F238079

General Info

Members Datasets Scaffolds Average Seq Length
161 124 115 522

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221678|2644442139
Length 578
Sequence SGAILLASTVLGDSGTARADAAASSPYPPSASASASASASVSEFGSASGTVSASGAVSEPASGTVSASASASVEVPAEFGSDWHDPLTAAPPVTRPHAKSCQVTVAEAQFRDFTPYRGSYTPPDGCGDRWSKVVLRLDGKVKGRQFDRLGYLHLGGVEIFRTSTPEPSPDGIEWSVEKDVTRYADTFRSARDVEMLIGNVVDDTYTGVIDVKVTLTFYQGKPPAAVPDRVLTPADGPGGTTLTTPRNSERVVAEVYATGSGGGCEEYWYLTVPATAPYSCRSDDGPYREVQVEVDGQLAGIAAPFPTVWTGGWSNPFLWYVVPGPRAFDIKPIEYDLTPFAGILDDGRPHRVEVSVVGVSEGQSGWSTPVNVLVWQDPGKSVVGGGLLTHEAGALTDSATYTPGTEHRVDTEGGHRLTVAGYLDTSHGRVRTTVTRALANTSAHRWTDGESVDGLDATWTDEESVTVDGRGSSRTTRTHRTYTMNGTTTLGADDRLRTVLTLGDRAGSLTVRNGRRTSWARLDDTYTGDATFTVNVPRDQRHAVGTTSERYRLYGSAGCHDRRLTTVQGVLTEDHGGC

Samples

Sample ID Description Type Environment
1 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
2 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
3 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
4 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
5 2643221647 Streptomyces sp. Root369 Isolate Unclassified
6 2643221670 Streptomyces sp. Root431 Isolate Unclassified
7 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
8 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
9 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
10 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
11 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
12 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
13 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
14 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
15 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
16 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
17 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
18 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
19 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
20 2867428634 Streptomyces sp. RP5T Isolate Unclassified
21 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
22 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
23 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
24 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
25 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
26 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
27 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
28 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
29 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
30 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
31 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
32 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
33 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
34 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
35 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
36 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
37 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
38 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
39 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
40 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
41 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
42 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
43 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
44 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
48 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
52 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
55 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
56 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
57 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
58 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
59 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
60 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
61 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
62 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
63 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
64 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
65 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
66 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
67 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
70 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
71 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
72 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
73 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
74 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
75 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
76 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
77 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
78 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
79 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
80 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
81 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
82 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
83 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
84 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
85 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
86 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
87 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
88 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
89 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
90 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
91 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
92 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
93 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
94 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
95 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
96 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
97 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
98 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
99 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
100 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
101 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
102 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
103 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
104 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
105 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
106 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
107 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
108 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
109 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
110 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
111 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
112 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
113 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
116 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
117 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
118 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
119 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
120 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
121 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
122 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
123 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
124 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.81
Metatranscriptomes 0
Isolates 29.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.48
Nodule 1.86
Rhizoplane 0.62
Rhizosphere 62.73
Stem 0
Stem Tuber 0
Unclassified 32.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10005381 3300003316 Bacteria 9494
2 rootH1_10005381 3300003323 Bacteria 7508
3 rootH1_10098078 3300003316 Bacteria 2424
4 rootH2_10022413 3300003320 Bacteria 13403
5 rootL2_10003630 3300003322 Bacteria 7311
6 Ga0070665_100190151 3300005548 Bacteria 2054
7 Ga0068856_100203569 3300005614 Bacteria 1994
8 Ga0068862_100202679 3300005844 Bacteria 1790
9 Ga0075363_100030625 3300006048 Bacteria 2786
10 Ga0099826_10077389 3300006948 Bacteria 2087
11 Ga0114129_10217519 3300009147 Bacteria 2579
12 Ga0163163_10265657 3300014325 Bacteria 1767
13 Ga0183367_1003 3300015688 Bacteria 814276
14 Ga0207647_10014806 3300025904 Bacteria 5364
15 Ga0207658_10114934 3300025986 Bacteria 2135
16 Ga0307517_10001103 3300028786 Bacteria 45619
17 Ga0307515_10000524 3300028794 Bacteria 91311
18 Ga0307515_10002981 3300028794 Bacteria 35943
19 Ga0307515_10060377 3300028794 Bacteria 5408
20 Ga0307515_10062398 3300028794 Bacteria 5262
21 Ga0307511_10000334 3300030521 Bacteria 50044
22 Ga0307512_10003152 3300030522 Bacteria 19595
23 Ga0307512_10006215 3300030522 Bacteria 12171
24 Ga0307512_10008907 3300030522 Bacteria 9733
25 Ga0307512_10042687 3300030522 Bacteria 3751
26 Ga0307512_10053973 3300030522 Bacteria 3188
27 Ga0307513_10042523 3300031456 Bacteria 5002
28 Ga0307509_10099118 3300031507 Bacteria 2956
29 Ga0307509_10136936 3300031507 Bacteria 2392
30 Ga0307508_10001661 3300031616 Bacteria 24733
31 Ga0307508_10012146 3300031616 Bacteria 7875
32 Ga0307508_10030898 3300031616 Bacteria 4841
33 Ga0307508_10064612 3300031616 Bacteria 3226
34 Ga0307508_10088288 3300031616 Bacteria 2684
35 Ga0307514_10001124 3300031649 Bacteria 37073
36 Ga0307514_10035199 3300031649 Bacteria 3987
37 Ga0307516_10002535 3300031730 Bacteria 24316
38 Ga0307516_10026261 3300031730 Bacteria 5916
39 Ga0307516_10075552 3300031730 Bacteria 3223
40 Ga0307518_10071900 3300031838 Bacteria 2505
41 Ga0307507_10000003 3300033179 Bacteria 371707
42 Ga0307507_10024791 3300033179 Bacteria 6526
43 Ga0307507_10037996 3300033179 Bacteria 4889
44 Ga0307510_10024475 3300033180 Bacteria 6974
45 Ga0307510_10026301 3300033180 Bacteria 6692
46 Ga0307510_10050929 3300033180 Bacteria 4386
47 Ga0373951_0000082 3300035091 Bacteria 37430
48 Ga0373942_0000149 3300035207 Bacteria 16701
49 Ga0395898_0020297 3300037466 Bacteria 6749
50 Ga0395901_0027345 3300038443 Bacteria 5860
51 Ga0439439_0005846 3300041406 Bacteria 2828
52 Ga0451853_0890138 3300041512 Bacteria 3976
53 Ga0451853_1754207 3300041512 Bacteria 11758
54 Ga0439457_001090 3300042014 Bacteria 8189
55 Ga0439457_001147 3300042014 Bacteria 7991
56 Ga0439457_006322 3300042014 Bacteria 2910
57 Ga0450894_001808 3300042131 Bacteria 2974
58 Ga0450896_000322 3300042133 Bacteria 4572
59 Ga0450898_000732 3300042134 Bacteria 4002
60 Ga0450903_000094 3300042138 Bacteria 18613
61 Ga0450906_001192 3300042145 Bacteria 5752
62 Ga0439458_0000798 3300042157 Bacteria 8086
63 Ga0466971_0035680 3300044719 Bacteria 2230
64 Ga0466960_0036383 3300044901 Bacteria 2305
65 Ga0466959_0101462 3300045049 Bacteria 2060
66 Ga0495603_0008175 3300046455 Bacteria 6323
67 Ga0495603_0009754 3300046455 Bacteria 5810
68 Ga0495603_0019807 3300046455 Bacteria 4073
69 Ga0495629_0019997 3300046459 Bacteria 4778
70 Ga0495629_0041091 3300046459 Bacteria 3254
71 Ga0495638_0045821 3300046460 Bacteria 2750
72 Ga0495651_0001693 3300046462 Bacteria 17046
73 Ga0495582_0019899 3300046473 Bacteria 3671
74 Ga0495662_0000551 3300046476 Bacteria 17180
75 Ga0495664_0004678 3300046477 Bacteria 7486
76 Ga0495594_0004684 3300046499 Bacteria 7051
77 Ga0495594_0016765 3300046499 Bacteria 3863
78 Ga0495606_0009196 3300046507 Bacteria 8399
79 Ga0495616_0046897 3300046513 Bacteria 2179
80 Ga0495618_0008513 3300046514 Bacteria 6202
81 Ga0495666_0032731 3300046526 Bacteria 2543
82 Ga0495640_0008739 3300046533 Bacteria 7936
83 Ga0495587_0001028 3300046536 Bacteria 18349
84 Ga0495625_0002537 3300046660 Bacteria 19641
85 Ga0495635_0065467 3300046663 Bacteria 2493
86 Ga0495635_0157377 3300046663 Bacteria 1546
87 Ga0495588_0015567 3300046674 Bacteria 3663
88 Ga0495657_0015712 3300046675 Bacteria 5532
89 Ga0495613_0001398 3300046689 Bacteria 18380
90 Ga0495613_0021968 3300046689 Bacteria 4757
91 Ga0495589_0003578 3300046794 Bacteria 8402
92 Ga0495589_0060335 3300046794 Bacteria 1863
93 Ga0495589_0071196 3300046794 Bacteria 1699
94 Ga0495604_0000673 3300047317 Bacteria 28933
95 Ga0495636_0009857 3300047318 Bacteria 3763
96 Ga0495674_0127088 3300047319 Bacteria 2150
97 Ga0495676_0002663 3300047321 Bacteria 15987
98 Ga0495676_0002857 3300047321 Bacteria 15570
99 Ga0495676_0027992 3300047321 Bacteria 4823
100 Ga0495687_001226 3300047443 Bacteria 24519
101 Ga0495687_001692 3300047443 Bacteria 19676
102 Ga0495687_021820 3300047443 Bacteria 3087
103 Ga0495675_0007725 3300047444 Bacteria 6633
104 Ga0495685_003463 3300047447 Bacteria 5039
105 Ga0495685_014235 3300047447 Bacteria 2703
106 Ga0495681_0002334 3300047470 Bacteria 13628
107 Ga0495593_0003505 3300047673 Bacteria 9384
108 Ga0495593_0040985 3300047673 Bacteria 2491
109 Ga0495614_0002396 3300048089 Bacteria 8333
110 Ga0496108_0000007 3300048911 Bacteria 351492
111 Ga0495678_016726 3300049459 Bacteria 3343
112 Ga0501033_0025822 3300049570 Bacteria 4423
113 Ga0500641_0031985 3300053096 Bacteria 2078
114 Ga0500560_001012 3300053107 Bacteria 4522
115 Ga0500573_0013245 3300053140 Bacteria 4644

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053096 Ga0500641_0031985 Ga0500641_0031985_38_1360 387
2 3300048911 Ga0496108_0000007 Ga0496108_0000007_195156_196724 424
3 3300025986 Ga0207658_10114934 Ga0207658_101149342 439
4 3300046663 Ga0495635_0157377 Ga0495635_0157377_22_1437 445
5 3300028794 Ga0307515_10060377 Ga0307515_100603775 448
6 3300030522 Ga0307512_10006215 Ga0307512_1000621510 449
7 3300046513 Ga0495616_0046897 Ga0495616_0046897_738_2165 449
8 3300031616 Ga0307508_10064612 Ga0307508_100646122 460
9 3300003316 rootH1_10098078 rootH1_100980782 461
10 3300031730 Ga0307516_10075552 Ga0307516_100755521 461
11 3300035207 Ga0373942_0000149 Ga0373942_0000149_14014_15603 464
12 iso_pu_bacteria 2946064051 2946065229 465
13 3300009147 Ga0114129_10217519 Ga0114129_102175192 466
14 3300028794 Ga0307515_10002981 Ga0307515_1000298121 466
15 3300030522 Ga0307512_10003152 Ga0307512_1000315221 466
16 3300031616 Ga0307508_10030898 Ga0307508_100308983 466
17 3300046460 Ga0495638_0045821 Ga0495638_0045821_788_2362 466
18 3300041406 Ga0439439_0005846 Ga0439439_0005846_824_2500 467
19 3300042014 Ga0439457_001090 Ga0439457_001090_1495_3171 467
20 3300014325 Ga0163163_10265657 Ga0163163_102656571 469
21 3300005844 Ga0068862_100202679 Ga0068862_1002026791 470
22 3300047318 Ga0495636_0009857 Ga0495636_0009857_1348_2997 476
23 3300033179 Ga0307507_10000003 Ga0307507_1000000323 477
24 3300042014 Ga0439457_001147 Ga0439457_001147_4603_6207 477
25 3300046794 Ga0495589_0060335 Ga0495589_0060335_216_1847 477
26 3300047447 Ga0495685_014235 Ga0495685_014235_1061_2692 477
27 iso_pu_bacteria 3006486233 3006491153 477
28 3300005548 Ga0070665_100190151 Ga0070665_1001901512 478
29 3300033179 Ga0307507_10024791 Ga0307507_100247912 478
30 3300006948 Ga0099826_10077389 Ga0099826_100773892 479
31 3300031616 Ga0307508_10012146 Ga0307508_100121463 479
32 3300031649 Ga0307514_10001124 Ga0307514_100011249 479
33 3300031730 Ga0307516_10002535 Ga0307516_1000253521 479
34 3300035091 Ga0373951_0000082 Ga0373951_0000082_8564_10084 479
35 3300042138 Ga0450903_000094 Ga0450903_000094_8405_10039 479
36 3300042157 Ga0439458_0000798 Ga0439458_0000798_1018_2652 479
37 3300047443 Ga0495687_021820 Ga0495687_021820_809_2431 480
38 3300041512 Ga0451853_0890138 Ga0451853_0890138_1794_3431 481
39 3300047444 Ga0495675_0007725 Ga0495675_0007725_2794_4443 481
40 3300046455 Ga0495603_0008175 Ga0495603_0008175_2924_4573 482
41 3300046455 Ga0495603_0009754 Ga0495603_0009754_2720_4321 482
42 3300046459 Ga0495629_0019997 Ga0495629_0019997_1700_3301 482
43 3300046459 Ga0495629_0041091 Ga0495629_0041091_239_1888 482
44 3300046674 Ga0495588_0015567 Ga0495588_0015567_406_2055 482
45 3300046689 Ga0495613_0021968 Ga0495613_0021968_2656_4257 482
46 3300047321 Ga0495676_0027992 Ga0495676_0027992_858_2459 482
47 iso_pu_bacteria 2751185782 2753268001 482
48 3300006048 Ga0075363_100030625 Ga0075363_1000306252 483
49 3300046794 Ga0495589_0003578 Ga0495589_0003578_5786_7426 483
50 3300047447 Ga0495685_003463 Ga0495685_003463_831_2471 483
51 3300030522 Ga0307512_10053973 Ga0307512_100539732 484
52 3300031616 Ga0307508_10001661 Ga0307508_1000166114 484
53 3300041512 Ga0451853_1754207 Ga0451853_1754207_6746_8356 484
54 3300042014 Ga0439457_006322 Ga0439457_006322_416_2014 484
55 3300042131 Ga0450894_001808 Ga0450894_001808_41_1651 484
56 3300042133 Ga0450896_000322 Ga0450896_000322_2963_4561 484
57 3300042134 Ga0450898_000732 Ga0450898_000732_335_1933 484
58 3300042145 Ga0450906_001192 Ga0450906_001192_4079_5677 484
59 3300046455 Ga0495603_0019807 Ga0495603_0019807_1975_3615 484
60 3300053140 Ga0500573_0013245 Ga0500573_0013245_856_2526 484
61 3300033180 Ga0307510_10050929 Ga0307510_100509292 485
62 3300005614 Ga0068856_100203569 Ga0068856_1002035692 487
63 3300025904 Ga0207647_10014806 Ga0207647_100148062 487
64 3300031838 Ga0307518_10071900 Ga0307518_100719001 487
65 3300047443 Ga0495687_001692 Ga0495687_001692_1093_2781 489
66 iso_pu_bacteria 8008574985 8008581123 489
67 iso_pu_bacteria 8056829672 8056832676 489
68 3300037466 Ga0395898_0020297 Ga0395898_0020297_3037_4623 490
69 iso_pu_bacteria 2582581313 2585306613 490
70 iso_pu_bacteria 2643221647 2644263478 490
71 iso_pu_bacteria 2786546132 2786667772 490
72 iso_pu_bacteria 2808606375 2808918021 491
73 iso_pu_bacteria 2811994879 2812360665 491
74 3300031507 Ga0307509_10099118 Ga0307509_100991183 492
75 iso_pu_bacteria 2643221678 2644442139 492
76 iso_pu_bacteria 2784746768 2785366715 492
77 iso_pu_bacteria 2808606359 2808847213 492
78 iso_pu_bacteria 2877676314 2877683826 492
79 iso_pu_bacteria 2954002825 2954008572 492
80 3300028786 Ga0307517_10001103 Ga0307517_100011039 493
81 3300028794 Ga0307515_10000524 Ga0307515_1000052424 493
82 3300028794 Ga0307515_10062398 Ga0307515_100623982 493
83 3300031456 Ga0307513_10042523 Ga0307513_100425232 493
84 3300031507 Ga0307509_10136936 Ga0307509_101369362 493
85 3300033179 Ga0307507_10037996 Ga0307507_100379963 493
86 3300033180 Ga0307510_10026301 Ga0307510_100263012 493
87 3300038443 Ga0395901_0027345 Ga0395901_0027345_3885_5471 493
88 3300044719 Ga0466971_0035680 Ga0466971_0035680_611_2203 493
89 3300045049 Ga0466959_0101462 Ga0466959_0101462_79_1671 493
90 3300046660 Ga0495625_0002537 Ga0495625_0002537_2629_4272 493
91 3300047470 Ga0495681_0002334 Ga0495681_0002334_5644_7287 493
92 3300049570 Ga0501033_0025822 Ga0501033_0025822_106_1698 493
93 3300053107 Ga0500560_001012 Ga0500560_001012_1680_3323 493
94 iso_pu_bacteria 2582581314 2585317382 493
95 3300015688 Ga0183367_1003 Ga0183367_1003258 494
96 3300030522 Ga0307512_10042687 Ga0307512_100426872 494
97 3300046499 Ga0495594_0016765 Ga0495594_0016765_1137_2759 494
98 3300046533 Ga0495640_0008739 Ga0495640_0008739_3377_5122 494
99 3300046675 Ga0495657_0015712 Ga0495657_0015712_3607_5352 494
100 3300047673 Ga0495593_0040985 Ga0495593_0040985_21_1766 494
101 iso_pu_bacteria 2867428634 2867431450 494
102 iso_pu_bacteria 2912723979 2912726553 494
103 iso_pu_bacteria 2954380949 2954389130 494
104 iso_pu_bacteria 2954673503 2954673912 494
105 iso_pu_bacteria 2954682443 2954690079 494
106 iso_pu_bacteria 2954691527 2954699878 494
107 iso_pu_bacteria 2954701450 2954702320 494
108 iso_pu_bacteria 2954711539 2954718761 494
109 iso_pu_bacteria 2954721474 2954728731 494
110 iso_pu_bacteria 2954731030 2954733079 494
111 iso_pu_bacteria 2954740390 2954747629 494
112 iso_pu_bacteria 2954749733 2954751960 494
113 iso_pu_bacteria 2954759201 2954766745 494
114 3300030522 Ga0307512_10008907 Ga0307512_100089073 496
115 3300031616 Ga0307508_10088288 Ga0307508_100882882 496
116 3300044901 Ga0466960_0036383 Ga0466960_0036383_519_2102 496
117 iso_pu_bacteria 2554235005 2554259837 496
118 iso_pu_bacteria 2784746763 2785346227 496
119 iso_pu_bacteria 2862281513 2862290088 496
120 iso_pu_bacteria 8054160619 8054164525 496
121 iso_pu_bacteria 8056667051 8056670330 496
122 3300030521 Ga0307511_10000334 Ga0307511_1000033436 497
123 3300031730 Ga0307516_10026261 Ga0307516_100262613 497
124 3300033180 Ga0307510_10024475 Ga0307510_100244752 497
125 3300046462 Ga0495651_0001693 Ga0495651_0001693_8263_9864 497
126 3300046473 Ga0495582_0019899 Ga0495582_0019899_1056_2657 497
127 3300046476 Ga0495662_0000551 Ga0495662_0000551_4331_5932 497
128 3300046477 Ga0495664_0004678 Ga0495664_0004678_4230_5831 497
129 3300046514 Ga0495618_0008513 Ga0495618_0008513_1150_2751 497
130 3300046536 Ga0495587_0001028 Ga0495587_0001028_7926_9527 497
131 3300046663 Ga0495635_0065467 Ga0495635_0065467_836_2437 497
132 3300046689 Ga0495613_0001398 Ga0495613_0001398_5558_7159 497
133 3300047317 Ga0495604_0000673 Ga0495604_0000673_6361_7962 497
134 3300047319 Ga0495674_0127088 Ga0495674_0127088_213_1814 497
135 3300047321 Ga0495676_0002663 Ga0495676_0002663_1591_3192 497
136 3300047443 Ga0495687_001226 Ga0495687_001226_10932_12533 497
137 3300047673 Ga0495593_0003505 Ga0495593_0003505_4442_6043 497
138 3300048089 Ga0495614_0002396 Ga0495614_0002396_6613_8214 497
139 iso_pu_bacteria 2947224130 2947232216 497
140 iso_pu_bacteria 8025478263 8025478354 497
141 iso_pu_bacteria 8056447290 8056451964 497
142 3300046499 Ga0495594_0004684 Ga0495594_0004684_429_2036 498
143 3300046507 Ga0495606_0009196 Ga0495606_0009196_5031_6638 498
144 3300046526 Ga0495666_0032731 Ga0495666_0032731_722_2329 498
145 3300046794 Ga0495589_0071196 Ga0495589_0071196_26_1633 498
146 3300047321 Ga0495676_0002857 Ga0495676_0002857_3068_4675 498
147 3300049459 Ga0495678_016726 Ga0495678_016726_998_2605 498
148 iso_pu_bacteria 2862178590 2862181285 498
149 iso_pu_bacteria 2643221587 2643942525 499
150 iso_pu_bacteria 2643221670 2644386088 499
151 iso_pu_bacteria 2643221677 2644429984 499
152 iso_pu_bacteria 2918501144 2918502221 499
153 3300031649 Ga0307514_10035199 Ga0307514_100351992 500
154 iso_pu_bacteria 2863404153 2863407653 500
155 iso_pu_bacteria 2990059506 2990064472 500
156 iso_pu_bacteria 2862382967 2862387407 502
157 iso_pu_bacteria 8008558824 8008560831 502
158 iso_pu_bacteria 2873151551 2873158123 504
159 3300003316 rootH1_10005381 rootH1_100053814 507
160 3300003320 rootH2_10022413 rootH2_100224134 507
161 3300003322 rootL2_10003630 rootL2_100036302 507

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12222

PNGaseA

Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A

91

499

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4r4x-assembly1.cif.gz_A structure of pngf-ii in c2 space group 0.6273 47 331
4r4z-assembly4.cif.gz_D structure of pngf-ii in p21 space group 0.6119 47 331
4oul-assembly1.cif.gz_C crystal structure of human caprin-2 c1q domain 0.5981 65 167
7zgn-assembly1.cif.gz_B plant/insect n-glycan active pngase 0.5762 47 328
5wvp-assembly1.cif.gz_A expression, characterization and crystal structure of a novel beta-glucosidase from paenibacillus barengoltzii 0.5743 46 162
ID Description Score Start End Superfamily
af_I1LST9_54_480_2.60.120.1540 Mainly Beta;Sandwich;Jelly Rolls; 0.8157 37 457 2.60.120.1540
af_I1LST9_54_480_2.60.120.1540 Mainly Beta;Sandwich;Jelly Rolls; 0.803 37 457 2.60.120.1540
af_B4G227_55_500_2.60.120.40 Mainly Beta;Sandwich;Jelly Rolls; 0.7845 38 457 2.60.120.40
af_Q9FFG6_52_487_2.60.120.230 Mainly Beta;Sandwich;Jelly Rolls; 0.7473 40 457 2.60.120.230
af_B4G227_55_500_2.60.120.40 Mainly Beta;Sandwich;Jelly Rolls; 0.7398 38 457 2.60.120.40
ID Description Score Start End GO Terms
AF-A0A3R9VVH8-F1-model_v4 deleted 0.9177 34 355
AF-A0A3R9VVH8-F1-model_v4 deleted 0.915 34 355
AF-A0A2N5TGS4-F1-model_v4 Uncharacterized protein 0.9081 50 170
AF-A0A6B1PCX2-F1-model_v4 deleted 0.8658 1 423
AF-A0A6B1PCX2-F1-model_v4 deleted 0.8441 1 423

Feature Viewer

pLDDT pTM Quality
78.72 0.78 High
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Predicted Structure (AlphaFold2)

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