F239531
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 162 | 126 | 324 | 368 |
Family's Representative Sequence
| Representative Sequence | 3300028381|Ga0268264_10000107|Ga0268264_10000107107 |
| Length | 363 |
| Sequence | MVRGASLPIVLRQITKTYGGVCALDHVDLDIASGEFLTLLGPSGSGKTTLLMVLAGFTRPDFGSLKFGDTEVIRLAPHLRDVGMVFQNYALFPHMDVAANIGFPLRLRGVGKIEARRRIEAALELVQLGGYGARRVDQLSGGQRQRVALARAVVFEPRILLMDEPLSALDKQLRERMQIELRRLHETLGMTTVYVTHDQREALTVSDRVAVVKAGRIIQLDTPRRLYERPANRFIAEFVGESTILPVQWSNGACICAGQALKLPDGPVPEGRCALLLRPERLRLVDATTPAATFNILRGTVTSLIYQGESILLQARLAQGQDVALRAIAGGAGTQRLPQPGEAIAVGVAPEDTVLIADADGGE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 2 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 3 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 15 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 16 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 17 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 18 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 19 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 20 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 21 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 22 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 23 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 26 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 27 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 31 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 32 | 3300020080 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 33 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 46 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 47 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 48 | 3300030733 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 | Metagenome | Rhizosphere |
| 49 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 50 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 51 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 52 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 53 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 54 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 55 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 56 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 57 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 58 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 59 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 60 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 61 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 62 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 63 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 64 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 65 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 66 | 3300035084 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 | Metagenome | Rhizosphere |
| 67 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 68 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 69 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 70 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 71 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 72 | 3300041509 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG | Metagenome | Unclassified |
| 73 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 74 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 75 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 76 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 77 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 78 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 80 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 81 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 82 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 83 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 84 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 85 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 86 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 87 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 88 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 89 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 90 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 91 | 2643221632 | Leifsonia sp. Root112D2 | Isolate | Unclassified |
| 92 | 2738541272 | Promicromonospora sp. AC04 | Isolate | Unclassified |
| 93 | 2738543027 | Promicromonospora sp. CF082 | Isolate | Unclassified |
| 94 | 2739367654 | Promicromonospora sp. YR516 | Isolate | Unclassified |
| 95 | 2751185782 | Actinoplanes subtropicus NRRL B-24665 | Isolate | Rhizosphere |
| 96 | 2758568522 | Promicromonospora thailandica SAI-039 | Isolate | Unclassified |
| 97 | 2758568621 | Promicromonospora sukumoe SAI-064 | Isolate | Unclassified |
| 98 | 2772190715 | Micromonospora chokoriensis NRRL B-24750 | Isolate | Unclassified |
| 99 | 2791354901 | Actinophytocola xanthii 11-183 | Isolate | Rhizosphere |
| 100 | 2808606365 | Phycicoccus sp. SLBN-51 | Isolate | Unclassified |
| 101 | 2808606394 | Promicromonospora sp. C35 | Isolate | Unclassified |
| 102 | 2816332119 | Kribbella amoyensis DSM 24683 | Isolate | Rhizosphere |
| 103 | 2816332139 | Pseudonocardia kunmingensis DSM 45301 | Isolate | Unclassified |
| 104 | 2855670206 | Micromonospora noduli Lupac 07 | Isolate | Nodule |
| 105 | 2855676851 | Micromonospora saelicesensis GAR05 | Isolate | Unclassified |
| 106 | 2857288857 | Micromonospora noduli ONO23 | Isolate | Unclassified |
| 107 | 2858848962 | Micromonospora saelicesensis GAR06 | Isolate | Unclassified |
| 108 | 2858882152 | Micromonospora noduli MED15 | Isolate | Nodule |
| 109 | 2858888857 | Micromonospora saelicesensis Lupac 06 | Isolate | Unclassified |
| 110 | 2858895516 | Micromonospora saelicesensis PSN13 | Isolate | Unclassified |
| 111 | 2867312974 | Micromonospora musae NGC1-4 | Isolate | Unclassified |
| 112 | 2867319477 | Micromonospora musae MS1-9 | Isolate | Unclassified |
| 113 | 2869048445 | Micromonospora saelicesensis PSN01 | Isolate | Unclassified |
| 114 | 2869061728 | Micromonospora noduli ONO86 | Isolate | Unclassified |
| 115 | 2869068681 | Micromonospora noduli GUI43 | Isolate | Unclassified |
| 116 | 2880489317 | Micromonospora ureilytica DSM 101692 | Isolate | Unclassified |
| 117 | 2880495981 | Micromonospora vinacea DSM 101695 | Isolate | Unclassified |
| 118 | 2929219909 | Micromonospora sp. R-75348 Hybrid assembly | Isolate | Unclassified |
| 119 | 2929226422 | Micromonospora sp. R-74116 Hybrid assembly | Isolate | Unclassified |
| 120 | 2996221748 | Micromonospora veneta CAP181 | Isolate | Unclassified |
| 121 | 8003830390 | Micromonospora parastrephiae STR1_7 | Isolate | Rhizosphere |
| 122 | 8003870546 | Micromonospora tarensis STR1s_6 | Isolate | Rhizosphere |
| 123 | 8054704163 | Micromonospora trifolii NIE79 | Isolate | Nodule |
| 124 | 8054727385 | Micromonospora alfalfae MED01 | Isolate | Nodule |
| 125 | 8054734606 | Micromonospora hortensis NIE111 | Isolate | Nodule |
| 126 | 8056579771 | Promicromonospora iranensis UTMC 00792 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 75.93 |
| Metatranscriptomes | 1.85 |
| Isolates | 22.22 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.85 |
| Nodule | 3.09 |
| Rhizoplane | 2.47 |
| Rhizosphere | 71.6 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0268264_10000107 | 3300028381 | Bacteria | 209105 |
| 2 | JGI24739J22299_10004984 | 3300001989 | Bacteria | 5055 |
| 3 | Ga0070658_10000034 | 3300005327 | Bacteria | 146880 |
| 4 | Ga0070660_100057802 | 3300005339 | Bacteria | 3006 |
| 5 | Ga0070660_100114001 | 3300005339 | Bacteria | 2153 |
| 6 | Ga0070668_100000086 | 3300005347 | Bacteria | 58053 |
| 7 | Ga0070668_100165845 | 3300005347 | Bacteria | 1795 |
| 8 | Ga0070671_100132704 | 3300005355 | Bacteria | 2098 |
| 9 | Ga0070659_100011787 | 3300005366 | Bacteria | 6470 |
| 10 | Ga0070667_100032901 | 3300005367 | Bacteria | 4328 |
| 11 | Ga0070710_10002090 | 3300005437 | Bacteria | 9466 |
| 12 | Ga0070705_100074119 | 3300005440 | Bacteria | 2068 |
| 13 | Ga0070681_10184609 | 3300005458 | Bacteria | 2006 |
| 14 | Ga0070684_100006472 | 3300005535 | Bacteria | 9068 |
| 15 | Ga0070684_100045555 | 3300005535 | Bacteria | 3798 |
| 16 | Ga0070684_100227205 | 3300005535 | Bacteria | 1704 |
| 17 | Ga0070672_100109481 | 3300005543 | Bacteria | 2250 |
| 18 | Ga0068855_100141781 | 3300005563 | Bacteria | 2738 |
| 19 | Ga0068857_100068069 | 3300005577 | Bacteria | 3170 |
| 20 | Ga0068857_100276064 | 3300005577 | Bacteria | 1545 |
| 21 | Ga0068852_100147472 | 3300005616 | Bacteria | 2184 |
| 22 | Ga0068858_100167981 | 3300005842 | Bacteria | 2068 |
| 23 | Ga0068860_100000808 | 3300005843 | Bacteria | 35021 |
| 24 | Ga0068860_100054405 | 3300005843 | Bacteria | 3805 |
| 25 | Ga0081455_10008667 | 3300005937 | Bacteria | 10535 |
| 26 | Ga0081540_1008665 | 3300005983 | Bacteria | 7085 |
| 27 | Ga0081539_10000121 | 3300005985 | Bacteria | 183432 |
| 28 | Ga0105240_10010629 | 3300009093 | Bacteria | 12929 |
| 29 | Ga0105242_10033734 | 3300009176 | Bacteria | 4100 |
| 30 | Ga0105249_10040718 | 3300009553 | Bacteria | 4221 |
| 31 | Ga0157373_10025128 | 3300013100 | Bacteria | 4312 |
| 32 | Ga0157370_10033291 | 3300013104 | Bacteria | 5024 |
| 33 | Ga0157370_10084006 | 3300013104 | Bacteria | 2993 |
| 34 | Ga0157369_10001004 | 3300013105 | Bacteria | 35635 |
| 35 | Ga0157369_10019326 | 3300013105 | Bacteria | 7622 |
| 36 | Ga0157369_10332756 | 3300013105 | Bacteria | 1578 |
| 37 | Ga0163162_10069861 | 3300013306 | Bacteria | 3564 |
| 38 | Ga0157375_10011671 | 3300013308 | Bacteria | 7763 |
| 39 | Ga0197907_11251495 | 3300020069 | Bacteria | 3622 |
| 40 | Ga0206356_11903605 | 3300020070 | Bacteria | 2091 |
| 41 | Ga0206350_11248423 | 3300020080 | Bacteria | 2648 |
| 42 | Ga0207692_10003543 | 3300025898 | Bacteria | 6108 |
| 43 | Ga0207647_10006092 | 3300025904 | Bacteria | 8788 |
| 44 | Ga0207705_10000001 | 3300025909 | Bacteria | 2061880 |
| 45 | Ga0207695_10085913 | 3300025913 | Bacteria | 3174 |
| 46 | Ga0207657_10115445 | 3300025919 | Bacteria | 2213 |
| 47 | Ga0207690_10056585 | 3300025932 | Bacteria | 2646 |
| 48 | Ga0207661_10033927 | 3300025944 | Bacteria | 3964 |
| 49 | Ga0207667_10064313 | 3300025949 | Bacteria | 3830 |
| 50 | Ga0207667_10132945 | 3300025949 | Bacteria | 2562 |
| 51 | Ga0207668_10000814 | 3300025972 | Bacteria | 19131 |
| 52 | Ga0207703_10048221 | 3300026035 | Bacteria | 3437 |
| 53 | Ga0207678_10018906 | 3300026067 | Bacteria | 6054 |
| 54 | Ga0207674_10155743 | 3300026116 | Bacteria | 2240 |
| 55 | Ga0268264_10014489 | 3300028381 | Bacteria | 6480 |
| 56 | Ga0265334_10005063 | 3300028573 | Bacteria | 5781 |
| 57 | Ga0307515_10000032 | 3300028794 | Bacteria | 358317 |
| 58 | Ga0307515_10082394 | 3300028794 | Bacteria | 4162 |
| 59 | Ga0307512_10011149 | 3300030522 | Bacteria | 8531 |
| 60 | Ga0314311_1252538 | 3300030733 | Bacteria | 4230 |
| 61 | Ga0265340_10016100 | 3300031247 | Bacteria | 3877 |
| 62 | Ga0307509_10048279 | 3300031507 | Bacteria | 4573 |
| 63 | Ga0307408_100010318 | 3300031548 | Bacteria | 6161 |
| 64 | Ga0316579_10000835 | 3300031691 | Bacteria | 10638 |
| 65 | Ga0307516_10002640 | 3300031730 | Bacteria | 23723 |
| 66 | Ga0307516_10089257 | 3300031730 | Bacteria | 2913 |
| 67 | Ga0307405_10046468 | 3300031731 | Bacteria | 2667 |
| 68 | Ga0307405_10085305 | 3300031731 | Bacteria | 2076 |
| 69 | Ga0307405_10116789 | 3300031731 | Bacteria | 1818 |
| 70 | Ga0307413_10001932 | 3300031824 | Bacteria | 8222 |
| 71 | Ga0307410_10001617 | 3300031852 | Bacteria | 10344 |
| 72 | Ga0307406_10011901 | 3300031901 | Bacteria | 4945 |
| 73 | Ga0307406_10019113 | 3300031901 | Bacteria | 4018 |
| 74 | Ga0307406_10023847 | 3300031901 | Bacteria | 3646 |
| 75 | Ga0307407_10002569 | 3300031903 | Bacteria | 7148 |
| 76 | Ga0307407_10007655 | 3300031903 | Bacteria | 4903 |
| 77 | Ga0307407_10027511 | 3300031903 | Bacteria | 3027 |
| 78 | Ga0307412_10010485 | 3300031911 | Bacteria | 5340 |
| 79 | Ga0307409_100003404 | 3300031995 | Bacteria | 8637 |
| 80 | Ga0307409_100013289 | 3300031995 | Bacteria | 5290 |
| 81 | Ga0307416_100000895 | 3300032002 | Bacteria | 15737 |
| 82 | Ga0307416_100008073 | 3300032002 | Bacteria | 6749 |
| 83 | Ga0307416_100016033 | 3300032002 | Bacteria | 5194 |
| 84 | Ga0307416_100019608 | 3300032002 | Bacteria | 4802 |
| 85 | Ga0307414_10002694 | 3300032004 | Bacteria | 9341 |
| 86 | Ga0307414_10012976 | 3300032004 | Bacteria | 4946 |
| 87 | Ga0307411_10000727 | 3300032005 | Bacteria | 12128 |
| 88 | Ga0307411_10013983 | 3300032005 | Bacteria | 4452 |
| 89 | Ga0307411_10015225 | 3300032005 | Bacteria | 4313 |
| 90 | Ga0307415_100000863 | 3300032126 | Bacteria | 13862 |
| 91 | Ga0307415_100004457 | 3300032126 | Bacteria | 7266 |
| 92 | Ga0307415_100022054 | 3300032126 | Bacteria | 3925 |
| 93 | Ga0307415_100178932 | 3300032126 | Bacteria | 1662 |
| 94 | Ga0307507_10104230 | 3300033179 | Bacteria | 2355 |
| 95 | Ga0373928_0028333 | 3300035084 | Bacteria | 1225 |
| 96 | Ga0373951_0000015 | 3300035091 | Bacteria | 69872 |
| 97 | Ga0373942_0000333 | 3300035207 | Bacteria | 12801 |
| 98 | Ga0395900_0184394 | 3300037418 | Bacteria | 2119 |
| 99 | Ga0395898_0225694 | 3300037466 | Bacteria | 1786 |
| 100 | Ga0395901_0014769 | 3300038443 | Bacteria | 7936 |
| 101 | Ga0451843_0744056 | 3300041509 | Bacteria | 1867 |
| 102 | Ga0451853_0342568 | 3300041512 | Bacteria | 8641 |
| 103 | Ga0466972_0000651 | 3300044658 | Bacteria | 16742 |
| 104 | Ga0466965_0000134 | 3300044683 | Bacteria | 21100 |
| 105 | Ga0466965_0009522 | 3300044683 | Bacteria | 4514 |
| 106 | Ga0466960_0092147 | 3300044901 | Bacteria | 1546 |
| 107 | Ga0466967_0377514 | 3300045976 | Bacteria | 1376 |
| 108 | Ga0495594_0036507 | 3300046499 | Bacteria | 2680 |
| 109 | Ga0496102_0011052 | 3300048905 | Bacteria | 7776 |
| 110 | Ga0496108_0000157 | 3300048911 | Bacteria | 64803 |
| 111 | Ga0496112_0310843 | 3300048915 | Bacteria | 1521 |
| 112 | Ga0496112_0338983 | 3300048915 | Bacteria | 1447 |
| 113 | Ga0501032_0018490 | 3300049569 | Bacteria | 4881 |
| 114 | Ga0501032_0079742 | 3300049569 | Bacteria | 2179 |
| 115 | Ga0501033_0031024 | 3300049570 | Bacteria | 4018 |
| 116 | Ga0501033_0031722 | 3300049570 | Bacteria | 3968 |
| 117 | Ga0501034_0028910 | 3300049571 | Bacteria | 5637 |
| 118 | Ga0501034_0040285 | 3300049571 | Bacteria | 4728 |
| 119 | Ga0501034_0226241 | 3300049571 | Bacteria | 1821 |
| 120 | Ga0501037_0025519 | 3300049573 | Bacteria | 4366 |
| 121 | Ga0501038_0044665 | 3300049574 | Bacteria | 3848 |
| 122 | Ga0501047_0054114 | 3300049581 | Bacteria | 3882 |
| 123 | Ga0501070_0002854 | 3300049586 | Bacteria | 15068 |
| 124 | Ga0500568_0025989 | 3300053139 | Bacteria | 2462 |
| 125 | Ga0500616_0000175 | 3300053153 | Bacteria | 106718 |
| 126 | Ga0500616_0007533 | 3300053153 | Bacteria | 6891 |
| 127 | 2644182357 | 2643221632 | Bacteria | 3406696 |
| 128 | 2738697122 | 2738541272 | Bacteria | 6848551 |
| 129 | 2739324292 | 2738543027 | Bacteria | 6409078 |
| 130 | 2739607126 | 2739367654 | Bacteria | 6049412 |
| 131 | 2753265638 | 2751185782 | Bacteria | 11227053 |
| 132 | 2760304964 | 2758568522 | Bacteria | 5953541 |
| 133 | 2760621199 | 2758568621 | Bacteria | 5967089 |
| 134 | 2772642990 | 2772190715 | Bacteria | 6959372 |
| 135 | 2791915354 | 2791354901 | Bacteria | 8322202 |
| 136 | 2808875399 | 2808606365 | Bacteria | 4301966 |
| 137 | 2809025999 | 2808606394 | Bacteria | 6248540 |
| 138 | 2816425613 | 2816332119 | Bacteria | 8120218 |
| 139 | 2816508260 | 2816332139 | Bacteria | 9138787 |
| 140 | 2855673034 | 2855670206 | Bacteria | 7120389 |
| 141 | 2855679195 | 2855676851 | Bacteria | 7063653 |
| 142 | 2857293772 | 2857288857 | Bacteria | 7189066 |
| 143 | 2858851054 | 2858848962 | Bacteria | 6963058 |
| 144 | 2858884418 | 2858882152 | Bacteria | 7230291 |
| 145 | 2858893668 | 2858888857 | Bacteria | 7060307 |
| 146 | 2858896805 | 2858895516 | Bacteria | 7378898 |
| 147 | 2867317659 | 2867312974 | Bacteria | 7058875 |
| 148 | 2867322374 | 2867319477 | Bacteria | 7069771 |
| 149 | 2869053605 | 2869048445 | Bacteria | 6875584 |
| 150 | 2869062991 | 2869061728 | Bacteria | 7112407 |
| 151 | 2869069158 | 2869068681 | Bacteria | 7205615 |
| 152 | 2880491851 | 2880489317 | Bacteria | 7096270 |
| 153 | 2880500453 | 2880495981 | Bacteria | 7340502 |
| 154 | 2929224122 | 2929219909 | Bacteria | 6984360 |
| 155 | 2929228958 | 2929226422 | Bacteria | 7248583 |
| 156 | 2996224562 | 2996221748 | Bacteria | 6799777 |
| 157 | 8003831353 | 8003830390 | Bacteria | 6541657 |
| 158 | 8003873780 | 8003870546 | Bacteria | 7396674 |
| 159 | 8054706348 | 8054704163 | Bacteria | 7247792 |
| 160 | 8054727922 | 8054727385 | Bacteria | 7558670 |
| 161 | 8054736840 | 8054734606 | Bacteria | 6947278 |
| 162 | 8056579902 | 8056579771 | Bacteria | 5840325 |
| 163 | Ga0268264_10000107 | |||
| 164 | JGI24739J22299_10004984 | |||
| 165 | Ga0070658_10000034 | |||
| 166 | Ga0070660_100057802 | |||
| 167 | Ga0070660_100114001 | |||
| 168 | Ga0070668_100000086 | |||
| 169 | Ga0070668_100165845 | |||
| 170 | Ga0070671_100132704 | |||
| 171 | Ga0070659_100011787 | |||
| 172 | Ga0070667_100032901 | |||
| 173 | Ga0070710_10002090 | |||
| 174 | Ga0070705_100074119 | |||
| 175 | Ga0070681_10184609 | |||
| 176 | Ga0070684_100006472 | |||
| 177 | Ga0070684_100045555 | |||
| 178 | Ga0070684_100227205 | |||
| 179 | Ga0070672_100109481 | |||
| 180 | Ga0068855_100141781 | |||
| 181 | Ga0068857_100068069 | |||
| 182 | Ga0068857_100276064 | |||
| 183 | Ga0068852_100147472 | |||
| 184 | Ga0068858_100167981 | |||
| 185 | Ga0068860_100000808 | |||
| 186 | Ga0068860_100054405 | |||
| 187 | Ga0081455_10008667 | |||
| 188 | Ga0081540_1008665 | |||
| 189 | Ga0081539_10000121 | |||
| 190 | Ga0105240_10010629 | |||
| 191 | Ga0105242_10033734 | |||
| 192 | Ga0105249_10040718 | |||
| 193 | Ga0157373_10025128 | |||
| 194 | Ga0157370_10033291 | |||
| 195 | Ga0157370_10084006 | |||
| 196 | Ga0157369_10001004 | |||
| 197 | Ga0157369_10019326 | |||
| 198 | Ga0157369_10332756 | |||
| 199 | Ga0163162_10069861 | |||
| 200 | Ga0157375_10011671 | |||
| 201 | Ga0197907_11251495 | |||
| 202 | Ga0206356_11903605 | |||
| 203 | Ga0206350_11248423 | |||
| 204 | Ga0207692_10003543 | |||
| 205 | Ga0207647_10006092 | |||
| 206 | Ga0207705_10000001 | |||
| 207 | Ga0207695_10085913 | |||
| 208 | Ga0207657_10115445 | |||
| 209 | Ga0207690_10056585 | |||
| 210 | Ga0207661_10033927 | |||
| 211 | Ga0207667_10064313 | |||
| 212 | Ga0207667_10132945 | |||
| 213 | Ga0207668_10000814 | |||
| 214 | Ga0207703_10048221 | |||
| 215 | Ga0207678_10018906 | |||
| 216 | Ga0207674_10155743 | |||
| 217 | Ga0268264_10014489 | |||
| 218 | Ga0265334_10005063 | |||
| 219 | Ga0307515_10000032 | |||
| 220 | Ga0307515_10082394 | |||
| 221 | Ga0307512_10011149 | |||
| 222 | Ga0314311_1252538 | |||
| 223 | Ga0265340_10016100 | |||
| 224 | Ga0307509_10048279 | |||
| 225 | Ga0307408_100010318 | |||
| 226 | Ga0316579_10000835 | |||
| 227 | Ga0307516_10002640 | |||
| 228 | Ga0307516_10089257 | |||
| 229 | Ga0307405_10046468 | |||
| 230 | Ga0307405_10085305 | |||
| 231 | Ga0307405_10116789 | |||
| 232 | Ga0307413_10001932 | |||
| 233 | Ga0307410_10001617 | |||
| 234 | Ga0307406_10011901 | |||
| 235 | Ga0307406_10019113 | |||
| 236 | Ga0307406_10023847 | |||
| 237 | Ga0307407_10002569 | |||
| 238 | Ga0307407_10007655 | |||
| 239 | Ga0307407_10027511 | |||
| 240 | Ga0307412_10010485 | |||
| 241 | Ga0307409_100003404 | |||
| 242 | Ga0307409_100013289 | |||
| 243 | Ga0307416_100000895 | |||
| 244 | Ga0307416_100008073 | |||
| 245 | Ga0307416_100016033 | |||
| 246 | Ga0307416_100019608 | |||
| 247 | Ga0307414_10002694 | |||
| 248 | Ga0307414_10012976 | |||
| 249 | Ga0307411_10000727 | |||
| 250 | Ga0307411_10013983 | |||
| 251 | Ga0307411_10015225 | |||
| 252 | Ga0307415_100000863 | |||
| 253 | Ga0307415_100004457 | |||
| 254 | Ga0307415_100022054 | |||
| 255 | Ga0307415_100178932 | |||
| 256 | Ga0307507_10104230 | |||
| 257 | Ga0373928_0028333 | |||
| 258 | Ga0373951_0000015 | |||
| 259 | Ga0373942_0000333 | |||
| 260 | Ga0395900_0184394 | |||
| 261 | Ga0395898_0225694 | |||
| 262 | Ga0395901_0014769 | |||
| 263 | Ga0451843_0744056 | |||
| 264 | Ga0451853_0342568 | |||
| 265 | Ga0466972_0000651 | |||
| 266 | Ga0466965_0000134 | |||
| 267 | Ga0466965_0009522 | |||
| 268 | Ga0466960_0092147 | |||
| 269 | Ga0466967_0377514 | |||
| 270 | Ga0495594_0036507 | |||
| 271 | Ga0496102_0011052 | |||
| 272 | Ga0496108_0000157 | |||
| 273 | Ga0496112_0310843 | |||
| 274 | Ga0496112_0338983 | |||
| 275 | Ga0501032_0018490 | |||
| 276 | Ga0501032_0079742 | |||
| 277 | Ga0501033_0031024 | |||
| 278 | Ga0501033_0031722 | |||
| 279 | Ga0501034_0028910 | |||
| 280 | Ga0501034_0040285 | |||
| 281 | Ga0501034_0226241 | |||
| 282 | Ga0501037_0025519 | |||
| 283 | Ga0501038_0044665 | |||
| 284 | Ga0501047_0054114 | |||
| 285 | Ga0501070_0002854 | |||
| 286 | Ga0500568_0025989 | |||
| 287 | Ga0500616_0000175 | |||
| 288 | Ga0500616_0007533 | |||
| 289 | 2644182357 | |||
| 290 | 2738697122 | |||
| 291 | 2739324292 | |||
| 292 | 2739607126 | |||
| 293 | 2753265638 | |||
| 294 | 2760304964 | |||
| 295 | 2760621199 | |||
| 296 | 2772642990 | |||
| 297 | 2791915354 | |||
| 298 | 2808875399 | |||
| 299 | 2809025999 | |||
| 300 | 2816425613 | |||
| 301 | 2816508260 | |||
| 302 | 2855673034 | |||
| 303 | 2855679195 | |||
| 304 | 2857293772 | |||
| 305 | 2858851054 | |||
| 306 | 2858884418 | |||
| 307 | 2858893668 | |||
| 308 | 2858896805 | |||
| 309 | 2867317659 | |||
| 310 | 2867322374 | |||
| 311 | 2869053605 | |||
| 312 | 2869062991 | |||
| 313 | 2869069158 | |||
| 314 | 2880491851 | |||
| 315 | 2880500453 | |||
| 316 | 2929224122 | |||
| 317 | 2929228958 | |||
| 318 | 2996224562 | |||
| 319 | 8003831353 | |||
| 320 | 8003873780 | |||
| 321 | 8054706348 | |||
| 322 | 8054727922 | |||
| 323 | 8054736840 | |||
| 324 | 8056579902 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2pcj-assembly1.cif.gz_B | crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 | 0.9476 | 11 | 224 |
| 7z17-assembly1.cif.gz_J | e. coli c-p lyase bound to a phnk abc dimer in an open conformation | 0.9448 | 11 | 241 |
| 7z19-assembly1.cif.gz_I | e. coli c-p lyase bound to a single phnk abc domain | 0.9442 | 11 | 241 |
| 4jbw-assembly1.cif.gz_A | crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc | 0.9438 | 10 | 352 |
| 4yms-assembly1.cif.gz_A | crystal structure of an amino acid abc transporter | 0.9432 | 11 | 241 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2awoD01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9737 | 10 | 223 | 3.40.50.300 |
| af_P33360_1_239_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9733 | 11 | 242 | 3.40.50.300 |
| af_Q58762_1_229_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9713 | 11 | 242 | 3.40.50.300 |
| af_P77795_1_218_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9711 | 7 | 224 | 3.40.50.300 |
| af_Q2G089_1_236_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9691 | 11 | 241 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-Q3BNZ3-F1-model_v4 | Methionine import ATP-binding protein MetN (EC 7.4.2.11) | 0.9648 | 11 | 241 |
GO:0005524
GO:0005886 GO:0016887 GO:0033232 |
| AF-A0A0K8Q7F3-F1-model_v4 | sn-glycerol-3-phosphate import ATP-binding protein UgpC 1 | 0.9644 | 10 | 123 |
GO:0005524
GO:0016887 GO:0055052 |
| AF-A0A382FBJ4-F1-model_v4 | ABC transporter domain-containing protein | 0.9585 | 82 | 222 |
GO:0005524
GO:0005886 GO:0016887 GO:0022857 |
| AF-A0A2V7DFQ9-F1-model_v4 | LPS export ABC transporter ATP-binding protein | 0.9503 | 11 | 211 |
GO:0005524
GO:0016887 GO:0043190 GO:0055085 |
| AF-U3BNP7-F1-model_v4 | Putative ABC transporter ATP-binding protein | 0.9503 | 84 | 225 |
GO:0005524
GO:0005886 GO:0016887 GO:0022857 GO:0044874 GO:0089705 |