bacteria 2843
97 Ga0207646_10006298 3300025922 Bacteria 12301
98 Ga0207650_10008081 3300025925 Bacteria 7169
99 Ga0207650_10045520 3300025925 Bacteria 3228
100 Ga0207650_10053508 3300025925 Unclassified 2992
101 Ga0207659_10080001 3300025926 Bacteria 2413
102 Ga0207644_10018173 3300025931 Bacteria 4755
103 Ga0207706_10079171 3300025933 Bacteria 2890
104 Ga0207711_10027578 3300025941 Bacteria 4771
105 Ga0207711_10139799 3300025941 Unclassified 2178
106 Ga0207712_10031846 3300025961 Unclassified 3555
107 Ga0207678_10044985 3300026067 Bacteria 3817
108 Ga0207648_10007726 3300026089 Bacteria 10512
109 Ga0207676_10028789 3300026095 Unclassified 4154
110 Ga0207674_10008455 3300026116 Bacteria 11888
111 Ga0207674_10022642 3300026116 Bacteria 6743
112 Ga0207683_10024815 3300026121 Bacteria 5165
113 Ga0207428_10003270 3300027907 Bacteria 15779
114 Ga0207428_10004631 3300027907 Bacteria 13036
115 Ga0207428_10028961 3300027907 Bacteria 4595
116 Ga0268264_10011593 3300028381 Bacteria 7274
117 Ga0265320_10005010 3300031240 Bacteria 8584
118 Ga0373934_0006843 3300035086 Bacteria 4234
119 Ga0373955_0026741 3300035172 Bacteria 2976
120 Ga0373937_0052075 3300036401 Bacteria 3753
121 Ga0395905_0107723 3300037471 Bacteria 2616
122 Ga0439462_0006198 3300042015 Bacteria 2967
123 Ga0439460_0012003 3300042461 Bacteria 2240
124 Ga0451577_0051967 3300042876 Bacteria 3659
125 Ga0451576_0000060 3300045051 Bacteria 290345
126 Ga0451576_0000449 3300045051 Bacteria 93533
127 Ga0451576_0121420 3300045051 Bacteria 2720
128 Ga0451576_0150870 3300045051 Bacteria 2424
129 Ga0495629_0050503 3300046459 Unclassified 2912
130 Ga0495628_0000013 3300046516 Bacteria 211823
131 Ga0495621_0002697 3300046539 Bacteria 4813
132 Ga0495667_0000501 3300046559 Bacteria 24991
133 Ga0495684_0006875 3300047471 Bacteria 8832
134 Ga0501034_0007649 3300049571 Bacteria 11496
135 Ga0501034_0010494 3300049571 Bacteria 9645
136 Ga0501037_0004792 3300049573 Bacteria 9836
137 Ga0501038_0044941 3300049574 Bacteria 3835
138 Ga0501040_0000054 3300049576 Bacteria 53380
139 Ga0501042_0000588 3300049578 Bacteria 19290
140 Ga0501073_0003829 3300049589 Bacteria 11284
141 Ga0501075_0011567 3300049591 Bacteria 6248
142 Ga0501075_0092963 3300049591 Bacteria 2290
143 Ga0501044_0090269 3300049823 Bacteria 3091
144 nmdc:mga00v17_31368_c1 3300050491 Bacteria 3134
145 nmdc:mga0yw44_70048_c1 3300050492 Bacteria 2174
146 nmdc:mga05p37_120571_c1 3300050507 Unclassified 3222
147 nmdc:mga05p37_143002_c1 3300050507 Bacteria 2930
148 nmdc:mga05p37_53_c1 3300050507 Bacteria 102685
149 nmdc:mga05p37_8630_c1 3300050507 Bacteria 12047
150 nmdc:mga09592_44365_c1 3300050508 Bacteria 3742
151 nmdc:mga06r32_15661_c1 3300050510 Bacteria 6888
152 nmdc:mga06r32_57941_c1 3300050510 Unclassified 3722
153 nmdc:mga08y16_113091_c1 3300050511 Bacteria 2826
154 nmdc:mga08y16_125973_c1 3300050511 Bacteria 2665
155 nmdc:mga08y16_33803_c1 3300050511 Bacteria 5371
156 nmdc:mga08y16_4939_c1 3300050511 Bacteria 13936
157 nmdc:mga08y16_97925_c1 3300050511 Unclassified 3054
158 nmdc:mga0n895_2756_c1 3300050512 Bacteria 13878
159 nmdc:mga0n895_43370_c1 3300050512 Bacteria 4383
160 nmdc:mga0a205_4308_c1 3300050515 Bacteria 12765
161 Ga0500555_000129 3300053103 Bacteria 35970
162 Ga0500616_0000178 3300053153 Bacteria 106208
163 Ga0500645_001286 3300053730 Bacteria 13108
164 Ga0530510_0034908 3300061734 Unclassified 3624
165 Ga0065712_10000238
166 SwRhRL2b_contig_734031
167 MBSR1b_contig_5285603
168 rootH2_10008089
169 Ga0065704_10006299
170 Ga0065715_10000174
171 Ga0065707_10004002
172 Ga0065707_10091383
173 Ga0065707_10095846
174 Ga0065707_10118659
175 Ga0070670_100033264
176 Ga0070670_100041608
177 Ga0070670_100109170
178 Ga0070689_100004785
179 Ga0070675_100004216
180 Ga0070675_100008418
181 Ga0070675_100057847
182 Ga0070671_100017912
183 Ga0070708_100028619
184 Ga0070708_100035110
185 Ga0070678_100051233
186 Ga0070662_100056416
187 Ga0070685_10003119
188 Ga0070706_100001404
189 Ga0070706_100002766
190 Ga0070706_100010284
191 Ga0070707_100010250
192 Ga0070698_100081413
193 Ga0070697_100000893
194 Ga0070672_100115709
195 Ga0070704_100029029
196 Ga0068859_100016718
197 Ga0068859_100042150
198 Ga0068859_100053511
199 Ga0068862_100002648
200 Ga0081455_10007987
201 Ga0081538_10025718
202 Ga0081539_10000850
203 Ga0075365_10010257
204 Ga0075364_10004273
205 Ga0075362_10001200
206 Ga0075367_10003341
207 Ga0075366_10022766
208 Ga0068871_100041016
209 Ga0068871_100046845
210 Ga0075428_100001645
211 Ga0075428_100007365
212 Ga0075428_100010703
213 Ga0075428_100113679
214 Ga0075428_100136992
215 Ga0075430_100018665
216 Ga0075430_100020433
217 Ga0075430_100064797
218 Ga0075431_100011450
219 Ga0075431_100103486
220 Ga0075433_10018159
221 Ga0075434_100001812
222 Ga0075434_100026744
223 Ga0075429_100000733
224 Ga0075429_100045554
225 Ga0097620_100016718
226 Ga0097620_100042147
227 Ga0097620_100053507
228 Ga0111539_10000126
229 Ga0111539_10002294
230 Ga0111539_10013838
231 Ga0111539_10035033
232 Ga0111539_10038767
233 Ga0111539_10043721
234 Ga0111539_10083574
235 Ga0111539_10095073
236 Ga0114129_10000028
237 Ga0114129_10003669
238 Ga0114129_10014041
239 Ga0114129_10034463
240 Ga0114129_10145317
241 Ga0105248_10152393
242 Ga0105237_10048701
243 Ga0105249_10021924
244 Ga0105249_10146204
245 Ga0105028_101332
246 Ga0157378_10105343
247 Ga0157375_10013995
248 Ga0163163_10000019
249 Ga0157380_10006844
250 Ga0157380_10043473
251 Ga0157377_10063598
252 Ga0157376_10013999
253 Ga0207697_10002833
254 Ga0207697_10003073
255 Ga0207710_10011997
256 Ga0207688_10027282
257 Ga0207643_10011973
258 Ga0207684_10001216
259 Ga0207684_10028423
260 Ga0207684_10076561
261 Ga0207646_10006298
262 Ga0207650_10008081
263 Ga0207650_10045520
264 Ga0207650_10053508
265 Ga0207659_10080001
266 Ga0207644_10018173
267 Ga0207706_10079171
268 Ga0207711_10027578
269 Ga0207711_10139799
270 Ga0207712_10031846
271 Ga0207678_10044985
272 Ga0207648_10007726
273 Ga0207676_10028789
274 Ga0207674_10008455
275 Ga0207674_10022642
276 Ga0207683_10024815
277 Ga0207428_10003270
278 Ga0207428_10004631
279 Ga0207428_10028961
280 Ga0268264_10011593
281 Ga0265320_10005010
282 Ga0373934_0006843
283 Ga0373955_0026741
284 Ga0373937_0052075
285 Ga0395905_0107723
286 Ga0439462_0006198
287 Ga0439460_0012003
288 Ga0451577_0051967
289 Ga0451576_0000060
290 Ga0451576_0000449
291 Ga0451576_0121420
292 Ga0451576_0150870
293 Ga0495629_0050503
294 Ga0495628_0000013
295 Ga0495621_0002697
296 Ga0495667_0000501
297 Ga0495684_0006875
298 Ga0501034_0007649
299 Ga0501034_0010494
300 Ga0501037_0004792
301 Ga0501038_0044941
302 Ga0501040_0000054
303 Ga0501042_0000588
304 Ga0501073_0003829
305 Ga0501075_0011567
306 Ga0501075_0092963
307 Ga0501044_0090269
308 nmdc:mga00v17_31368_c1
309 nmdc:mga0yw44_70048_c1
310 nmdc:mga05p37_120571_c1
311 nmdc:mga05p37_143002_c1
312 nmdc:mga05p37_53_c1
313 nmdc:mga05p37_8630_c1
314 nmdc:mga09592_44365_c1
315 nmdc:mga06r32_15661_c1
316 nmdc:mga06r32_57941_c1
317 nmdc:mga08y16_113091_c1
318 nmdc:mga08y16_125973_c1
319 nmdc:mga08y16_33803_c1
320 nmdc:mga08y16_4939_c1
321 nmdc:mga08y16_97925_c1
322 nmdc:mga0n895_2756_c1
323 nmdc:mga0n895_43370_c1
324 nmdc:mga0a205_4308_c1
325 Ga0500555_000129
326 Ga0500616_0000178
327 Ga0500645_001286
328 Ga0530510_0034908

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16861

Carbam_trans_C

Carbamoyltransferase C-terminus

432

604

0.96

PF02543

Carbam_trans_N

Carbamoyltransferase N-terminus

2

383

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vzq-assembly1.cif.gz_A the structure of gdmn v24y/g157a/r158a/g188r mutant in complex with carbamoyl adenylate intermediate 0.8387 1 589
7vzu-assembly1.cif.gz_A the structure of gdmn y82f mutant 0.8363 1 589
7vx0-assembly1.cif.gz_B the structure of gdmn complex with atp 0.8322 1 589
3vez-assembly1.cif.gz_A crystal structure of the o-carbamoyltransferase tobz k443a variant in complex with atp, adp and carbamoyl phosphate 0.8152 1 589
3vex-assembly1.cif.gz_A crystal structure of the o-carbamoyltransferase tobz h14n variant in complex with carbamoyl adenylate intermediate 0.8146 1 589
ID Description Score Start End Superfamily
3vewA03 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9433 382 589 3.90.870.20
af_Q58458_162_374_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9426 174 361 3.30.420.40
3vewA03 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9389 382 589 3.90.870.20
af_Q58451_301_510_3.90.870.20 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9195 382 589 3.90.870.20
af_Q58458_398_606_3.90.870.20 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9188 386 589 3.90.870.20
ID Description Score Start End GO Terms
AF-A0A517MNA3-F1-model_v4 Decarbamoylnovobiocin carbamoyltransferase (EC 2.1.3.12) 0.9718 1 591 GO:0009058
GO:0016740
AF-A0A3M2DM74-F1-model_v4 Carbamoyltransferase 0.9702 156 594 GO:0009058
GO:0016740
AF-A0A2A4XP66-F1-model_v4 deleted 0.9669 1 591
AF-A0A517MNA3-F1-model_v4 Decarbamoylnovobiocin carbamoyltransferase (EC 2.1.3.12) 0.9637 1 591 GO:0009058
GO:0016740
AF-A0A849Y2B8-F1-model_v4 Carbamoyltransferase 0.963 434 589 GO:0016740

Map