F242649

General Info

Members Datasets Scaffolds Average Seq Length
163 137 163 149

Family's Representative Sequence

Representative Sequence 3300053078|Ga0495612_0275140|Ga0495612_0275140_128_658
Length 176
Sequence MSGAPDTVAAVTSASPPTQLHSPPGRAADEEAMALALAEARAAVSHGDVPVGAVTVEGGRVLSRRHNERELQGDPTAHAEVLALQDASRVLGTWRLDSVSLVVSLEPCPMCAGALVAARLARLVFGAADPKAGACGSLYNLCADPRLNHEVEVVPGVRSEESTDLLTSFFADRRTR

Samples

Sample ID Description Type Environment
1 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
86 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
87 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
88 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
89 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
90 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
91 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
92 3300036458 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
93 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
96 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
97 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
98 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
99 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
102 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
103 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
104 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
105 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
106 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
107 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
108 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
109 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
110 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
111 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
112 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
113 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
114 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
115 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
116 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
117 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
125 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
130 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
131 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
132 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
135 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
136 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
137 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.77
Metatranscriptomes 1.23
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.75
Rhizosphere 90.18
Stem 0
Stem Tuber 0
Unclassified 3.07

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10000889 3300002459 Bacteria 6837
2 Ga0070683_100631281 3300005329 Bacteria 1025
3 Ga0070690_100070697 3300005330 Bacteria 2267
4 Ga0070670_100016625 3300005331 Bacteria 6313
5 Ga0070677_10043848 3300005333 Bacteria 1777
6 Ga0070660_100087215 3300005339 Bacteria 2456
7 Ga0070687_100027029 3300005343 Bacteria 2767
8 Ga0070661_100024800 3300005344 Bacteria 4304
9 Ga0070692_10005718 3300005345 Bacteria 5339
10 Ga0070692_10060502 3300005345 Bacteria 1994
11 Ga0070668_100256258 3300005347 Bacteria 1454
12 Ga0070669_100544787 3300005353 Bacteria 967
13 Ga0070675_100410762 3300005354 Bacteria 1209
14 Ga0070675_100793200 3300005354 Bacteria 866
15 Ga0070667_100219082 3300005367 Bacteria 1694
16 Ga0070703_10003052 3300005406 Bacteria 4789
17 Ga0070709_10000069 3300005434 Bacteria 79502
18 Ga0070701_10315484 3300005438 Bacteria 966
19 Ga0070694_100941000 3300005444 Bacteria 715
20 Ga0070708_100011923 3300005445 Bacteria 7081
21 Ga0070708_100233797 3300005445 Bacteria 1725
22 Ga0070681_10031469 3300005458 Bacteria 5327
23 Ga0068867_100004382 3300005459 Bacteria 9934
24 Ga0070706_101141528 3300005467 Bacteria 717
25 Ga0070707_100064213 3300005468 Bacteria 3525
26 Ga0070707_100530195 3300005468 Bacteria 1139
27 Ga0070698_101060303 3300005471 Bacteria 758
28 Ga0070699_101103376 3300005518 Bacteria 728
29 Ga0070684_100213762 3300005535 Bacteria 1758
30 Ga0070697_100060320 3300005536 Bacteria 3091
31 Ga0068853_100171896 3300005539 Bacteria 1961
32 Ga0068853_100774195 3300005539 Bacteria 918
33 Ga0068853_100915787 3300005539 Unclassified 842
34 Ga0070672_100086015 3300005543 Bacteria 2528
35 Ga0070686_100021589 3300005544 Bacteria 3830
36 Ga0070686_100191449 3300005544 Bacteria 1460
37 Ga0070696_100854167 3300005546 Bacteria 752
38 Ga0070704_100800485 3300005549 Bacteria 842
39 Ga0070664_100039634 3300005564 Bacteria 3970
40 Ga0068870_10000948 3300005840 Bacteria 11383
41 Ga0068863_100007731 3300005841 Bacteria 10513
42 Ga0070716_100045805 3300006173 Bacteria 2458
43 Ga0075428_100015381 3300006844 Bacteria 8485
44 Ga0075434_100179304 3300006871 Bacteria 2138
45 Ga0075434_100874984 3300006871 Bacteria 914
46 Ga0075429_100064786 3300006880 Bacteria 3182
47 Ga0105240_10000303 3300009093 Bacteria 95509
48 Ga0111539_10035571 3300009094 Bacteria 6029
49 Ga0114129_10179602 3300009147 Bacteria 2881
50 Ga0114129_10718529 3300009147 Bacteria 1282
51 Ga0105243_10059943 3300009148 Bacteria 3039
52 Ga0105242_10005437 3300009176 Bacteria 9854
53 Ga0105242_10256274 3300009176 Bacteria 1578
54 Ga0105248_10253314 3300009177 Bacteria 1981
55 Ga0105237_10423190 3300009545 Bacteria 1337
56 Ga0105246_10166768 3300011119 Bacteria 1683
57 Ga0105246_10549652 3300011119 Bacteria 989
58 Ga0157369_10109178 3300013105 Bacteria 2942
59 Ga0157369_10434590 3300013105 Bacteria 1360
60 Ga0157378_10746852 3300013297 Bacteria 1001
61 Ga0157372_12091967 3300013307 Bacteria 650
62 Ga0163163_10023549 3300014325 Bacteria 5845
63 Ga0206356_10838164 3300020070 Bacteria 648
64 Ga0213876_10009223 3300021384 Bacteria 5314
65 Ga0207653_10022174 3300025885 Bacteria 2017
66 Ga0207699_10000032 3300025906 Bacteria 137608
67 Ga0207643_10008641 3300025908 Bacteria 5462
68 Ga0207707_10157718 3300025912 Bacteria 1984
69 Ga0207695_10000396 3300025913 Bacteria 98138
70 Ga0207671_10032668 3300025914 Bacteria 3871
71 Ga0207693_11160734 3300025915 Bacteria 584
72 Ga0207660_10697735 3300025917 Bacteria 828
73 Ga0207662_10033276 3300025918 Bacteria 3004
74 Ga0207649_10161998 3300025920 Bacteria 1551
75 Ga0207646_10511997 3300025922 Bacteria 1081
76 Ga0207646_11867141 3300025922 Bacteria 513
77 Ga0207650_10009562 3300025925 Bacteria 6629
78 Ga0207650_10394958 3300025925 Bacteria 1144
79 Ga0207659_10674172 3300025926 Bacteria 884
80 Ga0207687_10014393 3300025927 Bacteria 5175
81 Ga0207644_10108185 3300025931 Bacteria 2099
82 Ga0207690_10035541 3300025932 Bacteria 3219
83 Ga0207686_10272405 3300025934 Bacteria 1246
84 Ga0207704_10018140 3300025938 Bacteria 3667
85 Ga0207665_10694213 3300025939 Bacteria 800
86 Ga0207691_10463300 3300025940 Bacteria 1078
87 Ga0207679_10048156 3300025945 Bacteria 3101
88 Ga0207668_10210399 3300025972 Bacteria 1555
89 Ga0207658_10643388 3300025986 Bacteria 955
90 Ga0207677_10611582 3300026023 Bacteria 957
91 Ga0207639_10008110 3300026041 Bacteria 7180
92 Ga0207639_10423754 3300026041 Bacteria 1204
93 Ga0207641_10101084 3300026088 Bacteria 2540
94 Ga0207648_10066346 3300026089 Bacteria 3147
95 Ga0207674_10018061 3300026116 Bacteria 7681
96 Ga0207675_100027739 3300026118 Bacteria 5275
97 Ga0207698_10333103 3300026142 Bacteria 1426
98 Ga0207428_10013439 3300027907 Bacteria 7151
99 Ga0268265_11109225 3300028380 Bacteria 786
100 Ga0265332_10010668 3300031238 Bacteria 4088
101 Ga0265327_10000119 3300031251 Bacteria 171254
102 Ga0265316_10824233 3300031344 Bacteria 650
103 Ga0307406_10944536 3300031901 Bacteria 737
104 Ga0373940_0122395 3300035088 Bacteria 808
105 Ga0373949_0151410 3300035090 Bacteria 671
106 Ga0373960_0031276 3300035121 Bacteria 1488
107 Ga0310112_046295 3300036458 Bacteria 590
108 Ga0436364_0515979 3300037853 Bacteria 5024
109 Ga0436365_0398569 3300039437 Bacteria 109705
110 Ga0436365_1126215 3300039437 Bacteria 1179
111 Ga0439446_0180939 3300042156 Bacteria 705
112 Ga0439434_0305022 3300042435 Bacteria 551
113 Ga0450901_007486 3300042533 Bacteria 1124
114 Ga0451577_0402730 3300042876 Bacteria 1242
115 Ga0453683_0279150 3300044673 Bacteria 1067
116 Ga0453683_1135432 3300044673 Unclassified 522
117 Ga0453684_0004751 3300044712 Bacteria 28049
118 Ga0453684_0029778 3300044712 Bacteria 7737
119 Ga0451576_0049468 3300045051 Bacteria 4411
120 Ga0451576_0457497 3300045051 Bacteria 1340
121 Ga0451576_0728731 3300045051 Bacteria 1042
122 Ga0451576_0821881 3300045051 Bacteria 976
123 Ga0495605_0109824 3300046474 Bacteria 1260
124 Ga0495585_0029171 3300046492 Bacteria 3142
125 Ga0495583_0049034 3300046506 Bacteria 1936
126 Ga0495583_0248520 3300046506 Bacteria 714
127 Ga0495628_0271120 3300046516 Bacteria 1262
128 Ga0495663_0029402 3300046525 Bacteria 1623
129 Ga0495654_0194784 3300046530 Bacteria 871
130 Ga0495598_0087988 3300046537 Bacteria 1008
131 Ga0495611_0123149 3300046648 Bacteria 1209
132 Ga0495611_0127143 3300046648 Bacteria 1189
133 Ga0495611_0568399 3300046648 Bacteria 513
134 Ga0495659_0023463 3300046664 Bacteria 2097
135 Ga0495657_0255792 3300046675 Bacteria 1053
136 Ga0495646_0433514 3300046680 Bacteria 680
137 Ga0495670_0153962 3300046691 Bacteria 1206
138 Ga0495636_0050477 3300047318 Bacteria 1741
139 Ga0495674_0249839 3300047319 Bacteria 1460
140 Ga0495686_0000035 3300047472 Bacteria 314930
141 Ga0496101_0031601 3300048904 Bacteria 3723
142 Ga0496102_0090542 3300048905 Bacteria 2831
143 Ga0496104_0000076 3300048907 Bacteria 102010
144 Ga0496104_0023521 3300048907 Bacteria 5665
145 Ga0496105_0314957 3300048908 Bacteria 1255
146 Ga0496106_0016250 3300048909 Bacteria 5506
147 Ga0496108_0351603 3300048911 Bacteria 1286
148 Ga0496109_0031280 3300048912 Bacteria 4775
149 Ga0496110_0010484 3300048913 Bacteria 7541
150 Ga0496111_0131451 3300048914 Bacteria 1852
151 Ga0496114_0014631 3300048917 Bacteria 6303
152 Ga0501036_0978961 3300049572 Bacteria 693
153 Ga0501047_0106241 3300049581 Bacteria 2688
154 Ga0501071_0709280 3300049587 Bacteria 775
155 Ga0501081_0647764 3300049743 Bacteria 792
156 nmdc:mga05p37_214790_c1 3300050507 Bacteria 2323
157 nmdc:mga09592_16785_c1 3300050508 Bacteria 5993
158 nmdc:mga09592_838617_c1 3300050508 Bacteria 776
159 nmdc:mga08y16_26937_c1 3300050511 Bacteria 6058
160 nmdc:mga0n895_259519_c1 3300050512 Bacteria 1763
161 Ga0495601_0069083 3300053077 Bacteria 2253
162 Ga0495612_0275140 3300053078 Bacteria 752
163 Ga0495619_0120896 3300053085 Bacteria 1795

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005339 Ga0070660_100087215 Ga0070660_1000872152 141
2 3300005345 Ga0070692_10060502 Ga0070692_100605024 141
3 3300009093 Ga0105240_10000303 Ga0105240_1000030367 141
4 3300025913 Ga0207695_10000396 Ga0207695_1000039674 141
5 3300025932 Ga0207690_10035541 Ga0207690_100355412 141
6 3300002459 JGI24751J29686_10000889 JGI24751J29686_100008896 142
7 3300005329 Ga0070683_100631281 Ga0070683_1006312812 142
8 3300005330 Ga0070690_100070697 Ga0070690_1000706974 142
9 3300005331 Ga0070670_100016625 Ga0070670_1000166252 142
10 3300005333 Ga0070677_10043848 Ga0070677_100438483 142
11 3300005343 Ga0070687_100027029 Ga0070687_1000270293 142
12 3300005344 Ga0070661_100024800 Ga0070661_1000248002 142
13 3300005345 Ga0070692_10005718 Ga0070692_100057183 142
14 3300005347 Ga0070668_100256258 Ga0070668_1002562583 142
15 3300005353 Ga0070669_100544787 Ga0070669_1005447872 142
16 3300005354 Ga0070675_100410762 Ga0070675_1004107622 142
17 3300005354 Ga0070675_100793200 Ga0070675_1007932001 142
18 3300005367 Ga0070667_100219082 Ga0070667_1002190824 142
19 3300005406 Ga0070703_10003052 Ga0070703_100030522 142
20 3300005434 Ga0070709_10000069 Ga0070709_1000006916 142
21 3300005438 Ga0070701_10315484 Ga0070701_103154843 142
22 3300005444 Ga0070694_100941000 Ga0070694_1009410001 142
23 3300005445 Ga0070708_100011923 Ga0070708_1000119232 142
24 3300005445 Ga0070708_100233797 Ga0070708_1002337972 142
25 3300005458 Ga0070681_10031469 Ga0070681_100314695 142
26 3300005459 Ga0068867_100004382 Ga0068867_1000043828 142
27 3300005467 Ga0070706_101141528 Ga0070706_1011415281 142
28 3300005468 Ga0070707_100064213 Ga0070707_1000642132 142
29 3300005468 Ga0070707_100530195 Ga0070707_1005301954 142
30 3300005471 Ga0070698_101060303 Ga0070698_1010603033 142
31 3300005518 Ga0070699_101103376 Ga0070699_1011033761 142
32 3300005535 Ga0070684_100213762 Ga0070684_1002137622 142
33 3300005536 Ga0070697_100060320 Ga0070697_1000603203 142
34 3300005539 Ga0068853_100171896 Ga0068853_1001718963 142
35 3300005539 Ga0068853_100774195 Ga0068853_1007741953 142
36 3300005539 Ga0068853_100915787 Ga0068853_1009157872 142
37 3300005543 Ga0070672_100086015 Ga0070672_1000860155 142
38 3300005544 Ga0070686_100021589 Ga0070686_1000215893 142
39 3300005544 Ga0070686_100191449 Ga0070686_1001914492 142
40 3300005546 Ga0070696_100854167 Ga0070696_1008541672 142
41 3300005549 Ga0070704_100800485 Ga0070704_1008004852 142
42 3300005564 Ga0070664_100039634 Ga0070664_1000396346 142
43 3300005840 Ga0068870_10000948 Ga0068870_100009487 142
44 3300005841 Ga0068863_100007731 Ga0068863_1000077311 142
45 3300006173 Ga0070716_100045805 Ga0070716_1000458052 142
46 3300006844 Ga0075428_100015381 Ga0075428_1000153813 142
47 3300006871 Ga0075434_100179304 Ga0075434_1001793043 142
48 3300006871 Ga0075434_100874984 Ga0075434_1008749842 142
49 3300006880 Ga0075429_100064786 Ga0075429_1000647866 142
50 3300009094 Ga0111539_10035571 Ga0111539_100355715 142
51 3300009147 Ga0114129_10179602 Ga0114129_101796022 142
52 3300009147 Ga0114129_10718529 Ga0114129_107185292 142
53 3300009148 Ga0105243_10059943 Ga0105243_100599432 142
54 3300009176 Ga0105242_10005437 Ga0105242_100054378 142
55 3300009176 Ga0105242_10256274 Ga0105242_102562743 142
56 3300009177 Ga0105248_10253314 Ga0105248_102533143 142
57 3300009545 Ga0105237_10423190 Ga0105237_104231902 142
58 3300011119 Ga0105246_10166768 Ga0105246_101667683 142
59 3300011119 Ga0105246_10549652 Ga0105246_105496521 142
60 3300013105 Ga0157369_10109178 Ga0157369_101091785 142
61 3300013105 Ga0157369_10434590 Ga0157369_104345902 142
62 3300013297 Ga0157378_10746852 Ga0157378_107468522 142
63 3300013307 Ga0157372_12091967 Ga0157372_120919672 142
64 3300014325 Ga0163163_10023549 Ga0163163_100235498 142
65 3300020070 Ga0206356_10838164 Ga0206356_108381641 142
66 3300021384 Ga0213876_10009223 Ga0213876_100092234 142
67 3300025885 Ga0207653_10022174 Ga0207653_100221742 142
68 3300025906 Ga0207699_10000032 Ga0207699_1000003223 142
69 3300025908 Ga0207643_10008641 Ga0207643_100086417 142
70 3300025912 Ga0207707_10157718 Ga0207707_101577182 142
71 3300025914 Ga0207671_10032668 Ga0207671_100326683 142
72 3300025915 Ga0207693_11160734 Ga0207693_111607341 142
73 3300025917 Ga0207660_10697735 Ga0207660_106977352 142
74 3300025918 Ga0207662_10033276 Ga0207662_100332765 142
75 3300025920 Ga0207649_10161998 Ga0207649_101619983 142
76 3300025922 Ga0207646_10511997 Ga0207646_105119971 142
77 3300025922 Ga0207646_11867141 Ga0207646_118671411 142
78 3300025925 Ga0207650_10009562 Ga0207650_100095627 142
79 3300025925 Ga0207650_10394958 Ga0207650_103949581 142
80 3300025926 Ga0207659_10674172 Ga0207659_106741722 142
81 3300025927 Ga0207687_10014393 Ga0207687_100143936 142
82 3300025931 Ga0207644_10108185 Ga0207644_101081854 142
83 3300025934 Ga0207686_10272405 Ga0207686_102724052 142
84 3300025938 Ga0207704_10018140 Ga0207704_100181404 142
85 3300025939 Ga0207665_10694213 Ga0207665_106942132 142
86 3300025940 Ga0207691_10463300 Ga0207691_104633003 142
87 3300025945 Ga0207679_10048156 Ga0207679_100481562 142
88 3300025972 Ga0207668_10210399 Ga0207668_102103991 142
89 3300025986 Ga0207658_10643388 Ga0207658_106433882 142
90 3300026023 Ga0207677_10611582 Ga0207677_106115822 142
91 3300026041 Ga0207639_10008110 Ga0207639_100081102 142
92 3300026041 Ga0207639_10423754 Ga0207639_104237544 142
93 3300026088 Ga0207641_10101084 Ga0207641_101010842 142
94 3300026089 Ga0207648_10066346 Ga0207648_100663464 142
95 3300026116 Ga0207674_10018061 Ga0207674_100180616 142
96 3300026118 Ga0207675_100027739 Ga0207675_1000277394 142
97 3300026142 Ga0207698_10333103 Ga0207698_103331032 142
98 3300027907 Ga0207428_10013439 Ga0207428_100134394 142
99 3300028380 Ga0268265_11109225 Ga0268265_111092252 142
100 3300031238 Ga0265332_10010668 Ga0265332_100106684 142
101 3300031251 Ga0265327_10000119 Ga0265327_10000119117 142
102 3300031344 Ga0265316_10824233 Ga0265316_108242331 142
103 3300031901 Ga0307406_10944536 Ga0307406_109445362 142
104 3300035088 Ga0373940_0122395 Ga0373940_0122395_106_534 142
105 3300035090 Ga0373949_0151410 Ga0373949_0151410_141_569 142
106 3300035121 Ga0373960_0031276 Ga0373960_0031276_197_625 142
107 3300036458 Ga0310112_046295 Ga0310112_046295_56_559 142
108 3300037853 Ga0436364_0515979 Ga0436364_0515979_3109_3546 142
109 3300039437 Ga0436365_0398569 Ga0436365_0398569_51102_51536 142
110 3300039437 Ga0436365_1126215 Ga0436365_1126215_66_533 142
111 3300042156 Ga0439446_0180939 Ga0439446_0180939_111_578 142
112 3300042435 Ga0439434_0305022 Ga0439434_0305022_25_492 142
113 3300042533 Ga0450901_007486 Ga0450901_007486_418_867 142
114 3300042876 Ga0451577_0402730 Ga0451577_0402730_604_1092 142
115 3300044673 Ga0453683_0279150 Ga0453683_0279150_375_803 142
116 3300044673 Ga0453683_1135432 Ga0453683_1135432_13_471 142
117 3300044712 Ga0453684_0004751 Ga0453684_0004751_24232_24687 142
118 3300044712 Ga0453684_0029778 Ga0453684_0029778_5969_6493 142
119 3300045051 Ga0451576_0049468 Ga0451576_0049468_1476_1907 142
120 3300045051 Ga0451576_0457497 Ga0451576_0457497_789_1277 142
121 3300045051 Ga0451576_0728731 Ga0451576_0728731_500_928 142
122 3300045051 Ga0451576_0821881 Ga0451576_0821881_66_512 142
123 3300046474 Ga0495605_0109824 Ga0495605_0109824_159_587 142
124 3300046492 Ga0495585_0029171 Ga0495585_0029171_2030_2458 142
125 3300046506 Ga0495583_0049034 Ga0495583_0049034_544_1011 142
126 3300046506 Ga0495583_0248520 Ga0495583_0248520_10_438 142
127 3300046516 Ga0495628_0271120 Ga0495628_0271120_695_1129 142
128 3300046525 Ga0495663_0029402 Ga0495663_0029402_163_591 142
129 3300046530 Ga0495654_0194784 Ga0495654_0194784_71_499 142
130 3300046537 Ga0495598_0087988 Ga0495598_0087988_41_469 142
131 3300046648 Ga0495611_0123149 Ga0495611_0123149_687_1115 142
132 3300046648 Ga0495611_0127143 Ga0495611_0127143_649_1077 142
133 3300046648 Ga0495611_0568399 Ga0495611_0568399_48_476 142
134 3300046664 Ga0495659_0023463 Ga0495659_0023463_1423_1896 142
135 3300046675 Ga0495657_0255792 Ga0495657_0255792_199_672 142
136 3300046680 Ga0495646_0433514 Ga0495646_0433514_208_642 142
137 3300046691 Ga0495670_0153962 Ga0495670_0153962_127_555 142
138 3300047318 Ga0495636_0050477 Ga0495636_0050477_1155_1583 142
139 3300047319 Ga0495674_0249839 Ga0495674_0249839_760_1194 142
140 3300047472 Ga0495686_0000035 Ga0495686_0000035_235041_235487 142
141 3300048904 Ga0496101_0031601 Ga0496101_0031601_479_925 142
142 3300048905 Ga0496102_0090542 Ga0496102_0090542_2072_2518 142
143 3300048907 Ga0496104_0000076 Ga0496104_0000076_51099_51545 142
144 3300048907 Ga0496104_0023521 Ga0496104_0023521_4992_5438 142
145 3300048908 Ga0496105_0314957 Ga0496105_0314957_741_1187 142
146 3300048909 Ga0496106_0016250 Ga0496106_0016250_4933_5379 142
147 3300048911 Ga0496108_0351603 Ga0496108_0351603_760_1188 142
148 3300048912 Ga0496109_0031280 Ga0496109_0031280_3578_4006 142
149 3300048913 Ga0496110_0010484 Ga0496110_0010484_2320_2766 142
150 3300048914 Ga0496111_0131451 Ga0496111_0131451_835_1281 142
151 3300048917 Ga0496114_0014631 Ga0496114_0014631_2833_3279 142
152 3300049572 Ga0501036_0978961 Ga0501036_0978961_21_518 142
153 3300049581 Ga0501047_0106241 Ga0501047_0106241_1139_1621 142
154 3300049587 Ga0501071_0709280 Ga0501071_0709280_269_760 142
155 3300049743 Ga0501081_0647764 Ga0501081_0647764_222_674 142
156 3300050507 nmdc:mga05p37_214790_c1 nmdc:mga05p37_214790_c1_750_1205 142
157 3300050508 nmdc:mga09592_16785_c1 nmdc:mga09592_16785_c1_917_1372 142
158 3300050508 nmdc:mga09592_838617_c1 nmdc:mga09592_838617_c1_189_680 142
159 3300050511 nmdc:mga08y16_26937_c1 nmdc:mga08y16_26937_c1_3907_4362 142
160 3300050512 nmdc:mga0n895_259519_c1 nmdc:mga0n895_259519_c1_35_487 142
161 3300053077 Ga0495601_0069083 Ga0495601_0069083_1316_1750 142
162 3300053078 Ga0495612_0275140 Ga0495612_0275140_128_658 142
163 3300053085 Ga0495619_0120896 Ga0495619_0120896_1255_1728 142

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00383

dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

26

127

0.97

PF14437

MafB19-deam

MafB19-like deaminase

27

174

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cph-assembly1.cif.gz_A crystal structure of trna adenosine deaminase from bacillus subtilis 0.9939 2 142
2b3j-assembly2.cif.gz_D crystal structure of staphylococcus aureus trna adenosine deaminase, tada, in complex with rna 0.9933 2 142
1z3a-assembly1.cif.gz_B crystal structure of trna adenosine deaminase tada from escherichia coli 0.9916 2 142
3ocq-assembly1.cif.gz_A-2 crystal structure of trna-specific adenosine deaminase from salmonella enterica 0.9908 1 139
8e2q-assembly2.cif.gz_C crystal structure of tadac-1.17 in a complex with ssdna 0.9899 1 139
ID Description Score Start End Superfamily
2b3jA00 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.993 2 142 3.40.140.10
1z3aA00 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.992 2 142 3.40.140.10
2nx8A00 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9897 2 142 3.40.140.10
2b3jA00 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9791 2 142 3.40.140.10
1wwrD00 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9785 2 142 3.40.140.10
ID Description Score Start End GO Terms
AF-A0A7C1QN25-F1-model_v4 deleted 1.001 2 142
AF-A0A1F2RE18-F1-model_v4 tRNA-specific adenosine deaminase (EC 3.5.4.33) 1.001 2 142 GO:0002100
GO:0008270
GO:0052717
AF-A0A7V5W6J5-F1-model_v4 tRNA-specific adenosine deaminase (EC 3.5.4.33) 1.001 2 142 GO:0002100
GO:0008270
GO:0052717
AF-A0A1Q7Y6L0-F1-model_v4 tRNA-specific adenosine deaminase (EC 3.5.4.33) 1.001 2 142 GO:0002100
GO:0008270
GO:0052717
AF-A0A2E0ARD5-F1-model_v4 deleted 1 2 142

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pLDDT pTM Quality
97.4 0.92 High
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Predicted Structure (AlphaFold2)

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