F240251

General Info

Members Datasets Scaffolds Average Seq Length
162 136 152 218

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0000643|Ga0501032_0000643_445_1221
Length 258
Sequence LTENDNRVGAGVRVAVLLFCVNDVGIGLSGSSWAQSMGETIMTPTITAFEASPDRGQGLARDTRVRWALEEVGQLYDVRLVSFKAMKEPAHLALNPFGQIPTYEEGGLALFETGSILLHIAEQHDGLLPKDANARARAITWMFAAVNTVETPIIELQNAKLLESDKPWAKERMLLVAERVRVRLQQLSARLGGADWLDGAFSVGDLMMVHVLQRLKPSGLLGEYPNLAAYVARAEARPAFQRAFAAQLAVFEGRKAGG

Samples

Sample ID Description Type Environment
1 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
2 2643221577 Rhodanobacter sp. Root627 Isolate Unclassified
3 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
4 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
5 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
6 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
7 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
8 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
9 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
10 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
11 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
12 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
17 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
18 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
19 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
22 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
54 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
57 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
58 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
60 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
92 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
93 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
96 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
97 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
100 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
101 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
102 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
103 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
104 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
108 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
109 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
114 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
115 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
116 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
117 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
118 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
119 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
122 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
123 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
124 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
125 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
126 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
127 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
128 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
129 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
130 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
131 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
132 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
133 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
134 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
135 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
136 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.59
Metatranscriptomes 1.23
Isolates 6.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.35
Nodule 0.62
Rhizoplane 3.09
Rhizosphere 72.84
Stem 0
Stem Tuber 0
Unclassified 11.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24750J21931_1000205 3300002070 Bacteria 9992
2 JGI24034J26672_10000062 3300002239 Bacteria 39742
3 rootH1_10024866 3300003323 Bacteria 3682
4 Ga0055530_10000040 3300003791 Bacteria 114823
5 Ga0055530_10000058 3300003791 Bacteria 97066
6 Ga0055531_10000009 3300003794 Bacteria 210399
7 Ga0070676_10285728 3300005328 Bacteria 1113
8 Ga0070690_100000009 3300005330 Bacteria 112447
9 Ga0070677_10000121 3300005333 Bacteria 26015
10 Ga0070666_10000006 3300005335 Bacteria 319173
11 Ga0070660_100029918 3300005339 Bacteria 4083
12 Ga0070692_10553363 3300005345 Bacteria 754
13 Ga0070668_100268140 3300005347 Bacteria 1422
14 Ga0070659_100023935 3300005366 Bacteria 4678
15 Ga0070659_100174460 3300005366 Bacteria 1762
16 Ga0070659_100283016 3300005366 Bacteria 1380
17 Ga0070667_100855415 3300005367 Bacteria 845
18 Ga0070701_10229104 3300005438 Bacteria 1112
19 Ga0070663_100008304 3300005455 Bacteria 6379
20 Ga0070681_10001805 3300005458 Bacteria 19258
21 Ga0068867_100516740 3300005459 Bacteria 1029
22 Ga0070679_100016211 3300005530 Bacteria 7178
23 Ga0068853_100026753 3300005539 Bacteria 4845
24 Ga0070686_100000613 3300005544 Bacteria 20961
25 Ga0070665_100011745 3300005548 Bacteria 8844
26 Ga0068855_100014428 3300005563 Bacteria 9513
27 Ga0068855_100276436 3300005563 Bacteria 1866
28 Ga0068854_100013791 3300005578 Bacteria 5314
29 Ga0068864_100002057 3300005618 Bacteria 16611
30 Ga0068861_100168580 3300005719 Bacteria 1813
31 Ga0068851_10259421 3300005834 Bacteria 988
32 Ga0068860_100000014 3300005843 Bacteria 319437
33 Ga0068862_100002017 3300005844 Bacteria 18431
34 Ga0097620_101621426 3300006931 Bacteria 714
35 Ga0105240_10101399 3300009093 Bacteria 3501
36 Ga0105240_10243676 3300009093 Bacteria 2083
37 Ga0105241_10627642 3300009174 Bacteria 974
38 Ga0105242_10308638 3300009176 Bacteria 1447
39 Ga0105237_10000163 3300009545 Bacteria 94679
40 Ga0105238_10004368 3300009551 Bacteria 14023
41 Ga0105249_10000035 3300009553 Bacteria 201325
42 Ga0157373_10021525 3300013100 Bacteria 4683
43 Ga0157373_10304830 3300013100 Bacteria 1131
44 Ga0157371_10006554 3300013102 Bacteria 9574
45 Ga0157371_10422938 3300013102 Bacteria 977
46 Ga0157370_10006992 3300013104 Bacteria 12321
47 Ga0163162_10524745 3300013306 Bacteria 1314
48 Ga0157372_10044895 3300013307 Bacteria 4898
49 Ga0157372_10092521 3300013307 Bacteria 3440
50 Ga0157379_10345650 3300014968 Bacteria 1361
51 Ga0182006_1071672 3300015261 Bacteria 1283
52 Ga0206356_10433895 3300020070 Bacteria 2519
53 Ga0206353_10104577 3300020082 Bacteria 729
54 Ga0213876_10003872 3300021384 Bacteria 8458
55 Ga0209026_1000158 3300025250 Bacteria 106333
56 Ga0209455_1000218 3300025272 Bacteria 79966
57 Ga0209758_1037126 3300025297 Bacteria 1888
58 Ga0209050_1000014 3300025298 Bacteria 774327
59 Ga0209257_1000019 3300025304 Bacteria 774261
60 Ga0207680_10000011 3300025903 Bacteria 391225
61 Ga0207645_10259656 3300025907 Bacteria 1151
62 Ga0207654_10341817 3300025911 Bacteria 1028
63 Ga0207707_10000215 3300025912 Bacteria 61846
64 Ga0207695_10000634 3300025913 Bacteria 70325
65 Ga0207671_10011863 3300025914 Bacteria 7053
66 Ga0207660_10002134 3300025917 Bacteria 13125
67 Ga0207657_10038864 3300025919 Bacteria 4231
68 Ga0207649_10000948 3300025920 Bacteria 18089
69 Ga0207652_10000956 3300025921 Bacteria 27067
70 Ga0207652_10113518 3300025921 Bacteria 2405
71 Ga0207694_10025994 3300025924 Bacteria 4451
72 Ga0207650_10012848 3300025925 Bacteria 5785
73 Ga0207687_10079937 3300025927 Bacteria 2358
74 Ga0207644_10002385 3300025931 Bacteria 12129
75 Ga0207644_10009542 3300025931 Bacteria 6373
76 Ga0207690_10002276 3300025932 Bacteria 11703
77 Ga0207690_10049351 3300025932 Bacteria 2805
78 Ga0207690_10447942 3300025932 Bacteria 1037
79 Ga0207706_10011786 3300025933 Bacteria 7961
80 Ga0207667_10018069 3300025949 Bacteria 7918
81 Ga0207667_10036873 3300025949 Bacteria 5234
82 Ga0207667_10149360 3300025949 Bacteria 2405
83 Ga0207712_10000013 3300025961 Bacteria 391208
84 Ga0207668_10168325 3300025972 Bacteria 1716
85 Ga0207640_10069729 3300025981 Bacteria 2362
86 Ga0207640_11115109 3300025981 Bacteria 698
87 Ga0207658_10003628 3300025986 Bacteria 10901
88 Ga0207639_10466090 3300026041 Bacteria 1149
89 Ga0207678_10007702 3300026067 Bacteria 9514
90 Ga0207678_10059056 3300026067 Bacteria 3300
91 Ga0207648_10419800 3300026089 Bacteria 1214
92 Ga0207676_10001690 3300026095 Bacteria 16285
93 Ga0207675_100174582 3300026118 Bacteria 2056
94 Ga0268266_10069588 3300028379 Bacteria 3049
95 Ga0268266_10484574 3300028379 Bacteria 1179
96 Ga0268265_10000992 3300028380 Bacteria 25768
97 Ga0268264_10000037 3300028381 Bacteria 391116
98 Ga0307513_10223049 3300031456 Bacteria 1704
99 Ga0307509_10116323 3300031507 Bacteria 2664
100 Ga0307411_10324623 3300032005 Bacteria 1244
101 Ga0307415_100380793 3300032126 Bacteria 1198
102 Ga0307510_10285419 3300033180 Bacteria 1119
103 Ga0373962_0041230 3300035242 Bacteria 1301
104 Ga0373931_0299033 3300035691 Bacteria 993
105 Ga0436365_1189040 3300039437 Bacteria 29791
106 Ga0495622_0051123 3300046557 Bacteria 1917
107 Ga0495622_0179795 3300046557 Bacteria 949
108 Ga0495625_0000615 3300046660 Bacteria 51688
109 Ga0495635_0011391 3300046663 Bacteria 6237
110 Ga0495686_0000007 3300047472 Bacteria 732622
111 Ga0495686_0198139 3300047472 Bacteria 1154
112 Ga0496101_0335597 3300048904 Bacteria 1187
113 Ga0496101_0843147 3300048904 Bacteria 722
114 Ga0496102_0002106 3300048905 Bacteria 17108
115 Ga0496104_0115346 3300048907 Bacteria 2577
116 Ga0496105_0322635 3300048908 Bacteria 1237
117 Ga0496117_0003096 3300048920 Bacteria 19916
118 Ga0496118_0010067 3300048921 Bacteria 9415
119 Ga0496118_0187988 3300048921 Bacteria 1239
120 Ga0501032_0000643 3300049569 Bacteria 28374
121 Ga0501033_0295604 3300049570 Bacteria 1141
122 Ga0501037_0019749 3300049573 Bacteria 4972
123 Ga0501047_0043967 3300049581 Bacteria 4314
124 Ga0501047_0074431 3300049581 Bacteria 3270
125 Ga0501067_0000401 3300049583 Bacteria 23635
126 Ga0501068_0000152 3300049584 Bacteria 31915
127 Ga0501069_0224051 3300049585 Bacteria 1094
128 Ga0501073_0000007 3300049589 Bacteria 227229
129 Ga0501077_0000063 3300049593 Bacteria 53959
130 Ga0501077_0121093 3300049593 Bacteria 1658
131 Ga0501224_009515 3300049664 Bacteria 1423
132 Ga0501249_000279 3300049679 Bacteria 14699
133 Ga0501080_0003376 3300049742 Bacteria 14079
134 Ga0501080_0003554 3300049742 Bacteria 13729
135 Ga0501083_0097406 3300049744 Bacteria 1941
136 Ga0501044_0003627 3300049823 Bacteria 17369
137 Ga0501044_0353961 3300049823 Bacteria 1387
138 Ga0500643_040040 3300053087 Bacteria 1381
139 Ga0500647_0071272 3300053091 Bacteria 1670
140 Ga0500651_0242781 3300053093 Bacteria 1050
141 Ga0500556_0009591 3300053104 Bacteria 2818
142 Ga0500569_008398 3300053109 Bacteria 2360
143 Ga0500618_012883 3300053125 Bacteria 2177
144 Ga0500622_0003414 3300053156 Bacteria 10663
145 Ga0500627_0031982 3300053158 Bacteria 2214
146 Ga0500634_0000015 3300053161 Bacteria 113039
147 Ga0500634_0082840 3300053161 Bacteria 1648
148 Ga0500638_107456 3300053162 Bacteria 1293
149 Ga0500645_009777 3300053730 Bacteria 3208
150 Ga0501084_0342621 3300054114 Bacteria 1262
151 Ga0500661_012542 3300055283 Bacteria 1530
152 Ga0501082_0043618 3300060353 Bacteria 3867

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300013100 Ga0157373_10304830 Ga0157373_103048301 206
2 3300003791 Ga0055530_10000040 Ga0055530_1000004047 208
3 3300003791 Ga0055530_10000058 Ga0055530_100000586 208
4 3300003794 Ga0055531_10000009 Ga0055531_10000009141 208
5 3300025298 Ga0209050_1000014 Ga0209050_1000014302 208
6 3300025304 Ga0209257_1000019 Ga0209257_1000019390 208
7 3300005834 Ga0068851_10259421 Ga0068851_102594212 211
8 3300025921 Ga0207652_10113518 Ga0207652_101135184 211
9 3300053158 Ga0500627_0031982 Ga0500627_0031982_983_1636 211
10 iso_pu_bacteria 2824600985 2824607544 211
11 iso_pu_bacteria 2824609381 2824617059 211
12 3300003323 rootH1_10024866 rootH1_100248663 212
13 3300053161 Ga0500634_0000015 Ga0500634_0000015_30465_31103 212
14 iso_pu_bacteria 2511231027 2511389233 212
15 iso_pu_bacteria 2824704595 2824712082 212
16 iso_pu_bacteria 2824753945 2824761480 212
17 iso_pu_bacteria 2824763712 2824771357 212
18 iso_pu_bacteria 2841957949 2841961941 212
19 iso_pu_bacteria 2842871566 2842873159 212
20 iso_pu_bacteria 2904711408 2904719301 212
21 3300025920 Ga0207649_10000948 Ga0207649_100009482 213
22 iso_pu_bacteria 2643221577 2643894808 213
23 3300032005 Ga0307411_10324623 Ga0307411_103246231 214
24 3300049585 Ga0501069_0224051 Ga0501069_0224051_100_744 214
25 3300053093 Ga0500651_0242781 Ga0500651_0242781_223_897 214
26 3300005328 Ga0070676_10285728 Ga0070676_102857281 215
27 3300005438 Ga0070701_10229104 Ga0070701_102291042 215
28 3300005459 Ga0068867_100516740 Ga0068867_1005167401 215
29 3300005548 Ga0070665_100011745 Ga0070665_1000117456 215
30 3300006931 Ga0097620_101621426 Ga0097620_1016214261 215
31 3300009176 Ga0105242_10308638 Ga0105242_103086382 215
32 3300014968 Ga0157379_10345650 Ga0157379_103456501 215
33 3300025297 Ga0209758_1037126 Ga0209758_10371262 215
34 3300025907 Ga0207645_10259656 Ga0207645_102596562 215
35 3300026089 Ga0207648_10419800 Ga0207648_104198001 215
36 3300028379 Ga0268266_10069588 Ga0268266_100695884 215
37 3300031456 Ga0307513_10223049 Ga0307513_102230493 215
38 3300033180 Ga0307510_10285419 Ga0307510_102854191 215
39 3300046557 Ga0495622_0051123 Ga0495622_0051123_1234_1881 215
40 3300046663 Ga0495635_0011391 Ga0495635_0011391_3260_3907 215
41 3300048904 Ga0496101_0843147 Ga0496101_0843147_20_667 215
42 3300048907 Ga0496104_0115346 Ga0496104_0115346_1500_2147 215
43 3300048908 Ga0496105_0322635 Ga0496105_0322635_187_834 215
44 3300048921 Ga0496118_0187988 Ga0496118_0187988_290_937 215
45 3300049742 Ga0501080_0003376 Ga0501080_0003376_7231_7884 215
46 3300053109 Ga0500569_008398 Ga0500569_008398_165_824 215
47 3300055283 Ga0500661_012542 Ga0500661_012542_69_716 215
48 3300060353 Ga0501082_0043618 Ga0501082_0043618_2210_2863 215
49 3300005345 Ga0070692_10553363 Ga0070692_105533631 216
50 3300046660 Ga0495625_0000615 Ga0495625_0000615_15960_16610 216
51 3300047472 Ga0495686_0198139 Ga0495686_0198139_238_888 216
52 3300049570 Ga0501033_0295604 Ga0501033_0295604_82_732 216
53 3300049581 Ga0501047_0043967 Ga0501047_0043967_153_818 216
54 3300053091 Ga0500647_0071272 Ga0500647_0071272_195_845 216
55 3300053125 Ga0500618_012883 Ga0500618_012883_835_1485 216
56 3300053162 Ga0500638_107456 Ga0500638_107456_441_1091 216
57 3300002070 JGI24750J21931_1000205 JGI24750J21931_10002057 217
58 3300002239 JGI24034J26672_10000062 JGI24034J26672_1000006229 217
59 3300005330 Ga0070690_100000009 Ga0070690_10000000913 217
60 3300005333 Ga0070677_10000121 Ga0070677_1000012127 217
61 3300005335 Ga0070666_10000006 Ga0070666_10000006217 217
62 3300005339 Ga0070660_100029918 Ga0070660_1000299184 217
63 3300005347 Ga0070668_100268140 Ga0070668_1002681402 217
64 3300005366 Ga0070659_100023935 Ga0070659_1000239352 217
65 3300005366 Ga0070659_100174460 Ga0070659_1001744602 217
66 3300005366 Ga0070659_100283016 Ga0070659_1002830162 217
67 3300005367 Ga0070667_100855415 Ga0070667_1008554151 217
68 3300005455 Ga0070663_100008304 Ga0070663_1000083046 217
69 3300005458 Ga0070681_10001805 Ga0070681_100018052 217
70 3300005530 Ga0070679_100016211 Ga0070679_1000162118 217
71 3300005539 Ga0068853_100026753 Ga0068853_1000267536 217
72 3300005544 Ga0070686_100000613 Ga0070686_10000061313 217
73 3300005563 Ga0068855_100014428 Ga0068855_1000144282 217
74 3300005563 Ga0068855_100276436 Ga0068855_1002764363 217
75 3300005578 Ga0068854_100013791 Ga0068854_1000137914 217
76 3300005618 Ga0068864_100002057 Ga0068864_10000205723 217
77 3300005719 Ga0068861_100168580 Ga0068861_1001685803 217
78 3300005843 Ga0068860_100000014 Ga0068860_100000014216 217
79 3300005844 Ga0068862_100002017 Ga0068862_10000201717 217
80 3300009093 Ga0105240_10101399 Ga0105240_101013996 217
81 3300009093 Ga0105240_10243676 Ga0105240_102436763 217
82 3300009174 Ga0105241_10627642 Ga0105241_106276421 217
83 3300009545 Ga0105237_10000163 Ga0105237_1000016336 217
84 3300009551 Ga0105238_10004368 Ga0105238_100043689 217
85 3300009553 Ga0105249_10000035 Ga0105249_10000035117 217
86 3300013100 Ga0157373_10021525 Ga0157373_100215257 217
87 3300013102 Ga0157371_10006554 Ga0157371_100065544 217
88 3300013102 Ga0157371_10422938 Ga0157371_104229382 217
89 3300013104 Ga0157370_10006992 Ga0157370_1000699213 217
90 3300013306 Ga0163162_10524745 Ga0163162_105247451 217
91 3300013307 Ga0157372_10044895 Ga0157372_100448956 217
92 3300013307 Ga0157372_10092521 Ga0157372_100925214 217
93 3300015261 Ga0182006_1071672 Ga0182006_10716722 217
94 3300020070 Ga0206356_10433895 Ga0206356_104338954 217
95 3300020082 Ga0206353_10104577 Ga0206353_101045771 217
96 3300021384 Ga0213876_10003872 Ga0213876_100038724 217
97 3300025250 Ga0209026_1000158 Ga0209026_100015881 217
98 3300025272 Ga0209455_1000218 Ga0209455_100021833 217
99 3300025903 Ga0207680_10000011 Ga0207680_10000011213 217
100 3300025911 Ga0207654_10341817 Ga0207654_103418171 217
101 3300025912 Ga0207707_10000215 Ga0207707_1000021533 217
102 3300025913 Ga0207695_10000634 Ga0207695_1000063416 217
103 3300025914 Ga0207671_10011863 Ga0207671_100118632 217
104 3300025917 Ga0207660_10002134 Ga0207660_100021344 217
105 3300025919 Ga0207657_10038864 Ga0207657_100388644 217
106 3300025921 Ga0207652_10000956 Ga0207652_1000095612 217
107 3300025924 Ga0207694_10025994 Ga0207694_100259943 217
108 3300025925 Ga0207650_10012848 Ga0207650_100128485 217
109 3300025927 Ga0207687_10079937 Ga0207687_100799372 217
110 3300025931 Ga0207644_10002385 Ga0207644_100023855 217
111 3300025931 Ga0207644_10009542 Ga0207644_100095423 217
112 3300025932 Ga0207690_10002276 Ga0207690_100022762 217
113 3300025932 Ga0207690_10049351 Ga0207690_100493512 217
114 3300025932 Ga0207690_10447942 Ga0207690_104479422 217
115 3300025933 Ga0207706_10011786 Ga0207706_100117868 217
116 3300025949 Ga0207667_10018069 Ga0207667_100180691 217
117 3300025949 Ga0207667_10036873 Ga0207667_100368731 217
118 3300025949 Ga0207667_10149360 Ga0207667_101493602 217
119 3300025961 Ga0207712_10000013 Ga0207712_10000013213 217
120 3300025972 Ga0207668_10168325 Ga0207668_101683252 217
121 3300025981 Ga0207640_10069729 Ga0207640_100697293 217
122 3300025981 Ga0207640_11115109 Ga0207640_111151091 217
123 3300025986 Ga0207658_10003628 Ga0207658_100036284 217
124 3300026041 Ga0207639_10466090 Ga0207639_104660902 217
125 3300026067 Ga0207678_10007702 Ga0207678_100077025 217
126 3300026067 Ga0207678_10059056 Ga0207678_100590561 217
127 3300026095 Ga0207676_10001690 Ga0207676_1000169011 217
128 3300026118 Ga0207675_100174582 Ga0207675_1001745821 217
129 3300028379 Ga0268266_10484574 Ga0268266_104845741 217
130 3300028380 Ga0268265_10000992 Ga0268265_100009928 217
131 3300028381 Ga0268264_10000037 Ga0268264_10000037213 217
132 3300031507 Ga0307509_10116323 Ga0307509_101163232 217
133 3300032126 Ga0307415_100380793 Ga0307415_1003807932 217
134 3300035242 Ga0373962_0041230 Ga0373962_0041230_170_826 217
135 3300035691 Ga0373931_0299033 Ga0373931_0299033_31_687 217
136 3300039437 Ga0436365_1189040 Ga0436365_1189040_1507_2160 217
137 3300046557 Ga0495622_0179795 Ga0495622_0179795_72_725 217
138 3300047472 Ga0495686_0000007 Ga0495686_0000007_608396_609049 217
139 3300048904 Ga0496101_0335597 Ga0496101_0335597_500_1153 217
140 3300048905 Ga0496102_0002106 Ga0496102_0002106_15859_16515 217
141 3300048920 Ga0496117_0003096 Ga0496117_0003096_12509_13192 217
142 3300048921 Ga0496118_0010067 Ga0496118_0010067_5152_5835 217
143 3300049569 Ga0501032_0000643 Ga0501032_0000643_445_1221 217
144 3300049573 Ga0501037_0019749 Ga0501037_0019749_162_938 217
145 3300049581 Ga0501047_0074431 Ga0501047_0074431_1002_1658 217
146 3300049583 Ga0501067_0000401 Ga0501067_0000401_19075_19851 217
147 3300049584 Ga0501068_0000152 Ga0501068_0000152_22634_23410 217
148 3300049589 Ga0501073_0000007 Ga0501073_0000007_153129_153905 217
149 3300049593 Ga0501077_0000063 Ga0501077_0000063_25943_26719 217
150 3300049593 Ga0501077_0121093 Ga0501077_0121093_604_1260 217
151 3300049664 Ga0501224_009515 Ga0501224_009515_452_1111 217
152 3300049679 Ga0501249_000279 Ga0501249_000279_4980_5639 217
153 3300049742 Ga0501080_0003554 Ga0501080_0003554_11365_12141 217
154 3300049744 Ga0501083_0097406 Ga0501083_0097406_1095_1871 217
155 3300049823 Ga0501044_0003627 Ga0501044_0003627_3964_4617 217
156 3300049823 Ga0501044_0353961 Ga0501044_0353961_724_1377 217
157 3300053087 Ga0500643_040040 Ga0500643_040040_639_1295 217
158 3300053104 Ga0500556_0009591 Ga0500556_0009591_531_1190 217
159 3300053156 Ga0500622_0003414 Ga0500622_0003414_2235_2897 217
160 3300053161 Ga0500634_0082840 Ga0500634_0082840_163_816 217
161 3300053730 Ga0500645_009777 Ga0500645_009777_1559_2218 217
162 3300054114 Ga0501084_0342621 Ga0501084_0342621_211_864 217

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13417

GST_N_3

Glutathione S-transferase, N-terminal domain

63

127

0.95

PF02798

GST_N

Glutathione S-transferase, N-terminal domain

57

122

0.93

PF13409

GST_N_2

Glutathione S-transferase, N-terminal domain

63

123

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ycd-assembly1.cif.gz_A-2 structure of a novel glutathione transferase from agrobacterium tumefaciens. 0.9869 2 211
3lq7-assembly1.cif.gz_A crystal structure of glutathione s-transferase from agrobacterium tumefaciens str. c58 0.9792 1 212
3lq7-assembly2.cif.gz_C-2 crystal structure of glutathione s-transferase from agrobacterium tumefaciens str. c58 0.978 2 208
3lq7-assembly1.cif.gz_B crystal structure of glutathione s-transferase from agrobacterium tumefaciens str. c58 0.975 1 212
3lq7-assembly1.cif.gz_A crystal structure of glutathione s-transferase from agrobacterium tumefaciens str. c58 0.9697 1 212
ID Description Score Start End Superfamily
2ycdA01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9967 2 87 3.40.30.10
2ycdA01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9853 2 87 3.40.30.10
3lq7A01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9802 2 87 3.40.30.10
2ycdA02 Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2; 0.9741 88 203 1.20.1050.10
3lq7C02 Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2; 0.97 88 203 1.20.1050.10
ID Description Score Start End GO Terms
AF-A0A527A1T9-F1-model_v4 Glutathione S-transferase 1.002 1 78 GO:0016740
AF-A0A529NGU8-F1-model_v4 Glutathione S-transferase 0.9967 1 108 GO:0016740
AF-A0A7Y4T7F7-F1-model_v4 Glutathione S-transferase family protein 0.9959 59 212 GO:0016740
AF-A0A086P651-F1-model_v4 Glutathione S-transferase 0.9953 1 109 GO:0016740
AF-A0A5C5CUV7-F1-model_v4 Glutathione S-transferase (EC 2.5.1.18) 0.9944 2 214 GO:0016740

Feature Viewer

pLDDT pTM Quality
93.56 0.91 High
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Predicted Structure (AlphaFold2)

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